NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F101073

Metagenome Family F101073

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101073
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 62 residues
Representative Sequence MRYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGNAMVMIDK
Number of Associated Samples 51
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 19.61 %
% of genes near scaffold ends (potentially truncated) 23.53 %
% of genes from short scaffolds (< 2000 bps) 90.20 %
Associated GOLD sequencing projects 32
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (54.902 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(86.275 % of family members)
Environment Ontology (ENVO) Unclassified
(93.137 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.275 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.94%    β-sheet: 25.81%    Coil/Unstructured: 32.26%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF03796DnaB_C 29.41
PF11753DUF3310 16.67
PF02195ParBc 3.92
PF13481AAA_25 0.98
PF13662Toprim_4 0.98
PF01555N6_N4_Mtase 0.98
PF04466Terminase_3 0.98
PF04860Phage_portal 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 29.41
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 29.41
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.98
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.98
COG1783Phage terminase large subunitMobilome: prophages, transposons [X] 0.98
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A54.90 %
All OrganismsrootAll Organisms45.10 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664017|2232467569Not Available528Open in IMG/M
3300005512|Ga0074648_1041664All Organisms → Viruses → Predicted Viral2120Open in IMG/M
3300006025|Ga0075474_10200128Not Available613Open in IMG/M
3300006026|Ga0075478_10028932Not Available1852Open in IMG/M
3300006026|Ga0075478_10036346Not Available1634Open in IMG/M
3300006026|Ga0075478_10097923All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_131937Open in IMG/M
3300006026|Ga0075478_10122427Not Available821Open in IMG/M
3300006026|Ga0075478_10186306Not Available638Open in IMG/M
3300006637|Ga0075461_10028799All Organisms → Viruses → Predicted Viral1830Open in IMG/M
3300006802|Ga0070749_10114160All Organisms → Viruses → Predicted Viral1590Open in IMG/M
3300006802|Ga0070749_10159296All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_1311309Open in IMG/M
3300006802|Ga0070749_10326816Not Available855Open in IMG/M
3300006802|Ga0070749_10437200Not Available718Open in IMG/M
3300006802|Ga0070749_10549483Not Available626Open in IMG/M
3300006802|Ga0070749_10763223Not Available514Open in IMG/M
3300006810|Ga0070754_10083844All Organisms → Viruses → Predicted Viral1602Open in IMG/M
3300006810|Ga0070754_10122297Not Available1267Open in IMG/M
3300006810|Ga0070754_10146549All Organisms → Viruses → Predicted Viral1132Open in IMG/M
3300006810|Ga0070754_10192299Not Available955Open in IMG/M
3300006810|Ga0070754_10213481Not Available894Open in IMG/M
3300006810|Ga0070754_10341102Not Available665Open in IMG/M
3300006810|Ga0070754_10375345Not Available626Open in IMG/M
3300006810|Ga0070754_10423067Not Available580Open in IMG/M
3300006810|Ga0070754_10526982Not Available507Open in IMG/M
3300006867|Ga0075476_10029420All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2313Open in IMG/M
3300006867|Ga0075476_10099742All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_1311117Open in IMG/M
3300006867|Ga0075476_10318729Not Available542Open in IMG/M
3300006868|Ga0075481_10108302All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales1028Open in IMG/M
3300006868|Ga0075481_10250970Not Available624Open in IMG/M
3300006870|Ga0075479_10252618All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_131698Open in IMG/M
3300006916|Ga0070750_10060268All Organisms → Viruses → Predicted Viral1818Open in IMG/M
3300006916|Ga0070750_10114216All Organisms → cellular organisms → Bacteria1243Open in IMG/M
3300006916|Ga0070750_10374988All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300006919|Ga0070746_10072204All Organisms → cellular organisms → Bacteria1759Open in IMG/M
3300006919|Ga0070746_10274506Not Available781Open in IMG/M
3300007234|Ga0075460_10132430Not Available878Open in IMG/M
3300007236|Ga0075463_10266811Not Available550Open in IMG/M
3300007344|Ga0070745_1090741All Organisms → Viruses → Predicted Viral1204Open in IMG/M
3300007344|Ga0070745_1118464All Organisms → Viruses → Predicted Viral1022Open in IMG/M
3300007344|Ga0070745_1156489Not Available861Open in IMG/M
3300007344|Ga0070745_1179243Not Available791Open in IMG/M
3300007344|Ga0070745_1300842Not Available571Open in IMG/M
3300007345|Ga0070752_1065912All Organisms → Viruses → Predicted Viral1616Open in IMG/M
3300007345|Ga0070752_1108886All Organisms → Viruses → Predicted Viral1177Open in IMG/M
3300007345|Ga0070752_1219235Not Available751Open in IMG/M
3300007345|Ga0070752_1348147Not Available556Open in IMG/M
3300007346|Ga0070753_1091131All Organisms → Viruses → Predicted Viral1199Open in IMG/M
3300007346|Ga0070753_1254830Not Available636Open in IMG/M
3300007346|Ga0070753_1359137Not Available512Open in IMG/M
3300007538|Ga0099851_1007277All Organisms → cellular organisms → Bacteria4598Open in IMG/M
3300007539|Ga0099849_1119455All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300007541|Ga0099848_1160964Not Available825Open in IMG/M
3300007542|Ga0099846_1098003Not Available1081Open in IMG/M
3300007542|Ga0099846_1136969Not Available886Open in IMG/M
3300007960|Ga0099850_1190764All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_131810Open in IMG/M
3300007960|Ga0099850_1353048Not Available550Open in IMG/M
3300010296|Ga0129348_1154677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Erysipelotrichia → unclassified Erysipelotrichia → Erysipelotrichia bacterium793Open in IMG/M
3300010297|Ga0129345_1024101All Organisms → Viruses → Predicted Viral2372Open in IMG/M
3300010299|Ga0129342_1158781All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_131820Open in IMG/M
3300010300|Ga0129351_1184950Not Available813Open in IMG/M
3300010318|Ga0136656_1187104Not Available698Open in IMG/M
3300010318|Ga0136656_1245116Not Available591Open in IMG/M
3300017963|Ga0180437_10982746Not Available604Open in IMG/M
3300017963|Ga0180437_11268236Not Available524Open in IMG/M
3300017987|Ga0180431_10423955All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae → Roseivirga → Roseivirga spongicola941Open in IMG/M
3300017989|Ga0180432_10788556Not Available660Open in IMG/M
3300022057|Ga0212025_1011344All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300022071|Ga0212028_1037351All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes896Open in IMG/M
3300022167|Ga0212020_1090536Not Available511Open in IMG/M
3300022187|Ga0196899_1043380All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_1311510Open in IMG/M
3300022187|Ga0196899_1200623Not Available528Open in IMG/M
3300022187|Ga0196899_1213183Not Available506Open in IMG/M
3300022198|Ga0196905_1004313Not Available5103Open in IMG/M
3300022198|Ga0196905_1056671Not Available1103Open in IMG/M
3300025610|Ga0208149_1084331All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae → Roseivirga → Roseivirga spongicola779Open in IMG/M
3300025630|Ga0208004_1045209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Erysipelotrichia → unclassified Erysipelotrichia → Erysipelotrichia bacterium1210Open in IMG/M
3300025647|Ga0208160_1052009Not Available1162Open in IMG/M
3300025653|Ga0208428_1002256Not Available7815Open in IMG/M
3300025671|Ga0208898_1031768All Organisms → Viruses → Predicted Viral2139Open in IMG/M
3300025671|Ga0208898_1048725All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_1311555Open in IMG/M
3300025671|Ga0208898_1050172All Organisms → Viruses → Predicted Viral1520Open in IMG/M
3300025671|Ga0208898_1056702All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_1311384Open in IMG/M
3300025671|Ga0208898_1081626All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae → Roseivirga → Roseivirga spongicola1038Open in IMG/M
3300025687|Ga0208019_1111042Not Available826Open in IMG/M
3300025751|Ga0208150_1052014Not Available1394Open in IMG/M
3300025751|Ga0208150_1184087Not Available650Open in IMG/M
3300025759|Ga0208899_1032271Not Available2435Open in IMG/M
3300025769|Ga0208767_1215503Not Available631Open in IMG/M
3300025818|Ga0208542_1203769Not Available510Open in IMG/M
3300025853|Ga0208645_1070437All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_1311564Open in IMG/M
3300025853|Ga0208645_1148976Not Available893Open in IMG/M
3300025889|Ga0208644_1177190Not Available949Open in IMG/M
3300025889|Ga0208644_1196335Not Available881Open in IMG/M
3300027917|Ga0209536_100083234All Organisms → cellular organisms → Bacteria4099Open in IMG/M
3300027917|Ga0209536_100354989All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_1311833Open in IMG/M
3300034374|Ga0348335_007286All Organisms → cellular organisms → Bacteria6532Open in IMG/M
3300034374|Ga0348335_046022All Organisms → Viruses → Predicted Viral1731Open in IMG/M
3300034374|Ga0348335_058277All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_1311434Open in IMG/M
3300034374|Ga0348335_109573All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300034375|Ga0348336_096870All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300034418|Ga0348337_089420All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_1311043Open in IMG/M
3300034418|Ga0348337_091287Not Available1025Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous86.27%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.88%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment3.92%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment1.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Oil-Contaminated → Marine0.98%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664017Marine microbial communities from Deepwater Horizon oil blowout, Alabama, USA - sample Oil_dispersant_biofilmEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017987Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaGEnvironmentalOpen in IMG/M
3300017989Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaGEnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
22324720952228664017MarineMRYTLCIKGKPDRDYPTLQEAEKAIERELGGFEKINDYLKRNKHVRRSYVCARGKAMV
Ga0074648_104166423300005512Saline Water And SedimentMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGNAMVMIDK*
Ga0075474_1020012823300006025AqueousMRFTLCIKAKPDRDYETLQDAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIEK*
Ga0075478_1002893233300006026AqueousLRFTLCIKAKPDRDYETLQDAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIEK*
Ga0075478_1003634623300006026AqueousMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRAKHVRRSYVCTRGKAMVMIDN*
Ga0075478_1009792323300006026AqueousMRYTLCIKGKPDRDYETIQEAEKVIEKELGAFENINDYLQRAKHVRRSYVCSRGKAMVMI
Ga0075478_1012242733300006026AqueousRAIYLSSMRYTLCIKGNPDRDYETLQEAENVIEKELGAFENINDYLQRGKHVRRSYVCSRGNAMVMIDK*
Ga0075478_1018630623300006026AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCTGGNAMVMIDK*
Ga0075461_1002879913300006637AqueousMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGNAMVMIDK*
Ga0070749_1011416053300006802AqueousMRYTLCIKGKPDRDYLTLQEAEKVIEKELGAFDKINDYLQRNKHVRRSYVCARGNAMVMIDK*
Ga0070749_1015929623300006802AqueousMRYTLCIKGKPDRDYETLQEAEKIIEKELGAFENINDYLQRAKHVRRSYVC
Ga0070749_1032681623300006802AqueousMRYTLCINGKPDRDYETLQEAEKVIEKELGAFDNINDYLQRGKHVRRSYVCARGNAMVMIDK*
Ga0070749_1043720013300006802AqueousIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCARGNAMVMIEK*
Ga0070749_1054948333300006802AqueousMRFTLCIKGKPDRDYETLQAAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIEK*
Ga0070749_1076322323300006802AqueousMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIDK*
Ga0070754_1008384453300006810AqueousMRYTLCIKGKPDRDYLTLQEAEKVIEKELGAFDKINDYLQRNKHVRRSYVCARGNAMVMIDKLCK*
Ga0070754_1012229733300006810AqueousMRFTLCIKGKPDRDYGTLQEAEKIIEKELGAFDKINDYLQRGKHVRRSYVCSRGNAMVMIDK*
Ga0070754_1014654923300006810AqueousMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRAKHGRRSYVCTRGKAMVMIDN*
Ga0070754_1019229923300006810AqueousMRYTLCIKGNPDRDYPTLQEAEKIIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIDK*
Ga0070754_1021348123300006810AqueousMRYTLCIKGKPDRDYETLQKAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIDK*
Ga0070754_1034110223300006810AqueousMRYTLCIKGNPDRDYETLQEAENVIEKELGAFENINDYLQRNKHVRRSYVCSRGNAMVMIDK*
Ga0070754_1037534523300006810AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCARGNAMVMIEK*
Ga0070754_1042306723300006810AqueousMSLESKTIYLSSMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRAKHVRRSYVCARGSAMVMIDK*
Ga0070754_1052698223300006810AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCSRGNAMVMIEK*
Ga0075476_1002942023300006867AqueousMRYTLCIKGNPDRDYETLQDAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIEK*
Ga0075476_1009974223300006867AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCARGNAMVMIDK*
Ga0075476_1031872923300006867AqueousMRYTLCIKGKPDRDYETLQQAEKVIEKELGAFENINDYLQRAKHVRRSYVCSRGKAMVMIEN*
Ga0075481_1010830213300006868AqueousGKPDHDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCSRGSAMVMIDK*
Ga0075481_1025097013300006868AqueousIYLSSMRFTLCIKGKPDRDYGTLQEAEKIIEKELGAFDKINDYLQRGKHVRRSYVCSRGNAMVMIDK*
Ga0075479_1025261823300006870AqueousMRYTLCIKGKPDHDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCSRGSAMVMIDK*
Ga0070750_1006026853300006916AqueousMRFTLCIKGKPDRDYETLKEAEKVIEKELGAFENINDYLQRGKHVRRSYVCARGNAMVMIDK*
Ga0070750_1011421623300006916AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRAKHVRRSYVCTRGKAMVMIDN*
Ga0070750_1037498813300006916AqueousMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCARGNAMVMIEK*
Ga0070746_1007220413300006919AqueousLAIYLSSMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCARGNAMVMIEK*
Ga0070746_1027450623300006919AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFDNINDYLQRGKHVRRSYVCARGSAMVMIEK*
Ga0075460_1013243043300007234AqueousYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCTRGNAMVMIDK
Ga0075463_1026681123300007236AqueousYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRAKHVRRSYVCARGNAMVMIDK
Ga0070745_109074123300007344AqueousMRYTLCINANPDRDYGTLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCARGNAMVMIEK*
Ga0070745_111846423300007344AqueousMRFTLCIKGKPDRDYGTLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCTGGNAMVMIDK*
Ga0070745_115648913300007344AqueousRFTLCIKGKPDHDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGNAMVMIDK*
Ga0070745_117924333300007344AqueousRFTLCIKGKPDRDYGTLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCTGGNAMVMIDK*
Ga0070745_130084213300007344AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCARGNAMVIIDK*
Ga0070752_106591223300007345AqueousMRYTLCINGNPDRDYETLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCARGNAMVIIDK*
Ga0070752_110888623300007345AqueousMRFTLCIKAKPDRDYETLQDAEKVIEKELGAFENINDYLQRGKHVRRSYVC
Ga0070752_121923523300007345AqueousMRYTLCIKGKPDRDYPTLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCTRGNAMVMIEK*
Ga0070752_134814713300007345AqueousMRYTLCIKGKPDRDYETLKEAEKVIEKELGAFENINDYLQRAKHVRRSYVCARGSAMVMIDK*
Ga0070753_109113143300007346AqueousCIKGKPDRDYETLKEAEKVIEKELGAFENINDYLQRSKHVRRSYVCTRGNAMVMIKK*
Ga0070753_125483023300007346AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFEKINDYLQRAKHVRRSYVCTGGNAMVMIDK*
Ga0070753_135913723300007346AqueousMRYTLCINGNPDRDYETLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCARGN
Ga0099851_100727753300007538AqueousMRYTLCIKGNPDRDYETLQEAEKVIEKELGVFDKVNDYLQRGKHVRRSYVCSRGSAMVMIDK*
Ga0099849_111945523300007539AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFEKINDYLQRAKHVRRSYVCARGSAMVMIDK*
Ga0099848_116096423300007541AqueousMRYTLCIKGNPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGNAMVMIDK*
Ga0099846_109800313300007542AqueousMRYTLCIKGNPDRDYETLQEAEKVIEKELGVFDKVNDYLQRGKHVRRSYVCSRGNAMVMIDK*
Ga0099846_113696923300007542AqueousLRYTLCIKGKPDRDYETLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCARGNAMVMIDK*
Ga0099850_119076423300007960AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRAKHVRRSYVCARGNAMVMIDK*
Ga0099850_135304813300007960AqueousPDGDYETLQEAEKVIEKELGAFDKINDYLKRGKHVRRSYVCARGNAMVMIDK*
Ga0129348_115467713300010296Freshwater To Marine Saline GradientKPDRDYETLQEAEKVIEKELGAFENINDYLQRAKHVRRSYVCARGSAMVMIDK*
Ga0129345_102410143300010297Freshwater To Marine Saline GradientMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCTGGNAMVMIDK*
Ga0129342_115878113300010299Freshwater To Marine Saline GradientMRYTLCINGNPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGNAMVMIDK*
Ga0129351_118495023300010300Freshwater To Marine Saline GradientMRYTLCIKGNPDRDYETLQEAENVIEKELGAFENINDYLQRGKHVRRSYVCTRGNAMVMIDK*
Ga0136656_118710413300010318Freshwater To Marine Saline GradientMRYTLCIKGKPDRDYETLQEAEKVIEKELGVFENINDYLQRGKHVRRSYVCARGSAMVMIDK*
Ga0136656_124511623300010318Freshwater To Marine Saline GradientMRYTLCINGNPDRDYETLQEAEKVIEKELGAVDKINDYLQRAKHVRRSYVCSRGNAMVMIDK*
Ga0180437_1098274623300017963Hypersaline Lake SedimentMRYTLCIDGKPDRDYSTIQEAEKTIEKELGSFDKINDYLQRNKHVRRSYVCARGKAMVIIDK
Ga0180437_1126823623300017963Hypersaline Lake SedimentMRYTLCIEGKPDRDYPTLQEAEKAIERELGGFEKINDYLQRNKHVRRSYVCARGKAMVMIDK
Ga0180431_1042395523300017987Hypersaline Lake SedimentMRYTLCIKGKPDRDYETLQEADKVIEKELGAFDKINDYLQRGKHVRRSYVCSMGSAMVMIDK
Ga0180432_1078855623300017989Hypersaline Lake SedimentLRYTLCIKGKPDRDYETLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCARGNAMVMVEK
Ga0212025_101134423300022057AqueousMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRAKHVRRSYVCTRGKAMVMIDN
Ga0212028_103735123300022071AqueousMRYTLCIKGKPDRDYLTLQEAEKVIEKELGAFDKINDYLQRNKHVRRSYVCARGNAMVMIDK
Ga0212020_109053613300022167AqueousRFTILMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCTGGNAMVMIDK
Ga0196899_104338023300022187AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCTGGNAMVMIDK
Ga0196899_120062323300022187AqueousTLAIYLSSMRFTLCIKGKPDRDYGTLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCTGGNAMVMIDK
Ga0196899_121318323300022187AqueousLRFTLCIKAKPDRDYETLQDAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIEK
Ga0196905_100431353300022198AqueousMRYTLCIKGNPDRDYETLQEAEKVIEKELGVFDKVNDYLQRGKHVRRSYVCSRGSAMVMIDK
Ga0196905_105667123300022198AqueousMRYTLCIKGNPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGNAMVMIDK
Ga0208149_108433123300025610AqueousRTSLESKTIYLSSMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRAKHVRRSYVCTRGKAMVMIDN
Ga0208004_104520943300025630AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCARGNAMVMIDK
Ga0208160_105200923300025647AqueousMRYTLCIKGNPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSKGNAMVMIDK
Ga0208428_100225663300025653AqueousMRYTLCIKGNPDRDYETLQDAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIEK
Ga0208898_103176823300025671AqueousMRFTLCIKGKPDRDYGTLQEAEKIIEKELGAFDKINDYLQRGKHVRRSYVCSRGNAMVMIDK
Ga0208898_104872543300025671AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCTRGNAMVMIDK
Ga0208898_105017223300025671AqueousMRYTLCIKGNPDRDYETLQEAENVIEKELGAFENINDYLQRNKHVRRSYVCSRGNAMVMIDK
Ga0208898_105670223300025671AqueousMRYTLCIKGKPDHDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCSRGSAMVMIDK
Ga0208898_108162623300025671AqueousMRYTLCIKGNPDRDYPTLQEAEKIIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIDK
Ga0208019_111104213300025687AqueousMRYTLCIKGKPDRDYETLQEAENIIEKELGAFENINDYLQRGKHVRRSYVCTRGNAMVMIDK
Ga0208150_105201413300025751AqueousMRFTLCIKAKPDRDYETLQDAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIEK
Ga0208150_118408713300025751AqueousFTLCIKGKPDRDYGTLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCTGGNAMVMIDK
Ga0208899_103227123300025759AqueousMRFTLCIKGKPDRDYETLKEAEKVIEKELGAFENINDYLQRGKHVRRSYVCARGNAMVMIDK
Ga0208767_121550313300025769AqueousMRYTLCIKGKPDRDYETLKEAEKVIEKELGAFENINDYLQRAKHVRRSYVCARGNAMVMIDK
Ga0208542_120376913300025818AqueousLTMRYTLCIKGKPDRDYLTLQEAEKVIEKELGAFDKINDYLQRNKHVRRSYVCARGNAMVMIDK
Ga0208645_107043743300025853AqueousMRYTLCINGNPDRDYETLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCARGNAMVIIDK
Ga0208645_114897633300025853AqueousMRYTLCIKGKPDRDYETLQKAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIDK
Ga0208644_117719023300025889AqueousMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCSRGSAMVMIDK
Ga0208644_119633523300025889AqueousMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFEKINDYLQRAKHVRRSYVCTGGNAMVMIDK
Ga0209536_10008323443300027917Marine SedimentMRYTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCARGSAMVMIEK
Ga0209536_10035498923300027917Marine SedimentLAIYLSSMRFTLCIKGNPDRDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCSRGNAMVMIEK
Ga0348335_007286_13_2013300034374AqueousMRYTLCIKGKPDRDYETLQEAEKIIEKELGAFDKINDYLQRGKHVRRSYVCARGNAMVMIDK
Ga0348335_046022_1005_11933300034374AqueousMRYTLCIKGNPDRDYETLQEAENVIEKELGAFENINDYLQRGKHVRRSYVCSRGNAMVMIDK
Ga0348335_058277_98_2863300034374AqueousMRYTLCIKGKPDRDYETLQQAEKVIEKELGAFENINDYLQRAKHVRRSYVCSRGKAMVMIEN
Ga0348335_109573_3_1583300034374AqueousDRDYETLQEAENVIEKELGAFENINDYLQRNKHVRRSYVCSRGNAMVMIDK
Ga0348336_096870_762_9503300034375AqueousMRYTLCIKGKPDRDYPTLQEAEKVIEKELGAFDKINDYLQRGKHVRRSYVCTRGNAMVMIEK
Ga0348337_089420_780_9683300034418AqueousMRFTLCIKGKPDRDYETLQEAEKVIEKELGAFENINDYLQRGKHVRRSYVCARGNAMVMIDK
Ga0348337_091287_681_8693300034418AqueousMRYTLCIKGNPDRDYETLQEAEKVIEKELGAFEKINDYLQRGKHVRRSYVCARGSAMVMIDK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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