Metagenome Family F101164

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101164
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	46 residues
Representative Sequence	LIEFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMDIDHDH
Number of Associated Samples	67
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.41 %
% of genes near scaffold ends (potentially truncated)	16.67 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.980 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (24.510 % of family members)
Environment Ontology (ENVO)	Unclassified (80.392 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (80.392 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.38% β-sheet: 0.00% Coil/Unstructured: 71.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07883	Cupin_2	19.61
PF00596	Aldolase_II	5.88
PF01327	Pep_deformylase	3.92
PF00268	Ribonuc_red_sm	1.96
PF01844	HNH	1.96
PF07460	NUMOD3	0.98
PF10902	WYL_2	0.98
PF00149	Metallophos	0.98
PF13640	2OG-FeII_Oxy_3	0.98
PF02796	HTH_7	0.98
PF00085	Thioredoxin	0.98
PF01467	CTP_transf_like	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	3.92
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	1.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
All Organisms	root	All Organisms	49.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Viruses	superkingdom	All Organisms → Viruses	36.27 %
cellular organisms	root	All Organisms → cellular organisms	12.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	26.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	26.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	26.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	26.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	22.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	3.92 %
unclassified Methylococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	3.92 %
Methylococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.98 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.80 %
Polynucleobacter antarcticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter antarcticus	3.92 %
Methylococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10170230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter antarcticus	504	Open in IMG/M
3300005580\|Ga0049083_10100053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter antarcticus	1005	Open in IMG/M
3300005581\|Ga0049081_10070418	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1315	Open in IMG/M
3300005581\|Ga0049081_10172102	Not Available	785	Open in IMG/M
3300005581\|Ga0049081_10184854	Not Available	752	Open in IMG/M
3300005581\|Ga0049081_10287845	Not Available	568	Open in IMG/M
3300005581\|Ga0049081_10335059	Not Available	515	Open in IMG/M
3300005582\|Ga0049080_10070515	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1198	Open in IMG/M
3300006484\|Ga0070744_10014843	All Organisms → Viruses → Predicted Viral	2310	Open in IMG/M
3300006484\|Ga0070744_10152432	Not Available	663	Open in IMG/M
3300007559\|Ga0102828_1038611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1088	Open in IMG/M
3300007603\|Ga0102921_1200548	Not Available	717	Open in IMG/M
3300007974\|Ga0105747_1245512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	598	Open in IMG/M
3300008107\|Ga0114340_1001283	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15653	Open in IMG/M
3300008113\|Ga0114346_1008564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7166	Open in IMG/M
3300008448\|Ga0114876_1014312	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4347	Open in IMG/M
3300008459\|Ga0114865_1189165	Not Available	584	Open in IMG/M
3300008996\|Ga0102831_1207200	Not Available	648	Open in IMG/M
3300008996\|Ga0102831_1233646	Not Available	607	Open in IMG/M
3300009051\|Ga0102864_1219935	Not Available	516	Open in IMG/M
3300009068\|Ga0114973_10653521	Not Available	537	Open in IMG/M
3300009152\|Ga0114980_10028808	All Organisms → Viruses → Predicted Viral	3439	Open in IMG/M
3300009152\|Ga0114980_10406301	Not Available	781	Open in IMG/M
3300009155\|Ga0114968_10097918	All Organisms → Viruses → Predicted Viral	1797	Open in IMG/M
3300009158\|Ga0114977_10302902	Not Available	910	Open in IMG/M
3300009159\|Ga0114978_10002057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16735	Open in IMG/M
3300009159\|Ga0114978_10006137	Not Available	9548	Open in IMG/M
3300009159\|Ga0114978_10169879	Not Available	1393	Open in IMG/M
3300009159\|Ga0114978_10187298	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1314	Open in IMG/M
3300009161\|Ga0114966_10317997	Not Available	936	Open in IMG/M
3300009163\|Ga0114970_10409280	Not Available	752	Open in IMG/M
3300009163\|Ga0114970_10555554	Not Available	621	Open in IMG/M
3300009164\|Ga0114975_10298253	Not Available	893	Open in IMG/M
3300009180\|Ga0114979_10197964	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1218	Open in IMG/M
3300011010\|Ga0139557_1071090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter antarcticus	582	Open in IMG/M
3300011010\|Ga0139557_1085060	Not Available	525	Open in IMG/M
3300011268\|Ga0151620_1263428	Not Available	510	Open in IMG/M
3300012012\|Ga0153799_1041660	Not Available	859	Open in IMG/M
3300012017\|Ga0153801_1011182	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1630	Open in IMG/M
3300012666\|Ga0157498_1021739	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	999	Open in IMG/M
3300013004\|Ga0164293_10091213	Not Available	2358	Open in IMG/M
3300013005\|Ga0164292_10532430	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	766	Open in IMG/M
3300013372\|Ga0177922_10149704	Not Available	771	Open in IMG/M
3300013372\|Ga0177922_10430769	Not Available	586	Open in IMG/M
3300013372\|Ga0177922_10780697	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	786	Open in IMG/M
3300017701\|Ga0181364_1008676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1727	Open in IMG/M
3300017723\|Ga0181362_1004044	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3123	Open in IMG/M
3300017736\|Ga0181365_1068662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter antarcticus	875	Open in IMG/M
3300017761\|Ga0181356_1102837	Not Available	928	Open in IMG/M
3300017761\|Ga0181356_1104631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	918	Open in IMG/M
3300017774\|Ga0181358_1038466	Not Available	1846	Open in IMG/M
3300017774\|Ga0181358_1179765	Not Available	704	Open in IMG/M
3300017778\|Ga0181349_1002034	Not Available	8716	Open in IMG/M
3300017778\|Ga0181349_1067297	Not Available	1379	Open in IMG/M
3300017784\|Ga0181348_1058036	All Organisms → Viruses → Predicted Viral	1572	Open in IMG/M
3300017784\|Ga0181348_1121033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1005	Open in IMG/M
3300017785\|Ga0181355_1086996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1301	Open in IMG/M
3300019784\|Ga0181359_1003326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4902	Open in IMG/M
3300019784\|Ga0181359_1033414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1990	Open in IMG/M
3300019784\|Ga0181359_1092667	Not Available	1118	Open in IMG/M
3300019784\|Ga0181359_1096148	Not Available	1092	Open in IMG/M
3300019784\|Ga0181359_1161366	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	759	Open in IMG/M
3300020151\|Ga0211736_10113951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1451	Open in IMG/M
3300020151\|Ga0211736_10212931	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	715	Open in IMG/M
3300020159\|Ga0211734_10006362	Not Available	1167	Open in IMG/M
3300020159\|Ga0211734_10524707	All Organisms → cellular organisms → Bacteria	2440	Open in IMG/M
3300020161\|Ga0211726_10553769	Not Available	1308	Open in IMG/M
3300020161\|Ga0211726_10883738	All Organisms → Viruses → Predicted Viral	1698	Open in IMG/M
3300020161\|Ga0211726_10997690	Not Available	829	Open in IMG/M
3300020161\|Ga0211726_11014089	Not Available	1687	Open in IMG/M
3300020162\|Ga0211735_10727837	Not Available	642	Open in IMG/M
3300020172\|Ga0211729_10234126	Not Available	908	Open in IMG/M
3300020172\|Ga0211729_10861339	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1353	Open in IMG/M
3300020205\|Ga0211731_10877347	Not Available	1213	Open in IMG/M
3300022190\|Ga0181354_1210460	Not Available	574	Open in IMG/M
3300022190\|Ga0181354_1212583	Not Available	570	Open in IMG/M
3300022407\|Ga0181351_1139461	Not Available	886	Open in IMG/M
3300022407\|Ga0181351_1255874	Not Available	542	Open in IMG/M
3300022407\|Ga0181351_1272671	Not Available	513	Open in IMG/M
3300023174\|Ga0214921_10002750	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	28033	Open in IMG/M
3300023174\|Ga0214921_10013338	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9669	Open in IMG/M
3300023179\|Ga0214923_10221234	Not Available	1095	Open in IMG/M
3300024346\|Ga0244775_11296649	Not Available	564	Open in IMG/M
3300027608\|Ga0208974_1101922	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	765	Open in IMG/M
3300027631\|Ga0208133_1023114	Not Available	1595	Open in IMG/M
3300027759\|Ga0209296_1160881	Not Available	999	Open in IMG/M
3300027763\|Ga0209088_10052995	All Organisms → Viruses → Predicted Viral	1965	Open in IMG/M
3300027782\|Ga0209500_10014806	All Organisms → Viruses → Predicted Viral	4678	Open in IMG/M
3300027782\|Ga0209500_10244799	Not Available	786	Open in IMG/M
3300027798\|Ga0209353_10138942	Not Available	1087	Open in IMG/M
3300027798\|Ga0209353_10398327	Not Available	565	Open in IMG/M
3300027963\|Ga0209400_1065928	All Organisms → Viruses → Predicted Viral	1801	Open in IMG/M
3300028394\|Ga0304730_1118880	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1112	Open in IMG/M
3300031787\|Ga0315900_10101638	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2797	Open in IMG/M
3300031857\|Ga0315909_10613297	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	724	Open in IMG/M
3300033996\|Ga0334979_0000284	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	39988	Open in IMG/M
3300033996\|Ga0334979_0034415	All Organisms → Viruses → Predicted Viral	3354	Open in IMG/M
3300034068\|Ga0334990_0132496	All Organisms → Viruses → Predicted Viral	1357	Open in IMG/M
3300034082\|Ga0335020_0403875	Not Available	658	Open in IMG/M
3300034104\|Ga0335031_0194091	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1379	Open in IMG/M
3300034117\|Ga0335033_0164659	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1223	Open in IMG/M
3300034119\|Ga0335054_0324394	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	898	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.20%
Marine	Environmental → Aquatic → Marine	9.80%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	52.94%
Lentic	Environmental → Aquatic → Freshwater → Lentic	32.35%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.96%
Ice	Environmental → Aquatic → Freshwater → Ice	1.96%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.98%
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	52.94%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	32.35%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	24.51%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	19.61%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	16.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.76%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.84%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.90%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.92%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.96%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	1.96%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.98%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008459	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - July 8, 2014 all contigs	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012666	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_101702302	3300003277	Freshwater Lake	LIEFKDLQSDDPIIQLELEMLQQLNPIFLRTEELPEDYDILKDEQC*
Ga0049083_101000534	3300005580	Freshwater Lentic	LIEFKDLQSDDPIIQLELEMLQQLNPIFLRTEELPEDYDILKDKQC*
Ga0049081_100704183	3300005581	Freshwater Lentic	LIEFKDLQSDDSDIQKTLEMLQELNPIFLRTEELPNDYEMDIDHGH*
Ga0049081_101721023	3300005581	Freshwater Lentic	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEIPESYYGAYGA*
Ga0049081_101848543	3300005581	Freshwater Lentic	MINFKDLQSDDPIIQGELDMLKELNPVFLRIEELPDDYEMSIDHGH*
Ga0049081_102878453	3300005581	Freshwater Lentic	LIEFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEM
Ga0049081_103350592	3300005581	Freshwater Lentic	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMDIEHDH*
Ga0049080_100705154	3300005582	Freshwater Lentic	LIEFKDLQSDDPIIQKELEMLQQLNPIFLRIEELPDDYEMFGDEK*
Ga0070744_100148436	3300006484	Estuarine	LIEFKDLQSDDSNIQKTLEMLQELNPIFLRTEELPNDYEMDIDHDH*
Ga0070744_101524321	3300006484	Estuarine	MIEFKDLQSDDPIIQGELDMLKELNPIFLRIEELPDDYEMDMSNVH*
Ga0102828_10386115	3300007559	Estuarine	LIEFKDLQSDDSNIQKTLEMLQELNPIFLRIEELPDDYEMNIDHDH*
Ga0102921_12005482	3300007603	Estuarine	MINFKDLQSDDPIIQGELDMLKELNPIFLRIEELPDDYEYTTNTND*
Ga0105747_12455122	3300007974	Estuary Water	LIEFKDLQSDDPNIQGELDMLKELNPVFLRIEELPDDYEYTTNTND*
Ga0114340_10012836	3300008107	Freshwater, Plankton	MIEFKDLQSDDPIIQGELDMLKELNPIFLRIEDLPDDYEMPKEYNHGH*
Ga0114346_10085646	3300008113	Freshwater, Plankton	MIEFKDLQSDDPIIQGELDMLKELNPIFLRIEENA*
Ga0114876_10143121	3300008448	Freshwater Lake	MIEFKDLSSNDEYIQKELDMLKELNPVFLRIEELPDDYEMDISNVTLL*
Ga0114865_11891653	3300008459	Freshwater Lake	MINFKDLQSDDPNIQEELDMLQQLNPVFLRIEELPDDYEYTTNTND*
Ga0102831_12072002	3300008996	Estuarine	RGGTLIEFKDLQSDDPNIQKELEMLQQLNPIFLRIEELPDDYEMNIDHDH*
Ga0102831_12336463	3300008996	Estuarine	MINFKDLQSDDPNIQEELDMLKELNPIFLRIEELPDDYEYTTNTND*
Ga0102864_12199351	3300009051	Estuarine	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDD
Ga0114973_106535212	3300009068	Freshwater Lake	MINFKDLQSDDPIIQGELDMLKELNPIFLRIEELPDDYEMDIEHDH*
Ga0114980_100288082	3300009152	Freshwater Lake	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMDIDHDH*
Ga0114980_104063013	3300009152	Freshwater Lake	LIEFKDLQSDDSNIQKTLEMLQELNPIFLRTEELPDDYEMDIDHDH*
Ga0114968_100979185	3300009155	Freshwater Lake	LIEFKDLQSDDSNIQKTLEMLQELNPIFLRIEELPDDYEMDIDHDH*
Ga0114977_103029023	3300009158	Freshwater Lake	LIEFKDLQSDDLNIQKTLEMLQELNPIFLRTEELPDDYEMDIDHDH*
Ga0114978_1000205720	3300009159	Freshwater Lake	LIEFKDLQSDDPIIQGELDMLKELNPIFLRIEDLPDDYEMSIDHDH*
Ga0114978_1000613710	3300009159	Freshwater Lake	MIEFKDLQSDDPIIQGKLDMLKELNPIFLRIEELPEDYEMTPYHDH*
Ga0114978_101698793	3300009159	Freshwater Lake	LIEFKDLQSDDPIIQKELEMLQQLNPIFLRIEELPNDYEMDIDHDH*
Ga0114978_101872986	3300009159	Freshwater Lake	LIEFKDLQSDDLAIQKTLEMLQELNPIFLRIEELPDDYEMDIDHDH*
Ga0114966_103179973	3300009161	Freshwater Lake	LIEFKDLQSDDLNIQKTLEMLQELNPIFLRIEELPDDYEMDIDHDH*
Ga0114970_104092804	3300009163	Freshwater Lake	LIEFKDLQSDDSNIQKTLEMLQELNPIFLRIEELPDDYEMDIDHVH*
Ga0114970_105555541	3300009163	Freshwater Lake	LIEFKDLQSDDSNIQKTLEMLQELNPIFLRIEELPNDYEMDIDHDH*
Ga0114975_102982535	3300009164	Freshwater Lake	LIEFKDLQSDDLNIQKTLEMLQELNPIFLRIEELPNDYEMDIDHDH*
Ga0114979_101979641	3300009180	Freshwater Lake	LIEFKDLQSDDLNIQKTLEMLQELNPIFLRTEELPNDYEMDIDHDH*
Ga0139557_10710903	3300011010	Freshwater	LIEFKDLQSDDPIIQLELEMLQQLNPIFLRTEELSEDYDILNDEQC*
Ga0139557_10850601	3300011010	Freshwater	LIEFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMDIDHDH*
Ga0151620_12634282	3300011268	Freshwater	MIEFKDLQSDDPNIQGELDMLKELNPVFLRIEELPDDYEMTID
Ga0153799_10416603	3300012012	Freshwater	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEIPESYYGA*
Ga0153801_10111822	3300012017	Freshwater	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMDIGHDH*
Ga0157498_10217393	3300012666	Freshwater, Surface Ice	MINFKDLQSDDPNIQEELDMLKELNPIFLRIEELPDDYEILESYYGA*
Ga0164293_100912132	3300013004	Freshwater	MIEFKDLQSDDPIIQGELDMLKELNPVFLRIEELPDDYEMTPYHDH*
Ga0164292_105324301	3300013005	Freshwater	KTAKEPRGGTLIEFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMSINHGH*
Ga0177922_101497042	3300013372	Freshwater	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMDMSNVH*
Ga0177922_104307692	3300013372	Freshwater	MINFKDLQSDDPIIQGELDMLKELNPIFLRIEELP
Ga0177922_107806971	3300013372	Freshwater	LIEFKDLQSDDPNIQKELEMLQQLNPIFLRIEELPDDYEMSIDHDH*
Ga0181364_10086765	3300017701	Freshwater Lake	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEYTTNTND
Ga0181362_10040447	3300017723	Freshwater Lake	MINFKDLQSDDPNIQEELDMLQQLNPVFLRIEELPDDYEYTT
Ga0181365_10686623	3300017736	Freshwater Lake	LIEFKDLQSDDSIIQLELEMLQQLNPIFLRTEELPEDYDIFKDKQC
Ga0181356_11028375	3300017761	Freshwater Lake	MNRIEFKDIFSDDELIQKELDMLKELNPVFLRIEELPEDYEMDNSKVDLL
Ga0181356_11046312	3300017761	Freshwater Lake	MINFKDLQSDDPNIQEELDMLKELNPIFLRIEELPDDYEILESYYGA
Ga0181358_10384661	3300017774	Freshwater Lake	LIEFKDLQSDDPNIQKELDMLQQLNPIFLRIEELPDDYEYT
Ga0181358_11797654	3300017774	Freshwater Lake	MNRIEFKDIFSDDELIQKELDMLKELNPVFLRIEELPKDYEIDISKVNLL
Ga0181349_100203410	3300017778	Freshwater Lake	MINFKDLQSDDPNIQKEIDMLKELNPIFLRIEELPDDYKMNIDHDH
Ga0181349_10672971	3300017778	Freshwater Lake	QLSYKSQRMINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMSINHGH
Ga0181348_10580361	3300017784	Freshwater Lake	MINFKDLQSDDPNIQKEIDMLKELNPIFLRIEELPDDYEYTTITND
Ga0181348_11210333	3300017784	Freshwater Lake	MINFKDLQSDDPTIQKELDMLQQLNPVFLRIEELPDDYEYTTITND
Ga0181355_10869964	3300017785	Freshwater Lake	LIEFKDLQSDDPIIQKELEMLQQLNPIFLRIEELPDDYEYTTITND
Ga0181359_10033265	3300019784	Freshwater Lake	MINFKDLQSDDPNIQEELDMLQQLNPVFLRIEELPDDYEYTTNTND
Ga0181359_10334143	3300019784	Freshwater Lake	LIEFKDLQSDDPIIQKELDMLQQLNPIFLRIEELPDDYEYTTIIND
Ga0181359_10926672	3300019784	Freshwater Lake	MINFKDLQSDDPNIQKEIDMLKELNPIFLRIEELPDDYKMDIDHDH
Ga0181359_10961483	3300019784	Freshwater Lake	LIEFKDLQSDDPIIQLELEMLQQLNPIFLRTEELPEDYDILKDKQC
Ga0181359_11613662	3300019784	Freshwater Lake	MIEFKVLSSNEEHIQKELDMLKELNPVFLRIEELPEDYEMDNSKVDLL
Ga0211736_101139512	3300020151	Freshwater	LIEFKDLQSDDPIIQGELDMLKELNPIFLRIEDLPDDYEMSIDHDH
Ga0211736_102129313	3300020151	Freshwater	DDPIIQGELDMLKELNPIFLRIEELPGDYEMPKEYNHGH
Ga0211734_100063623	3300020159	Freshwater	MIEFKDLQSDDPIIQGELDMLKELNPIFLRIEDLPDDYEMIPHHDH
Ga0211734_105247072	3300020159	Freshwater	MIEFKDLQSDDPIIQGELDMLKELNPIFLRIEDLPDDYEMMPHHDH
Ga0211726_105537692	3300020161	Freshwater	MINFKDLVSDDEHIQRELDMLKELNPIFLRIEELPDDYEMPKEYGPWTLM
Ga0211726_108837387	3300020161	Freshwater	VTEFKDLVSDDEHIQRELDMLKELNPIFLRIEELPDDYEMPKEYGPW
Ga0211726_109976903	3300020161	Freshwater	MIEFKDLQSDDPDIQGELDMLKELNPIFLRIEDLPDDYEMSIDHDH
Ga0211726_110140894	3300020161	Freshwater	LIEFKDLQSDDPDIQGELDMLKELNPIFLRIEELPDDYEMPESYYGA
Ga0211735_107278373	3300020162	Freshwater	LIEFKDLQSDDLAIQKTLEMLQELNPIFLRIEELPDDEMDIDHGH
Ga0211729_102341263	3300020172	Freshwater	MINFKDLVSDDEHIQRELDMLKELNPIFLRIEELPEDYEMPEEYNHGH
Ga0211729_108613393	3300020172	Freshwater	LIEFKDLQSDDPIIQGELDMLKELNPIFLRIEELPDDYEMMPHHDH
Ga0211731_108773474	3300020205	Freshwater	LIEFKDLQSDDPIIQGELDMLKELNPIFLRIEDLPDDYEMDMSNVH
Ga0181354_12104604	3300022190	Freshwater Lake	MNRIEFKDIFSDDELIQKELDMLKELNPVFLRIEELPKDYEI
Ga0181354_12125833	3300022190	Freshwater Lake	LIEFKDLQSDDPIIQKELDMLQQLNPIFLRIEELPDDYEYTTNTND
Ga0181351_11394611	3300022407	Freshwater Lake	LIEFKDLQSDDPNIQKELDMLQQLNPIFLRIEELPDDYE
Ga0181351_12558741	3300022407	Freshwater Lake	LIEFKDLQSDDPIIQKELEMLQQLNPIFLRIEELPDDYEMFGDEK
Ga0181351_12726713	3300022407	Freshwater Lake	QEKMINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMSINHGH
Ga0214921_1000275040	3300023174	Freshwater	LIEFKDLQSDDLNIQKTLEMLQELNPIFLRIEELPNDYEMDIDHDH
Ga0214921_1001333819	3300023174	Freshwater	MKHQKMIEFKDLQSDDPIIQGELDMLKELNPIFLRTEELPDDYEMTPHHDH
Ga0214923_102212342	3300023179	Freshwater	LIEFKDLQSDDLNIQKTLEMLQELNPIFLRIEELPNDYEMDIDHEH
Ga0244775_112966492	3300024346	Estuarine	MINFKDLQSDDPNIQEELDMLKELNPIFLRIEELPDDYEIPEFYYGA
Ga0208974_11019223	3300027608	Freshwater Lentic	MINFKDLQSDDPNIQEELDMLKELNPIFLRIEELPDDYEIPESYYGA
Ga0208133_10231143	3300027631	Estuarine	LIEFKDLQSDDSNIQKTLEMLQELNPIFLRTEELPNDYEMDIDHDH
Ga0209296_11608815	3300027759	Freshwater Lake	LIEFKDLQSDDLNIQKTLEMLQELNPIFLRTEELPNDYEMDIDHDH
Ga0209088_100529952	3300027763	Freshwater Lake	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMDIDHDH
Ga0209500_100148063	3300027782	Freshwater Lake	MIEFKDLQSDDPIIQGKLDMLKELNPIFLRIEELPEDYEMTPYHDH
Ga0209500_102447994	3300027782	Freshwater Lake	LIEFKDLQSDDLAIQKTLEMLQELNPIFLRIEELPDDYEMDIDHDH
Ga0209353_101389423	3300027798	Freshwater Lake	LIEFKDLQSDDPIIQLELEMLQQLNPIFLRTEELPEDYDILKDEQC
Ga0209353_103983271	3300027798	Freshwater Lake	LIEFKDLQSDDPNIQGELDMLQQLNPVFLRIEELPDDYEYTTNTND
Ga0209400_10659282	3300027963	Freshwater Lake	LIEFKDLQSDDSNIQKTLEMLQELNPIFLRIEELPDDYEMDIDHDH
Ga0304730_11188805	3300028394	Freshwater Lake	LIEFKDLQSDDSNIQKTLEMLQELNPIFLRIEELPNDYEMDIDHDH
Ga0315900_101016381	3300031787	Freshwater	DLQSDDPIIQGELDMLKELNPIFLRIEDLPDDYEMPKEYNHGH
Ga0315909_106132972	3300031857	Freshwater	MIEFKDLQSDDPIIQGELDMLKELNPIFLRIEDLPDDYEMPKEYNHGH
Ga0334979_0000284_3606_3746	3300033996	Freshwater	MIEFKDLQSDDPIIQGELDMLKELNPVFLRIEELPDDYEMTPYHDH
Ga0334979_0034415_1770_1910	3300033996	Freshwater	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMDIGHDH
Ga0334990_0132496_3_107	3300034068	Freshwater	MIEFKDLQSDDPIIQGELDMLKELNPVFLRIEELP
Ga0335020_0403875_3_110	3300034082	Freshwater	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPD
Ga0335031_0194091_397_537	3300034104	Freshwater	MINFKDLQSDDPNIQGELDMLKELNPIFLRIEELPDDYEMSINHGH
Ga0335033_0164659_445_585	3300034117	Freshwater	MINFKDLQSDDPNIQGELDMLKELNPVFLRIEELPDDYEMDIDHDH
Ga0335054_0324394_499_639	3300034119	Freshwater	MINFKDLQSDDPIIQGELDMLKELNPTFLRIEELPDDYEMDIGHDH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101164

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences