Metagenome / Metatranscriptome Family F100694

Basic Information
Family ID	F100694
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	79 residues
Representative Sequence	TLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSTIA
Number of Associated Samples	86
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	11.76 %
% of genes from short scaffolds (< 2000 bps)	11.76 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (95.098 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (27.451 % of family members)
Environment Ontology (ENVO)	Unclassified (58.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (60.784 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 58.97% Coil/Unstructured: 41.03%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02195	ParBc	3.92
PF04466	Terminase_3	2.94
PF16677	GP3_package	1.96
PF16510	P22_portal	1.96
PF11134	Phage_stabilise	1.96
PF02178	AT_hook	0.98
PF11651	P22_CoatProtein	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	2.94

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
All Organisms	root	All Organisms	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
Viruses	superkingdom	All Organisms → Viruses	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.90 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001851\|RCM31_10269182	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	554	Open in IMG/M
3300004481\|Ga0069718_16377535	Not Available	1067	Open in IMG/M
3300007542\|Ga0099846_1328488	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	521	Open in IMG/M
3300009085\|Ga0105103_10412458	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	749	Open in IMG/M
3300009146\|Ga0105091_10168478	Not Available	1033	Open in IMG/M
3300010370\|Ga0129336_10369548	Not Available	787	Open in IMG/M
3300017766\|Ga0181343_1181967	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	579	Open in IMG/M
3300019784\|Ga0181359_1130241	Not Available	888	Open in IMG/M
3300025091\|Ga0209616_1021097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	659	Open in IMG/M
(restricted) 3300028557\|Ga0247832_1260446	Not Available	580	Open in IMG/M
(restricted) 3300028559\|Ga0247831_1259609	Not Available	603	Open in IMG/M
3300031857\|Ga0315909_10811135	Not Available	590	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.02%
Terrestrial	Environmental → Terrestrial	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	93.14%
Marine	Environmental → Aquatic → Marine	4.90%
Aquaculture	Environmental → Aquatic → Aquaculture	0.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.98%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	35.29%
Lake	Environmental → Aquatic → Freshwater → Lake	28.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	18.63%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.90%
Coastal	Environmental → Aquatic → Marine → Coastal	3.92%
River	Environmental → Aquatic → Freshwater → River	2.94%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.96%
Ice	Environmental → Aquatic → Freshwater → Ice	0.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Aquaculture → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	33.33%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	27.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	18.63%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.96%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Aquaculture → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	27.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	17.65%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.86%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.92%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.94%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.94%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.94%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.98%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.98%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.98%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.98%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.98%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.98%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.98%
Aquarium Water	Environmental → Aquatic → Aquaculture → Unclassified → Unclassified → Aquarium Water	0.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.98%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001849	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM26, ROCA_DNA190_2.0um_MCP-N_C_2b	Environmental	Open in IMG/M
3300001851	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006037	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008459	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - July 8, 2014 all contigs	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300011184	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019781	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM15.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020533	Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300024358	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepA_8d	Environmental	Open in IMG/M
3300024509	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8d	Environmental	Open in IMG/M
3300024559	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025091	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)	Environmental	Open in IMG/M
3300027518	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027977 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12m	Environmental	Open in IMG/M
3300028114 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_13.5m	Environmental	Open in IMG/M
3300028557 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_4m	Environmental	Open in IMG/M
3300028559 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_1m	Environmental	Open in IMG/M
3300029156	Aquariaum water viral communities from Chicago, USA - Oceanarium - OC2	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM26_11649601	3300001849	Marine Plankton	TWSNASFLRVTNSGTGEIGTFAAMPAASATGVFRTKSGTPACTHTIPVTSGGTTYYIMVSTIA*
RCM31_102691823	3300001851	Marine Plankton	ASGGTWSNASFVRVTNSGTGTIGTFASFPAAAVDGVFRAKVGTPAATHTIPVVSNGTTYYIMVSTIA*
B570J29032_1097124315	3300002408	Freshwater	RATIGGSSTNPGGTLAALQLDSDFATGGTWSNASFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTVA*
JGI25907J50239_11103331	3300003394	Freshwater Lake	TWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA*
Ga0065166_104402802	3300004112	Freshwater Lake	PGGTLAALQLDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA*
Ga0069718_163775354	3300004481	Sediment	ASGGTWTNASFLRVTNSGTGTLGNFAAFPAAATTGVFRAAVGTPAATHTIPVTSGGVTYYIMVSTIA*
Ga0049083_103277473	3300005580	Freshwater Lentic	SDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA*
Ga0049080_100710381	3300005582	Freshwater Lentic	LDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSTIA*
Ga0078894_116938923	3300005662	Freshwater Lake	LDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA*
Ga0075465_100661194	3300006037	Aqueous	SFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTVA*
Ga0070749_104908124	3300006802	Aqueous	NSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA*
Ga0099846_13284882	3300007542	Aqueous	AANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGTFAVMPAVSATGVFRAAVGSPVVTHTIPVKSGSTTYYIMVSTVA*
Ga0114364_10345813	3300008267	Freshwater, Plankton	LAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA*
Ga0114865_11622713	3300008459	Freshwater Lake	SGAANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA*
Ga0105098_107682811	3300009081	Freshwater Sediment	IGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAAVGLPAATHTIPVVSGGTTYYIMVSTIA*
Ga0105103_104124584	3300009085	Freshwater Sediment	NPGGTLAALQLDSDIASGGTWSNASFLRVTNSGTGTLGNFAAFPAAATTGVFRAAVGTPAPTHTIPVTSGGVTYYIMVSTIA*
Ga0105103_108522662	3300009085	Freshwater Sediment	HISTAVNTGGTINGAANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHCIPVVSGGTTYYIMVSTIA*
Ga0105091_101684781	3300009146	Freshwater Sediment	LDSDIASGGTWSNASFLRVTNSGTGTLGNFAAFPAAATTGVFRAAVGTPAATHTIPVTSGGVTYYIMVSTIA*
Ga0105091_104562371	3300009146	Freshwater Sediment	STAVNTGGTISGAANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAAVGSPVVTHTIPVVSGGTTYYIMVSTVA*
Ga0114968_104885411	3300009155	Freshwater Lake	TIGGSSTNPGGTLAALQLDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA*
Ga0105102_100197881	3300009165	Freshwater Sediment	GTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHCIPVVSGGTTYYIMVSTIA*
Ga0105102_100680761	3300009165	Freshwater Sediment	LRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYIMVSTIA*
Ga0105102_102957071	3300009165	Freshwater Sediment	NAIRATIGGSSTNPGGTLAALQLDSDFASGGTWSNTSFLRVTNSGTGLVENFAAMPPVNVAGVFRAVVGIPAATHTIPITSGGTTYYIMVSTIA*
Ga0105102_108747501	3300009165	Freshwater Sediment	RVTNSGTGEVGNFAEMPAVSATGVFRAKVGSPVVSHCIPVVSGGTTYYIMASTIA*
Ga0105104_103789314	3300009168	Freshwater Sediment	SVNTGGTISGAANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA*
Ga0105097_101905171	3300009169	Freshwater Sediment	AANAIGATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHCIPVVSGGTTYYIMVSTIA*
Ga0105097_107030871	3300009169	Freshwater Sediment	IGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA*
Ga0105096_102381514	3300009170	Freshwater Sediment	ANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSVTGEVGNFALMPAVSATGVFRAKVGSPVVSHCIPVVSGGTTYYIMVSTIA*
Ga0105096_102829394	3300009170	Freshwater Sediment	ANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA*
Ga0114979_101676034	3300009180	Freshwater Lake	STNPGGTLAALQLDSDFATGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHCIPVISGGTTYYIMVSTIA*
Ga0114974_101465031	3300009183	Freshwater Lake	ISGAANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA*
Ga0114967_100731971	3300010160	Freshwater Lake	SFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA*
Ga0129336_103695481	3300010370	Freshwater To Marine Saline Gradient	NGAHISLSINDSGTISGAGNALRVTLGGSSTAPGGTISAIQLDSDFASGGSWSGATYLRCTNSGTGTVGALLRVPAPAVAGVFRAAVGSPSVTHTIPVISDNGTTYYIMCSTVA*
Ga0136709_10641403	3300011184	Freshwater	TWSNTSFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTVA*
Ga0153805_10731191	3300012013	Surface Ice	VNTGGTISGAANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA*
Ga0164292_108403183	3300013005	Freshwater	SDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPIVTHTIPVISGGTTYYIMVSTVA*
Ga0181363_10744121	3300017707	Freshwater Lake	NSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTVA
Ga0181350_10635404	3300017716	Freshwater Lake	GGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSTIA
Ga0181347_11538461	3300017722	Freshwater Lake	TLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSTIA
Ga0181362_10621751	3300017723	Freshwater Lake	TWTNASFLRVTNSGTGTLGNFAAFPAAATTGVFRAAVGTPSATHTIPVTSGGVTYYIMVSTIA
Ga0181352_10109581	3300017747	Freshwater Lake	LDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0181352_10307291	3300017747	Freshwater Lake	GTWTNTSFLRVTNSGTGEVGNFAVMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYIMVSTVA
Ga0181352_11769571	3300017747	Freshwater Lake	GTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVISGGTTYYIMVSTVA
Ga0181344_10688766	3300017754	Freshwater Lake	SDFASGGTWSNASFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYIMVSTVA
Ga0181343_11819671	3300017766	Freshwater Lake	ESLSINGSGTISGAGNALRATIGGSSTNPGGTLAALQLDSDFASGGTWSNASFIRVTNSGTGTIGTFASFPAAAVDGVFRAKVGSPAVTHTIPVVSNGTTYYIMVSTIA
Ga0181358_10098781	3300017774	Freshwater Lake	DFASGGTWSNASFMRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYIMVSTVA
Ga0181349_12322713	3300017778	Freshwater Lake	GTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0181355_13235312	3300017785	Freshwater Lake	QLDSDFASGGTWSNTSFLRVTNSGTGEIGTFAVMPAVSATGVFRAAVGTPAATHTIPVKSGATTYYIMVSTIA
Ga0181360_1191431	3300019781	Freshwater Lake	GGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0181359_10471431	3300019784	Freshwater Lake	GQLDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0181359_10882824	3300019784	Freshwater Lake	FASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0181359_11302414	3300019784	Freshwater Lake	AFLRVTNSGTGTLGNFAAFPAAATTGVFRAAVGTPSATHTIPVTSGGVTYYIMVSTIA
Ga0211734_109195521	3300020159	Freshwater	NTGGTISGAANAIRATIGGSSTNPGGTLAALQLDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0211733_103912851	3300020160	Freshwater	TIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSSIA
Ga0211726_103403381	3300020161	Freshwater	NPGGTLAALQLDSDFATGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0211729_101175311	3300020172	Freshwater	DSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0208364_10418153	3300020533	Freshwater	TSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTIA
Ga0222714_101611185	3300021961	Estuarine Water	TVNGAHISLSINGSGTISGAGNALRVTLGGTSTAPGGTISAIQLDSDFASGGSWSGATYLRCTNSGTGTVGALLRVPAPAAAGVFRAAVGTLAGTHTIPVISDNGTTYYIMCSTIA
Ga0181353_10102511	3300022179	Freshwater Lake	TISGAANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0181354_11800423	3300022190	Freshwater Lake	DGAHISTSVNTGGTISGAANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVISGGTTYYIMVSTVA
Ga0181354_12260171	3300022190	Freshwater Lake	KEVNGAHISLSINGSGTISGAGNALRVTLGGSSTAPGGTISAIQLDSDFASGGSWSGATYLRCTNSGTGTVGAFLRVPAPAVAGVFRAAVGSPSVTHTIPVISDNGTTYYIMCSTVA
Ga0214917_103263704	3300022752	Freshwater	SSTNPGGTLAALQLDSDFASGGTWSNTSFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGTPACTHTIPVTSGGTTYYVMVSTIA
Ga0255173_10699513	3300024358	Freshwater	GGTWSNASFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTVA
Ga0255175_10413425	3300024509	Freshwater	NAIRATIGGSSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTVA
Ga0255284_11336301	3300024559	Freshwater	NASFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTVA
Ga0209616_10210971	3300025091	Freshwater	SFLRVTNSGTGTLGNFAALPAVAVDGVFRAKVGSPVVTHTIPVTSGGVTYYIMVSTVA
Ga0208787_11042421	3300027518	Deep Subsurface	SGTISGAGNALRVTLGGSSTAPGGTISAIQLDSDFASGGSWSGATYLRCTNSGTGTVGALLRVPAPAVAGVFRAAVGSPTVTHTIPVISDDGTTYYIMCSTVA
Ga0208951_11758121	3300027621	Freshwater Lentic	TLAALQLDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0208975_11073051	3300027659	Freshwater Lentic	PGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0209704_11794354	3300027693	Freshwater Sediment	TNSGTGEVGNFALMPAVSATGVFRAAVGSPEVTHTIPVVSGGTTYYIMVSTVA
Ga0209443_12913022	3300027707	Freshwater Lake	AANAIRATIGGSSTNPGGTLAALQLDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0209442_10707731	3300027732	Freshwater Lake	GGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0209593_101349381	3300027743	Freshwater Sediment	PGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAAVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0209088_101472204	3300027763	Freshwater Lake	TWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHCIPVISGGTTYYIMVSTIA
Ga0209768_100956436	3300027772	Freshwater Lake	GGSSTNPGGTLAALQLDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0209500_100305091	3300027782	Freshwater Lake	PGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHCIPVISGGTTYYIMVSTIA
Ga0209500_100361336	3300027782	Freshwater Lake	ANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0209246_100345891	3300027785	Freshwater Lake	LQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0209287_102619034	3300027792	Freshwater Sediment	DSDIASGGTWSNASFLRVTNSGTGTLGNFAAFPAAATTGVFRAAVGNPAATHTIPVTSGGVTYYIMVSTIA
Ga0209353_102413491	3300027798	Freshwater Lake	ATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0209229_104722412	3300027805	Freshwater And Sediment	SGTISGAANAIRATIGGSSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGTFAVMPAVSATGVFRAAVGSPVVTHTIPVKSGSTTYYIMVSTVA
Ga0209354_100405071	3300027808	Freshwater Lake	RVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0209253_111574203	3300027900	Freshwater Lake Sediment	SFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYIMVSTIA
Ga0209079_103247901	3300027972	Freshwater Sediment	TWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAAVGLPAATHTIPVVSGGTTYYIMVSTVA
(restricted) Ga0247834_11339505	3300027977	Freshwater	GGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
(restricted) Ga0247835_12588621	3300028114	Freshwater	AALQLDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
(restricted) Ga0247832_12604461	3300028557	Freshwater	TNSGTGTIGNFAALPAVAVDGVFRAKVGSPVVSHTIPVTSGGVTYYIMVSTIA
(restricted) Ga0247831_12596093	3300028559	Freshwater	LRVTNSGTGTIGNFAALPAVAVDGVFRAKVGSPVVSHTIPVTSGGVTYYIMVSTIA
Ga0168038_1036024	3300029156	Aquarium Water	TWSNTSFLRVTNSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTVA
Ga0315291_115051542	3300031707	Sediment	DFATGGTWSNTSFMRVTNSGTGEVENFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYVMVSTVA
Ga0315909_108111351	3300031857	Freshwater	SINGSGTISGAGNALRVTLGGSSTAPGGTISAIQLDSDFASGGSWSGATYLRCTNSGTGTIGALLRVPAPAVAGVFRAAVGSPSVTHTIPVISDNGTTYYIMCSTVA
Ga0315901_106001891	3300031963	Freshwater	SSTNPGGTLAALQLDSDFATGGTWSNASFMRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVVSGGTTYYIMVSTVA
Ga0315903_112116561	3300032116	Freshwater	TISGAGNALRVTLGGSSTAPGGTISAIQLDSDFASGGSWSGATYLRCTNSGTGTIGALLRVPAPAVAGVFRAAVGSPSVTHTIPVISDNGTTYYIMCSTVA
Ga0334996_0482802_1_171	3300033994	Freshwater	LRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0334987_0315252_25_258	3300034061	Freshwater	LAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA
Ga0335010_0155753_1116_1442	3300034092	Freshwater	STSVNTGGTISGAANAIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVTHTIPVISGGTTYYIMVSTVA
Ga0335010_0395230_1_297	3300034092	Freshwater	SGAANAIRATIGGSSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGTFAVMPAASATGVFRAAVGSPSVTHTIPIRSGSTTYYIMVSTVA
Ga0335031_0155436_3_257	3300034104	Freshwater	STNPGGTLAALQLDSDFASGGTWTNASFLRVTNSGTGAIGNFIAMPAANVAGVFRAAVGTPAATHTIPITSGGTTYYIMVSTIA
Ga0335031_0385599_1_189	3300034104	Freshwater	WTNASFLRVTNSGTGTLGNFAAFPAAATTGVFRAAVGTPAATHTIPVTSGGVTYYIMVSTIA
Ga0335031_0515373_355_678	3300034104	Freshwater	LSVNTGGTISGAGNALRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTDSGTGEVGNFAAMPAVSATGVFRAKVGSPVVTHTIPVTSGGTTYYIMVSTIA
Ga0335049_0876609_308_478	3300034272	Freshwater	LRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSTIA
Ga0335013_0261311_835_1116	3300034284	Freshwater	AIRATIGGTSTNPGGTLAALQLDSDFASGGTWSNASFLRVTNSGTGEVGNFALMPAVSATGVFRAKVGSPVVSHTIPVVSGGTTYYIMVSSIA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100694

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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