NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F100489

Metagenome Family F100489

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100489
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 149 residues
Representative Sequence MFIISYPYNNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPKLLISELCVTSVTMNQISLTTRLALNEFQASYYSHHRSQSALSETNWPLRLSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRSPGGLT
Number of Associated Samples 8
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 6
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.020 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules
(52.941 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(100.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.11%    β-sheet: 0.00%    Coil/Unstructured: 88.89%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF04572Gb3_synth 3.92
PF00665rve 2.94
PF08284RVP_2 2.94
PF04983RNA_pol_Rpb1_3 1.96
PF13961DUF4219 1.96
PF07727RVT_2 1.96
PF00069Pkinase 1.96
PF07714PK_Tyr_Ser-Thr 1.96
PF14372DUF4413 0.98
PF00078RVT_1 0.98
PF06201PITH 0.98
PF00179UQ_con 0.98
PF04195Transposase_28 0.98
PF00560LRR_1 0.98
PF03492Methyltransf_7 0.98
PF13855LRR_8 0.98
PF00010HLH 0.98
PF01650Peptidase_C13 0.98
PF00197Kunitz_legume 0.98
PF05910DUF868 0.98
PF00931NB-ARC 0.98
PF07690MFS_1 0.98
PF05678VQ 0.98
PF13966zf-RVT 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 15.69
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 2.94
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 2.94
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 2.94
COG4584TransposaseMobilome: prophages, transposons [X] 2.94
COG0086DNA-directed RNA polymerase, beta' subunit/160 kD subunitTranscription [K] 1.96
COG4886Leucine-rich repeat (LRR) proteinTranscription [K] 0.98
COG5078Ubiquitin-protein ligasePosttranslational modification, protein turnover, chaperones [O] 0.98
COG5206Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8Posttranslational modification, protein turnover, chaperones [O] 0.98


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.02 %
All OrganismsrootAll Organisms0.98 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300021320|Ga0214544_1000716All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → NPAAA clade → indigoferoid/millettioid clade → Phaseoleae → Vigna → Vigna unguiculata63669Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Root NodulesHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules52.94%
Root NodulesHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules47.06%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300006943Root nodule microbial communities of legume samples collected from California USA - Cow pea white BWHost-AssociatedOpen in IMG/M
3300006944Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BWHost-AssociatedOpen in IMG/M
3300021320Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3Host-AssociatedOpen in IMG/M
3300021321Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1Host-AssociatedOpen in IMG/M
3300021324Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4Host-AssociatedOpen in IMG/M
3300021327Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2Host-AssociatedOpen in IMG/M
3300027296Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes)Host-AssociatedOpen in IMG/M
3300027357Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0099822_1000631493300006943Root NodulesMHQTVKSVFIISHSYNQPNML*LSINTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLDPELRVTSVTMNQISLTTRLALNGFQASCYSHHRSQSTLSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRSPGGLT*
Ga0099822_100591113300006943Root NodulesSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLDPEPCNTSVMMNQISLTTRLALSEFQASCYSHHKSQFALSETNWPLRVSGCSPYLESLPSYTDGTPPWTPTNRGHGITSRPLKRSPGGLT*
Ga0099822_1006171133300006943Root NodulesLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLISELCVTSVTMNQISLTTRLTLNKFQASCYSHHRSQSALSETNWPLRVSRCSPYLESLLSYTNGAPPWTPTNRGHGITSRPLKRNPESLT*
Ga0099822_1011099143300006943Root NodulesMHYHHPISMYNQACYDSSFNTLRLDSTHLDSYNLVGFSGCLHLWWITLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTN
Ga0099822_101676823300006943Root NodulesMFTISYTHTNQACYDFLGNTLRHDSTHPDKYNLVGFSGCLHLWWIPLLTPELCVTSVSMNQFSLTTRLALNEFQASYYSHHRSQSALSETNRLLRVLGCNPYLESLPSYTDGAPPWTPTIRGHGITS*
Ga0099822_101791493300006943Root NodulesMNRYMGRNPK*THTRITTSPHTDYAAESPLPC*LLEPRPSAPINLIDDHRKKEVPHTRQSHNKQGKLEPTHNYHTVKYIFIISHPYNNQTGHDSSFDTLRLDSTHPDTYNLVEFSGCLHLWWIPLLDPELLDPELCVKSVTMNQISLTTRLVLNEFQASCYSHHRSQSALSETN*PLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGIT
Ga0099822_103333843300006943Root NodulesVHKLRTNRYIGRNPKRTHTGITTSPHTDYVAESPLLADSWNLAHLLPSIIDDHRKKEIPHKGQPYNKQGKLEPTHFHHTVKYSIIIPYPYNNQACHDSSFNTLRLNSTHPDTYNLVGFSMLVLVMDTPVDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSTLSETNW
Ga0099822_103434353300006943Root NodulesPAQTAKRWNHHSLVDHENFAHLLPSTKSMIIARKNSHIQHNHATKRVSYSQQHMHHKVKSIFIISHPNNQPNML*LSIDTLRLDSTHPDTYNLVGFSGCLHL*WIPLLDPELLTPELCVTSVTMNQISLTTRLALDEFQASYYSHHKGQSALSETNWLLRVSG*SPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRNPESLT*
Ga0099822_103474933300006943Root NodulesYNLVGFSGCLHLWWIPLLEPELLTPELCVTNVTMNQFSLTTRLALNEFQASCYSHHRSQSALSETNWLLRVSGYSPYLESLLSYTDGAPPWTPTNMGHGITSRPLKRNPGGLT*
Ga0099822_105263013300006943Root NodulesMFIISPPCNNQTCYDSSLDTLRLDSTHLDTYNLVGFSGCLHLWWIPLLDPELLTPELRVTSVTMNQISLTTRLALNEFQASCYSHHRGQSALSETNWPLRVSRCSPYLESLPSYTDGAPPWTPTNRGH
Ga0099822_105640813300006943Root NodulesYPYNNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPKLLISELCVTSVTMNQISLTTRLALNEFQASYYSHHRSQSALSETNWPLRLSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRSPGGLT*
Ga0099822_107338813300006943Root NodulesNIFNMQSNIFSSSHPHSNQTYYDSSFNTLRLDSTHPDTYNSIGFSGCLHLWWIPLLDPELLDPELCDTSVTMNQISLTTRLALNEFQVSYYSHHRSQSALSETNWPLRVSGCSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPESLT*
Ga0099822_108746113300006943Root NodulesTQGKLEPIIIINSQSYFIIQYPYNNQACYDSSFNTLRLDLTHPDTYNLVGFSGCLHLWWIPLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVTGCSPYLESLPSYTDGAPPWTPTNMGHGITSRPLKRNPESLT*
Ga0099822_108949713300006943Root NodulesNNIIINSQSYFIIQYPYNNQACYDSSFNTLRLDSTHLDTYTLVGFSGCLHLWWIPLLDPELLISELCVTSVTMNQISLTTRLALNAFQASCYSHHKSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNRAMKLRPDH*
Ga0099822_109314213300006943Root NodulesNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLTPKLCVTSVSVNQISLTTRLALNELQASCYSHHKSQSALSETNWLLRVSGCRPYLESLPSYTDGAPPWTPTNRDHGITSRPLKRSPGNLT*
Ga0099822_109535113300006943Root NodulesCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLTPELCVTSVTMNQIPLTTRLTLNEFQASCYSHHRSQSALSETTGSLECQDAVLTKKSLPSYTDGAPPWTPTNRGHGITSKPLKRDPGGLT*
Ga0099822_109697013300006943Root NodulesMYHKVKSIFIISHPNNQPNML*LSINTLRLDSTHLNTYNVVGFSGCLHL*WIPLFDPKLLTPELYVTSVTMNQISLTTRLALNEFQASCYSHHRDQSALSETNWPLRVSGCNPYLESLPSYTDGAPPWTPTNRGHEITSRPLKRNPESLT*
Ga0099822_111536113300006943Root NodulesSHQLN**SSQEEQPHTIQPCNKTGKLEPTHIHHTVKYIIIISHPYNNQACYDSSFNTLRLNSTHPDTYNLVGFSGCLHLWWIPLLDPELLTRELCVTSVTMNQIPLTTRLALNEFQASCYSHHRSQSALSETNWLLRVLGCSPYLESLPSYTDGAPPWTPTNRDHGITSR
Ga0099823_102767013300006944Root NodulesTTQPCNKTGKLEPTHIHHTVEYIFTISYPYNNQTCYESSFNTLRLDSTHPDTYNLVGFSRCLHLWGIPLLEPELLIPELCVTNVTINQFSLATRLALNEFQASCYSHHRIQSALSETNWPLRVSGYNPYLESLLSYTDGAPPWTPTIRGHGITSRQLKRSPEGLT*
Ga0099823_103765713300006944Root NodulesACHDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLTPELLTPELCVTSVTMNQFSLTTRLALNEFQASCYSHHRSQSALSETN*PLRVSGCNPYLESLPSYTDGAPPWAPINKGHGITSRPLKRDPESLTYRLQGIMH*HRSTMFTQPKNIHHA*
Ga0099823_106777023300006944Root NodulesMAKQWNRHSLVDHENLARLLINQIDDHRKEEQPHTTQPCNKTGKQSQQQIHRTVKYIFIISNPYNNQTCYDSSFNTLRLDSTHPDTYNLVGFSGRLHLWWIPLLDPELLTPELCITSVTMNQFSLTTRLALNEFQASCYSHHRSQSALSETNWPIRVSGYSPYLESLLSYTNGAPPWTPTNRGHGITSRPLKRNPESLT*
Ga0099823_108666013300006944Root NodulesMIIARKNSHIQQPCNETGKLEPTHIHHTVKYIFIISYPYNSQTCYDSSFNTLRLNSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSPSALSETNWPLRVSGYSPYLESLLSYTDGAPPWTPTNRGHG
Ga0099823_109468213300006944Root NodulesSQQHMHHTVKYIFIISYSYNNQTCYDSSFNTLRLDSTHPDTYNLWWISLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYPHHRSQSALSETNWPLRVSGCSPYLESLPSYIDGAPPWNYVPTTEAQP*
Ga0099823_110641413300006944Root NodulesMTLNQYTTLDSTHTDTYNLVGFSGCLHLWWIPLLDPELLDPELCDTSVMMNQISRTTRLALNEFQASCYSHHRSQSALSETNWHLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRDPRGLT*
Ga0099823_113468213300006944Root NodulesHPDTYNLVGFSGCLHLWWIPLLDPELLISELCVTSVTMNQISLTTRLALNEFQASYYSHHRSQSALSETNWPLRVLGCSPYLESLPSYTDGAPPWTPTNRDHGITSRPLKRSLGNLT*
Ga0099823_113864623300006944Root NodulesMSATKCVMTLIQYTMTDSTHPDTYNLVGFSGCLRLWWISLLDSELLISELCVTSVPINQISPTTRLALNELQASCYSPHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPP
Ga0099823_114762713300006944Root NodulesSHQLN**SSQEEQPHTIQPCNKTGKLEPTHIHHTVKYIIIISHPYNNQACYDSSFNTLRLNSTHPDTYNLVGFSGCLHLWWIPLLDPELLTRELCVTSVTMNQIPLTTRLALNEFQASCYSHHRSQSALSETNWLLRVLGCSPYLESLPSYTDGAPPWTPTNRDHGITSRPLK
Ga0214544_1000454263300021320Root NodulesMHQTVKSVFIISHSYNQPNMLXLSINTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLDPELRVTSVTMNQISLTTRLALNGFQASCYSHHRSQSTLSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRSPGGLT
Ga0214544_1000716103300021320Root NodulesMHYHHPISMYNQACYDSSFNTLRLDSTHLDSYNLVGFSGCLHLWWITLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRAPESLT
Ga0214544_1000907263300021320Root NodulesMFIISYPYNNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPKLLISELCVTSVTMNQISLTTRLALNEFQASYYSHHRSQSALSETNWPLRLSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRSPGGLT
Ga0214544_1002942193300021320Root NodulesVPTHIHHTVKYIIIIPYPYSNQACHDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLTSYTNGAPPWTPTNRGHGITSRPLKRNPESLT
Ga0214544_1003287223300021320Root NodulesMHYHHPISMYNQDCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLISELCVTSVTMNQISLTTRLALNEFQTSCYSHHRSQSALSETNWPLRVSRCSPYLESLPGYTDGASPWTPTNRGHGITSRPLKRNPESLT
Ga0214544_1005255153300021320Root NodulesMHYHHPIPIYNQACYDSSFNILRLDSTYLDTYNLVGFSGCLHLWSIPLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHKSQSALSETNWPLRVSGCSPYLESLPSYTDGTPPWTPTNRGHGITSRPLKRDPEVPPRDLKEFTR
Ga0214544_100724543300021320Root NodulesMLXLSFNTLXLDSTHPDMYNLVGFSGCLHLWWISLLDSERLISELCVTSVTINQISLTTRLALNKLQAFCYSHHRSQSALSETNWSLRVSRCSPYLESLPGYTDGAPPWAPTNRGHGITSRPLKRDPRGPT
Ga0214544_1007305113300021320Root NodulesMTLPSIHYDSTHPDTYNLVEFSGCLHLWWISLLDPELLISELCVTSVTMKQISLTTRLALNEFQASCYSHHRGQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRDPRGLT
Ga0214544_100733013300021320Root NodulesMNRYMGRNPKXTHTRITTSPHTDYAAESPLPCXLLEPRPSAPINLIDDHRKKEVPHTRQSHNKQGKLEPTHNYHTVKYIFIISHPYNNQTGHDSSFDTLRLDSTHPDTYNLVEFSGCLHLWWIPLLDPELLDPELCVKSVTMNQISLTTRLVLNEFQASCYSHHRSQSALSETNXPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRSPEGLT
Ga0214544_100853183300021320Root NodulesMTVQAIHYDTTQLIRIHITMVGFSGRLHLWWIPLLTPELCVTSVTMNQFSLTTRLALNEFQASCYSHHRSQSALSETNXPLRVSGCNPYLESLPSYTDGAPPWAPINKGHGITSRPLKRDPESLTYRLQGIMHXHRSTMFTQPKNIHHA
Ga0214544_101121213300021320Root NodulesMFIISPPCNNQTCYDSSLDTLRLDSTHLDTYNLVGFSGCLHLWWIPLLDPELLTPELRVTSVTMNQISLTTRLALNEFQASCYSHHRGQSALSETNWPLRVSRCSPYLESLPSYTDGAPPWTPTNRGHG
Ga0214544_101321963300021320Root NodulesMQQTGKLEPTHIHHIVKYIFIISYPYNNQTYYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQPALSETNWSLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNP
Ga0214544_101468133300021320Root NodulesMQQNGQARANTYSSYSQMHYHHPISIYNQAYYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPQLNPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSHCLESLPSYTDGAPPWTPTNRGHGITSRPLKRDPGGLT
Ga0214544_101539573300021320Root NodulesMFTISYTHTNQACYDFLGNTLRHDSTHPDKYNLVGFSGCLHLWWIPLLTPELCVTSVSMNQFSLTTRLALNEFQASYYSHHRSQSALSETNRLLRVLGCNPYLESLPSYTDGAPPWTPTIRGHGITS
Ga0214544_102041323300021320Root NodulesMHHTVKYIFIISYSYNNQTCYDSSFNTLRLDSTHPDTYNLWWISLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYPHHRSQSALSETNWPLRVSGCSPYLESLPSYIDGAPPWNYVPTTEAQP
Ga0214544_102212113300021320Root NodulesRIHHAVKYIFFLISNPHSNQTCYDSSSNTLRLDSTHPDTYNLVGFSGCLHLWWISLLDSELLISELCVTSVTINQISLTTRLALNELQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTNGAPPWAPTNRGHGITSRPLKRSPGGLT
Ga0214544_102547813300021320Root NodulesMHYHHPISIYNQACYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLISELCVTSVTMNQISLTTRLALNEFQASYYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRDPE
Ga0214544_102887513300021320Root NodulesMNQVDDHRKKEEQPQTTQPCNKTGKLEPTHIHHTVEYIFTISYPYNNQTCYESSFNTLRLDSTHPDTYNLVGFSRCLHLWGIPLLEPELLIPELCVTNVTINQFSLATRLALNEFQASCYSHHRIQSALSETNWPLRVSGYNPYLESLLSYTDGAPPWTPTIRGHGITSRQLKRSPEGLT
Ga0214544_103183613300021320Root NodulesMQSNIFSSSHPHSNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLDLWXIPLLDSELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNXPLRVSGCSPYLESLPSYTDGAPPXTPTNRGHGITSRPLKRDPESLA
Ga0214544_103494413300021320Root NodulesYNNPACYDSSFNTLRLDSTHPDTYNLVGFSGRLHLWWIPLLNPELLTPELCVTSVTMNQFSLTTRLALNEFRASCYSHHRSQSALSETNWPLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPESLA
Ga0214544_104299313300021320Root NodulesSTHPDTYNLVGFSGRLHLWWIPLLNPELLTPELCVTSVTMKQFSLTTRLALSEFQASCYSHHRSQSALSETNWPLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPGGLT
Ga0214542_100702813300021321Root NodulesVESPFPCXPRELRPSAPINRVDDHRKKEQPHTTQPCNETGKLKPTHIHHTVKYIFTISYSYNNQTCSDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWISLLTPELLTPELCVTSVSMNQISLTTRLALNELQASCYSHHRSQSALSETNWPLRVSRCSPYLESLPSYTDGAPPWTPTNRGHGIT
Ga0214542_100874133300021321Root NodulesMQSNIFSSSHPHINQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELYVTNVTINQFSLTTRLALNGFQASCYSHHKGQSALSETNWPLRVSGCSPYLESLLSYTDGAPPWAPTNRGHGITSRPLKRNPGGLT
Ga0214542_100957013300021321Root NodulesEQPHTIQPCNKTGKLEPTHIHHTVKYIIIIPYPYSNQACHDSSFNTLRLDSTHPDTYNLVEFSECLHLWWISLLDPKLLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRNPESLT
Ga0214542_1011257153300021321Root NodulesMHYHHPISMYNQDCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLISELCVTSVTMNQISLTTRLALNEFQTSCYSHHRSQSALSETNWPLRVSGCSTYLESLPGYTDGAPPWTPTNRGHGITSRPLKRNPESLT
Ga0214542_101203753300021321Root NodulesMLRLSINTLRLDSTHPDTHNLIGFSGRLHLWWIPLLTLELLTPELSVTSVTMNQISLTTRLTLNEFQASCYSHHRSQSTLSETNWPLRVSGCCPYLESLPSYTDGAPPXTPTNRGHGIMSRPLKRDPESLT
Ga0214542_101226713300021321Root NodulesMHYHHPISMYNQACYDSSFNTLRLDSTHLDSYNLVGFSGCLHLWWITLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAP
Ga0214542_101314563300021321Root NodulesMQQTGKLEPTHIHHIVKYIFIISYPYNNQTYYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQPALSETNWSLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKR
Ga0214542_101695363300021321Root NodulesHAVKYIFLISYPHSNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWXIPLLDSELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWAPTNRGHGITSRPLKRDPRGLT
Ga0214542_101938463300021321Root NodulesGKLEPTHIHHTVKYIIIIPYPYNNQACHDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLIPELCVTSVTMNQISLTTRLALNEFKASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRNPEGLT
Ga0214542_102338513300021321Root NodulesMFTISYTYTNRACYDFSGNTLRHDSTHPDKYNLVGFSGCLHLWWIPLLTPELLTPELCVTSVSMNQFSLTTRLALNEFQASCYSHHRSQSALSETNRFLRVSGCNPYLESLPSYTDGAPSWTPTIKGHGITSRPLKRNPGSLT
Ga0214542_102507713300021321Root NodulesMYHKIKSIFIISHPNNQPNMLXLSINTLRLDSTHPDTYNLVRFSGCLHLWWIPLLDPELLTPELYVTSVTMNQISLTTRLALNEFQASCYSHHRDQSALSETNWPLRVSGCSPYLESLPSYTNGAPPWKPTNRGHGITSRPLKRNPESLT
Ga0214545_1001890123300021324Root NodulesMFIISPPCNNQTCYDSSLDTLRLDSTHLDTYNLVGFSGCLHLWWIPLLDPELLTPELRVTSVTMNQISLTTRLALNEFQASCYSHHRGQSALSETNWPLRVSRCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRNLESLT
Ga0214545_100436113300021324Root NodulesDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLDPEPCNTSVMMNQISLTTRLALSEFQASCYSHHKSQFALSETNWPLRVSGCSPYLESLPSYTDGTPPWTPTNRGHGITSRPLKRSPGGLT
Ga0214545_1005206113300021324Root NodulesQQHIHHAIKYIFIISYPHSNQTCYDSSFNTLRLDSTHPDTYNLVGFSGRSHLWXIPLLDSELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPRAPTNRGHGITSRPLKRDPTGLT
Ga0214545_101329363300021324Root NodulesMQQTGKLEPTHIHHIVKYIFIISYPYNNQTYYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQPALSETNWSLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPESLT
Ga0214545_101616393300021324Root NodulesMFNMQSNIFSSFHSHSNQTCYDSSFNTLRLDSTHPDTYNSVGFSGRLHLWWIPLLDLSCSNLSHVLQVLLXIKISPTTRLALNESQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPXTPTNRGPGITSRPLKRDPGGLT
Ga0214545_101665913300021324Root NodulesQHIHHAVKYIFLISYPHSNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWXIPLLDSELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWAPTNRGHGITSRPLKRDPRGLT
Ga0214545_101884213300021324Root NodulesMYHKVKSIFIISHPNDQPNMLXLSINTLRLDSTHPDTYNLVRFSGCLHLWWIPLLDPELLIPELYVTSVTMNQISLTTRLALNEFQASCYSHHRDQSGLSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNKGHGITSRPLKRNPESLT
Ga0214545_102446613300021324Root NodulesMIIARKNSHIQQPCNETGKLEPTHIHHTVKYIFIISYPYNSQTCYDSSFNTLRLNSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSPSALSETNWPLRVSGYSPYLESLLSYTDGAP
Ga0214545_102969753300021324Root NodulesGKLEPTHIHHTVKYIIIIPYPYNNQACHDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLIPELCVTSVTMNQISLTTRLALNEFNASYYSHHRSQSTLSETNWPLRVSRCSPYLESLPSYTDGAPPWTPTNRGHGITSRPMKRNLKGLT
Ga0214545_103060423300021324Root NodulesRLDSTHPDTYNLVGFSGCLHLWWIPLLDSELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSTLSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNMGHGITSRPLKRNPESLT
Ga0214545_105648213300021324Root NodulesNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTNVTMNQISLTTRLALNEFRASCYSHHRSQSALSETNWPLRVSGYSPYLESLLGYTDGAPPWTPTNRAMGLRPDH
Ga0214545_105893113300021324Root NodulesICIIQSKVFSSSHLHIINQTCYDSHSNTLRLDSTHPDTYNLVGFSGCLHLWWISLLDSELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVLGCSPYLESLPSYTDEAPPWAPTNRGHEITSRPLKRSPRGLT
Ga0214543_1002968153300021327Root NodulesMTPHSIHYDSTHPDTYNLVGFSRCLHLWWISLLDPELLDPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNRAMELRPDH
Ga0214543_100530753300021327Root NodulesMHHKVKSIFVISHPNNQPNMLXLSINTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLTPELCVTSVTMNQISLTTRLALDEFQASCYSHHRGQSALSKTNWPLRVSGCSPYLESLPSYTDGAPPWTPTNKGHGITSRPLKRNPRGLT
Ga0214543_100561213300021327Root NodulesANNIFNMQSNIFSSSHPHINQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELYVTNVTINQFSLTTRLALNGFQASCYSHHRGQSALSETNXPLRVSGCSPYLESLLSYTDGAPPWAPTNRGHGITSRPLKRNPGGLT
Ga0214543_1007972113300021327Root NodulesMNRYMGRNPKXTHTRITTSPHTDYAAESPLPCXLLEPRPSAPINLIDDHRKKEVPHTRQSHNKQGKLEPTHNYHTVKYIFIISHPYNNQTGHDSSFDTLRLDSTHPDTYNLVEFSGCLHLWWIPLLDPELLDPELCVKSVTMNQISLTTRLVLNEFQASCYSHHRSQSALSETNXPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITS
Ga0214543_101135413300021327Root NodulesMLXLSFNTLRLDLTHPDTYNLVEFSGCLHLWWIPLLDSELLISELCVTSVTVNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPWAPTNRGHGITSRPLKRNPESLA
Ga0214543_102200413300021327Root NodulesMIIARKNSHIQQPCNETGKLEPTHIHHTVKYIFIISYPYNSQTCYDSSFNTLRLDSTHPDTYNLVGFSECLHLWWIPLLEPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPESLT
Ga0214543_103207523300021327Root NodulesSNPYNNQTCHNSSFNTLRLDSTHPDTYNLVGFSGRLHLWWIPPLNPELLTPELCVTSVTMKQFSLTTRLALSEFQASCYSHHRSQSALSETNWPLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPGGLT
Ga0214543_103278213300021327Root NodulesMYHKVKSIFIISHPNDQPNMLXLSINTLRLDSTHPDTYNLVRFSGCLHLWWIPLLDPELLIPELYVTSVTMNQISLTTRLALNEFQASCYSHHRDQSGLSETNWPLRVSGCSPYLESLPSYTDGAPPWTPTNKGHGITSR
Ga0214543_104051513300021327Root NodulesGKLEPTHIHHTVKYIFIISYPYNNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTNVTMNQISLTTRLALNEFRASCYSHHRSQSALSETSWPLRVSGYSPYLESLLGYTDGAPPWTPTNRGHGITSRPMKRNPGGLT
Ga0214543_104736413300021327Root NodulesAPINQVDDHRKEEQPHTTQPCNKTGKLEPTHIHHTVKDIFIISYPYNNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTNVTMNQISLTTRLALNEFRASCYSHHRSQSALSETNWPLRVSGYSPYLESLLGYTDGAPPWTPTNRAMGLRPDH
Ga0209389_101748413300027296Root NodulesYNNPACYDSSFNTLRLDSTHPDTYNLVGFSGRLHLWWIPLLNPELLTPKLCVTSVTMNQFSLTTRLALNEFRASCYSHHRSQSALSETNWPLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPESLA
Ga0209389_103882053300027296Root NodulesMHYHHPISIYNQACYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSRCSHYLESLPSYTDGAPPWTPTNRGHGITSRPLKRNPESLT
Ga0209389_104320133300027296Root NodulesPYNNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLDPEPCNTSVMMNQISLTTRLALSEFQASCYSHHKSQFALSETNWPLRVSGCSPYLESLPSYTDGTPPWTPTNRGHGITSRPLKRSPGGLT
Ga0209389_105916823300027296Root NodulesMHQTVKSIFIISHLYNQPNMLXLSINTLRLDSTHPDTYNLVGFNGCLHLWWIPLLDPELLDPELCDTSVMMNQISRTTRLALNEFQASCYSHHRSQSALSETNWHLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRDPRGLT
Ga0209389_106521733300027296Root NodulesMHHTVKYIFIISYSYNNQTCYDSSFNTLRLDSTHPDTYNLWWISLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYPHHRSQSALSETNWPLRVSGCSPYLESLPSYIDGAPPWNYVPTTEAQPXRSHLETPRNLHADTEQHS
Ga0209389_106953923300027296Root NodulesPLPCXPREPRPSAPINQVDDHRKEEQPHTTQPCNKTGKLEPTHTHHTVKYIFIISHPYNNQTCHDSSFNTLRLDSTHPDTYNLVGFSRCLHLWWIPLLEPELLILELCVTNVTMNQFSLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPGGLT
Ga0209389_107151913300027296Root NodulesPINQVDDHRKEEQPHTTQPCNKTGKLEPTHTHHIVKYIFIISYPYKNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLRLWWIPLFDPELLEPELCVTSVTMNQIPLTTRLGLNEFQASCYSHHRSQSALGKTNXPLIVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRDPRGLT
Ga0209389_109997613300027296Root NodulesMIIARKNSHIQQPCNETGKLEPTHIHHTVKYIFIISYPYNSQTCYDSSFNTLRLNSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSPSALSETNWPLRVSGYSPYLESLLS
Ga0209389_110187213300027296Root NodulesNTLRLDSTHPDTYNLVGFSRCLHLWGIPLLEPELLIPELCVTNVTINQFSLATRLALNEFQASCYSHHRIQSALSETNWPLRVSGYNPYLESLLSYTDGAPPWTPTIRGHGITSRQLKRSPEGLT
Ga0209389_110385013300027296Root NodulesNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHKIQSALSETNWPLRVSGYNPYLESLLSYTDGAPP
Ga0209389_112369413300027296Root NodulesMFIISPPCNNQTCYDSSLDTLRLDSTHLDTYNLVGFSGCLHLWWIPLLDPELLTPELRVTSVTMNQISLTTRLALNEFQASCYSHHRGQSALSETNWPLRVSRCSPYLESLPSYTDG
Ga0209389_112442413300027296Root NodulesPHKGQPYNKQGKLEPTHFHHTVKYSIIIPYPYNNQACHDSSFNTLRLNSTHPDTYNLVGFSGCLYLXWIPLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSTLSETNWPLRVSGCSPYLDSLPSYTDGAPPWTPTNRVHGIMSRPLKRDPRCLT
Ga0209389_113324723300027296Root NodulesMHYHHPISMYNQACYDSSFNTLRLDSTHLDSYNLVGFSGCLHLWWITLLDPELLISELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGCSPYLESLPSYTD
Ga0209589_100847483300027357Root NodulesRVDDHRKKEEPHTRQPYNKQGKLEPTHSYHTVNYIIIIPYPYSNQACHDSSFDTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTSVTINQFSLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGYSPYLESLLNYTDGTPPWTPTNRGHGITSRPLKRNPGGLT
Ga0209589_101488923300027357Root NodulesMPKGTRGKEKKTRVHKLRMNRYMGRNPKXTHTRITTSPHTDYAAESPLPCXLLEPRPSAPINLIDDHRKKEVPHTRQSHNKQGKLEPTHNYHTVKYIFIISHPYNNQTGHDSSFDTLRLDSTHPDTYNLVEFSGCLHLWWIPLLDPELLDPELCVKSVTMNQISLTTRLVLNEFQASCYSHHRSQSALSETNXPLRVSGCSPYLESLPSYTDGAPPWTPTNRGHGITSRPLKRSPEGLT
Ga0209589_103385413300027357Root NodulesMQSKYIFIIPYSYNQPNVLXLSFNTLRLDSTHPDTYNLVGFSGCLRLWWISLLDSELLISELCVTSVPINQISLTTRLALNEIQASCYSPHRSQSALSETNWPLRVSGCSPYLESLPSYTDGAPPXAPTNRGHGITSRPLKRDPRGLT
Ga0209589_104607213300027357Root NodulesPYNNQACHDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLDPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSEINWHLRVSGCSPYLESLPSYTDGAPPWTPTNKGHGITSRPLKRNPEGLT
Ga0209589_105167913300027357Root NodulesTCNETGKLEPINIFNMQSNIFSSSHPHSNQTYYDSSFNTLRLDSTHPDTYNSIGFSGCLHLWWIPLLDPELLDPELCDTSVTMNQISLTTRLALNEFQVSYYSHHRSQSALSETNWPLRVSGCSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPESLT
Ga0209589_105256613300027357Root NodulesIFIISYPYNNQTCYDSSFNTLRLDSTHPDTYNLVGFSGCLHLWWIPLLEPELLIPELCVTNVTMNQISLTTRLALNEFRASCYSHHRSQSALSETSWPLKVSGYSPYLESLLGYTDGAPPWTPTNRGHGITSRPLKRNLGGLT
Ga0209589_105322523300027357Root NodulesQGNQTSKGKLEPKRFYHAIRYTFTVQYAYIIQACYDLPINTLRLDSTHPDTYNLVGFSGCLHLWWIPLLTPELLTPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPFRVSGCSPYLESLPSYTDGAPPWAPTNRGHGITSRPLKRNPRGLT
Ga0209589_106721013300027357Root NodulesQPCNETGKLEPTHIHHTVKYIFIISYPYNSQTCYDSSFNTLRLDSTHPDTYNLVGFSECLHLWWIPLLEPELLIPELCVTSVTMNQISLTTRLALNEFQASCYSHHRSQSALSETNWPLRVSGYSPYLESLLSYTDGAPPWTPTNRGHGITSRPLKRNPESLT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.