Metagenome Family F100914

Basic Information
Family ID	F100914
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	120 residues
Representative Sequence	MQIWFQFDVRTVALFVAMAFFVQATAIGAQAFLIRELKQYRGVGAALFANLCVAVGLMLRLFANGLPDFLTIILSNVLLLTGSGLFYIALSQFTGLLYSKAFVIGIIATAISFLSYF
Number of Associated Samples	88
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil (9.804 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.235 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.14% β-sheet: 0.00% Coil/Unstructured: 35.86%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
f.13.1.2: Rhodopsin-like	d5dysa_	5dys	0.72116
f.13.1.0: automated matches	d3ddla_	3ddl	0.71712
f.13.1.1: Bacteriorhodopsin-like	d6s6ca_	6s6c	0.71159
f.13.1.0: automated matches	d6xl3a_	6xl3	0.70613
a.24.3.1: Cytochrome b562	d4l6ra2	4l6r	0.70497

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00487	FA_desaturase	1.96
PF00012	HSP70	1.96
PF01048	PNP_UDP_1	1.96
PF00106	adh_short	0.98
PF04365	BrnT_toxin	0.98
PF06831	H2TH	0.98
PF01797	Y1_Tnp	0.98
PF00990	GGDEF	0.98
PF13358	DDE_3	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	1.96
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	1.96
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	1.96
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	1.96
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	1.96
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.98
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.98
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.49%
Host-Associated	Host-Associated	24.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.94%
Plants	Host-Associated → Plants	24.51%
Aquatic	Environmental → Aquatic	22.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.80%
Freshwater	Environmental → Aquatic → Freshwater	7.84%
Sediment	Environmental → Aquatic → Sediment	7.84%
Marine	Environmental → Aquatic → Marine	6.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.84%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.94%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.96%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	9.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.94%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.96%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.96%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003989	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordA_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300025817	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027955	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_21294281	3300000033	Soil	MYDMIHNQRIGMNILFQFDIRTIAIFVGMTFLVQATVIGAQAYLIRDLKQYRGVGAALLANLLMAVGLLLRLFADYLPGFMTIIVSNTVLLAAPGIFYVALSQFLGFSYNKTFVIGVITTSLLFLLYFTYAKDDIGSRAISLSLGAVALVSILIHQL
ICChiseqgaiiFebDRAFT_141066391	3300000363	Soil	MNILFQFDIRTIAIFVGMTFLVQATVIGAQAYLIRDLKQYRGVGAALLANLLMAVGLLLRLFADYLPGFMTIIVSNTVLLAAPGIFYVALSQFLGFSYNKTFVIGVITTSLLFLLYFTYAKDDIGS
ICChiseqgaiiFebDRAFT_141934111	3300000363	Soil	MCGNPPLFSQLQLRYYCVDKGLVWMNIVFQFDVRTVALFVGMTFFVQAAAIGAQALLIRELKQYRGVYAALLANLCVAVCLMLRLFADQLPDFLIFVVANTLLLTGLALYYVALSQFTGFSYSKTLLVAII
JGI11643J11755_112373831	3300000787	Soil	MHILFQFDVRTVALFVAMTFFVQATAIGAQAFLIRELKQYRGVGAALLANLCVAVGLILRLFADXLPXFLTTXLSNLLLLSGSALFYIALSQFSGFPYSKTYVIGVLTAALLFLSYF
JGI11643J11755_117222421	3300000787	Soil	MEKERFRIQILLQFDVRTIALFVAMTFFAQAIAIGAQAFLIRELKQYRGVGAALLANLCVAVGLMLRLFAEQLPDFLTIILSNTLVLTGTGLFYISLSQLTGFSYSKVFVIGVIVIVLSFLLYFTYWVDDMG
JGI10220J13317_128014532	3300001139	Soil	MEKERFRIQILLQFDVRTIALFVAMTFFAQAIAIGAQAFLIRELKQYRGVGAALLANLCVAVGLMLRLFAEQLPDFLTIILSNTLVLTGTGLFYIALSQLTGFSYSKMFVIGVIA
JGIcombinedJ13530_1093411691	3300001213	Wetland	MNIQFQFDVRTIALFVALTFFVQATAIGAQAFLIRELKQYRGIGAAMMANLFAAAALILRLIANRVSEDQAILILSNALLLMAPGVFYIALGQFTGFSYSRAYVIGVTAVVVSFL
JGI24809J26612_10443901	3300002100	Soil	MQILFQVDVRTLALFVAMTFFVQATAIGAQALLIRELRQYQGVGAALMANLCVAVGLLLRLFIGRLPDFVSTILSSALILTGPGLFYIALGQFTGQTYSKGTV
JGI20214J51650_100327623	3300003541	Wetland	MQIIFQFDIRTIAVFIALTFFVQATAIGAQALLIRELKQYRGVQAALLANLCAAAALTLRLFASRLPEAPAILLSNALLLAGPGLFYIALGQFTGFPTAKNMSLR*
Ga0055471_101920991	3300003987	Natural And Restored Wetlands	MQILFQFDVRTVALFVAMTFFVQAAAIGAQAFLIRELKQYRGVGAALMANLCVAVGLMLRLFAERLPDFLITILSNVVLVAGPGLFYIALSQFTGFRYSK
Ga0055473_102485711	3300003989	Natural And Restored Wetlands	MQILFQFDVRTIALFIGMTFFVQASVIGAQAFLIRELKQYRGVGAAVLANLCVASGVMLRLYTDRLPGFFTLILSNILLLIAIGIFYVALSQFTGLTYSKALVIGVIVVVLCFLT
Ga0055468_102154071	3300003993	Natural And Restored Wetlands	MPILFQFDVRTVALFVAMAFFVQATAIGAQAFLIRELKQYRGVRAALLANLCAAVGLILRLFAEQLPGFFTTILSNTLLLTGSALFYIALSQFTGFPYNKALVIGIIAVVVLFLLYFTYREDDIGKRIITLSLGSVTMVCLLIDQLW
Ga0055467_100651362	3300003996	Natural And Restored Wetlands	MQVLFQFDVRTVALFVATTFFVQATAIGAQAFLIKDLKQYRGVGAALLANLCVAVGLMLRLFADQLPGFVTTILSNTLLLTGSGLFYIALSQFTGFIYSKLAVLGVIVATASFLTYFTYSDDDIEKRVITLSLGSITMVFLLIDQIWRT
Ga0062590_1016638282	3300004157	Soil	MNILFQFDVPTVALFVALTFFVQATAIGAQALLIRELKQYRGVRAALLANLCAAAALMLRLFANRLPENPTIILSNTLLLLAPGFFYIALGQFTGFRYSKTYVIGIIVVVAAFLVYYTYWNDDIAMRIIVVSLGSIVLVFLMI
Ga0062590_1017746612	3300004157	Soil	MQIFFQFDVRTVALFVGMTFFVQAAAIGAQAYLIRELKQYRGVGAALVANLCVAVGLMLRLFADRLPEFFITVLSNTLLLTGSGLFYIALSQFMAFPYSKS
Ga0063356_1056476371	3300004463	Arabidopsis Thaliana Rhizosphere	MQILFQFDVRTVAVFVALTFFIQAMAIGAQAFLIRELKQYRGVEAALLANLCVAVGLLLRMFAALLPEFLTTIVSNILLLVGPALFYVALSQFTGFRYSRMLL
Ga0062592_1004790112	3300004480	Soil	MPIVFSFDLRIIAFFVALAFLVQGTVIGAQAYLIRDLRQYHGVGMALAANLCVAVGLMLRLFMNQLPGFFTTILSTILLLTGSGLFYVALSQFTGFTYSKSLVIGILAVTLSFLVYFTYW
Ga0065704_105570592	3300005289	Switchgrass Rhizosphere	MEKERFRIQILLQFDVRTIALFVAMTFFAQAIAIGAQAFLIRELKQYRGVGAALLANLCVAVGLMLRLFAEQLPDFLTIILSNTLVLTGTGLFYIALSQFTGFSYSKAFVIGVIAIVLSFLLYFTYWVDDM
Ga0065704_106056681	3300005289	Switchgrass Rhizosphere	MQVLFQFDVRVIALFVGMTFFVQATAIGAQAFLIRDLKQYRGVGAAMLANLCVAVGLMLRLFGDQLPIFLTTVVSNTLILMGSGLFYIALSQFAGFTYSKISFLGVIVTVASFLWYFTYWNDDIEKRMITLSLGSITMVFLLI
Ga0065705_101225771	3300005294	Switchgrass Rhizosphere	MQVVFQFDIRAVALFVATTFFVQATAIGAQAFLIRDLKQYRGVGAALLANLSVAVGLMLRLFAEQLPAFVTTVLSNTLILTGSGLFYIALSQFTGFAYSKLTVLGVIVTVASFLTYFTFWDEDIEKRMITLSLGSIT
Ga0065705_103347831	3300005294	Switchgrass Rhizosphere	MPINFQFDVRTVALFVAMTFLVQATVIGAQAFLIRDLKQYRGVGAALMANLCVAVGVMLRLFTDQLPEFFTTVLSNASILTGLGLFYIALSQFTGFAYSMAFVIGVIATVLSFLLYFTYWDDDIG
Ga0065707_108058211	3300005295	Switchgrass Rhizosphere	MPINFQFDVRTVALFVAMTFLVQATVIGAQAFLIRDLKQYRGVGAALMANLCVAVGVMLRLFTDQLPEFFTTVLSNASILTGLGLFYIALSQFTGFAYSIAFVIGVIATVLSFLLYFTYWDDDIGKRV
Ga0070670_1021247471	3300005331	Switchgrass Rhizosphere	MQVVFQFDIRAVALFVATTFFVQATAIGAQAFLIRDLKQYRGVGAALLANLSVAVGLMLRLFAEQLPAFVTTVLSNTLILTGSGLFYIALSQFTGFAYSKLTVLGVIVTVASFLTYFTFWDEDIEKRMITLSL
Ga0070689_1014108672	3300005340	Switchgrass Rhizosphere	MQIVFQFDIRTVALFVGMAFLVQASAIGAQAFMIRELKQYRGVSAAMLANLCVAVGLMLRLFMEHLPIFLTTIISNTLLLTGLGLFYVALSQFTGFTYSKALVIGIIATVAALLWYFTFWQENIEGRMLSLSLGSI
Ga0070689_1016958921	3300005340	Switchgrass Rhizosphere	MQVIFQFDIRTIALFVGMTFFVQAAAIGAQAFLIRELKQYRGVLAALLANLFVAVGLMLRLFGDRLPEFVTTVLSNTLLLMGPALFYIALSQLTGLTYSRVF
Ga0070687_1001745861	3300005343	Switchgrass Rhizosphere	MQIVFQFDIRTVALFVGMAFLVQASAIGAQAFMIRELKQYRGVSAAMLANLCVAVGLMLRLFMEHLPIFLTTIISNTLLLTGLGLFYVALSQFTGFTYSKALVIGIIATVAALLWYFTFWQENIEGRMLSLSLGSISLTLLLILQLR
Ga0070705_1014978351	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEKERFRIQILLQFDVRTIALFVAMTFFAQAIAIGAQAFLIRELKQYRGVGAALLANLCVAVGLMLRLFAEQLPDFLTIILSNTLVLTGTGLFYIALSQLTGFSY
Ga0070695_1016524281	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSIVFSFDVRTIAFFVALTFFVQGAVIGAQAFLIRDLRQYQGVGTALIANLCVAVGLMLRLFMDRLPDFFTTILSNILLLTGSGFFYIALSQFTEQAYSKSLVTGVIAVVLSLLV
Ga0070704_1022491031	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MQIIFQFDVRTIALFVGMTFFVQATAIGAQAFLIRELKQYRGVLAALLANLFVAVGLMLRLFADRLPEFFTTVLSNTLLLMGPGLFYIALSQLTGLTYSKVFVIGVITMVGSFLAYFTFWVDH
Ga0070664_1018084741	3300005564	Corn Rhizosphere	MQVVFQFDIRAVALFVATTFFVQATAIGAQAFLIRDLKQYRGVGAALLANLSVAVGLMLRLFAEQLPAFVTTVLSNTLILTGSGLFYIALSQFTGFAYSKLTVLGVIVTVASFLTYFTFW
Ga0068857_1016021172	3300005577	Corn Rhizosphere	MQVVFQFDIRAVALFVATTFFVQATAIGAQAFLIRDLKQYRGVGAALLANLSVAVGLMLRLFAEQLPAFVTTVLSNTLILTGSGLFYIALSQFTGFAYSKLTVLGVIVTVASFLTYFTFWDEDIEK
Ga0068864_1004323212	3300005618	Switchgrass Rhizosphere	MQVVFQFDIRAVALFVATTFFVQATAIGAQAFLIRDLKQYRGVGAALLANLSVAVGLMLRLFAEQLPAFVTTVLSNTLILTGSGLFYIALSQFTGFAYSKLTVLGVIVTVASFLTYFTFWDED
Ga0075288_10829491	3300005874	Rice Paddy Soil	MYRQRSSVQILFEFDVRTVALFVGMTFFVQATAIGAQAFLIRELKQYRGVSAALLANLCVAVGLMLRLFADRLPLFLITVLPNILLLTGPALFYIALSQFTDLT
Ga0075290_10685831	3300005889	Rice Paddy Soil	VQILFEFDVRTVALFVGMTFFVQATAIGAQAFLIRELKQYRGVSAALLANLCVAVGLMLRLFADRLPLFLITVLPNILLLTGPALFYIALSQFTDLTYSRTFVIGIIATVLSLLLYFTYWEDDIGKRVIA
Ga0081539_100084011	3300005985	Tabebuia Heterophylla Rhizosphere	MHIFFQFDLQTIALFVAMAFFVEATAIGAQAYLIRDLRQYRGVRAALMANLCVAIGLMLRLFANQLPDVLAVILSNTSILTGLGLFYIALSQFTGFRYSNTYVIAVIATVLSFLLYFTYWDDNTRKRVITLSLGS
Ga0079222_106908431	3300006755	Agricultural Soil	MQISFQFDIRTIALFVGMTFFIQATAIGAQAFLIRELKQYRGVGAAVLANLCAAVGLMLRLFAEHLPIFLTTVLSNTLLLTASCLFYIALSQFTGFLYRRTFVIGIIGTVAAL
Ga0079222_112534711	3300006755	Agricultural Soil	MQILFQFDIRTVALFVGMAFLVQASAIGAQAFMIRELKQYRGVEAAMLANLCVAVGLILRLFVEHLPIFLTTIVSNTLLLTGLSLFYVALSQFTGFTYRKGLVFGIIATVAALLW
Ga0079220_114406101	3300006806	Agricultural Soil	MQIIFQFDVRTIALFVGMTFFVQATAIGAQAFMIRELKQYRGVGAALLANLSVAVGLMLRLFMDHLPAFMTTVLSNSLLLTGSGLFYIALSQFTGFAYSKLAIFGVIMTVAAFLTYFTYWDNDIEKRMISLSLGSI
Ga0075421_1007177553	3300006845	Populus Rhizosphere	MEIQFQFDVRTVALFVALTFFVQAMAIGAQAFLIRELKQYQGVGAALLANLCVTVGLILRMFAALLPEFLTIILSNILLLVGPALFYIALSQFTGLRYNRTLIIGVITTVLVFLAYFTYWDDDIRR
Ga0075430_1007231541	3300006846	Populus Rhizosphere	MPINFQFDVRTVALFVAMTFLVQATVIGAQAFLIRDLKQYRGVGAALMANLCVAVGVMLRLFTDQLPEFFTTVLSNASILTGLGLFYIALSQFTGFAYSMAFVIGVIATVLSFLLYFTYWDDDIGKRVIALS
Ga0075433_103530482	3300006852	Populus Rhizosphere	MQIFFEFDVRTVALFVGMTFFVQAAAIGAQAFLIRELKQYQGVSAALLANLCVAVGLMLRLFADRLPVFLITVLSNLLLLAGPALFYIALSQFTGLTYSRT
Ga0079215_109566941	3300006894	Agricultural Soil	MPIVFSFDVRTLALFVAMTFFIQGTVIGAQALLIRDLKQYRGVNAALIANLCVAAGLMLRLFVDRLPDFVTTILSNILLLTGSGLFYIALSQFTGFRYSKSLVVGVIAVALAFLVYFTYWDNDLGMRMIAFSLGSVAMVFILIVQLWR
Ga0079219_100782351	3300006954	Agricultural Soil	MQIIFQFDVRTIALFVGMTFFVQATAIGAQAFMIRELKQYRGVGAALLANLSVAVGLMLRLFADHLPIFLTTVLSNTLVLTGLGLFCIALSQFTGFAYSKMFVMGVIAIVASF
Ga0079219_103917083	3300006954	Agricultural Soil	MQILFQFDIRTVALFVGMAFLVQASAIGAQAFMIRELKQYRGVGAAMLANLCVAAGLMLRLFAEHLPAFLTTILSNTLVLTGLSLFYIALSQFTGFTYNKGLVIGIIAT
Ga0075419_101474563	3300006969	Populus Rhizosphere	MPINFQFDVRTVALFVAMTFLVQATVIGAQAFLIRDLKQYRGVGAALMANLCVAVGVMLRLFTDQLPEFFTTVLSNASILTGLGLFYIALSQFTGFAYSMAFVIGVIATVLSFLLYFTYWDDDIGKRVIALSLGSIAMVFILIGQLWR
Ga0079218_124094281	3300007004	Agricultural Soil	MPIVFSFDVRTIALFVAMTFFVQGTVIGAQAFLIRDLRQYRGVRAALIANLCVAVGLMLRLFMNGLPDFFTTILSNILLLTGSGLFYIALSQFTGFTYRKSLVIGVIAVALAFLVYFTYWDDDLGMRMITFSLGSV
Ga0079218_130089061	3300007004	Agricultural Soil	MPISFSFDVRTIALFVAMTFFIQSAVIGAQAFLIRDLRQYHGVGTALVANLCVAVGLMLRLFMDGLPDFVTIILSNTLLLTGSGLFYIALSQFTGLTYSKALVIGVIAVALSFLVYFTYWDDDLGMRMITFSLGSVAMV
Ga0105098_105111161	3300009081	Freshwater Sediment	MHIIFQFDVRTVALFVTMMFFVQATAIGAQAFLIRELKQYRGVGAALMANLCVAAALMMRLFAQQLPDFVIVILSNTLLLSGSGLFYVALSQFTGFPYSKTF
Ga0105091_100643361	3300009146	Freshwater Sediment	MQIRFEFDIRTIALFVGLTFFVQASVIGAQAYLIRELKQYRGIGAALLANLCAAIGIMLRLFADQLPGFLTIILSNILLLTASSLFYIALSQFAGFTYSKAFVIGVIAT
Ga0105091_104529671	3300009146	Freshwater Sediment	MQILFQFDVRTVALFVAMAFFVQATAIGAQAFLIRDLRQYHGVGAALVANLCVAVGLMLRLFADRLPDFFITIVSNILLLMGSGLFYVALSQFTGFSYS
Ga0114129_131116811	3300009147	Populus Rhizosphere	MQISFQFDVRTIALFVGMTFFVQATAIGAQAFLIRELKQYRGVGAALLANLCVAVGLMLRLFADRLPEFFSVILSNTLVLTGPGLFYIALSQFTGLTYSKTFLIGVIALVVSFLVYFTYWEDHIANRIITLSFGSI
Ga0105104_106286191	3300009168	Freshwater Sediment	MLFDVRTIAILVAVAFFIQGVAMGAQALLIWDLRQYRGVGAALMANLCVAVGFLLRLFVEQLPPFFSTILASTLILAGPALYYVAIGQFTGQEYSKSAVIGVITFVLLFLMYFTYVNDSSNMRVLAHSLGVVAILCYVVY*
Ga0105104_108980481	3300009168	Freshwater Sediment	MQISFEFDIRTIALFVGLTFFVQASVIGAQAYLIRELKQYRGVGAAMLANLCAAVGIMLRLFADWLPDFLTIILSNILLLTATGLFYIALSQFAGFPYNKPF
Ga0105241_108142471	3300009174	Corn Rhizosphere	MQVVFQFDIRAVALFVATTFFVQATAIGAQAFLIRDLKQYRGVGTALLANLCVAVGLMLRLFGDYLPTFVTTVLSNSLLLTGSGLFYIALSQFTGFTYSRSLVIGILAIAFSLLVYFTYW
Ga0126307_104713382	3300009789	Serpentine Soil	MQILFQFDVRTVAVFVALTFFIQAMAIGAQAFLIRELKQYRGVGAALLANLCVAVGLLLRMFAALLPEFLTTILSNILLLVGPALFYVALSQFTGFRYSRMLLIGV
Ga0126313_117978921	3300009840	Serpentine Soil	MQIRFDFDVRTVALFVGMTFLVQATAIGAQAYLIRELKQYRGVSAALLANLCVAAGLMLRLFADRLPVFVITVLANVLLLTGPALFYIALSQFTGLSYSRTFVICVIAT
Ga0126315_103768712	3300010038	Serpentine Soil	MQIRFDFDVRTVALFVGMTFLVQATAIGAQAYLIRELKQYRGVSAALLANLCVAAGLMLRLFADRLPVFVITVLANVLLLTGPALFYIALSQF
Ga0126315_104752141	3300010038	Serpentine Soil	MEINFQVDLRVVALFVAVTFLVQSIAIGAQAFLIRDLKQYHGVGAALVANLCVAAGLILRLFVEQQPGFLFTILSNALLLMGFCLFYIALSQFTGLTYSKLLVVGVVAVA
Ga0126312_101191481	3300010041	Serpentine Soil	MQIWFQFDVRTVALFVAMAFFVQATAIGAQAFLIRELKQYRGVGAALFANLCVAVGLMLRLFANGLPDFLTIILSNVLLLTGSGLFYIALSQFTGLLYSKAFVIGIIATAISFLSYF
Ga0126314_109920441	3300010042	Serpentine Soil	MHILFQFDVRTVALFVAMSFFVQATAIGAQAFLIRELKQYKGVEAALLAHLCVAGGLMLRLFAEQLPEFMTTVLSNLLLIAGPGFFYFALSQFTGFTYSKAFVIGILLAALF
Ga0126310_108268532	3300010044	Serpentine Soil	MQIRFDFDVRTVALFVGMTFLVQATAIGAQAYLIRELKQYRGVSAALLANLCVAAGLMLRLFANRLPVFVITVLANVLLLTGPALFYIALSQFTGLS
Ga0126311_102086334	3300010045	Serpentine Soil	MQITFEVDLRIIALFVAVTFLVQSIAIGAQAYLIRDLKQYHGVGAALVANLCVAVGLILRLFIEQLPNSLSTILSNGLILMGFCLFYIALSQFTGLTYSKLLVTGVMVVALSFLAYFTYWVDNLGMRMITLSLGSLVMVLIIV
Ga0137450_10976831	3300011407	Soil	MQILFQFDVRTVALFVALTFLVQATAMGAQAYMIRDLKQYRGIGLALTANLSVAAGIILRLFMDWLPVVLDTILASTLVLLGPGLFYVALSQFTGLSYSRIWVMGILAISQILMILFSYPAGNVRL
Ga0137443_11947721	3300011433	Soil	MQILFQFDVRTVALFVALTFLVQATAIGAQAYMIRDLKQYRGIGLALTANLSVAAGIILRLFMDWLPVVLDTILASTLVLLGPGLFYVALSQFAGLSYSRLWVISTLVLYQFL
Ga0137451_12936461	3300011438	Soil	MQIIFQFDVRTIALFVGMTFFVQATAIGAQAFLIRELKQYRGVRAALLANLCVAIGLMLRLFADQLPEFFTTVLSNTLLLMGPGLFYIALSQLTGLTYSKAFVIGVITAVVSFLSYFTFWVDH
Ga0137463_13461011	3300011444	Soil	MQIIFQFDVRTIALFVGMTFFVQAAAIGAQAFLIRELKQYRGVRPALLANLFVAVGLMLRLFGDRLPEFFTTVLSNTLLLMGPGLFYIALSQLTGLTYNKVFVIGIITVVVSFLAYFTFWVDHIENRIIIV
Ga0137374_110610321	3300012204	Vadose Zone Soil	MQILFQFDVRTIALFVGMTFLFQATAIGAQAFLIRELKQYRGVGAALLANLCVAVGLMLRLFADQLPSFLTIILSNTLLLTGPGLFYIALSQFAGLTYSKTFVIGVITIVMSFLLYFTYWDDHMGNRIIILSLGSIAMVFIMIY
Ga0137367_108447621	3300012353	Vadose Zone Soil	MPILFQFDVRTVALFVAMTFFVQATAIGAQAFLIRDLRQYRGVGAALMANLCVAVGLVLRLFVDRLPDFIATILASAMILTGPGLFYVALGQFTGLTYSKAIVIAVITAVLSFLLYFTYWENNIEMRMITLSLGA
Ga0137371_107744112	3300012356	Vadose Zone Soil	MQILFLFDVRTVALFVAMTFFVQATAIGAQAFLIRDLRQYRGIGPALMANLCVAVGLMLRLFVGRMPDFFTTILADVLLLTGPGLFYVALGQFTGLIYSKAVVIGVITTVLAFLLYFTYL
Ga0157283_103327731	3300012907	Soil	MQILFQFDVRTVAIFVALTFFIQAMAIGAQAFLIRELKQYRGVEAALLANLCVAVGLLLRMFAALLPEFLTTILSNILLLVGPALFYVALSQFTGFKYSRILVVGVITIVLF
Ga0164303_112203461	3300012957	Soil	MQIVFQFDIRTVALFVGMAFLVQASAIGAQAFMIRELKQYRGVGAAMLANLCVAAGLMLRLFVEHLPIFLTTIVSNTLLLTGLSLFYIALSQFTGFTYSKA
Ga0164301_109844061	3300012960	Soil	MQIFFQFDVRAVALFIGMAFFVQAAAIGAEAYLIRELKQYQGVEAALLANLCVAVGLMLRLFSNRLPEFFIVILSNLFIIAGPALFYIALSQFAGFPYSKVLLIGVIATVLFFLS
Ga0075325_11878941	3300014270	Natural And Restored Wetlands	MQILFQFDVRTIALFIGMTFFVQASVIGVQAYLIRELKQYRGVNPALLANLCVAVGIMLRLFANQLPGFITTIFSNILLLVGSGLFYIALSQFTGFSYSRAFVIGTIATVLLLLVYFTYWQDELGKRIIVHSLGSVAIAFLLVYQLWR
Ga0075355_12500891	3300014322	Natural And Restored Wetlands	MQIIFQFDIRTIAVFIALTFFVQATAIGAQALLIRELKQYRGVQAALLANLCAAAALTLRLFASRLPEAPAILLSNALLLAGPGLFYIALGQFTGFPYSKKYVVAVI
Ga0157380_112629281	3300014326	Switchgrass Rhizosphere	MSIVFSFDVRTIAFFVALTFFVQGAVIGAQAFLIRDLRQYQGVGTALIANLCVAVGLMLRLFMDRLPDFFTTILSNILLLTGSGFFYIALSQFTEQAYSKSLVTGVIAVVLSLLVYF
Ga0180069_10342312	3300014882	Soil	MPIFSFDVRTIALFVAMTFFVQSTVIGAQAFLIRDLKQYRGVRAALIANLCVAIGLMLRLFMDRLPDFFTTILSNILLLTGSGLFYIALSQFTGFT
Ga0132256_1024827251	3300015372	Arabidopsis Rhizosphere	MQILFQFDIRTVALFVGMAFLVQASAIGAQAFMIRELKQYRGVEAAMLANLCVAVGLILRLFVEHLPIFLTTIVSNSLLLTGLGLFYIALSQFIGFTYSRSLVVGVIA
Ga0132256_1028611661	3300015372	Arabidopsis Rhizosphere	MQILFQFDVRTIALFIAMTFFVQATAIGAQAFLIRELKQYRGVRAALLANLCAATALMLRLFANRLSENPTFILSNAMLLLAPGLFYIALGQFTGFHYSKTYVIGVIAVVVAFLVYF
Ga0132255_1021025112	3300015374	Arabidopsis Rhizosphere	MQVLFQFDVRTVALFVATTFFVQATAIGAQAFLIRDLKQYRGVGAALLANLCVAVGLMLRLFEDRLPGFVTTVLSNSLLLTGSGLFYIALSQFTGFAYSKLTVLGVIVTVAACLTYFTHWDNDIEKRMITLS
Ga0184626_104180811	3300018053	Groundwater Sediment	MPIVFSFDVRTIALFVALTFFVQGTVIGAQAFLIRDLRQYRGVSAALIANLCVAVGLMLRLFMNGLPDFFTIILSNILLLTGSGLFYIALSQFTGFTYSKSLVIGIITVALSFLVYFTYWDDDMRMRM
Ga0184635_101582301	3300018072	Groundwater Sediment	MPIVFSFDVRTIALFVAMSFFVQGTVIGAQAFLIRDLRQYRGVEAALIANLCVAVGLMLRLLMGQLPDFFTTILSTILLLTGSGLFYIALSQFTGFTYSKSLVIGIIAVALSFLVYFTYWDDDLGMRIISFSLGSLAMV
Ga0184629_105224761	3300018084	Groundwater Sediment	MPIVFSFDLRIIAFFVALAFLVQGTVIGAQAYLIRDLRQYHGVVMALVANLCVAVGLMLRLFMDQLPGFFTAILSNILLLTGSALFYIALSQFTGLTYSKPLVIG
Ga0190268_123643411	3300018466	Soil	MPILFQFDVRTVALFVAMAFFVQATAIGAQAFLIRELKQYRGVRAALLANLCAAVGLILRLFAEQLPGFFTTVLSNTLLLTGSALFYIALSQFTGFPYSKALVIGIIAVVMSFLLY
Ga0190273_115683631	3300018920	Soil	MDKERFRIQILLQFDVRTVALFVALTFFAQAIAIGAQAFLIRELKQYRGVGAALLANLCVAVGLMLRLFTARLPDFLTIILSNTLVLAGTGLFYMALSQFTGFSYS
Ga0193741_10428554	3300019884	Soil	MPISFSFDVRTIAFFVALTFFVQGTVIGAQAYLIRDLRQYHGIGMALVANLCVAVGLMLRLFMDGLPDFLTTILSNILLLTGSGLFYIALSQFTGLS
Ga0210144_11343541	3300025817	Natural And Restored Wetlands	MQILFQFDVRTIALFIGMTFFVQASVIGAQAFLIRELKQYRGVGAAVLANLCVASGVMLRLYTDRLPGFFTLILSNILLLIAIGIFYVALSQFTGLTYSKALVIGVIVVVLCFLTYFTYWDDDMGKRILSQSLGSIAIV
Ga0207643_100910211	3300025908	Miscanthus Rhizosphere	MQVVFQFDIRAVALFVATTFFVQATAIGAQAFLIRDLKQYRGVGTALLANLCVAVGLMLRLFGDYLPTFVTTVLSNSLLLTGSGLFYIALSQFTEFAYSKLVIFGVVV
Ga0207660_114283021	3300025917	Corn Rhizosphere	MEKERFRIQILLQFDVRTIALFVAMTFFAQAIAIGAQAFLIRELKQYRGVGAALLANLCVAVGLMLRLFAEQLPDFLTIILSNTLVLTGTGLFYIALSQLTGF
Ga0207674_118875191	3300026116	Corn Rhizosphere	MNILFQFDVRTVALFVALTFFVQATAIGAQALLIRELKQYRGVRAALLANLCAAAALMLRLFANRLPENPAIILSNTLLLMAPGFFHIALGQFTGFHYSKTYVIGIIVVVAAFLVYFTYWNDDIAMRIIVVSL
Ga0209215_10353292	3300027266	Forest Soil	MQILFQFDVRTVALFVAMMFFVQATAIGAQAFLIRELKQYRGVGAALMANLCVAVGLMLRLFADRLPDFLITILSNILLLTGPGLFYIALSQFTGFTYSRVFVIGVIATVLSFLVYFRYWDDDIGKRVITLSLGSIAMVLILIYQLW
Ga0209485_11344452	3300027691	Agricultural Soil	MDKERLRIQILLQFDVRTVALFVAMTFFAQAIAIGAQAFLIRELKQYRGVGAALLANLCVAVGLMLRLFSDRLPDFLTIILSNTLALTGTGLFYIALSQFTGFSYSKTFVIGVIAIVL
Ga0209819_101584461	3300027722	Freshwater Sediment	VQILFLLDVRTVALFVAMTFFVQATAIGAQAFLIRELRQYRGIGAALMANLSVAVGLMLRLLVGRLPDFITTILSSALILAGPGLFYVALSQFTGLS
Ga0209074_101399381	3300027787	Agricultural Soil	MQISFQFDIRTIALFVGMTFFIQATAIGAQAFLIRELKQYRGVGAAVLANLCAAVGLMLRLFAEHLPIFLTTVLSNTLLLTASCLFYIALSQFTGFLYRRTFVIGIIGTVAA
Ga0209481_101000971	3300027880	Populus Rhizosphere	MDIRFQFDVRTVALFVAMAFFVQATAIGAQAFLIRELKQYRGVRAALTANLCVAVGLMLRLFADRLPEFLTVVLSNVLLLTGLGLFYIALSQFTGLSYSKVIVIGVITAVVSLLLYFTYW
Ga0209481_101575911	3300027880	Populus Rhizosphere	MPIYFQFDVRTVALFVAMTFLVQATVIGAQAFLIRDLKQYRGVGAALMANLCVAVGVMLRLFTDQLPEFFTTVLSNASILTGLGLFYIALSQFTGFAYSMAFVIGVIATVLSFL
Ga0209496_107757571	3300027890	Wetland	MMCRQSLTMQIVFQIDIRTIAVFVALTFFVQATAIGAQALLIRELKQYRGVLAALLANLCAAASLLLRLFASRLPEYPTILLSNILLLAGPGLFYIAMGQFTGFPY
Ga0209382_107210252	3300027909	Populus Rhizosphere	MEIQFQFDVRTVALFVALTFFVQAMAIGAQAFLIRELKQYQGVGAALLANLCVTVGLILRMFAALLPEFLTIILSNILLLVGPALFYIALSQFTGLRYNRTLIIGVITTVLVFLAYFTYWDDDIRRR
Ga0209078_12201251	3300027955	Freshwater Sediment	MHILFQFDVRTVALFVAMAFFVQATAIGAQAFLIRELKQYRGVAAALMANLCVAVGLMLRLFADLLPDFLTIILSNILLLTGLGLFYVALSQFTGFPYSK
Ga0268265_126498842	3300028380	Switchgrass Rhizosphere	MDTGPVQILFQFDVRTIAFFVGMTFIVQATVIGAQAFLIREFKQYRGVGAALLANLFAALGLMLRLFADRLPAFVAIIISNTLLLSASGLFYIALSQFTGFTYSRAYVIAVIGIVLSSLMYFTYWDDDIGNRIISLSLG
Ga0307416_1037904231	3300032002	Rhizosphere	MDKERFRVQILLQFDVPTVALFVALTFFAQAIAIGAQAFLIRELKQYHGVGMALLANLCVAVGLMLRLFAEWLPDFLTIILSNTLVLAGIGLFYIALSQFT
Ga0214471_112788561	3300033417	Soil	MQILFQFDVRTIALFVGMTFFVQASVIGAQAYLIRELKQYRGVGAALLANLCVAVGIMLRLFEDRLPVFLAIILSNTLLLAGTGLFYIALSQFTGFTYSKAFVIGVIATVLSFLVYFTYWQDDIGRRIIAHS
Ga0316627_1026466271	3300033482	Soil	MMCRQSSKMQIVFQFDIRTIAVFVALTFFVQATAIGAQALLIRELKQYRGVPAALLANLCAAASLMLRMIANRLPDNLFLLLLSNALLLAGPGLFYIALGQFTGFHYSRTYVIGVIVMIMSLLAYFLYIQDDLAMRMILLSLG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100914

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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