Metagenome / Metatranscriptome Family F100529

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100529
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	105 residues
Representative Sequence	MLVPLETLSGWPAVENPTALQSLLLFVGFPILVFLIVIAINKIVQTIHTTRGDDPRTRDPLYLVDARTGEAKLVEANPGTDLGQQALVGSGEVEGDDTGEHVGGAGARW
Number of Associated Samples	94
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.00 %
% of genes near scaffold ends (potentially truncated)	41.18 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.196 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.294 % of family members)
Environment Ontology (ENVO)	Unclassified (28.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.157 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.61% β-sheet: 13.76% Coil/Unstructured: 59.63%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF17174	DUF5130	22.55
PF00156	Pribosyltran	18.63
PF02502	LacAB_rpiB	16.67
PF02729	OTCace_N	3.92
PF04536	TPM_phosphatase	2.94
PF06831	H2TH	1.96
PF12697	Abhydrolase_6	0.98
PF00120	Gln-synt_C	0.98
PF04456	DUF503	0.98
PF01979	Amidohydro_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	16.67
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	1.96
COG1550	Stress-induced protein YlxP, DUF503 family	Function unknown [S]	0.98

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.24 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.24 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	87.25 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	83.33 %
Unclassified	root	N/A	9.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %

Name	Rank	Taxonomy	Distribution
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	45.10 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	24.51 %
Unclassified	root	N/A	9.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %

Name	Rank	Taxonomy	Distribution
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	40.20 %
Unclassified	root	N/A	9.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	1.96 %
Propionicicella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Propionicicella	0.98 %

Name	Rank	Taxonomy	Distribution
Friedmanniella luteola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	35.29 %
Unclassified	root	N/A	9.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	1.96 %
Propionicicella superfundia	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Propionicicella → Propionicicella superfundia	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12561152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	505	Open in IMG/M
3300000956\|JGI10216J12902_109217581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	962	Open in IMG/M
3300004463\|Ga0063356_101959247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	885	Open in IMG/M
3300004803\|Ga0058862_12413702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	602	Open in IMG/M
3300005093\|Ga0062594_103194636	Not Available	513	Open in IMG/M
3300005328\|Ga0070676_11442479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Propionicicella → Propionicicella superfundia	529	Open in IMG/M
3300005338\|Ga0068868_100498985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1066	Open in IMG/M
3300005347\|Ga0070668_100067601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	2776	Open in IMG/M
3300005459\|Ga0068867_100618222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	947	Open in IMG/M
3300005616\|Ga0068852_100013546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	6243	Open in IMG/M
3300009093\|Ga0105240_10720526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1087	Open in IMG/M
3300009098\|Ga0105245_10393691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1383	Open in IMG/M
3300009148\|Ga0105243_10037887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	3751	Open in IMG/M
3300009148\|Ga0105243_11175763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	779	Open in IMG/M
3300009176\|Ga0105242_10010846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	6999	Open in IMG/M
3300009545\|Ga0105237_10808733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	944	Open in IMG/M
3300009553\|Ga0105249_10007713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	9379	Open in IMG/M
3300009553\|Ga0105249_10565356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1189	Open in IMG/M
3300010373\|Ga0134128_12283826	Not Available	596	Open in IMG/M
3300010999\|Ga0138505_100004161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1436	Open in IMG/M
3300011000\|Ga0138513_100000242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	3369	Open in IMG/M
3300012212\|Ga0150985_101456238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	593	Open in IMG/M
3300012469\|Ga0150984_117658752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	764	Open in IMG/M
3300012469\|Ga0150984_120716438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	695	Open in IMG/M
3300012478\|Ga0157328_1008875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	666	Open in IMG/M
3300012482\|Ga0157318_1034798	Not Available	514	Open in IMG/M
3300012491\|Ga0157329_1001337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1233	Open in IMG/M
3300012494\|Ga0157341_1004704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	997	Open in IMG/M
3300012495\|Ga0157323_1007337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	793	Open in IMG/M
3300012897\|Ga0157285_10080145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	861	Open in IMG/M
3300012905\|Ga0157296_10107774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	772	Open in IMG/M
3300012937\|Ga0162653_100025539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	823	Open in IMG/M
3300012941\|Ga0162652_100072393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	589	Open in IMG/M
3300012951\|Ga0164300_10026230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	2085	Open in IMG/M
3300012951\|Ga0164300_11021573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	534	Open in IMG/M
3300012958\|Ga0164299_10004292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	4672	Open in IMG/M
3300012961\|Ga0164302_11695206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	529	Open in IMG/M
3300012984\|Ga0164309_10140180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1592	Open in IMG/M
3300012987\|Ga0164307_10444525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	966	Open in IMG/M
3300012989\|Ga0164305_10067738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	2169	Open in IMG/M
3300013102\|Ga0157371_10364146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1054	Open in IMG/M
3300013307\|Ga0157372_10229370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2153	Open in IMG/M
3300013308\|Ga0157375_12576870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	607	Open in IMG/M
3300014745\|Ga0157377_11282317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	572	Open in IMG/M
3300015201\|Ga0173478_10306838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	721	Open in IMG/M
3300015371\|Ga0132258_10029201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	12270	Open in IMG/M
3300015371\|Ga0132258_10124658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	6129	Open in IMG/M
3300015371\|Ga0132258_10471545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	3133	Open in IMG/M
3300015372\|Ga0132256_100205669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2017	Open in IMG/M
3300015372\|Ga0132256_101016843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	944	Open in IMG/M
3300015373\|Ga0132257_103000040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	615	Open in IMG/M
3300015374\|Ga0132255_101079312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1206	Open in IMG/M
3300018028\|Ga0184608_10016648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	2606	Open in IMG/M
3300018031\|Ga0184634_10080300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1400	Open in IMG/M
3300018051\|Ga0184620_10000216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	10638	Open in IMG/M
3300018061\|Ga0184619_10072885	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300018066\|Ga0184617_1000160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	6318	Open in IMG/M
3300018067\|Ga0184611_1227706	Not Available	663	Open in IMG/M
3300018071\|Ga0184618_10172432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	894	Open in IMG/M
3300018074\|Ga0184640_10133074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	1100	Open in IMG/M
3300018076\|Ga0184609_10161601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1034	Open in IMG/M
3300018081\|Ga0184625_10570084	Not Available	560	Open in IMG/M
3300018082\|Ga0184639_10074016	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300019269\|Ga0184644_1200570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1471	Open in IMG/M
3300019279\|Ga0184642_1037421	Not Available	627	Open in IMG/M
3300019356\|Ga0173481_10844076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	511	Open in IMG/M
3300019767\|Ga0190267_10516199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	712	Open in IMG/M
3300020005\|Ga0193697_1001231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	7764	Open in IMG/M
3300021951\|Ga0222624_1468570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	930	Open in IMG/M
3300023071\|Ga0247752_1082430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	538	Open in IMG/M
3300025899\|Ga0207642_10069823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	1667	Open in IMG/M
3300025924\|Ga0207694_11367373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	599	Open in IMG/M
3300025927\|Ga0207687_10214871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1511	Open in IMG/M
3300025935\|Ga0207709_10067022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2264	Open in IMG/M
3300026023\|Ga0207677_10669277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	918	Open in IMG/M
3300026089\|Ga0207648_10753026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	905	Open in IMG/M
3300028704\|Ga0307321_1077989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	654	Open in IMG/M
3300028705\|Ga0307276_10027854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1153	Open in IMG/M
3300028709\|Ga0307279_10026758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	832	Open in IMG/M
3300028716\|Ga0307311_10014934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1887	Open in IMG/M
3300028717\|Ga0307298_10036916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1314	Open in IMG/M
3300028718\|Ga0307307_10222986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	599	Open in IMG/M
3300028721\|Ga0307315_10017493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1830	Open in IMG/M
3300028744\|Ga0307318_10018830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	2222	Open in IMG/M
3300028754\|Ga0307297_10002134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	4733	Open in IMG/M
3300028771\|Ga0307320_10477702	Not Available	503	Open in IMG/M
3300028799\|Ga0307284_10156563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	881	Open in IMG/M
3300028819\|Ga0307296_10030125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	2862	Open in IMG/M
3300030829\|Ga0308203_1057224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	603	Open in IMG/M
3300030904\|Ga0308198_1051385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	640	Open in IMG/M
3300030905\|Ga0308200_1004878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1728	Open in IMG/M
3300030905\|Ga0308200_1183392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	502	Open in IMG/M
3300030989\|Ga0308196_1011886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	917	Open in IMG/M
3300030993\|Ga0308190_1181683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	520	Open in IMG/M
3300031091\|Ga0308201_10210127	Not Available	648	Open in IMG/M
3300031093\|Ga0308197_10253072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	627	Open in IMG/M
3300031096\|Ga0308193_1054624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	607	Open in IMG/M
3300031114\|Ga0308187_10123994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	832	Open in IMG/M
3300031422\|Ga0308186_1035985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	528	Open in IMG/M
3300031740\|Ga0307468_100975085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	743	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.82%
Host-Associated	Host-Associated	41.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	45.10%
Plants	Host-Associated → Plants	40.20%
Aquatic	Environmental → Aquatic	13.73%
Human	Host-Associated → Human	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.63%
Sediment	Environmental → Aquatic → Sediment	10.78%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	3.92%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Digestive System	Host-Associated → Human → Digestive System	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	3.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	35.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	3.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012478	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610	Host-Associated	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_125611521	3300000789	Soil	MLVPLETLSGWPRVENPPALYSLLLFXGXPILVFLIVIAINKIVQGMHLSRGEDPRTRDPLYVVDAQTGEAKLVEADRGTDLGQEALVGTGEIEGD
JGI10216J12902_1092175813	3300000956	Soil	LYSLLLFFGFPILVFLIVIAINKIVQGMHRSRGEDPRTRDPLYVVDARTGEAKLVEADRGTDLGQEALVGTGEVEGDDTGEHVGGAGARW*
Ga0063356_1019592473	3300004463	Arabidopsis Thaliana Rhizosphere	RAVNELLSMLVPLETLSGWPRVENPPALYSLLLFFGFPILVFLVVIAINKIVQGMHRSRGEDPRTRDPLYVVDAQTGEAKLVEADRGTDLGQEALVGTGEIEGDDTGEHVGGAGARW*
Ga0058862_124137022	3300004803	Host-Associated	VNELLSMLVPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0062594_1031946361	3300005093	Soil	LSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0070676_114424791	3300005328	Miscanthus Rhizosphere	MLVPLETLSGWPQVEDPPPLDSLLLFVGFPILVFLIVIAINKIVQSIHTTRGDDPRTRDPLYVVDARTGEAKLVDANPGTDAGQQALVGSREVEGDDTG
Ga0068868_1004989851	3300005338	Miscanthus Rhizosphere	VPLETLSGWPPAENPTVLQTLVLLVGVPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGAR
Ga0070668_1000676014	3300005347	Switchgrass Rhizosphere	VPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0068867_1006182223	3300005459	Miscanthus Rhizosphere	RAVNELLSMLVPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0068852_1000135464	3300005616	Corn Rhizosphere	VPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVSSSDLEGDDTGEHVGGAGARW*
Ga0068865_1002459402	3300006881	Miscanthus Rhizosphere	MLFVGVPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0105240_107205261	3300009093	Corn Rhizosphere	LLLFVGIPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0105245_103936914	3300009098	Miscanthus Rhizosphere	SGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0105243_100378876	3300009148	Miscanthus Rhizosphere	MLVPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEGSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0105243_111757632	3300009148	Miscanthus Rhizosphere	MLVPLETLSGWPPAENPTVLQTLVLFVGFPILVFLIVIAINKIVQSIHTTRGDDPRTRDPLYVVDARTGEAKLVDANPGTDAGQQALVGSREVEGDDTGEHVGGAGARW*
Ga0105242_100108464	3300009176	Miscanthus Rhizosphere	MLVPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGALEPVAGARW*
Ga0105237_108087332	3300009545	Corn Rhizosphere	LLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0105249_1000771310	3300009553	Switchgrass Rhizosphere	MLVPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0105249_105653562	3300009553	Switchgrass Rhizosphere	MLVPLETLSGWPPAENPTVLQTLVLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDTGQQVLVGSGEVEGDDTGEPVGGAGARW*
Ga0134128_122838261	3300010373	Terrestrial Soil	SLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDRGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0138505_1000041612	3300010999	Soil	MLVPLETLSGWPPAENPTALQTLVLLVGFPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYMVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW*
Ga0138513_1000002424	3300011000	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW*
Ga0150985_1014562382	3300012212	Avena Fatua Rhizosphere	MLVPLETLSGWPAAENPTALQSLLVFVGIPILVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTAEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW*
Ga0150984_1176587522	3300012469	Avena Fatua Rhizosphere	LLSMLVPLETLSGWPRVENPPALYSLLLFFGFPILVFLIVIAINKIVQGMHRSRGEDPRTRDPLYVVDAQTGEAKLVDADRGTDLGQEALVGTGDVERDDTGEHVGGAGARW*
Ga0150984_1207164381	3300012469	Avena Fatua Rhizosphere	LLSMLVPLETLSGWPAAENPTALQSLLVFVGIPILVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDAGEHVGGAGARW*
Ga0157328_10088752	3300012478	Arabidopsis Rhizosphere	MLVPLETLSGWPAVENPTALQSLLLFVGFPILVFLIVIAINKIVQTIHTTRGDDPRTRDPLYLVDARTGEAKLVEANPGTDLGQQALVGS
Ga0157318_10347981	3300012482	Arabidopsis Rhizosphere	SLALFVGVPLLVFLIVIAINKIVQTIHATRGDDPRTRDPLYVVDARTGEAKLVEANPGTDLGQQALVGSGEVEGDDTGEHVGGAGARW*
Ga0157329_10013373	3300012491	Arabidopsis Rhizosphere	MLVPLETLSGWPAVENPTALQSLLLFVGFPILVFLIVIAINKIVQTIHTTRGDDPRTRDPLYLVDARTGEAKLVEASPGTDLGQQALVGSGEVEGDDTGEHVGGAGARW*
Ga0157341_10047042	3300012494	Arabidopsis Rhizosphere	MLVPLETLSGWPQVENPTALQSLVLFVGVPLLVFLIVIAINKIVQTIHTTRGDDPRTRDPLYLVDARTGEAKLVEANPGTDLGQQALVGSGEVEGDETGEHVGGAGARW*
Ga0157323_10073372	3300012495	Arabidopsis Rhizosphere	MLVPLETLSGWPAVENPTALQSLLLFVGFPILVFLIVIAINKIVQTIHTTRGDDPRTRDPLYLVDARTGEAKLVEANPGTDLGQQALVGSGEVEGDDTGEHVGGAGARW*
Ga0157285_100801451	3300012897	Soil	VENPPALYSLLLFFGFPILVFLVVIAINKIVQGMHRSRGEDPRTRDPLYVVDAQTGEAKLVEADRGTDLGQEALVGTGEIEGDDTGEHVGGAGARW*
Ga0157296_101077742	3300012905	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGFPILVFLIVIAINKIVQTIHATRGDDPRTRDPLYVVDARTGEAKLVDANPGTDAGQQALVGSREVEGDDTGEHVGGAGARW*
Ga0162653_1000255392	3300012937	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDT
Ga0162652_1000723931	3300012941	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDTGQQVLVGSGEVEGDDTGE
Ga0164300_100262304	3300012951	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGFPILVFLIVIAINKIVQTMHATRGDDPRTRDPLYVVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW*
Ga0164300_110215732	3300012951	Soil	LSMLVPLETLSGWPPAENPTVLQTLVLLVGFPILVFLIVIAINRIVQNIHATRGDDPRTSDPLYLVDARTGEAKLMDANPGTVAEQQALVGSGEVEGGDTGEHVGGAGARW*
Ga0164299_100042925	3300012958	Soil	MLVPLETLSGWQPAEKQTVLQTLVLLVGFPILVFLIVIAINKIVQTMHATRGDDPRTRDPLYVVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW*
Ga0164302_116952062	3300012961	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGFPILVFLIVIAINKIVQTMHATRGDDPRTRDPLYVVDARTGEAKLMDANPGTVAEQQALVGSGEVEGGDNGEHVGGAGARW*
Ga0164309_101401803	3300012984	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGFPILVFLIVIAINKIVQTMHATRGDDPRTRDPLYVVDARTGEAKLVDANPGTDAGQQALVGSGEVEG
Ga0164307_104445252	3300012987	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLMDANPGTVAEQQALVGSGEVEGGDTGEHVGGAGARW*
Ga0164305_100677382	3300012989	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGFPILVFLIVIAINKIVQTIHATRGDDPRTRDPLYVVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW*
Ga0157371_103641461	3300013102	Corn Rhizosphere	LSMLVPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0157372_102293701	3300013307	Corn Rhizosphere	MLVPLETLSGWPQVENPPPLDSLMLFVGVPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0157375_125768702	3300013308	Miscanthus Rhizosphere	MLVPLETLSGWPPAENPTVLQTLVLLVGVPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0157377_112823171	3300014745	Miscanthus Rhizosphere	MLVPLETLSGWPPAENPTVLQTLVLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW*
Ga0173478_103068382	3300015201	Soil	VENPPALYSLLLFFGFPILVFLVVIAINKIVQGMHRSRGEDPRTRDPLYVVDAQTGEAKLVEADRGTDLGQEALVGTGDVEGHDTGEHVGGAGARW*
Ga0132258_100292018	3300015371	Arabidopsis Rhizosphere	VENPPVLYSLLLFFGFPILVFLIVIAINKIVQGMHRTRGEDPRTRDPLYVVDARTGEAKLVEADRGTDLGQEALVGTGEVEGDDTGEHVGGAGARW*
Ga0132258_101246581	3300015371	Arabidopsis Rhizosphere	MLVPLETLSGWPQVENPTALQSLVLFVGVPLLVFLIVIAINKIVQTIHATRGDDPRTRDPLYVVDARTGEARLVDANSGTEAGQQALVGSGEVEGDETGEHVGGAGARW*
Ga0132258_104715454	3300015371	Arabidopsis Rhizosphere	MLVPLETLSGWPQVENPPPLDSLLLFFGFPILVFLIVVAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEANPGTDLGQQALVGSSEIEGDDTGEHVGGAGARW*
Ga0132256_1002056693	3300015372	Arabidopsis Rhizosphere	MLVPLETLSGWPAVENPTALQSLLLFVGFPILVFLIVIAINKIVQTIHTTRGDDPRTRDPLYLVDARTGEAKLVDANPGTDVEQQALVGTGEVEGDDTGEHVGGAGARW*
Ga0132256_1010168433	3300015372	Arabidopsis Rhizosphere	RAVNELLSMLVPLETLSGWPRVENPPVLYSLLLFFGFPILVFLIVIAINKIVQGMHRTRGEDPRTRDPLYVVDARTGEAKLVEADRGTDLGQEALVGTGEVEGDDTGEHVGGAGARW*
Ga0132257_1030000401	3300015373	Arabidopsis Rhizosphere	MLVPLETLSGWPQVENPTALQSLVLFVGVPLLVFLIVIAINKIVQTIHATRGDDPRTRDPLYVVDARTGEARLVDANSGTEAGQQALV
Ga0132255_1010793122	3300015374	Arabidopsis Rhizosphere	VENPPVLYSLLLFFGFPILVFLIVIAINKIVQGMHRSRGEDPRTRDPLYVVDARTGEAKLVEADRGTDLGQEALVGTGEVEGDDTGEHVGGAGARW*
Ga0184608_100166482	3300018028	Groundwater Sediment	VPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYVVDARTGEAPLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0184634_100803003	3300018031	Groundwater Sediment	VPLETLSGWPPAENPTVLQTLVLLVGFPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYIVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0184620_100002169	3300018051	Groundwater Sediment	MLVPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0184619_100728853	3300018061	Groundwater Sediment	VPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEPVGGAGARW
Ga0184617_10001602	3300018066	Groundwater Sediment	MLVPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYVVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0184611_12277062	3300018067	Groundwater Sediment	VPLETLSVWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYVVDALTGEAKLVDANPGTDAGQQVLAGSGEVEGDDTGEHVGGAGARW
Ga0184618_101724322	3300018071	Groundwater Sediment	MLVPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLWVGAQESAEVEPIPDSKPSEQTAATPTGDSNVEGDDTGEHVGGAGARW
Ga0184640_101330743	3300018074	Groundwater Sediment	VPLETLSGWPQAENPTALQSLLVLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDAGQQVLAGSGEVEGDDTGEHVGGAGARW
Ga0184609_101616013	3300018076	Groundwater Sediment	VNELLSMLVPLETLSGWPRAENPTALQSLLLLFGAPILVFLIVIAINKIVQTFHATRGDDPRTSDPLYVVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0184625_105700841	3300018081	Groundwater Sediment	TALQSLLVFVGIPILVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0184639_100740162	3300018082	Groundwater Sediment	VPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYVVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0184644_12005703	3300019269	Groundwater Sediment	VPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0184642_10374212	3300019279	Groundwater Sediment	ALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTGEARLVDANSGTEAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0173481_108440762	3300019356	Soil	VPLETLSGWPQGENPPPLDSLLLFFGFPILVFRIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEAKLVEENPGTDLGQQALVGSSEIEGDDTGEHVGGAGARW
Ga0190267_105161991	3300019767	Soil	VPLETLSGWPPAENPTVLQTLVLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDTGQQVLVGSGEVEGDDTGEPVGGAGARW
Ga0193697_10012319	3300020005	Soil	MLVPLETLSGWPPAENPTVLQTLVLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDTGQQVLVGSGEVEGDDTGEHVGGAGARW
Ga0222624_14685703	3300021951	Groundwater Sediment	LLSMLVPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0247752_10824301	3300023071	Soil	VENPPALYSLLLFFGFPILVFLVVIAINKIVQGMHRSRGEDPRTRDPLYVVDAQTGEAKLVEADRGTDLGQEALVGTGEIEGDDTG
Ga0207642_100698232	3300025899	Miscanthus Rhizosphere	VPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW
Ga0207694_113673731	3300025924	Corn Rhizosphere	VPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEGSRGTDLGQEALVGSSDLEGDDTGEH
Ga0207687_102148711	3300025927	Miscanthus Rhizosphere	SGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW
Ga0207686_103646993	3300025934	Miscanthus Rhizosphere	MLFVGVPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGALEPVAGARW
Ga0207709_100670224	3300025935	Miscanthus Rhizosphere	VPLETLSGWPPAENPTVLQTLVLFVGFPILVFLIVIAINKIVQSIHTTRGDDPRTRDPLYVVDARTGEAKLVDANPGTDAGQQALVGSREVEGDDTGEHVGGAGARW
Ga0207677_106692773	3300026023	Miscanthus Rhizosphere	LLSMLVPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVDANPGTDAGQQALVGSREVEGDDTGEHVGGAGARW
Ga0207648_107530262	3300026089	Miscanthus Rhizosphere	MLVPLETLSGWPQVENPPPLDSLLLFVGFPILVFLIVIAINKIVQGIHRSRGDDPRTRDPLYAVDARTGEAKLVEVSRGTDLGQEALVGSSDLEGDDTGEHVGGAGARW
Ga0307321_10779891	3300028704	Soil	VPLETLSGWPRAENPTALQSLLLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYMVDARTGEARLVDANSGTEPGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0307276_100278543	3300028705	Soil	ELLSMLVPLETLSGWPRVENPPALYSLLLFFGFPILVFLVVIAINKIVQGMHRSRGEDPRTRDPLYVVDAQTGEAKLVEADRGTDLGQEALVGSGEVEGDDTGEHVGGAGARW
Ga0307279_100267581	3300028709	Soil	AENPTALQSLLLLFGAPIVVFLIVIAINKIVQTIHATRGDDPRTSDPLYIVDARTGEARLVDANSGTEPGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0307311_100149341	3300028716	Soil	VPLETLSGWPQAENPTALESLLVFVGIPLLVFLIVIAINKIVQTIHATRGDDPRTSDPLYMVDARTGEARLVDANSGTEPGQQALVGSGE
Ga0307298_100369163	3300028717	Soil	VPLETLSGWPRAENPTALQSLLLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYMVDARTGEARLVDANSGTEAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0307307_102229862	3300028718	Soil	VPLETLSGWPRAENPTALQSLLLLFGAPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYIVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0307315_100174934	3300028721	Soil	VPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYVVDARTGEAQLVDANQGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0307318_100188303	3300028744	Soil	VPLETLSGWPRVENPPALYSLLLFFGFPILVFLVVIAINKIVQGMHRSRGEDPRTRDPLYVVDAQTGEAKLVEADRGTDLGQEALVGSGEVEGDDTGEHVGGAGARW
Ga0307297_100021344	3300028754	Soil	VPLETLSGWPRAENPTALQSLLLLFGAPILVFLIVIAINKIVQTFHATRGDDPRTSDPLYVVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0307320_104777021	3300028771	Soil	WPRVENPPALYSLLLFFGFPILVFLVVIAINKIVQGMHRSRGEDPRTRDPLYVVDAQTGEAKLVEADRGTDLGQEALVGSGEVEGDDTGEHVGGAGARW
Ga0307284_101565633	3300028799	Soil	VPLETLSGWPRAENPTALQSLLLFFGAPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYIVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0307296_100301253	3300028819	Soil	VPLETLSGWPRAENPTALQSLLLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYIVDARTGEARLVDANSGTEAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0308203_10572242	3300030829	Soil	PLETLSGWPQAENPTALQSLLVLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0308198_10513852	3300030904	Soil	VPLETLSGWPRAENPTALQSLLLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYMVDARTGEAKLVDANSGTEPGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0308200_10048784	3300030905	Soil	LSMLVPLETLSGWPRAENPTALQSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0308200_11833922	3300030905	Soil	LETLSGWPRAENPTALQSLLLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYMVDARTGEARLVDANSGTEPGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0308196_10118863	3300030989	Soil	NELLSMLVPLETLSGWPRAENPTALQSLLLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYMVDARTGEARLVDANSGTEPGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0308190_11816832	3300030993	Soil	LLSMLVPLETLSGWPRAENPTALQSLLLLFGAPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYIVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0308201_102101272	3300031091	Soil	QSLLLLFGAPIVVFLIVIAINKIVQTFHATRGDDPRTSDPLYMVDARTGEAQLVDANPGTDLGQQALVGGGEVEGDDTGEHVGGAGARW
Ga0308197_102530722	3300031093	Soil	MLVPLETLSGWPQAENPTALQSLLVLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDAGQQVLAGSGE
Ga0308193_10546242	3300031096	Soil	VNELLSMLVPLETLSGWPRAENPTALQSLLLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYMVDARTGEARLVDANSGTEAGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0308187_101239942	3300031114	Soil	MLVPLETLSGWPQAENPTALQSLLVLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYLVDARTGEAKLVDANPGTDAGQQVLAGSGEVQGDDTGEHVGGA
Ga0308186_10359851	3300031422	Soil	LLSMLVPLETLSGWPPAENPTVLQTLVLLVGVPILVFLIVIAINKIVQTIHATRGDDPRTSDPLYMVDARTGEARLVDANSGTEPGQQALVGSGEVEGDDTGEHVGGAGARW
Ga0307468_1009750851	3300031740	Hardwood Forest Soil	LETLSGWPPAENPTALQSLMLFVGIPILVFLIVIAINKIVQTIHATRGDDPRTDDPLYMVDARTGEAKLVDANPGTDAGQQALVGSGEVEGDDTGEHVGGAGARW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100529

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences