NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F100782

Metagenome / Metatranscriptome Family F100782

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100782
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 59 residues
Representative Sequence ATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Number of Associated Samples 83
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Archaea
% of genes with valid RBS motifs 1.96 %
% of genes near scaffold ends (potentially truncated) 98.04 %
% of genes from short scaffolds (< 2000 bps) 85.29 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Archaea (99.020 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(35.294 % of family members)
Environment Ontology (ENVO) Unclassified
(63.725 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.647 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.67%    β-sheet: 8.33%    Coil/Unstructured: 50.00%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF12710HAD 19.61
PF08282Hydrolase_3 12.75
PF01380SIS 7.84
PF06745ATPase 3.92
PF01381HTH_3 1.96
PF00155Aminotran_1_2 1.96
PF00254FKBP_C 0.98
PF00211Guanylate_cyc 0.98
PF01850PIN 0.98
PF13772AIG2_2 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 12.75
COG1877Trehalose-6-phosphate phosphataseCarbohydrate transport and metabolism [G] 12.75
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 12.75
COG3769Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamilyCarbohydrate transport and metabolism [G] 12.75
COG0560Phosphoserine phosphataseAmino acid transport and metabolism [E] 12.75
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.98


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10032314All Organisms → cellular organisms → Archaea1842Open in IMG/M
3300002558|JGI25385J37094_10195332All Organisms → cellular organisms → Archaea542Open in IMG/M
3300002909|JGI25388J43891_1033838All Organisms → cellular organisms → Archaea822Open in IMG/M
3300002911|JGI25390J43892_10017273All Organisms → cellular organisms → Archaea1722Open in IMG/M
3300002912|JGI25386J43895_10136849All Organisms → cellular organisms → Archaea608Open in IMG/M
3300005167|Ga0066672_10131108All Organisms → cellular organisms → Archaea1558Open in IMG/M
3300005167|Ga0066672_10601377All Organisms → cellular organisms → Archaea712Open in IMG/M
3300005171|Ga0066677_10042020All Organisms → cellular organisms → Archaea2246Open in IMG/M
3300005174|Ga0066680_10256465All Organisms → cellular organisms → Archaea1112Open in IMG/M
3300005176|Ga0066679_10638877All Organisms → cellular organisms → Archaea694Open in IMG/M
3300005180|Ga0066685_10078055All Organisms → cellular organisms → Archaea2180Open in IMG/M
3300005181|Ga0066678_10002250All Organisms → cellular organisms → Archaea7921Open in IMG/M
3300005186|Ga0066676_10577907All Organisms → cellular organisms → Archaea761Open in IMG/M
3300005445|Ga0070708_100079762All Organisms → cellular organisms → Archaea2961Open in IMG/M
3300005445|Ga0070708_100933158All Organisms → cellular organisms → Archaea814Open in IMG/M
3300005446|Ga0066686_10769229All Organisms → cellular organisms → Archaea644Open in IMG/M
3300005447|Ga0066689_10282045All Organisms → cellular organisms → Archaea1028Open in IMG/M
3300005450|Ga0066682_10688970All Organisms → cellular organisms → Archaea629Open in IMG/M
3300005540|Ga0066697_10114690All Organisms → cellular organisms → Archaea1577Open in IMG/M
3300005540|Ga0066697_10629065All Organisms → cellular organisms → Archaea593Open in IMG/M
3300005554|Ga0066661_10821525All Organisms → cellular organisms → Archaea544Open in IMG/M
3300005557|Ga0066704_10124879All Organisms → cellular organisms → Archaea1710Open in IMG/M
3300005568|Ga0066703_10751699All Organisms → cellular organisms → Archaea559Open in IMG/M
3300005574|Ga0066694_10279420All Organisms → cellular organisms → Archaea794Open in IMG/M
3300005586|Ga0066691_10587764All Organisms → cellular organisms → Archaea662Open in IMG/M
3300006034|Ga0066656_10044479All Organisms → cellular organisms → Archaea2538Open in IMG/M
3300006034|Ga0066656_10301429All Organisms → cellular organisms → Archaea1034Open in IMG/M
3300006046|Ga0066652_100744376All Organisms → cellular organisms → Archaea935Open in IMG/M
3300006796|Ga0066665_11084351All Organisms → cellular organisms → Archaea611Open in IMG/M
3300007255|Ga0099791_10520122All Organisms → cellular organisms → Archaea579Open in IMG/M
3300007258|Ga0099793_10529358All Organisms → cellular organisms → Archaea587Open in IMG/M
3300007258|Ga0099793_10662381All Organisms → cellular organisms → Archaea525Open in IMG/M
3300007258|Ga0099793_10723542All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon502Open in IMG/M
3300009012|Ga0066710_100189748All Organisms → cellular organisms → Archaea2912Open in IMG/M
3300009012|Ga0066710_101169111All Organisms → cellular organisms → Archaea1191Open in IMG/M
3300009038|Ga0099829_10913982All Organisms → cellular organisms → Archaea728Open in IMG/M
3300009038|Ga0099829_11267533All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon610Open in IMG/M
3300009088|Ga0099830_10170210All Organisms → cellular organisms → Archaea1688Open in IMG/M
3300009090|Ga0099827_11643212All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon560Open in IMG/M
3300009137|Ga0066709_101370216All Organisms → cellular organisms → Archaea1031Open in IMG/M
3300010117|Ga0127449_1057109All Organisms → cellular organisms → Archaea549Open in IMG/M
3300010303|Ga0134082_10057401All Organisms → cellular organisms → Archaea1500Open in IMG/M
3300010303|Ga0134082_10489976All Organisms → cellular organisms → Archaea535Open in IMG/M
3300010329|Ga0134111_10519163All Organisms → cellular organisms → Archaea525Open in IMG/M
3300010335|Ga0134063_10066427All Organisms → cellular organisms → Archaea1598Open in IMG/M
3300010335|Ga0134063_10532359All Organisms → cellular organisms → Archaea591Open in IMG/M
3300010335|Ga0134063_10780236All Organisms → cellular organisms → Archaea500Open in IMG/M
3300010366|Ga0126379_13481236All Organisms → cellular organisms → Archaea527Open in IMG/M
3300011270|Ga0137391_10264939All Organisms → Viruses → Predicted Viral1487Open in IMG/M
3300012189|Ga0137388_10483375All Organisms → cellular organisms → Archaea1150Open in IMG/M
3300012198|Ga0137364_11176172All Organisms → cellular organisms → Archaea575Open in IMG/M
3300012206|Ga0137380_10208116All Organisms → cellular organisms → Archaea1772Open in IMG/M
3300012206|Ga0137380_11253612All Organisms → cellular organisms → Archaea626Open in IMG/M
3300012207|Ga0137381_10191290All Organisms → cellular organisms → Archaea1772Open in IMG/M
3300012207|Ga0137381_10769791All Organisms → cellular organisms → Archaea835Open in IMG/M
3300012210|Ga0137378_10817909All Organisms → cellular organisms → Archaea844Open in IMG/M
3300012211|Ga0137377_11045028All Organisms → cellular organisms → Archaea747Open in IMG/M
3300012349|Ga0137387_10698182All Organisms → cellular organisms → Archaea734Open in IMG/M
3300012395|Ga0134044_1216232All Organisms → cellular organisms → Archaea654Open in IMG/M
3300012397|Ga0134056_1144823All Organisms → cellular organisms → Archaea790Open in IMG/M
3300012918|Ga0137396_10001592All Organisms → cellular organisms → Archaea12041Open in IMG/M
3300012925|Ga0137419_10675937All Organisms → cellular organisms → Archaea836Open in IMG/M
3300012944|Ga0137410_10188781All Organisms → cellular organisms → Archaea1590Open in IMG/M
3300012975|Ga0134110_10370418All Organisms → cellular organisms → Archaea631Open in IMG/M
3300014150|Ga0134081_10381320All Organisms → cellular organisms → Archaea525Open in IMG/M
3300014157|Ga0134078_10055943All Organisms → cellular organisms → Archaea1379Open in IMG/M
3300014157|Ga0134078_10558149All Organisms → cellular organisms → Archaea542Open in IMG/M
3300015054|Ga0137420_1457693All Organisms → cellular organisms → Archaea5580Open in IMG/M
3300015356|Ga0134073_10037157All Organisms → cellular organisms → Archaea1252Open in IMG/M
3300015359|Ga0134085_10106391All Organisms → cellular organisms → Archaea1168Open in IMG/M
3300017656|Ga0134112_10165180All Organisms → cellular organisms → Archaea856Open in IMG/M
3300018431|Ga0066655_10257752All Organisms → cellular organisms → Archaea1117Open in IMG/M
3300018433|Ga0066667_11751186All Organisms → cellular organisms → Archaea560Open in IMG/M
3300018468|Ga0066662_12402420All Organisms → cellular organisms → Archaea555Open in IMG/M
3300021046|Ga0215015_10274593All Organisms → cellular organisms → Archaea1304Open in IMG/M
3300024330|Ga0137417_1287770All Organisms → cellular organisms → Archaea1233Open in IMG/M
3300025164|Ga0209521_10353067All Organisms → cellular organisms → Archaea817Open in IMG/M
3300026298|Ga0209236_1190225All Organisms → cellular organisms → Archaea792Open in IMG/M
3300026309|Ga0209055_1016399All Organisms → cellular organisms → Archaea3675Open in IMG/M
3300026309|Ga0209055_1037999All Organisms → cellular organisms → Archaea2148Open in IMG/M
3300026313|Ga0209761_1074111All Organisms → cellular organisms → Archaea1792Open in IMG/M
3300026316|Ga0209155_1117241All Organisms → cellular organisms → Archaea933Open in IMG/M
3300026317|Ga0209154_1178538All Organisms → cellular organisms → Archaea850Open in IMG/M
3300026324|Ga0209470_1189408All Organisms → cellular organisms → Archaea881Open in IMG/M
3300026332|Ga0209803_1107532All Organisms → cellular organisms → Archaea1132Open in IMG/M
3300026335|Ga0209804_1043773All Organisms → cellular organisms → Archaea2214Open in IMG/M
3300026528|Ga0209378_1149410All Organisms → cellular organisms → Archaea936Open in IMG/M
3300026529|Ga0209806_1282797All Organisms → cellular organisms → Archaea557Open in IMG/M
3300026532|Ga0209160_1006096All Organisms → cellular organisms → Archaea9378Open in IMG/M
3300026538|Ga0209056_10215866All Organisms → cellular organisms → Archaea1390Open in IMG/M
3300026547|Ga0209156_10064838All Organisms → cellular organisms → Archaea1889Open in IMG/M
3300026548|Ga0209161_10231131All Organisms → cellular organisms → Archaea988Open in IMG/M
3300026552|Ga0209577_10015910All Organisms → cellular organisms → Archaea6733Open in IMG/M
3300027643|Ga0209076_1057139All Organisms → cellular organisms → Archaea1107Open in IMG/M
3300027655|Ga0209388_1198738All Organisms → cellular organisms → Archaea556Open in IMG/M
3300027748|Ga0209689_1106565All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1434Open in IMG/M
3300027748|Ga0209689_1191561All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon909Open in IMG/M
3300027846|Ga0209180_10211824All Organisms → cellular organisms → Archaea1117Open in IMG/M
3300027862|Ga0209701_10017648All Organisms → cellular organisms → Archaea4659Open in IMG/M
3300028536|Ga0137415_10007493All Organisms → cellular organisms → Archaea10812Open in IMG/M
3300028536|Ga0137415_11126806All Organisms → cellular organisms → Archaea598Open in IMG/M
3300028536|Ga0137415_11379738All Organisms → cellular organisms → Archaea525Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil35.29%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil29.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil15.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil12.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.98%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010117Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025164Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1003231413300002558Grasslands SoilKEGLTFETEKGHIVKIFLDKNTKERAEQVRGIIRENFGYVEPL*
JGI25385J37094_1019533223300002558Grasslands SoilNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
JGI25388J43891_103383823300002909Grasslands SoilFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
JGI25390J43892_1001727333300002911Grasslands SoilAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
JGI25386J43895_1013684913300002912Grasslands SoilRAVVIATFGNHFTLNDALEKFRKEGLTFETEXGXXVKXXLDKNTKERAEQVRXIXXENFGYVEPL*
Ga0066672_1013110833300005167SoilATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0066672_1060137713300005167SoilKKKSQAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRTIIRENFGYVEPL*
Ga0066677_1004202043300005171SoilNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRTIIRENFGYVEPL*
Ga0066680_1025646513300005174SoilNRAVVIATFGNHFSMNDALERFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL*
Ga0066679_1063887713300005176SoilIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066685_1007805513300005180SoilHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066678_10002250103300005181SoilVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIYLDKNTEERAEMVRKIIREGFGYVEPL*
Ga0066676_1057790723300005186SoilMNDAIEKFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL*
Ga0070708_10007976213300005445Corn, Switchgrass And Miscanthus RhizosphereGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0070708_10093315813300005445Corn, Switchgrass And Miscanthus RhizosphereKEGLTFETEKGHIVKIFLDKNTKARAEQVRSIIRENFGYVEPL*
Ga0066686_1076922913300005446SoilFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066689_1028204513300005447SoilVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066682_1068897013300005450SoilRAVIVATFGNHFTLNDAVEKFRKEGLRFETEKGHIVKIFLDKNTEERAEKVRKIIREGFGYVEPL*
Ga0066697_1011469033300005540SoilRAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066697_1062906513300005540SoilATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEKVRKIIREGFGYVEPL
Ga0066661_1082152523300005554SoilLEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066704_1012487913300005557SoilAIIVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDTNTEERAEQVRKIIREGFGYVEPL*
Ga0066703_1075169923300005568SoilLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066694_1027942023300005574SoilQAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066691_1058776423300005586SoilKKKSRAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066656_1004447913300006034SoilKKKSKAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0066656_1030142933300006034SoilNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEMVRKIIREGFGYVEPL*
Ga0066652_10074437613300006046SoilRAVIVATFGNHFTLSDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEKVRKIIREGFGYVEPL*
Ga0066665_1108435113300006796SoilTFGNHFSMNDAIEEFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIRGHLGYVEPL*
Ga0099791_1052012213300007255Vadose Zone SoilDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQIRSIIRENFGYVEPL*
Ga0099793_1052935813300007258Vadose Zone SoilNRAVIVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIYLDKNTEERAEMVRKIIREGFGYVEPL*
Ga0099793_1066238113300007258Vadose Zone SoilSRAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0099793_1072354223300007258Vadose Zone SoilTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEAVRKIIREGFGYVEPL*
Ga0066710_10018974813300009012Grasslands SoilFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0066710_10116911113300009012Grasslands SoilHFSMNDAIEEFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIRGHLGYVEPL
Ga0099829_1091398223300009038Vadose Zone SoilFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEQVRKIIREGFGYVEPL*
Ga0099829_1126753323300009038Vadose Zone SoilGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEQVRKIIREGFGYVEPL*
Ga0099830_1017021033300009088Vadose Zone SoilNRAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0099827_1164321213300009090Vadose Zone SoilLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEQVRKIIREGFGYVEPL*
Ga0066709_10137021613300009137Grasslands SoilYSQDIVIATVGNHFTLNDALEKLRKEGLTFETEKGHIVKIYLNKNTKERAEQIRSIIRENFGYVEPL*
Ga0127449_105710913300010117Grasslands SoilVVIATFGNHFSMNDAIEKFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL*
Ga0134082_1005740113300010303Grasslands SoilQAVVIATFGTHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0134082_1048997613300010303Grasslands SoilNKAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0134111_1051916323300010329Grasslands SoilIATFGNHFSMNDAIEKFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL*
Ga0134063_1006642733300010335Grasslands SoilHFSMNDAIEEFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL*
Ga0134063_1053235913300010335Grasslands SoilGNHFSMNDAIEEFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIRGHLGYVEPL*
Ga0134063_1078023613300010335Grasslands SoilNRAVVIATFGNHFSMNDAIERFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL*
Ga0126379_1348123613300010366Tropical Forest SoilKGKEAVVIATFGNHFTLNTALKLFEKEELRTETEKGHIVRIFLDKNTEERAEQVRKIVRENFGYVEPP*
Ga0137391_1026493933300011270Vadose Zone SoilGKRKKSQAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVMIFLDKNTKERAEQIRSIIRENFGYVEPL*
Ga0137388_1048337513300012189Vadose Zone SoilNRAVIVATFGNHFTLNDALEKFRNEGLRFETEKGHIVKIFLDKNTEERAEQVRKIIREGFGYVEPL*
Ga0137364_1117617213300012198Vadose Zone SoilRKEGLTFETEKGHIVKIFLDKNTKERAEQVRGIIRENFGYVEPL*
Ga0137380_1020811643300012206Vadose Zone SoilALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEQVRKIIREGFGYVEPL*
Ga0137380_1125361213300012206Vadose Zone SoilNHFTLNDALEKFRKEGLRFETEKGHIVKIYLDKNTEKRAEMVRKIIREGFGYVEPL*
Ga0137381_1019129043300012207Vadose Zone SoilVIVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEMVRKIIREGFGYVEPL*
Ga0137381_1076979113300012207Vadose Zone SoilQAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQIRSIIRENLGYVEPL*
Ga0137378_1081790923300012210Vadose Zone SoilEKFRKEGLRFETEKGHIVKIFLDKNTEERAEMVRKIIREGFGYVEPL*
Ga0137377_1104502823300012211Vadose Zone SoilFTLNDALEKFRKEGLTFETERGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0137387_1069818213300012349Vadose Zone SoilDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEMVRKIIREGFGYVEPL*
Ga0134044_121623213300012395Grasslands SoilRAVVIATFGNHFSMNDAIEKFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL*
Ga0134056_114482323300012397Grasslands SoilNDAIEKFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL*
Ga0137396_10001592113300012918Vadose Zone SoilNDALEKFRKEGLKVETEKGHIVKIFLDKNTKERAEQIRSIIRENFGYVEPL*
Ga0137419_1067593713300012925Vadose Zone SoilATFGNHFTLNDALEKFRKEGLKVETEKGHIVKIFLDKNTKERAEQIRSIIRENFGYVEPL
Ga0137410_1018878113300012944Vadose Zone SoilRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL*
Ga0134110_1037041823300012975Grasslands SoilAVIVATFGNHFTLNDALEKFRNEGLRFETEKGHIVKIFLDKNTEERAEKVRKIIREGFGYVEPL*
Ga0134081_1038132013300014150Grasslands SoilKKNRAVIIATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEKVRKIIREGFGYVEPL*
Ga0134078_1005594313300014157Grasslands SoilHFSMNDAIEKFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL*
Ga0134078_1055814923300014157Grasslands SoilNHFSMNDAIEEFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIRGHLGYVEPL*
Ga0137420_145769343300015054Vadose Zone SoilVVIATFGNHFTLNDALEKFRKEGLKVETEKGHIVKIFLDKNTKERAEQIRSIIRENFGYVEPL*
Ga0134073_1003715733300015356Grasslands SoilKNRAVVIATFGNHFSMNDAIERFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYAEPL*
Ga0134085_1010639133300015359Grasslands SoilFGNHFTLNDALERFRKEGLRFETEKGHIVKIFLDKNTEERAEKVRKIIREGFGYVEPL*
Ga0134112_1016518013300017656Grasslands SoilIEKFRKEGLQFETEKGHIVKIFLDKNTKERAEQVRSIIREHLGYVEPL
Ga0066655_1025775213300018431Grasslands SoilKSKALVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDRNTKERAEQVRSIIRENFGYVEPL
Ga0066667_1175118613300018433Grasslands SoilAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0066662_1240242023300018468Grasslands SoilGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0215015_1027459333300021046SoilLNDALEKFRKEGLRFETEKGHNVKIFLDKNTKERAEQVRKIIREGFGYVEPL
Ga0137417_128777033300024330Vadose Zone SoilRAVIVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIYLDKNTEERAEMVRKIIREGFGYVEPL
Ga0209521_1035306723300025164SoilGKKRAVIIATFGNHFTMNEALEEFRQEGLKFETEKGHIVTILLDRNTTERAEKVRKIIRDHFGYVEPL
Ga0209236_119022523300026298Grasslands SoilGKKKSKAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0209055_101639913300026309SoilTFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPP
Ga0209055_103799913300026309SoilTFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0209761_107411133300026313Grasslands SoilKKKNRAVIVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEMVRKIIREGFGYVEPL
Ga0209155_111724133300026316SoilVEKFRKEGLRFETEKGHIVKIFLDKNTEERAEKVRKIIREGFGYVEPL
Ga0209154_117853823300026317SoilFLPEFFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRTIIRENFGYVEPL
Ga0209470_118940813300026324SoilIEKFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL
Ga0209803_110753213300026332SoilAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRTIIRENFGYVEPL
Ga0209804_104377333300026335SoilATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPP
Ga0209378_114941023300026528SoilVVIATFGNHFSMNDAIEKFRKEGLQFETEKGHIVKIYLDKNTKERAEQVRSIIREHLGYVEPL
Ga0209806_128279723300026529SoilTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0209160_100609613300026532SoilIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEP
Ga0209056_1021586633300026538SoilHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0209156_1006483813300026547SoilALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0209161_1023113113300026548SoilQAVVIATFGNHFTLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRTIIRENFGYVEPL
Ga0209577_10015910113300026552SoilNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRTIIRENFGYVEPL
Ga0209076_105713933300027643Vadose Zone SoilTLNDALEKFRKEGLRFETEKGHIVKIYLDKNTEERAEMVRKIIREGFGYVEPL
Ga0209388_119873813300027655Vadose Zone SoilLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAERVRSIIRENFGYVEPL
Ga0209689_110656543300027748SoilKKKNKAIIVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDTNTEERAEQVRKIIREGFGYVEPL
Ga0209689_119156123300027748SoilQKNKAIIVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEQVRKIIREGFGYVEPL
Ga0209180_1021182413300027846Vadose Zone SoilFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEQVRKIIREGFGYVEPL
Ga0209701_1001764813300027862Vadose Zone SoilLNDALEKFRKEGLTFETEKGHIVKIFLDKNTKERAEQVRSIIRENFGYVEPL
Ga0137415_10007493103300028536Vadose Zone SoilNRAVIVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIYLDKNTEERAEMVRKIIREGFGYVEPL
Ga0137415_1112680623300028536Vadose Zone SoilGKKKNRAVVVATFGNHFTLNDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEQVRKIIREGFGYVEPL
Ga0137415_1137973813300028536Vadose Zone SoilDALEKFRKEGLRFETEKGHIVKIFLDKNTEERAEQVRKIIREGFGYVEPL


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