Metagenome Family F100341

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100341
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	47 residues
Representative Sequence	VQILVLIGLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKIDF
Number of Associated Samples	29
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.00 %
% of genes near scaffold ends (potentially truncated)	82.35 %
% of genes from short scaffolds (< 2000 bps)	85.29 %
Associated GOLD sequencing projects	19
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (93.137 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont (75.490 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.90% β-sheet: 0.00% Coil/Unstructured: 41.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00005	ABC_tran	0.98
PF02709	Glyco_transf_7C	0.98
PF07714	PK_Tyr_Ser-Thr	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
All Organisms	root	All Organisms	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
cellular organisms	root	All Organisms → cellular organisms	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	5.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.88 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.88 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.88 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.88 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.88 %
Candidatus Nephrothrix	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Candidatus Nephrothrix	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.88 %
unclassified Candidatus Nephrothrix	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Candidatus Nephrothrix → unclassified Candidatus Nephrothrix	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.88 %
Candidatus Nephrothrix sp. EaCA	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Candidatus Nephrothrix → unclassified Candidatus Nephrothrix → Candidatus Nephrothrix sp. EaCA	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001734\|JGI24668J20090_10206253	Not Available	560	Open in IMG/M
3300001734\|JGI24668J20090_10220843	Not Available	543	Open in IMG/M
3300001734\|JGI24668J20090_10228980	Not Available	534	Open in IMG/M
3300001734\|JGI24668J20090_10251914	Not Available	510	Open in IMG/M
3300001741\|JGI24671J20093_10090446	Not Available	718	Open in IMG/M
3300001741\|JGI24671J20093_10102063	Not Available	687	Open in IMG/M
3300001741\|JGI24671J20093_10114930	Not Available	656	Open in IMG/M
3300001741\|JGI24671J20093_10225380	Not Available	500	Open in IMG/M
3300001742\|JGI24673J20094_10125866	Not Available	700	Open in IMG/M
3300001742\|JGI24673J20094_10165801	Not Available	624	Open in IMG/M
3300001744\|JGI24669J20092_10015908	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1217	Open in IMG/M
3300001744\|JGI24669J20092_10019768	Not Available	1120	Open in IMG/M
3300001744\|JGI24669J20092_10044165	Not Available	837	Open in IMG/M
3300001744\|JGI24669J20092_10110064	Not Available	603	Open in IMG/M
3300001744\|JGI24669J20092_10156777	Not Available	528	Open in IMG/M
3300001746\|JGI24672J20091_10131041	Not Available	565	Open in IMG/M
3300001746\|JGI24672J20091_10159388	Not Available	525	Open in IMG/M
3300002181\|JGI24670J26820_11186557	Not Available	509	Open in IMG/M
3300002181\|JGI24670J26820_11206494	Not Available	521	Open in IMG/M
3300002181\|JGI24670J26820_11341340	Not Available	628	Open in IMG/M
3300003801\|Ga0056138_1030015	Not Available	685	Open in IMG/M
3300003810\|Ga0056113_1010073	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1028	Open in IMG/M
3300003810\|Ga0056113_1038460	Not Available	623	Open in IMG/M
3300003985\|Ga0056112_1049709	Not Available	624	Open in IMG/M
3300004086\|Ga0066191_10234562	Not Available	655	Open in IMG/M
3300004098\|Ga0065184_10025747	Not Available	1967	Open in IMG/M
3300004144\|Ga0066189_10156430	Not Available	769	Open in IMG/M
3300004632\|Ga0049107_10140117	Not Available	1707	Open in IMG/M
3300004632\|Ga0049107_10142252	Not Available	1692	Open in IMG/M
3300004632\|Ga0049107_10166760	Not Available	1539	Open in IMG/M
3300004632\|Ga0049107_10217655	Not Available	1288	Open in IMG/M
3300004632\|Ga0049107_10221066	Not Available	1274	Open in IMG/M
3300004632\|Ga0049107_10261927	Not Available	1124	Open in IMG/M
3300004632\|Ga0049107_10307323	Not Available	989	Open in IMG/M
3300004632\|Ga0049107_10320414	Not Available	956	Open in IMG/M
3300004632\|Ga0049107_10339405	Not Available	910	Open in IMG/M
3300004632\|Ga0049107_10353348	Not Available	879	Open in IMG/M
3300004632\|Ga0049107_10365843	Not Available	852	Open in IMG/M
3300004632\|Ga0049107_10367653	Not Available	848	Open in IMG/M
3300004632\|Ga0049107_10391621	Not Available	801	Open in IMG/M
3300004632\|Ga0049107_10463351	Not Available	685	Open in IMG/M
3300004632\|Ga0049107_10495229	Not Available	643	Open in IMG/M
3300004632\|Ga0049107_10505102	Not Available	631	Open in IMG/M
3300004632\|Ga0049107_10507542	Not Available	628	Open in IMG/M
3300004632\|Ga0049107_10527727	Not Available	605	Open in IMG/M
3300004632\|Ga0049107_10544629	All Organisms → cellular organisms → Eukaryota → Opisthokonta	587	Open in IMG/M
3300004632\|Ga0049107_10557609	Not Available	574	Open in IMG/M
3300004632\|Ga0049107_10558648	Not Available	573	Open in IMG/M
3300004632\|Ga0049107_10590244	Not Available	544	Open in IMG/M
3300004632\|Ga0049107_10600758	Not Available	535	Open in IMG/M
3300004632\|Ga0049107_10610698	Not Available	527	Open in IMG/M
3300004632\|Ga0049107_10613038	Not Available	525	Open in IMG/M
3300005170\|Ga0071327_1100789	Not Available	1898	Open in IMG/M
3300005170\|Ga0071327_1261988	Not Available	813	Open in IMG/M
3300005653\|Ga0056133_10494520	Not Available	598	Open in IMG/M
3300008214\|Ga0056111_1013140	Not Available	669	Open in IMG/M
3300010377\|Ga0126328_10195194	Not Available	1001	Open in IMG/M
3300027338\|Ga0209052_1085852	Not Available	1579	Open in IMG/M
3300027500\|Ga0209145_1000520	All Organisms → cellular organisms → Eukaryota → Opisthokonta	9084	Open in IMG/M
3300027551\|Ga0209338_1259585	Not Available	852	Open in IMG/M
3300027551\|Ga0209338_1283993	Not Available	779	Open in IMG/M
3300027551\|Ga0209338_1376848	Not Available	561	Open in IMG/M
3300027551\|Ga0209338_1384227	Not Available	546	Open in IMG/M
3300027556\|Ga0209743_1264241	Not Available	771	Open in IMG/M
3300027556\|Ga0209743_1289672	Not Available	717	Open in IMG/M
3300027564\|Ga0209428_1112535	Not Available	1425	Open in IMG/M
3300027564\|Ga0209428_1162420	Not Available	1152	Open in IMG/M
3300027564\|Ga0209428_1231521	Not Available	907	Open in IMG/M
3300027564\|Ga0209428_1333692	Not Available	661	Open in IMG/M
3300027564\|Ga0209428_1360515	Not Available	612	Open in IMG/M
3300027564\|Ga0209428_1395370	Not Available	552	Open in IMG/M
3300027584\|Ga0209637_1366082	Not Available	615	Open in IMG/M
3300027599\|Ga0209786_1025733	Not Available	2148	Open in IMG/M
3300027599\|Ga0209786_1107868	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1218	Open in IMG/M
3300027599\|Ga0209786_1212107	Not Available	856	Open in IMG/M
3300027599\|Ga0209786_1255211	All Organisms → cellular organisms → Eukaryota → Opisthokonta	759	Open in IMG/M
3300027599\|Ga0209786_1374132	Not Available	575	Open in IMG/M
3300027613\|Ga0209122_1164515	Not Available	1060	Open in IMG/M
3300027615\|Ga0209678_1005663	Not Available	3816	Open in IMG/M
3300027615\|Ga0209678_1077842	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Candidatus Nephrothrix → unclassified Candidatus Nephrothrix → Candidatus Nephrothrix sp. EaCA	1532	Open in IMG/M
3300027615\|Ga0209678_1153163	Not Available	1102	Open in IMG/M
3300027615\|Ga0209678_1334597	Not Available	667	Open in IMG/M
3300027615\|Ga0209678_1350925	Not Available	643	Open in IMG/M
3300027620\|Ga0209260_10135925	Not Available	752	Open in IMG/M
3300027620\|Ga0209260_10321955	Not Available	522	Open in IMG/M
3300027632\|Ga0209339_1179260	Not Available	1353	Open in IMG/M
3300027632\|Ga0209339_1241252	Not Available	1034	Open in IMG/M
3300027632\|Ga0209339_1289315	Not Available	855	Open in IMG/M
3300027632\|Ga0209339_1345697	Not Available	684	Open in IMG/M
3300027632\|Ga0209339_1369185	Not Available	626	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Annelida	Host-Associated → Annelida	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Annelida → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Annelida → Digestive System → Unclassified	76.47%
Digestive Tube	Host-Associated → Annelida → Digestive System → Digestive Tube	23.53%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Annelida → Digestive System → Unclassified → Unclassified	76.47%
Extracellular Symbionts	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts	23.53%

Habitat	Taxonomy	Distribution
Marine Gutless Worms Symbiont	Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont	75.49%
Marine Gutless Worms Symbiont	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont	23.53%
Marine Gutless Worms	Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001734	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 1	Host-Associated	Open in IMG/M
3300001741	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 1	Host-Associated	Open in IMG/M
3300001742	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 3	Host-Associated	Open in IMG/M
3300001744	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 2	Host-Associated	Open in IMG/M
3300001746	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 2	Host-Associated	Open in IMG/M
3300002181	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 3	Host-Associated	Open in IMG/M
3300003801	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.1	Host-Associated	Open in IMG/M
3300003810	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae ELBA.2	Host-Associated	Open in IMG/M
3300003985	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae ELBA.1	Host-Associated	Open in IMG/M
3300004086	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius tantulus BELIZE.2 (version 2)	Host-Associated	Open in IMG/M
3300004098	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.2 (version 2)	Host-Associated	Open in IMG/M
3300004144	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae PIANOSA.1 (version 2)	Host-Associated	Open in IMG/M
3300004632	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae PIANOSA.1	Host-Associated	Open in IMG/M
3300005170	Worm MetaG Olavius vacuus BAHAMAS.1 (version 1)	Host-Associated	Open in IMG/M
3300005653	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1	Host-Associated	Open in IMG/M
3300008214	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius longissimus B BELIZE.2	Host-Associated	Open in IMG/M
3300010377	Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-13 metaG	Host-Associated	Open in IMG/M
3300027338	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius sp. 4 HERON ISLAND (SPAdes)	Host-Associated	Open in IMG/M
3300027500	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius filocauda PIANOSA.2 (SPAdes)	Host-Associated	Open in IMG/M
3300027540	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type A CAVOLI.1 (SPAdes)	Host-Associated	Open in IMG/M
3300027551	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 1 (SPAdes)	Host-Associated	Open in IMG/M
3300027556	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 2 (SPAdes)	Host-Associated	Open in IMG/M
3300027564	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 1 (SPAdes)	Host-Associated	Open in IMG/M
3300027584	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type G ELBA extract 3 (SPAdes)	Host-Associated	Open in IMG/M
3300027599	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae ELBA.2 (SPAdes)	Host-Associated	Open in IMG/M
3300027613	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 2 (SPAdes)	Host-Associated	Open in IMG/M
3300027615	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius ilvae ELBA.1 (SPAdes)	Host-Associated	Open in IMG/M
3300027620	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius algarvensis Type G CAVOLI (SPAdes)	Host-Associated	Open in IMG/M
3300027632	Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 3 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24668J20090_102062532	3300001734	Marine Gutless Worms Symbiont	LVLIGLYFLKCTKFDQLILRKIINIVASRCQILTLKCTQIDFG
JGI24668J20090_102208431	3300001734	Marine Gutless Worms Symbiont	VVDRGLYFLKCTKFDQLILRKLIKIVATRCQILTLKCTKIDFGF
JGI24668J20090_102289801	3300001734	Marine Gutless Worms Symbiont	MTLTKMWVPICLYCSNCTKFGQLILRXIIKIVATRCQILRLKCTKFXXGWGSAPDPTA
JGI24668J20090_102519142	3300001734	Marine Gutless Worms Symbiont	VQILVLIGIYFLKCTKFDQLILRKIIKIVATRCQILTLKCTEIDFGWGS
JGI24671J20093_100904461	3300001741	Marine Gutless Worms Symbiont	MSLTKMWVPICLYCSNCTKFGQLILRKIIKIVAARCQILRL
JGI24671J20093_101020631	3300001741	Marine Gutless Worms Symbiont	MTLTKMWVPICLYYSNCTKFGQLILRKIIKIVATRCQILR
JGI24671J20093_101149302	3300001741	Marine Gutless Worms Symbiont	MTLTKMWVPIYLYCSNCTKFGQLILRKIIKIVATRCKILRLKCTKFAFV
JGI24671J20093_102253801	3300001741	Marine Gutless Worms Symbiont	MWVPICLYCSNCTKFGQLILRKIIKIVATRCQILRLKCTKFNFGWGFASDP
JGI24673J20094_101258662	3300001742	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLNELILRKIIKIVAIRCQILTLKCTKIDSGWGSA
JGI24673J20094_101658011	3300001742	Marine Gutless Worms Symbiont	MTLTKMWVPICLYCLNCTKFGQLILRKIIKIVATRCQILRLKCTKFDFGWGSPLGEL
JGI24669J20092_100159082	3300001744	Marine Gutless Worms Symbiont	MPILVLIGLYFLKCTKFDQLILRKIIKIVATICQILTLKC
JGI24669J20092_100197681	3300001744	Marine Gutless Worms Symbiont	VQILVLIGLYILKCTKFDQLIFRKIIKIVATRCQILTLKRTKIDFGWGS
JGI24669J20092_100441652	3300001744	Marine Gutless Worms Symbiont	VQILFLIGLYFLKCTKFDQLILRKIIKIVATRFQILTL*
JGI24669J20092_101100641	3300001744	Marine Gutless Worms Symbiont	MWVSICLYCSNCTKFGQLILRKIIKIVATRCQILRLKCTKFDFGW
JGI24669J20092_101567772	3300001744	Marine Gutless Worms Symbiont	MVDRGLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKIDFGWGSAPD
JGI24672J20091_101310412	3300001746	Marine Gutless Worms Symbiont	VQILVLIGIYFLKCTKFDQLILRKIIKIVATRCQILTLKCTEIDF
JGI24672J20091_101593881	3300001746	Marine Gutless Worms Symbiont	LVLIGLYFLKCTKFGQLILIKIIKVATRCQILTLKCSKIDFG
JGI24670J26820_111865571	3300002181	Marine Gutless Worms Symbiont	VQILVLIGLCFLKCTKFDQLILRKTIKIVTTRRQLLMLKCTKIDFGWGSS
JGI24670J26820_112064941	3300002181	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLILRKIIKIVATRCQI
JGI24670J26820_113413402	3300002181	Marine Gutless Worms Symbiont	MTLTKMWVPICLYCSNCTKFGQLILSKIIKIVATRCQILRLKCTKFDF
Ga0056138_10300151	3300003801	Marine Gutless Worms Symbiont	MTLKKMWVPICLYCSNCTKFVQLILRKIIKIVATRCQILRLKCTKFDFGW
Ga0056113_10100733	3300003810	Marine Gutless Worms Symbiont	VQILVLIGLYLLKCTKFVQLILRKITKIVVTRCQILTLKCTKIDFGWGSAPDP
Ga0056113_10384601	3300003810	Marine Gutless Worms Symbiont	MVPICLYCLNCTKFGQLILRKIIKIVATRCQILRLKCTKFD
Ga0056112_10497091	3300003985	Marine Gutless Worms Symbiont	LVLIGLYILKCTKFDQLIFRKIIKIVATRCQILTLKCTKIDF
Ga0066191_102345622	3300004086	Marine Gutless Worms Symbiont	VDTPRICLYCLKCTKSGKLIPRKIIKIVATTYHISSSKCTKFDFGWGSAPDP
Ga0065184_100257471	3300004098	Marine Gutless Worms Symbiont	MGCVKMNKKRMVPICLYCLNCTKYGQLILGKNIKTVVTRCQILRLKCTKFD
Ga0065184_102300811	3300004098	Marine Gutless Worms Symbiont	MTLTKNLVPICFYCLKCTKFGQLILSKINKIVDTRCQILRLKCTKFDFADPLAGFKGAYF
Ga0066189_101564302	3300004144	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLVLGKSVTKFATRCQVLTLKCTEIDFGWGSA
Ga0049107_100205821	3300004632	Marine Gutless Worms Symbiont	LPNYKYMKNMICLYCLNCTKFGQLILRKIIKIVATRCQILRLKCTKFDFG
Ga0049107_100814863	3300004632	Marine Gutless Worms Symbiont	MSKYTGSCAGPVCLYCLNCTKFDPLILRKIIKIVATRCQILRLKCTKFDFRWGSAPDP
Ga0049107_100925634	3300004632	Marine Gutless Worms Symbiont	KCTKFDQLILRKIIKIVATRCQILTLKCTKIDFGWGSAPDTAGGAYSAPETPSWI*
Ga0049107_101401171	3300004632	Marine Gutless Worms Symbiont	MLVPICLYCLSCTEFGQLIVRKIMKIITARCQILRLKCTKFDF
Ga0049107_101422523	3300004632	Marine Gutless Worms Symbiont	VQILVLIGLYLLKCTKFDQLILRKIIKIVATRCQILTLKCTKIDF
Ga0049107_101667602	3300004632	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTEFDQLILRKIIKIVATRCQILTLKCTKIDF
Ga0049107_102176553	3300004632	Marine Gutless Worms Symbiont	VVQILVPIGLYFLKCTKFDQLILRKIIKIVATRCQILTLKST*
Ga0049107_102210661	3300004632	Marine Gutless Worms Symbiont	VQILVPIGLYFIKCTKFDQLILRKIIKIVATRCQILTLKCTKI
Ga0049107_102619271	3300004632	Marine Gutless Worms Symbiont	VQIVVLIGLYFLKCTKFDQLILRKTIKIVATRCQILTLKCTKIDFG*
Ga0049107_103073231	3300004632	Marine Gutless Worms Symbiont	GLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKIDFG*
Ga0049107_103204143	3300004632	Marine Gutless Worms Symbiont	GLYILKCTKFDQLIFRKIIKIVATRCQILTLKCTKFDFG*
Ga0049107_103394051	3300004632	Marine Gutless Worms Symbiont	LTSVVLQVVQILVLIGLYFLKCTEFDQLILRKIIKIVATKCQILMLKCTKIDFG*
Ga0049107_103533483	3300004632	Marine Gutless Worms Symbiont	VQILPILVLIGLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTK
Ga0049107_103658431	3300004632	Marine Gutless Worms Symbiont	VPLVVQILVLIVLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKIDFGW
Ga0049107_103676531	3300004632	Marine Gutless Worms Symbiont	GLYFLKCTKFDQLILRKIIKIVATRCQILTLKFTKIDFGWGSAPDPAG*
Ga0049107_103916211	3300004632	Marine Gutless Worms Symbiont	LVRIGLYFLKCTKFYQLILRKIIKIVATRCQILTLKCTKIDFGWGS
Ga0049107_104211551	3300004632	Marine Gutless Worms Symbiont	VQILVLSSLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKFDFGWGSAPDPA
Ga0049107_104488762	3300004632	Marine Gutless Worms Symbiont	VQILVLISLYFLKCTKFDQLILRKIVATRCQILRLKCTKFDFILL
Ga0049107_104633511	3300004632	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLILGKIIKIVATRCQILTLKCTKIDFG
Ga0049107_104952291	3300004632	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLIFGKIIKIVATRCQILTLKCTKIDFG*
Ga0049107_105051021	3300004632	Marine Gutless Worms Symbiont	LVLIGLYFLKCTKFDQLIFRKIIKIVATRCQILTLKCTKIDFGWG
Ga0049107_105075422	3300004632	Marine Gutless Worms Symbiont	VQILVPIGLYFLKCTKFDQLILRKVIKIVATRCQILTLKCTKI
Ga0049107_105277271	3300004632	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFNQLIFRKIIKIVATRCQILTLKCTKIDFGRGSAADPLGEL
Ga0049107_105446292	3300004632	Marine Gutless Worms Symbiont	VQILALIGLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKID
Ga0049107_105576091	3300004632	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTRFDQLILRKIIKIVATRCQILTLKCTKIDFG
Ga0049107_105586481	3300004632	Marine Gutless Worms Symbiont	MTGLYFLKCTRFDQLILRKIIKIVATRCQILTLKCTKIDFG
Ga0049107_105902441	3300004632	Marine Gutless Worms Symbiont	RLVVQILVLIGLYFLKCTKFDQLILRKIIKIVATRCQILWIK*
Ga0049107_106007581	3300004632	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKI
Ga0049107_106106981	3300004632	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKIDF
Ga0049107_106130381	3300004632	Marine Gutless Worms Symbiont	VQILVLIGLYILKCTKFDQLIFRKIIKIVATRCQILTLKRTKIDFGWGSAPDPA
Ga0071327_11007893	3300005170	Marine Gutless Worms Symbiont	VTLTKISVLICLYFLKYRKFDQLILRKIIKIVATRCQILKLKCTK
Ga0071327_12619882	3300005170	Marine Gutless Worms Symbiont	MLVLICLYYSKCTTFNQLILRKIIKIVATRCQILRLKCTKFDFGWGSAPDP
Ga0056133_104945202	3300005653	Marine Gutless Worms Symbiont	MVPICLYCLNCRKFGQLIFSRIIETVASRCQILRLKCTKFDFGWG
Ga0056111_10131401	3300008214	Marine Gutless Worms Symbiont	MLVPICLYCLKCTKFGQLIPRKIIKIVATRCQILRLKCTKFDFSWG
Ga0126328_101951942	3300010377	Marine Gutless Worms	MTLTNILVPICLYSLKWTKFGQLILGKIIKIVAASCHTLRLKC
Ga0209052_10858521	3300027338	Marine Gutless Worms Symbiont	VVAAGFPHIPICHYCLNCTKFGQLILRKIIKIVATRCHILRLK
Ga0209145_100052012	3300027500	Marine Gutless Worms Symbiont	MTLTEILVPICLYCLNCTKFDHLILSKIIKIVATRCQILRLKCTMIMYRLLYI
Ga0209145_11741151	3300027500	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLILRKIVKIVATRCQILTLKCTQIDFGWGFVPDPAG
Ga0209791_13526471	3300027540	Marine Gutless Worms Symbiont	MQILVLISLYFLKCTKFDQLILRKIINIVASRCQILTLKCTQIDFGWG
Ga0209338_12595851	3300027551	Marine Gutless Worms Symbiont	MRVPICLYCSNCTKFGQLILRKIIKIVVTRCQILRLKCTKFDFGW
Ga0209338_12839931	3300027551	Marine Gutless Worms Symbiont	MWVSICLYCSNCTKFGQLILRKIIKIVATRCQILRLKCTKFDFGWGSAPDPAGGAYS
Ga0209338_13768481	3300027551	Marine Gutless Worms Symbiont	MWVPICLYCSNCTKFGQLILRKIIKIVATRCQILRLKCIKFDF
Ga0209338_13842271	3300027551	Marine Gutless Worms Symbiont	MLPIYLYYLNCTKFGQLIPQKIIKIVATRCQILRLKFTKFDFGWGSAPDPAEGAYSAPET
Ga0209743_12642411	3300027556	Marine Gutless Worms Symbiont	MWVSICLYCSNCTKFGQLILRKIIKIVATRCQILRLKCTKFDF
Ga0209743_12896721	3300027556	Marine Gutless Worms Symbiont	MILTKMRVPICLYCSNCTKFGQLILRKIITIVATRCQILKLKCTKFDFGW
Ga0209428_11125352	3300027564	Marine Gutless Worms Symbiont	VKILVLIGLYFLKCTKFDQLILRKIIKIVATRRQILTLKCTKI
Ga0209428_11624201	3300027564	Marine Gutless Worms Symbiont	MIVQILVLIGLNLLKCTKFDQLILRNIIKIVATRCQTLTLKCT
Ga0209428_12315211	3300027564	Marine Gutless Worms Symbiont	MVPICLYCLKCTKFGQLVLAKIIQIVATRCQNLRLKCTKFDVG
Ga0209428_13336921	3300027564	Marine Gutless Worms Symbiont	LVLIGLYFLKCTKFDQLIIRKIIKIVATRCQILTIKGTKIDFGWGSAPD
Ga0209428_13605151	3300027564	Marine Gutless Worms Symbiont	VQSLVLIGLYFLKCTKFDQLILRNRPTIKIVATRCQILTLKCTKIDVS
Ga0209428_13953701	3300027564	Marine Gutless Worms Symbiont	MWVPICLYCSNCTKFGQLILRKIIKIVATRCQILRLKCIKFDFG
Ga0209637_11570331	3300027584	Marine Gutless Worms Symbiont	MLVPICLYCLNCTKFGQLIPRKIIKIVAIRCQILRLKCTKLDFGWCSAPYPAGGAYSVPPDPLAGFKGAYF
Ga0209637_13660821	3300027584	Marine Gutless Worms Symbiont	MTLTKLWVPICLYCSNCTKFGQLILRKIIKIVATKCQILRLKCTKKNAPP
Ga0209786_10257331	3300027599	Marine Gutless Worms Symbiont	MQILVLIGLYFLKCTKFDQLILRKIIKIVATLLHLCTFQILTLKCTKIDF
Ga0209786_11078681	3300027599	Marine Gutless Worms Symbiont	MQILVLIGLYFLKCTEFVQLIFRKIIKIVATRCQILTLKCTQIDF
Ga0209786_12121071	3300027599	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLILRKIIKIVATICQILTLKCTKIFA
Ga0209786_12552111	3300027599	Marine Gutless Worms Symbiont	LVLIGLYSLKCTKFDQLILRKIIKIVATRSQILTLKCTKIDFGWG
Ga0209786_13741321	3300027599	Marine Gutless Worms Symbiont	MLVPICLYYLNCTKFGQLILRKIVKIIATRSQILRLKCTKFDFGWGCGPQ
Ga0209786_14336191	3300027599	Marine Gutless Worms Symbiont	MTLTKNLVPICLYCLNCTKFGQLILMKIIKIVATRCQILRLKCIKFDF
Ga0209122_11645151	3300027613	Marine Gutless Worms Symbiont	MCLYCSNCTKFGQLILRKIIKIVATRCQILRLKCTKFYFGWGFAPDP
Ga0209678_10056633	3300027615	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLIFRKIIKIVATRCQILTLKCTKIDFGWG
Ga0209678_10778421	3300027615	Marine Gutless Worms Symbiont	LVLIGLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKID
Ga0209678_11430951	3300027615	Marine Gutless Worms Symbiont	MWVPICFYCSNCTKFGQLILRKIIKIVATRCQILRLKCTKFDFGWGSA
Ga0209678_11531631	3300027615	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLILRKIIKIIATRCQILTLNCTKIDF
Ga0209678_13345972	3300027615	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLILRKIIKIVATRCQILTLKRTKIDFGRGS
Ga0209678_13509251	3300027615	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTKFDQLILRKIIKIVATKYQIL
Ga0209678_14480901	3300027615	Marine Gutless Worms Symbiont	MWVQICLYCSNCTKFGQLILRKIIKIVATRCQILSLKCTKIDFGWGSAPDPTGGAYS
Ga0209260_101359251	3300027620	Marine Gutless Worms Symbiont	MWVPICLYCSNCTKFGQSILRKIIKIVATRCQILRLKCTKFD
Ga0209260_103219551	3300027620	Marine Gutless Worms Symbiont	MQILVLIGLYFLKCTKFDQLILRKIINIVASRCQILTLKCTQIDFG
Ga0209339_11792602	3300027632	Marine Gutless Worms Symbiont	MILTKMWVPICLYCSNCTKFGQLILRKIITIVATRCQILKLKCTKFDFGW
Ga0209339_12412521	3300027632	Marine Gutless Worms Symbiont	VQILFLVDLYFLKCTKFDQLILRKIIKIVATRCQILTLKCTKID
Ga0209339_12893151	3300027632	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTQFDQLILRKIKTVAIRCQILMLKCIKINLGWGSA
Ga0209339_13456972	3300027632	Marine Gutless Worms Symbiont	VQILVLIGLYFLKCTAFDQLILRKIIKIVATRCQILTLKCTKIDFDWGSA
Ga0209339_13691851	3300027632	Marine Gutless Worms Symbiont	MQILVLIGLYSLKCTKFDQLILRKIIKIVATRCQI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100341

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences