Metagenome Family F101012

Basic Information
Family ID	F101012
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	60 residues
Representative Sequence	WINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH
Number of Associated Samples	72
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.69 %
% of genes near scaffold ends (potentially truncated)	56.86 %
% of genes from short scaffolds (< 2000 bps)	50.98 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Unclassified (95.098 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (79.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (52.941 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.07% β-sheet: 0.00% Coil/Unstructured: 37.93%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF05368	NmrA	2.94
PF00072	Response_reg	1.96
PF00196	GerE	1.96
PF14743	DNA_ligase_OB_2	1.96
PF03544	TonB_C	1.96
PF00574	CLP_protease	1.96
PF00069	Pkinase	1.96
PF01797	Y1_Tnp	0.98
PF14534	DUF4440	0.98
PF04932	Wzy_C	0.98
PF01381	HTH_3	0.98
PF13565	HTH_32	0.98
PF01609	DDE_Tnp_1	0.98
PF01244	Peptidase_M19	0.98
PF02371	Transposase_20	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.84
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.92
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	3.92
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.96
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.98
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.98
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.98
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.98
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.98
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.98
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.98
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
All Organisms	root	All Organisms	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
cellular organisms	root	All Organisms → cellular organisms	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.90 %

Scaffold	Taxonomy	Length	IMG/M Link
3300009521\|Ga0116222_1455310	Not Available	558	Open in IMG/M
3300009548\|Ga0116107_1202319	Not Available	521	Open in IMG/M
3300009617\|Ga0116123_1107981	Not Available	736	Open in IMG/M
3300009618\|Ga0116127_1029826	Not Available	1683	Open in IMG/M
3300009636\|Ga0116112_1121888	Not Available	730	Open in IMG/M
3300009636\|Ga0116112_1175316	Not Available	596	Open in IMG/M
3300009764\|Ga0116134_1143788	Not Available	844	Open in IMG/M
3300009824\|Ga0116219_10356533	Not Available	819	Open in IMG/M
3300010379\|Ga0136449_101905197	Not Available	883	Open in IMG/M
3300010379\|Ga0136449_103143468	Not Available	640	Open in IMG/M
3300010379\|Ga0136449_103186556	Not Available	634	Open in IMG/M
3300010379\|Ga0136449_103676177	Not Available	580	Open in IMG/M
3300014153\|Ga0181527_1057697	Not Available	2032	Open in IMG/M
3300014158\|Ga0181521_10505542	Not Available	578	Open in IMG/M
3300014159\|Ga0181530_10410758	Not Available	687	Open in IMG/M
3300014162\|Ga0181538_10434358	Not Available	697	Open in IMG/M
3300014490\|Ga0182010_10792025	Not Available	537	Open in IMG/M
3300014494\|Ga0182017_10573943	Not Available	688	Open in IMG/M
3300017821\|Ga0187812_1138398	Not Available	786	Open in IMG/M
3300017823\|Ga0187818_10522848	Not Available	533	Open in IMG/M
3300017929\|Ga0187849_1354232	Not Available	541	Open in IMG/M
3300017931\|Ga0187877_1406590	Not Available	514	Open in IMG/M
3300017935\|Ga0187848_10253262	Not Available	743	Open in IMG/M
3300017941\|Ga0187850_10439768	Not Available	567	Open in IMG/M
3300017942\|Ga0187808_10346030	Not Available	674	Open in IMG/M
3300017975\|Ga0187782_10416833	Not Available	1022	Open in IMG/M
3300017996\|Ga0187891_1011257	All Organisms → cellular organisms → Bacteria	4699	Open in IMG/M
3300017998\|Ga0187870_1086900	Not Available	1234	Open in IMG/M
3300018001\|Ga0187815_10459269	Not Available	544	Open in IMG/M
3300018003\|Ga0187876_1173333	Not Available	739	Open in IMG/M
3300018004\|Ga0187865_1091775	Not Available	1127	Open in IMG/M
3300018004\|Ga0187865_1214578	Not Available	651	Open in IMG/M
3300018005\|Ga0187878_1269325	Not Available	616	Open in IMG/M
3300018009\|Ga0187884_10451685	Not Available	517	Open in IMG/M
3300018015\|Ga0187866_1344926	Not Available	514	Open in IMG/M
3300018019\|Ga0187874_10032382	All Organisms → cellular organisms → Bacteria	2574	Open in IMG/M
3300018023\|Ga0187889_10032106	All Organisms → cellular organisms → Bacteria	2973	Open in IMG/M
3300018026\|Ga0187857_10096340	Not Available	1444	Open in IMG/M
3300018086\|Ga0187769_10521850	Not Available	897	Open in IMG/M
3300018086\|Ga0187769_10589645	Not Available	840	Open in IMG/M
3300018088\|Ga0187771_10839835	Not Available	779	Open in IMG/M
3300018090\|Ga0187770_10282598	Not Available	1289	Open in IMG/M
3300018090\|Ga0187770_10437296	Not Available	1030	Open in IMG/M
3300023068\|Ga0224554_1096427	Not Available	686	Open in IMG/M
3300023088\|Ga0224555_1201197	Not Available	546	Open in IMG/M
3300027896\|Ga0209777_11013908	Not Available	567	Open in IMG/M
3300027905\|Ga0209415_11014888	Not Available	550	Open in IMG/M
3300032892\|Ga0335081_10381198	Not Available	1823	Open in IMG/M
3300032892\|Ga0335081_11354680	Not Available	799	Open in IMG/M
3300032892\|Ga0335081_12693999	Not Available	508	Open in IMG/M
3300033402\|Ga0326728_10002414	All Organisms → cellular organisms → Bacteria	62320	Open in IMG/M
3300033402\|Ga0326728_10155983	Not Available	2454	Open in IMG/M
3300033402\|Ga0326728_10679619	Not Available	779	Open in IMG/M
3300033405\|Ga0326727_10436579	Not Available	1177	Open in IMG/M
3300033405\|Ga0326727_10667054	Not Available	842	Open in IMG/M
3300033405\|Ga0326727_10758494	Not Available	759	Open in IMG/M
3300033755\|Ga0371489_0122982	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300033977\|Ga0314861_0056070	Not Available	2161	Open in IMG/M
3300034091\|Ga0326724_0380337	Not Available	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	59.80%
Terrestrial	Environmental → Terrestrial	40.20%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	59.80%
Soil	Environmental → Terrestrial → Soil	29.41%
Peat	Environmental → Terrestrial → Peat	10.78%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	56.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.82%
Lake	Environmental → Aquatic → Freshwater → Lake	1.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.98%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	40.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.98%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	29.41%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	11.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	8.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.90%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.96%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.98%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.98%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.98%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075521_104329131	3300006642	Arctic Peat Soil	LRWINAHKVVTITLTQAVNYSVHGISSPLGVVFELGGTLVNTFMVTFSVPIWCRLSNLARR*
Ga0105152_101419141	3300009039	Lake Sediment	LGTESFNYAVHGISSTLGVTFALGGTLVNLLFVSVVTPIWCRLGRLETR*
Ga0116222_14553103	3300009521	Peatlands Soil	EVVNYSVHGVSSPLGVTFALGGTIVNTLMVAFVVPIWCRLTRLESRLS*
Ga0116107_12023191	3300009548	Peatland	EVVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH*
Ga0116111_10113411	3300009616	Peatland	LLRWINAHRIVTITLTEAVNYSVHGISSPLGVTFALGGTLVNLCMVTFIVPIWCRLTKLETR*
Ga0116123_11079811	3300009617	Peatland	LRWINSHKVIALTANEIVNYSVHGVSSPLGVTFALGGTIVNVLMVAFVVPIWCRLSKLESRLS*
Ga0116127_10298265	3300009618	Peatland	HKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNALMVMFIVPIWCRLSNLELR*
Ga0116127_11455303	3300009618	Peatland	WISSHKVIALTTTEVVNYSVHGITSRLGVTFALGGTIVNVLMVAFVVPIWCRLSRLESRLS*
Ga0116112_11218881	3300009636	Peatland	NAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLERH*
Ga0116112_11753161	3300009636	Peatland	ITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSKLERP*
Ga0116134_11437883	3300009764	Peatland	GFKKSNPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNALMVMFIVPIWCRLSNLERH*
Ga0116219_103565331	3300009824	Peatlands Soil	INAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSKLESH*
Ga0136449_1019051974	3300010379	Peatlands Soil	FVGFKRAKPRESALRWINSHKVIALTTTEVVNYSVHGISSPLGVTFALGGTIVNVLMVAFVVPIWCRLSRLESRLS*
Ga0136449_1031434683	3300010379	Peatlands Soil	RWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNAFMVMFIVPIWCRLSNLERR
Ga0136449_1031865562	3300010379	Peatlands Soil	VHFVGFKKSNPRQTVLCWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWCRLSTLELH*
Ga0136449_1036761772	3300010379	Peatlands Soil	ARVSDRILLWVRSHKILTVTCTEIVNYFIHGVESPLGVTFALGGTLVNILRVTFIVPIWCRLSNLERR*
Ga0181533_10460142	3300014152	Bog	VGFKKAHPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSKLERH*
Ga0181533_11809134	3300014152	Bog	ALTTTEVVNYSVHGISSPLGVTFALGGTTVNTLMVTFVVPIWCRLTRLESRLS*
Ga0181527_10576971	3300014153	Bog	TVTCTEIVNYSIHGVESPLGVTFALGGTLVNILMVTFIVPIWCRLSNLERR*
Ga0181527_12814371	3300014153	Bog	ARFVGFKRAKPRESALRWINSHKVIALTTTEVVNYSVHGVSSPLGVTFALGGTIVNVLMVAFVVPIWCRLSRLESRLS*
Ga0181524_103043822	3300014155	Bog	ARPRESALRWINSHKVIALTMTEVVNYSVHGISSPLGVTFALGGTIVNTLMVTFVVPIWCRLFRLESRL*
Ga0181518_103283221	3300014156	Bog	ALRWINSHKVIALTMTEVVNYSVHGISSPLGVTFALGGTIVNTLMVAFVVPIWCRLSRLESRL*
Ga0181521_105055421	3300014158	Bog	PRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSNLESR*
Ga0181530_104107581	3300014159	Bog	RQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLINAFMVTFIVPIWCRLSNLERR*
Ga0181538_104343581	3300014162	Bog	RFVGFKRAKPRESALRWINSHKVIALTATEVVNYSVHGISSPLGVTFALGGTIVNTLMVTFVVPIWCRLTRLESRLS*
Ga0181538_105384712	3300014162	Bog	AHFVGFKKSNPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSRLESRL*
Ga0182018_103547541	3300014489	Palsa	VLRWINAHKVVTITLTEAVNYSVHGISNPLGVTFALGGTVVNAFMVTFIVPIWCRLSNLERH*
Ga0182010_107920251	3300014490	Fen	AHKVVTITLTEAANYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWCRLSTIERR*
Ga0182017_105739431	3300014494	Fen	NPRQTVLRWINAHKIVTITLTEAVNYSVHGISSPIGVVFALGGTMVNAFMVTFIVPIWCRISNLERR*
Ga0182019_111877591	3300014498	Fen	HKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWYRLSNLERR*
Ga0181536_103552443	3300014638	Bog	KVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNAFMIMFIVPIWCRLSKLESL*
Ga0182027_111000351	3300014839	Fen	VVTITLTEAVNYSVHGISSPLGVVFALGGTLVNAFMVTFIVPIWCRLSNLERS*
Ga0182027_113107831	3300014839	Fen	VVTITLTEAVNYSVHGISSPLGVTFALGGTLVNILMVTFIVPIWCRLSNLERR*
Ga0187812_11383983	3300017821	Freshwater Sediment	HQGSATEVVNYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWCRLSNLESH
Ga0187818_105228483	3300017823	Freshwater Sediment	LTTTEVVNYSVHGISSPLGVTFALGGTIVNVLMVAFVVPIWCRLSKLESRLS
Ga0187849_13542322	3300017929	Peatland	TEVVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH
Ga0187825_102948121	3300017930	Freshwater Sediment	TVLRWINAHKVVTITLTEALNYSVPGITNPLGVVCALGRTLVNIFMVMFIVPIWCRLSSLERR
Ga0187877_14065902	3300017931	Peatland	HKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSNLESH
Ga0187848_102532621	3300017935	Peatland	KKSNPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSKLERP
Ga0187853_104785742	3300017940	Peatland	ATEVVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH
Ga0187850_104397682	3300017941	Peatland	VGFKKSNPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNVFVVTFIVPIWCRLSNLESR
Ga0187808_103460301	3300017942	Freshwater Sediment	TEVVNYSVHGISNPLGVTFALGGTLVNAFMVTFIVPIWCRLSKLESH
Ga0187781_107516051	3300017972	Tropical Peatland	KVIALTMTEVVNYSVHGISSPLGVTFALGGTIVNTLMVAIVVPIWCRLTRLECRS
Ga0187782_104168334	3300017975	Tropical Peatland	WINAHKVVSLTVTEAVNYSVHGISSPLGVTFALGGTLVNALMIAFIVPIWCRLSRLEAH
Ga0187782_115766822	3300017975	Tropical Peatland	LRWINSHKVITLTTTEVVNYSVHGISSPLGVTFALGGTIVNVLVVAFVVPIWCRLSRLESRLS
Ga0187891_10112571	3300017996	Peatland	TTEVVNYSVHGISSPLGVTFALGGTIVNTLMVAFVVPIWCRLSRLESRLS
Ga0187891_12700292	3300017996	Peatland	VLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNLCMVTFIVPIWCRLSKLESR
Ga0187870_10869001	3300017998	Peatland	QTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSNLESR
Ga0187815_104592691	3300018001	Freshwater Sediment	KRAKPRETALRWISSHKVIALTATEIVNYSVHGISSPLGVTFALGGTIVNVLMVAFVVPIWCRLSRLESRFS
Ga0187876_11733333	3300018003	Peatland	VVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSNLESR
Ga0187865_10917751	3300018004	Peatland	RESALRWINSHKVITLTATEVVNYSVHGVSSPLGVTFALGGTIVNVLMVAFVVPIWCRLSRLESRLS
Ga0187865_12052941	3300018004	Peatland	KSNPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSNLESH
Ga0187865_12145783	3300018004	Peatland	GFKRSTPRESALRWINSHKVITLTATEIVNYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWCRLSNLERH
Ga0187865_12711642	3300018004	Peatland	QSVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNLCMVTFIVPIWCRLSKLESR
Ga0187878_12693252	3300018005	Peatland	ATEVVNYSVHGITSPLGVTFALGGTLVNAFMVTFIVPIWCRLSSLERR
Ga0187884_104516851	3300018009	Peatland	VHFVGFKKSNPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSKLERP
Ga0187866_13449262	3300018015	Peatland	WINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH
Ga0187880_10830921	3300018016	Peatland	ANPRQVVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWCRLSKLERP
Ga0187886_13684932	3300018018	Peatland	EHPLTVTLTEAVNYSVHGISTPLGVTFTLGGTLVNIFMVTFIVPIWCRLSNLESH
Ga0187874_100323825	3300018019	Peatland	HKVITLTATEVVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH
Ga0187861_104032613	3300018020	Peatland	RWVNAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH
Ga0187889_100321066	3300018023	Peatland	TEVVNYSVHGISNPLGVTFALGGTIVNVLMVTFVVPIWYRLSRLESRL
Ga0187889_103848862	3300018023	Peatland	FVGFKKAHPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSNLESH
Ga0187881_100873474	3300018024	Peatland	AKPRESALRWINSHKVITLTATEVVNYSVHGISNPLGVTFALGGTIVNVLMVTFVVPIWYRLSRLESRL
Ga0187881_103567531	3300018024	Peatland	ESALRWINSHKVITLTATEVVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH
Ga0187881_104079421	3300018024	Peatland	ATEVVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESR
Ga0187885_104960362	3300018025	Peatland	LTEAVNYSVHGISTPLGVTFTLGGTLVNIFMVTFIVPIWCRLSNLESH
Ga0187857_100963404	3300018026	Peatland	PRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNALMVMFIVPIWCRLSNLELR
Ga0187857_101506313	3300018026	Peatland	INSHKVITLTATEVVNYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWCRLSNLESH
Ga0187869_105911031	3300018030	Peatland	KAHPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNALMVMFIVPIWCRLSNLELR
Ga0187851_107642972	3300018046	Peatland	WINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNALMVMFIVPIWCRLSNLERR
Ga0187769_105218501	3300018086	Tropical Peatland	WINSHKVIALTTTEVVNYSVHGISSPLGVTFALGGSIVNVLMVTFVVPIWCRLSKLEGL
Ga0187769_105896451	3300018086	Tropical Peatland	EVVNYSVHGISSPLGVTFALGGTIVNTLMVAFVVPIWCRLSKLEGL
Ga0187771_106490732	3300018088	Tropical Peatland	PREAALRWINSHKVIALTTTEVVNYSVHGISSPLGVTFALGGTIANTLMVAFVVPIWCRLSRLECRL
Ga0187771_108398351	3300018088	Tropical Peatland	TEVVNYSVHGISSPLGVTFALGGTIVNVLMVTFVVPIWCRLSRLESRLS
Ga0187771_109930582	3300018088	Tropical Peatland	ESALRWINSHKVIALTATEVVNYSVHGISSPLGVTFALGGTIVNTLMVAIVVPIWCRLTRLECRS
Ga0187770_102825984	3300018090	Tropical Peatland	ALTMTEVVNYSVHGISSPLGVTFALGGTIVNTLMVTFVVPIWCRLSRLESRLS
Ga0187770_104372964	3300018090	Tropical Peatland	LTATEVVNYSVHGISSPLGVTFALGGTIVNVLMVTFVVPIWCRLSKLEGL
Ga0187770_116725181	3300018090	Tropical Peatland	ALRWINSHKVIALTTTEVVNYSVHGISCPLGVTFALGGTIVNTLMVAFVVPIWCRLSRLESRL
Ga0224554_10964273	3300023068	Soil	HKILTVTCTEIVNYSIHGVESPLGVSFALGGTMVNILMVMFIVPIWCRLSNLERR
Ga0224555_12011972	3300023088	Soil	INAHKVVTITLTEAVNYSVHGISSPLGVCFALGGTLVNIFMVMFIVPIWGRLSNLERR
Ga0208323_10710581	3300025439	Peatland	GFKRSTPRESALRWINSHKVITLTATEVVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH
Ga0208692_10857761	3300025472	Peatland	VVTITLTEAVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSNLESH
Ga0208820_10271871	3300025576	Peatland	VTITLTEAVNYSVHGISSPLGVTFALGGTLVNTFMVAFIVPIWCRLSTLELR
Ga0208457_10935852	3300025812	Peatland	SHKVITLTATEVVNYSVHGISSPLGVTFALGGTLVNAFMVAFIVPIWCRLSNLESH
Ga0209777_110139083	3300027896	Freshwater Lake Sediment	ALTTTEVVNYSVHGISSPLGVTFALGGTLVNAFMVMFIVPIWCRLSNLESH
Ga0209415_110148881	3300027905	Peatlands Soil	GFKKSNPRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWCRLSNLERR
Ga0247275_10700773	3300029817	Soil	LTEAVNYSVHGISSPLGVCFALGGTLVNIFMVTFIVPIWCRLSSLERR
Ga0315278_111913051	3300031997	Sediment	KVVTLLGTESFNYAVHGISSTLGVTFALGGTLVNLLFVSVVTPIWCRLGRLETR
Ga0335081_103811981	3300032892	Soil	ITLTATEVVNYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWCRLSNLESH
Ga0335081_113546801	3300032892	Soil	RESALSWINSHKVIALTTTEVVNYSVHGISSPLGVTFALGGTIVNVLMVAFVVPIWCRLSRLESRLS
Ga0335081_126939992	3300032892	Soil	RCHKILTVTCTEILNYSVHGVESPLGVTFALGGTLVNVLMVTFIVPIWCRLSNPERR
Ga0326728_1000241412	3300033402	Peat Soil	VRGVQRAKDVQTAHILRWINAHNVVTITLTEAENYSVHGISSPLGVTFALGGTLVNLLMVTFIVPLWCRLSKLESWL
Ga0326728_101559831	3300033402	Peat Soil	KPRESALRWINSHKVIALTATEVVNYSVHGISSPLGVTFALGGTIVNTLMVTFVVPIWCRLSRLESRL
Ga0326728_106796191	3300033402	Peat Soil	KKSNPRQAVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVMFIVPIWSRLSKLEDR
Ga0326727_104365794	3300033405	Peat Soil	SHKILTVTCTEIVNYSIHGIESPLGVTFALGGTLVNILMVTFIVPIWCRLSNLERR
Ga0326727_106670541	3300033405	Peat Soil	LRWINAHKVVTLTLTEAVNYSVHGISSPLGVTFALGGTIVNAFMVTFIVPIWCRLSNLEL
Ga0326727_107584943	3300033405	Peat Soil	ITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSNLEIH
Ga0326727_110748733	3300033405	Peat Soil	KVITLTATEVVNYSVHGISSPLGVTFALGGTLVNAFMVTFIVPIWCRLSNLESH
Ga0371489_0122982_1301_1465	3300033755	Peat Soil	KVITLTATEVVNYSVHGISSPLGVTFALGGTLVNLLMVTFIVPIWCRLSKLESH
Ga0314861_0056070_2_181	3300033977	Peatland	NSHKVITLTATEVVNYSVHGISSPLGVTFALGGTIVNVLMVTFVVPIWCQLFKLESRLS
Ga0326724_0380337_554_754	3300034091	Peat Soil	PRQTVLRWINAHKVVTITLTEAVNYSVHGISSPLGVTFALGGTLVNIFMVTFIVPIWCRLSNLESH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101012

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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