NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F100575

Metagenome / Metatranscriptome Family F100575

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F100575
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 85 residues
Representative Sequence LTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAVAALVLAARIQRDWRNKFVAYGYIAAAAASLYL
Number of Associated Samples 89
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 42.42 %
% of genes near scaffold ends (potentially truncated) 96.08 %
% of genes from short scaffolds (< 2000 bps) 91.18 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.196 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(14.706 % of family members)
Environment Ontology (ENVO) Unclassified
(34.314 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.686 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 71.93%    β-sheet: 0.00%    Coil/Unstructured: 28.07%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.70
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF09180ProRS-C_1 73.53
PF01642MM_CoA_mutase 1.96
PF13857Ank_5 0.98
PF13360PQQ_2 0.98
PF01523PmbA_TldD 0.98
PF01545Cation_efflux 0.98
PF00872Transposase_mut 0.98
PF01641SelR 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0442Prolyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 73.53
COG1884Methylmalonyl-CoA mutase, N-terminal domain/subunitLipid transport and metabolism [I] 1.96
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 0.98
COG0229Peptide methionine sulfoxide reductase MsrBPosttranslational modification, protein turnover, chaperones [O] 0.98
COG0312Zn-dependent protease PmbA/TldA or its inactivated homologGeneral function prediction only [R] 0.98
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 0.98
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.98
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 0.98

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.20 %
UnclassifiedrootN/A9.80 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_101253168All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300002908|JGI25382J43887_10064894All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1975Open in IMG/M
3300005167|Ga0066672_10994092All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300005172|Ga0066683_10822066All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005181|Ga0066678_11140826All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005331|Ga0070670_100512741All Organisms → cellular organisms → Bacteria1067Open in IMG/M
3300005332|Ga0066388_100122088All Organisms → cellular organisms → Bacteria3130Open in IMG/M
3300005332|Ga0066388_107141628All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300005332|Ga0066388_107818184All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005445|Ga0070708_100796014All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300005446|Ga0066686_10366517All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300005446|Ga0066686_10982153All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300005450|Ga0066682_10331413All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300005458|Ga0070681_11025692All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300005529|Ga0070741_11016306All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005529|Ga0070741_11583066All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300005536|Ga0070697_100965412All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300005557|Ga0066704_10203257All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300005598|Ga0066706_11062553All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005937|Ga0081455_10754207All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300006852|Ga0075433_10907055All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300006852|Ga0075433_11786529All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300006871|Ga0075434_101241381All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300006904|Ga0075424_100421062All Organisms → cellular organisms → Bacteria1425Open in IMG/M
3300007076|Ga0075435_101806814All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300009012|Ga0066710_104804032All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300009100|Ga0075418_12102395All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300009137|Ga0066709_102900796All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium633Open in IMG/M
3300009147|Ga0114129_10328791All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2030Open in IMG/M
3300009162|Ga0075423_11472007All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300009609|Ga0105347_1145916All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium922Open in IMG/M
3300010043|Ga0126380_11427969All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300010047|Ga0126382_12516186All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300010303|Ga0134082_10295602All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300010320|Ga0134109_10129327All Organisms → cellular organisms → Bacteria → Acidobacteria897Open in IMG/M
3300010358|Ga0126370_11354299All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium670Open in IMG/M
3300010359|Ga0126376_12131113All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300010359|Ga0126376_12793325All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300010360|Ga0126372_10758869All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium955Open in IMG/M
3300010360|Ga0126372_11401808All Organisms → cellular organisms → Bacteria → Acidobacteria731Open in IMG/M
3300010361|Ga0126378_10742693All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1092Open in IMG/M
3300010362|Ga0126377_13328016All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300010391|Ga0136847_13493828All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300010397|Ga0134124_11996615All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes617Open in IMG/M
3300010398|Ga0126383_11511259All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium761Open in IMG/M
3300010398|Ga0126383_11634537All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300010403|Ga0134123_12732115All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300011120|Ga0150983_11301571All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium566Open in IMG/M
3300012173|Ga0137327_1090650All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium682Open in IMG/M
3300012206|Ga0137380_10293971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1456Open in IMG/M
3300012207|Ga0137381_11048454All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300012211|Ga0137377_10258850All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1671Open in IMG/M
3300012357|Ga0137384_11427437All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300012359|Ga0137385_10419993All Organisms → cellular organisms → Bacteria → Acidobacteria1139Open in IMG/M
3300012373|Ga0134042_1112385Not Available680Open in IMG/M
3300012399|Ga0134061_1077304All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300012407|Ga0134050_1096513All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300012948|Ga0126375_11474525All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300012976|Ga0134076_10413583All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300013297|Ga0157378_10908069All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium912Open in IMG/M
3300014150|Ga0134081_10099687All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium914Open in IMG/M
3300014154|Ga0134075_10030134All Organisms → cellular organisms → Bacteria2201Open in IMG/M
3300014154|Ga0134075_10058579All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1598Open in IMG/M
3300015357|Ga0134072_10463261All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300015359|Ga0134085_10035032All Organisms → cellular organisms → Bacteria1968Open in IMG/M
3300015359|Ga0134085_10270997All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300015359|Ga0134085_10366564All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium642Open in IMG/M
3300015372|Ga0132256_103518375All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300016270|Ga0182036_10639242Not Available856Open in IMG/M
3300016294|Ga0182041_11903133All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300016319|Ga0182033_11028804All Organisms → cellular organisms → Bacteria → Acidobacteria733Open in IMG/M
3300016371|Ga0182034_10959437All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300016445|Ga0182038_10095835Not Available2141Open in IMG/M
3300016445|Ga0182038_11891942All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300017657|Ga0134074_1070312Not Available1190Open in IMG/M
3300017659|Ga0134083_10540563All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300018433|Ga0066667_10480992All Organisms → cellular organisms → Bacteria → Acidobacteria1019Open in IMG/M
3300018482|Ga0066669_10955518All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300021478|Ga0210402_10977034All Organisms → cellular organisms → Bacteria → Acidobacteria774Open in IMG/M
3300025928|Ga0207700_11821351All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300026116|Ga0207674_11289961All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium700Open in IMG/M
3300026307|Ga0209469_1077307Not Available1000Open in IMG/M
3300026313|Ga0209761_1008598All Organisms → cellular organisms → Bacteria6660Open in IMG/M
3300026326|Ga0209801_1273306All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300026343|Ga0209159_1186954All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300026524|Ga0209690_1197474All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300026524|Ga0209690_1255531All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300026547|Ga0209156_10389784All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300027815|Ga0209726_10411378All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300027903|Ga0209488_11018954All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300027909|Ga0209382_12116135All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300027965|Ga0209062_1099581Not Available1223Open in IMG/M
3300031720|Ga0307469_10566938All Organisms → cellular organisms → Bacteria → Acidobacteria1009Open in IMG/M
3300031890|Ga0306925_11813607All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300031942|Ga0310916_10648550Not Available895Open in IMG/M
3300031954|Ga0306926_10213654All Organisms → cellular organisms → Bacteria2394Open in IMG/M
3300032035|Ga0310911_10489136All Organisms → cellular organisms → Bacteria → Acidobacteria713Open in IMG/M
3300032261|Ga0306920_103508837All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300032421|Ga0310812_10328707All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium682Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil14.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil14.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.76%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.82%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.82%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.88%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.94%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.96%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.98%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.98%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.98%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.98%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.98%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012173Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012399Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027965Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10125316823300000955SoilMVTERDTWIRHFFYLALFAAAFHTLQFLASLLLWTTTRSAALMSYGLDAAVSAIAALILAARIRGEW
JGI25382J43887_1006489413300002908Grasslands SoilMTEDREIWIRHSFYLALFAASLHSLQFLASFSLWISTNSAALMSYGLDALVSAVAALXLAHXIQGEWRXKFVAYGYTVASAGALYLGGSMLWAKR
Ga0066672_1099409213300005167SoilMPTGMIEERAIWIRHFCCLAIFAGTFHSLQFLASVLLWAGTNSAALMAYGLDAIVSAAAALVLATRIPRDWRNRFVAYGYMTAAASSLYLGASTLWLGRWPRTSMLGIVVAAISMLVIPIAGSYMKTLA
Ga0066683_1082206613300005172SoilLTEDREIWIRHCFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAAAALVLATRIQRDWRNKFVAYGYIA
Ga0066678_1114082623300005181SoilMPTGMIEERAIWIRHFCCLAIFAGTFHSLQFLASVLLWAGTNSAALMAYGLDAIVSAAAALVLATRIPRDWRNRFV
Ga0070670_10051274113300005331Switchgrass RhizosphereMATTEERETWIRHFLYLALFAAAFHTLQFLAALTLWIRTQSAALMSYGLDAAVSAVSALVLSGRIQREWRNKFVAYGYMLASAGAFYLGASMLWRRQLPQASV
Ga0066388_10012208833300005332Tropical Forest SoilMTDEREIWIRHFFYLALFAAGFHALQFIASLLLWMSTRSAALMSFGLDAVVSAVAALVLAARI
Ga0066388_10714162813300005332Tropical Forest SoilMADERETWLRHFFYLTLFAATFHGLQFTASLLLWINTKSAALMAYGLDAIVSAVAALVLAARLRRDWRNKFVAYGYILAAALSFYLGASMLWKGERPQTTVLGIAL
Ga0066388_10781818413300005332Tropical Forest SoilMPEDRETWIRHFLYLALFAAAFHSLQFLSSLALWRASGSAALMSYGLDAVVSAIAALVLAGRLRREWRNKFVAYGYMLAAAGSG
Ga0070708_10079601433300005445Corn, Switchgrass And Miscanthus RhizosphereMTDEREIWIRHFFYLALFAAGFHSLQFLTSLLLWMRTESPVLMAFGLDAAVSAVAALVLAARIQREWRNKFVAYGYM
Ga0066686_1036651713300005446SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTSSAALLSYGLDAVVSAAAALVLATRIQRDWRNKFVAYGYIAAAAASLYLGASILWLRRWPKTSALGIGVAAISMLV
Ga0066686_1098215323300005446SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSVALLSYGLDAVVSAAAALVLAARIRRDWRNKFVAYGYIAAAAASLYLGASILWLRRWPKTSALGIGVAAISMLV
Ga0066682_1033141323300005450SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTSSAALLSYGLDAVVSAAAALVLATRIQRDWRNKFVAYGYIAAAAASLYLGASILWLRRWPKTSALGIGVAAISML
Ga0070681_1102569223300005458Corn RhizosphereMTDTRETWIRHFFYLALFAAIFHGLQFLSSLLLWINTNSAALMAYGLDAIVSAVAALVLAARLRRDWRNKVVAYCYLLAAALSFYL
Ga0070741_1101630623300005529Surface SoilMPDDREVWIRHFFYLALFAALFHALQFAASVLLWRSTSSAALLAYGLDAIVSAIAAVVLAGRLERDWRNKFVAYGYLLAAALSF
Ga0070741_1158306623300005529Surface SoilMSSERELWLRHFFYLALFASFFHTLQFTASLVLWITTRSAALMAYGLDAVVSAVAAIVLAARLQREWRNKFVAYGY
Ga0070697_10096541223300005536Corn, Switchgrass And Miscanthus RhizosphereLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAAAALVLATRIQRDWRNKFVAYGYIAAASVSLYLGASILWLRRW
Ga0066704_1020325723300005557SoilMIEERAIWIRHFCCLAIFAGTFHSLQFLASVLLWAGTNSAALMAYGLDAIVSAAAALVLATRIPRDWRNRFVAYGYMTAAAGSLYLGALTLWLGRWPRTSMLGIVVAAISML
Ga0066706_1106255313300005598SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTSSAALLSYGLDAVVSAAAALVLATRIQRDWRNKFVAYGYIAAAAASLYLGASILWLR
Ga0081455_1075420723300005937Tabebuia Heterophylla RhizosphereMTDEREIWIRHFLYLALFAAAFHSLQFLAALFLWMSTRSAALMAFGLDAVVSAVAALVLA
Ga0075433_1090705513300006852Populus RhizosphereMTDERETWIRHFFYLALFAAAFHTLQFLAALFLWMSSGSAALMAFGLDAVVSAVAALVLAARIRKEWRHRSVAYGYMVAAAGAFYLGASMLWTGARPQPS
Ga0075433_1178652913300006852Populus RhizosphereMTDEREIWIRQFFYLALFAAAFHSLQFLASLVLWMSTRSAVLMAFGLDAVVSAVAALVLA
Ga0075434_10124138113300006871Populus RhizosphereMTDERETWIRHFFYLALFAAAFHTLQFLAALFLRMSSGSAALMAFGLDAVVSAVAALVLAARIRKEWRHR
Ga0075424_10042106213300006904Populus RhizosphereMTDERETWIRHFFYLALFAAAFHTLQFLAALFLWMSSGSAALMAFGLDAVVSAVAALVLAARIRKEWRHRSVAYGYMVAAAGAFYLGASMLWTGARPQPSVLGI
Ga0075435_10180681423300007076Populus RhizosphereMTDERETWIRHFFYLALFAAAFHTLQFLAALFIWMSTRSAALMAFGLDAVVSAVAALVLAARIRKEWRHRSVAYA
Ga0066710_10480403213300009012Grasslands SoilMTPEREIWIRHFFYFALFAAVFHALQFLASLTLWMTTRSPALLSFGFDAAVSAIAALFLAARIQREWRNQYVAYGYTLASAAAFYLGASTLWRAELPQTTALGIVLAAVSMLVIPIM
Ga0075418_1210239513300009100Populus RhizosphereMTSDRETWIRHFFYLALFAAAFHGLQFLASFLLWLTTRSAALMSYGLDAIVSAFAALVLSRRLRREWRNKFVAYGYMAAAAGSLYLGASMLWRGARPVASVLGIVVA
Ga0066709_10290079613300009137Grasslands SoilMTDERDIWIRHFFYLALFAAAFHSLQFVASLLLWIQMNSAALMAYGLDAAVSAVAALVLAARVEREWRNKFVAYGYMAASAGAFYLGASMLWKGQRPK
Ga0114129_1032879133300009147Populus RhizosphereMTSDRETWIRHFFYLALFAAAFHGLQFLASFLLWLTTRSAALMSYGLDAIVSAFAALVLSRRLRREWRNKFVAYGYMAAAAGSLYLGASMLW
Ga0075423_1147200723300009162Populus RhizosphereLTNDREVWIRHFFYLALFAAAFHTLQFLASFLLWKTTASPVLMSFGLDAAVSAIAALVLAARIQREWRNKFVAYGYMAAGAIALYLGGSALWTGRQPKST
Ga0105347_114591613300009609SoilMTSERETWIRHFLYLALFAAAFHSLQFLASLALWMSSRSPALMSYGLDAAVSAIAALVLA
Ga0126380_1142796913300010043Tropical Forest SoilMTDEREIWIRHFFYLALFAAGFHALQFIASLLLWMSTRSAAMMSFGLDAVVSAVAALVLAARIPKEWRHRSVAYGYMVASAGA
Ga0126382_1251618623300010047Tropical Forest SoilMTDEREIWIRHFFYLALFAAAFHTLQFLAALLLWMRTGSAALMAFGLDAVVSAIAALVLASRIRKEWRHRSVAYGY
Ga0134082_1029560213300010303Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAAAALVLAARIQRDW
Ga0134109_1012932713300010320Grasslands SoilMMPTGMIEERAIWIRHFCCLAIFAGTFHSLQFLASVLLWAGTNSAALMAYGLDAIVSAAAALVLATRIPRDWRNRFVAYGYMTAAASSLYLGASTLWLGRWPRTSMLGIVVAA
Ga0126370_1135429913300010358Tropical Forest SoilMVDERGTWIRHFFYLALFAAAFHGLEFIASFLLWRATSSAALMAYGLDALASAFAAVFLGVRFEREWCNKFVAYVYMLAVALSFYLG
Ga0126376_1213111323300010359Tropical Forest SoilMTDEREIWIRHFFYLALFAAGFHALQFIASLLLWMSTRSAALMSFGLDAVVSAVAALVLAARIRKEWRHRS
Ga0126376_1279332513300010359Tropical Forest SoilMSDERETWIRHFLYLALFAAAFHTLQFLAALFLWMSTRSAVLMSFGLDAVVSAVAALVLAARIRREWRHRSVAYGYIVASAGAF*
Ga0126372_1075886923300010360Tropical Forest SoilMVDDRETWIRHFFYLALFAALFHSLQFVAALVLWMSTRSAALMSFGLDAVVSAIAALVLATRIRREW
Ga0126372_1140180813300010360Tropical Forest SoilMVDERGTWIRHFFYLALFAAAFHGLQFIASFLLWRATSSAALMAYGLDALASAFAAVFLVVRLEREWRNKFVAYAYLLAAALSFYLGISMLWTGRRPQTSVLGIVVAAVS
Ga0126378_1074269323300010361Tropical Forest SoilMTDERETWIRHFFYLVLFAAAFHTLQFLAALFLWMSTRSAALMAFGLDAVVSAVAALVLTARIPKEWRHRSVAYGYIVAAAGAFYLGAS
Ga0126377_1332801613300010362Tropical Forest SoilMTDERETWLRHFLYLALFAAAFHALQFVASLVLWLKTESAALMSYGLDALVSAIAALVLARNIQREWRKKFVAYGYMAASAGAFYLGASMLWTGRRPQASVLGIAVAAVSML
Ga0136847_1349382813300010391Freshwater SedimentMSDDRQTWIRHSFYLAIFTAVFHGLQFVASLALWMRTDSPALMSFGLDAFVSAVAALVLASRIQREWRNRFVAYGYMAASVVAFYRGGSMLW
Ga0134124_1199661513300010397Terrestrial SoilMADERETWIRHFFYLALFASAFHALQFLASFILWRNTRSAVLMSYGLDALVSSGAALVL
Ga0126383_1151125923300010398Tropical Forest SoilMADERETWVRQFLYLALFAAAFHTLQFIASFLLWMRSHSAALISYGFDAAVSATAAFVLARTIQREWRKKFVAYGYMGAAAATLYAGGSMLWNG
Ga0126383_1163453723300010398Tropical Forest SoilMTDTRETWIRHFFYLALFAAIFHSLQFLASLLLWINTNSAALMAYGLDAIVSAMAALVLASRLRRDWRNKFVAYAYMLAAALSFYLG
Ga0134123_1273211513300010403Terrestrial SoilMTDERETWIRHFLYLALFASVFHTLQFFASLVLWRNTRSAVLLSYGLDAVVSAAAALVMAVRVQREWRNK
Ga0150983_1130157113300011120Forest SoilMTEERETWIRHLFYLALFTASFHSLQFLASFSLWISTNSAALMSYGLDALVSAVAALMLARKIQGEWRNKFVAYGYMVASAGALYFG
Ga0137327_109065023300012173SoilMTSERETWIRHFLYLALFAAAFHSLQFLASLALWMSSRSPALMSYGLDAAVSAIAALVLAVRVRREWRNKFVAYAYMAAAAGSFYLGASMLWRGERP
Ga0137380_1029397113300012206Vadose Zone SoilLTEDREIWIRYFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSA
Ga0137381_1104845413300012207Vadose Zone SoilMTHERLEGAQEEDDREIWRRHFFYLALFAAAFHTLQFLASFLLWKTTASPVLMSFGLDAAVSAIAAT
Ga0137377_1025885023300012211Vadose Zone SoilLTEDREIWIRHFFFLAIFAGTFHSFQFLASVLLWPGTNSAALLSYGLDAVVSAVAALVLAAR
Ga0137387_1007019113300012349Vadose Zone SoilMTDDREIWIRQFFHLALFTAFFHALQFVASLLLWIATSSSALMAFGLDALVSAAAAVIFAVRIQRGWRNRFVAY
Ga0137384_1142743713300012357Vadose Zone SoilMTSERETWLRHFLYLALFAAAFHSLQFLASVLLWRTTNSAVLMSYGLDAVVSAVAALVLAARMQ
Ga0137385_1041999323300012359Vadose Zone SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAVAALVLAARIQRDWRNKFVAYGYIAAAAASLYLGASILWLRRWPKTSALGIGVAAISRL
Ga0137360_1019698523300012361Vadose Zone SoilMSIPQADEHETWIRQFFHLALFTAVFHLLQFTASLLLWISTNSAALMSFGFDALVSAIAALCLAARIEREWRNRFVAFGYLAASAGAV
Ga0134042_111238513300012373Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAAAALV
Ga0134061_107730423300012399Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWATSSAALLSYGLDAVVSAAAALVLATRIQ
Ga0134050_109651323300012407Grasslands SoilLTEDREIWIRHCFYLAIFAGTFHSFQFLASVLLWAGTSSAALLSYGLDAVVSAAAALVLATRIQRDWRNKFVAYGYIAAAAASLYLGASILWLRHWPKT
Ga0137394_1132013913300012922Vadose Zone SoilMSIPQADEHETWIRQFFHLALFTAVFHLLQFTASLLLWMSTNSAALMSFGLDALVSAIAALCLAARIEREWRNRFVAFGYLAASAGAVYLG
Ga0126375_1147452523300012948Tropical Forest SoilMVDDRETWIRHFFYLALFAALFHSLQFVAALVLWMSTRSAALMSFGLDAVVSAIAALVLATRIRREWRHRSVAYGYIVASAGAFYLGASMLWTGLR
Ga0134076_1041358323300012976Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTSSAALLSYGLDAVVSAAAALVLATRIQRDWRNKFVAYG
Ga0157378_1090806913300013297Miscanthus RhizosphereMTDERETWIRHFLYLALFASGFHTLQFLASLVLWRNTRSAVLLSYGLDAVVSAAAALVMAVRVQREWRNKFVAYGYIA
Ga0134081_1009968713300014150Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAVAALVLAARIQRDWRNKFVAYGYIAAAAASLYL
Ga0134075_1003013433300014154Grasslands SoilLTEEREIWIRHFFYLAIFAGGFHSLQFLASVLLWSSTNSAALMSFGFDAAVSAGAALVLATRIQRDWRNRFVA
Ga0134075_1005857913300014154Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGFDAVVSAAAALVLAARIQRDWRNKFVAYGYIAAAAASLY
Ga0134072_1046326113300015357Grasslands SoilMTDDRETWVRHFVYLAVFAATFHSLQFLASLILWIGTSSAALMAYGLDAVVSAFAAVVLAVKIQREWRNKFVAYGY
Ga0134085_1003503233300015359Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTSSAALLSYGLDAVVSAAAALVLATRIQRDWRNKFV
Ga0134085_1027099723300015359Grasslands SoilMTSERETWLRHFLYLALFAAAFHSLQFLASVLLWRTTNSAVLMSYGLDAVVSAVAALVLAARIQREWRNKFVAYSYMA
Ga0134085_1036656423300015359Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAAAALVLAARIQRD
Ga0132256_10351837513300015372Arabidopsis RhizosphereMNEDRETWIRHFLYLALFAACFHTLQFIASLILWKNSRSAVLLSFGLDAVVSAFAALVLAARVQREWRNKYVAYGYLAAAAGAFY
Ga0182036_1063924213300016270SoilMTDERGTWIRHFLYLALFAAVFHSLQFAASFVLWRTTNSAALMAYGLDAIVSALAALVLAARLEREWRNKFVAYGY
Ga0182041_1190313313300016294SoilMMADERATWIRHFFYLALFAAAFHSLQFLASLMLWFRTNSAALLAYGLDAIVSAFAALVLALRLEREWRNKFVAY
Ga0182033_1102880413300016319SoilLTEDRDIWIRHFFYLALFAAAFHSLQFLASLWLWTLTKSAALMSYGLDAVVSATAALVLAARIHRDWRNKFVAYGYMAAAAGAFYLGVSMLWSGRWPKPDVPGI
Ga0182034_1095943713300016371SoilLTEDRDIWIRHFFYLALFAAAFHSLQFLASLWLWTLTKSAALMSYGLDAVVSATAAL
Ga0182038_1009583533300016445SoilMMADERATWIRHFLYLAVFAAVFHSLQLAASFALWRTTNSAALMAYGLDAIVSASAALVL
Ga0182038_1189194213300016445SoilMTDEREIWIRHFFYLALFASVFHALQFLASLALWKSTGSAVLMAYGLDAIVSSVAALVLAARVQREWRNKFVAYGYMAVAAVVLYLGVSMFWRGQRPKATALGIVVAAVS
Ga0134074_107031223300017657Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTSSAALLSYGLDAVVSAAAALVLATRIQRDWRN
Ga0134083_1054056313300017659Grasslands SoilLTEEREIWIRHFFYLAIFAGGFHSLQFLASVLLWSSTNSAALMSFGFDAAVSAGAALVLATRIQRDWRNRFVAYGYMM
Ga0066667_1048099223300018433Grasslands SoilMPTGMIEERAIWIRHFCCLAIFAGTFHSLQFLASVLLWAGTNSAALMAYGLDAIVSAAAALVLATRIPRDWRNRFVAYGYMTAAASSLYLGAST
Ga0066669_1095551813300018482Grasslands SoilMADERETWIRHFFYLALFAAAFHSLQFLASLMLWISTNSAALMAYGLDAAVSAVASLVLAARIQQEWRNKFVAYGYMAASA
Ga0210402_1097703423300021478SoilMTDEREIWVRHFFYLALFAASFHSLQFLASVTLWITTSSPALMAYGLDAVVSAAAAMVLAARIQR
Ga0207700_1182135123300025928Corn, Switchgrass And Miscanthus RhizosphereMVDERGTWIRHFFYLALFAAAFHGLQFIASFLLWRATSSAALMAYGLDAVVSAFAAVCLALRLEREWRNKFVAYAYMLAAALSF
Ga0207674_1128996113300026116Corn RhizosphereMTDERETWIRHFLYLALFAAAFHSLQFLASLVLWRSTRSPALMSYGLDAVVSAIAALILAGRVQREWRNKFV
Ga0209469_107730723300026307SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTSSAALLSYGLDAVVSAAAALVLATRIQRDWRNKFVAYGYIAAAAASLYLGA
Ga0209761_100859873300026313Grasslands SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGFDAVVSAAAALVLAARIQRDWRNKFVAYGYIAAAAASLYLGASILWLRRWPKTS
Ga0209801_127330613300026326SoilMPTGMIEERAIWIRHFCCLAIFAGTFHSLQFLASVLLWAGTNSAALMAYGLDAIVSAAAALVLATRIPRDWRNRFVAHGYMTAAAGSLYLGASTLWLGQWPRTSMLGIVVAAISM
Ga0209159_118695413300026343SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAAAALVLAVRIQRDWRSKFVAYGYIAA
Ga0209690_119747413300026524SoilMTEDREIWIRHSFYLALFAASFHSLQFLASFSLWISTNSAALMSYGLDALVSAVAALVLAHKIQGEWRNKFVAY
Ga0209690_125553113300026524SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGFDAVVSAAAALVLAARIQRDWRNKFVAYGYIAAAAASLYLGASILWLRRWPKTSALGIG
Ga0209156_1038978413300026547SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAAAALVLAARIQRDWRNKFVAYGYIAAAAASLYLGASILWLRRWPKTSALGIGV
Ga0209726_1041137813300027815GroundwaterMADDRETWIRHSFQLALFTTAFHSLQFGASLLLWSSTRSASLMAFGLDAFVSAVAALVLALRIQREWRHRFVAYGYMAASLVAFYLGASMLWNGERPA
Ga0209488_1101895423300027903Vadose Zone SoilSRTMSDERETWIRHFFYLALFAASFHSLQFLASFLLWISTSSAALLSYGLDAAVSAVAALSLSRRIRGEWRNKFVACGYLAASAAAFYFGVSMLWSGRWPKTSILGIVVSAV
Ga0209382_1211613513300027909Populus RhizosphereMTSERETWIRHFFYLALFAAGFHGLQFLAALILWMRTKSAAVMSYGFDAVVSVIAALILAGHIQREWRNKFVAYGYLAASAGAFYLGASMLWRGDRPQPTVLGIVL
Ga0209062_109958123300027965Surface SoilMVDEREVWIRHFFYLALFAAFFHALQFAAAFFLWRSTGSAALIAYGLDAIVSAVAAVFLAGRLQHEW
Ga0307469_1056693823300031720Hardwood Forest SoilLTEDREIWIRHFFYLAIFAGTFHSFQFLASVLLWAGTNSAALLSYGLDAVVSAAAAMVLATRIQRDWRNKFVAYGYIAAASVSLYLGASILWLRRWPETSALGIGVAA
Ga0306925_1181360723300031890SoilMTDTRETWLRHFLYLAFFAAVFHGLQFTASVLLWINTNSAALMAYGLDAIVSAGAALVLAARLRRDWRNKFVAYAYMLAAALSFYLGASM
Ga0310916_1064855013300031942SoilLTEDRDIWIRHFFYLALFAAAFHSLQFLASLWLWTLTKSAALMSYGLDAVVSATAA
Ga0306926_1021365433300031954SoilMTDERGTWIRHFLYLAVFAAVFHSLQFAASFVLWRTTNSAALMAYGLDAIVSALAALVLAARLEREWRNKFVAYGYMLAAALSFYLGASMLWTGRRPR
Ga0310911_1048913613300032035SoilLTEDRDIWIRHFFYLALFAAAFHSLQFLASLWLWTLTKSAALMSYGLDAVVSATAALVLAARIHRDWRNKFVAYGYMAAAAGAFYLGVSMLWSGRWPK
Ga0306920_10350883713300032261SoilMPAIHFPPMTDEREIWIRHFFYLALFASVFHALQFLASLALWKSTGSAVLMAYGVDAIVSSVAALVLAARVQREWRNKFVAYGYMAAAAVVLYLGV
Ga0310812_1032870713300032421SoilMTDERETWIRHFFYLALFASAFHALQFLASFILWRNTRSAVLMSYGLDALVSSGAALVLAARVQREWRNKFVAYGYMAASLVVLY

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.