Metagenome / Metatranscriptome Family F101169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101169
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	80 residues
Representative Sequence	MKQQLIFLNFWECKQLEYWLEDNFPDCRIRSLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYGQN
Number of Associated Samples	46
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.55 %
% of genes near scaffold ends (potentially truncated)	15.69 %
% of genes from short scaffolds (< 2000 bps)	59.80 %
Associated GOLD sequencing projects	37
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.588 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (54.902 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (60.784 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.17% β-sheet: 14.95% Coil/Unstructured: 58.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.19.1: Bacterial exopeptidase dimerisation domain	d1z2la2	1z2l	0.66125
d.58.5.0: automated matches	d4iyqa1	4iyq	0.65405
d.58.5.2: Divalent ion tolerance proteins CutA (CutA1)	d1ukua_	1uku	0.65249
d.58.27.1: Translational regulator protein regA	d1regx_	1reg	0.63403
d.58.5.2: Divalent ion tolerance proteins CutA (CutA1)	d3opka_	3opk	0.63232

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13394	Fer4_14	31.37
PF01230	HIT	6.86
PF01227	GTP_cyclohydroI	5.88
PF02773	S-AdoMet_synt_C	4.90
PF03721	UDPG_MGDP_dh_N	2.94
PF07460	NUMOD3	1.96
PF09834	DUF2061	1.96
PF02739	5_3_exonuc_N	1.96
PF05721	PhyH	1.96
PF02772	S-AdoMet_synt_M	0.98
PF04055	Radical_SAM	0.98
PF12680	SnoaL_2	0.98
PF01636	APH	0.98
PF13759	2OG-FeII_Oxy_5	0.98
PF01467	CTP_transf_like	0.98
PF00156	Pribosyltran	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	5.88
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.94
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	2.94
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	2.94
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	2.94
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	2.94
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	1.96
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
All Organisms	root	All Organisms	29.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Viruses	superkingdom	All Organisms → Viruses	24.51 %
cellular organisms	root	All Organisms → cellular organisms	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	9.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	9.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	9.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9.80 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	9.80 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.71 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.80 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.98 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10000016	Not Available	46273	Open in IMG/M
3300003277\|JGI25908J49247_10121360	Not Available	619	Open in IMG/M
3300003430\|JGI25921J50272_10091341	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	650	Open in IMG/M
3300004112\|Ga0065166_10056018	All Organisms → Viruses → Predicted Viral	1325	Open in IMG/M
3300004125\|Ga0066182_10138499	Not Available	598	Open in IMG/M
3300005662\|Ga0078894_10034067	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4219	Open in IMG/M
3300005662\|Ga0078894_10103683	All Organisms → cellular organisms → Bacteria → Proteobacteria	2513	Open in IMG/M
3300005662\|Ga0078894_10208674	All Organisms → Viruses → Predicted Viral	1769	Open in IMG/M
3300005662\|Ga0078894_10231550	Not Available	1674	Open in IMG/M
3300005662\|Ga0078894_10460828	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1144	Open in IMG/M
3300005662\|Ga0078894_11408915	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	582	Open in IMG/M
3300005662\|Ga0078894_11748231	Not Available	509	Open in IMG/M
3300005758\|Ga0078117_1007079	All Organisms → Viruses → Predicted Viral	2949	Open in IMG/M
3300005758\|Ga0078117_1009676	Not Available	27621	Open in IMG/M
3300006037\|Ga0075465_10149772	Not Available	531	Open in IMG/M
3300006484\|Ga0070744_10003768	Not Available	4554	Open in IMG/M
3300006484\|Ga0070744_10010318	All Organisms → Viruses → Predicted Viral	2770	Open in IMG/M
3300006484\|Ga0070744_10025330	All Organisms → Viruses → Predicted Viral	1758	Open in IMG/M
3300006484\|Ga0070744_10029451	Not Available	1625	Open in IMG/M
3300006484\|Ga0070744_10060727	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1103	Open in IMG/M
3300006484\|Ga0070744_10070293	Not Available	1017	Open in IMG/M
3300006484\|Ga0070744_10075426	Not Available	979	Open in IMG/M
3300006484\|Ga0070744_10185984	Not Available	592	Open in IMG/M
3300006805\|Ga0075464_10722497	Not Available	617	Open in IMG/M
3300007555\|Ga0102817_1138689	Not Available	542	Open in IMG/M
3300007559\|Ga0102828_1039065	Not Available	1082	Open in IMG/M
3300007559\|Ga0102828_1107508	Not Available	682	Open in IMG/M
3300007559\|Ga0102828_1112128	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	668	Open in IMG/M
3300007590\|Ga0102917_1196411	Not Available	705	Open in IMG/M
3300007708\|Ga0102859_1020774	Not Available	1712	Open in IMG/M
3300009026\|Ga0102829_1070225	Not Available	1069	Open in IMG/M
3300009026\|Ga0102829_1095381	Not Available	925	Open in IMG/M
3300009026\|Ga0102829_1168841	Not Available	704	Open in IMG/M
3300009026\|Ga0102829_1343270	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	502	Open in IMG/M
3300009151\|Ga0114962_10010189	Not Available	6970	Open in IMG/M
3300009155\|Ga0114968_10054477	Not Available	2564	Open in IMG/M
3300009155\|Ga0114968_10289999	Not Available	918	Open in IMG/M
3300009164\|Ga0114975_10000521	Not Available	29171	Open in IMG/M
3300009164\|Ga0114975_10001507	Not Available	16556	Open in IMG/M
3300009164\|Ga0114975_10004293	Not Available	9344	Open in IMG/M
3300009164\|Ga0114975_10013792	All Organisms → Viruses → Predicted Viral	4983	Open in IMG/M
3300009164\|Ga0114975_10083314	Not Available	1859	Open in IMG/M
3300009164\|Ga0114975_10085829	Not Available	1830	Open in IMG/M
3300009164\|Ga0114975_10380244	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	773	Open in IMG/M
3300009180\|Ga0114979_10000188	Not Available	40322	Open in IMG/M
3300009180\|Ga0114979_10002947	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11454	Open in IMG/M
3300009180\|Ga0114979_10019981	All Organisms → Viruses → Predicted Viral	4278	Open in IMG/M
3300009180\|Ga0114979_10072415	All Organisms → Viruses → Predicted Viral	2146	Open in IMG/M
3300009180\|Ga0114979_10245532	Not Available	1074	Open in IMG/M
3300009180\|Ga0114979_10257658	Not Available	1044	Open in IMG/M
3300009180\|Ga0114979_10425236	Not Available	775	Open in IMG/M
3300010160\|Ga0114967_10629661	Not Available	513	Open in IMG/M
3300010354\|Ga0129333_11362423	Not Available	584	Open in IMG/M
3300010885\|Ga0133913_12038134	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300012346\|Ga0157141_1001895	Not Available	4383	Open in IMG/M
3300012348\|Ga0157140_10001744	Not Available	2507	Open in IMG/M
3300012348\|Ga0157140_10004687	Not Available	1463	Open in IMG/M
3300012352\|Ga0157138_1000793	Not Available	6020	Open in IMG/M
3300012352\|Ga0157138_1005948	Not Available	2038	Open in IMG/M
3300012664\|Ga0157497_1004672	Not Available	2199	Open in IMG/M
3300012779\|Ga0138284_1058107	Not Available	587	Open in IMG/M
3300017761\|Ga0181356_1116241	Not Available	858	Open in IMG/M
3300017766\|Ga0181343_1135349	Not Available	689	Open in IMG/M
3300019784\|Ga0181359_1100858	Not Available	1059	Open in IMG/M
3300020160\|Ga0211733_10473982	Not Available	539	Open in IMG/M
3300021963\|Ga0222712_10027124	All Organisms → Viruses → Predicted Viral	4612	Open in IMG/M
3300021963\|Ga0222712_10077087	Not Available	2393	Open in IMG/M
3300021963\|Ga0222712_10388650	Not Available	851	Open in IMG/M
3300024346\|Ga0244775_10010102	Not Available	9008	Open in IMG/M
3300024346\|Ga0244775_10010670	Not Available	8750	Open in IMG/M
3300024346\|Ga0244775_10025982	Not Available	5249	Open in IMG/M
3300024346\|Ga0244775_10083046	Not Available	2735	Open in IMG/M
3300024346\|Ga0244775_10165469	All Organisms → Viruses → Predicted Viral	1863	Open in IMG/M
3300024346\|Ga0244775_10498086	Not Available	995	Open in IMG/M
3300024346\|Ga0244775_10745873	Not Available	786	Open in IMG/M
3300024346\|Ga0244775_11002182	Not Available	659	Open in IMG/M
3300025896\|Ga0208916_10054113	All Organisms → Viruses → Predicted Viral	1651	Open in IMG/M
3300025896\|Ga0208916_10381131	Not Available	615	Open in IMG/M
3300027320\|Ga0208923_1023487	Not Available	1093	Open in IMG/M
3300027581\|Ga0209651_1192789	Not Available	535	Open in IMG/M
3300027631\|Ga0208133_1005500	Not Available	3744	Open in IMG/M
3300027631\|Ga0208133_1008976	All Organisms → Viruses → Predicted Viral	2788	Open in IMG/M
3300027644\|Ga0209356_1002849	Not Available	6637	Open in IMG/M
3300027679\|Ga0209769_1272722	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300027710\|Ga0209599_10015208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	2244	Open in IMG/M
3300027749\|Ga0209084_1040105	All Organisms → Viruses → Predicted Viral	2328	Open in IMG/M
3300027763\|Ga0209088_10000127	Not Available	56122	Open in IMG/M
3300027763\|Ga0209088_10000988	Not Available	19051	Open in IMG/M
3300027763\|Ga0209088_10012685	Not Available	4500	Open in IMG/M
3300027763\|Ga0209088_10028196	All Organisms → Viruses → Predicted Viral	2847	Open in IMG/M
3300027763\|Ga0209088_10116964	Not Available	1207	Open in IMG/M
3300027763\|Ga0209088_10118592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1197	Open in IMG/M
3300027763\|Ga0209088_10149023	Not Available	1035	Open in IMG/M
3300027797\|Ga0209107_10200155	Not Available	986	Open in IMG/M
3300027963\|Ga0209400_1312247	Not Available	597	Open in IMG/M
3300027969\|Ga0209191_1000022	Not Available	127886	Open in IMG/M
3300027969\|Ga0209191_1000058	Not Available	90493	Open in IMG/M
3300027969\|Ga0209191_1005754	Not Available	6972	Open in IMG/M
3300027969\|Ga0209191_1207198	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	768	Open in IMG/M
3300027969\|Ga0209191_1239408	Not Available	696	Open in IMG/M
3300034050\|Ga0335023_0047346	All Organisms → Viruses → Predicted Viral	2515	Open in IMG/M
3300034060\|Ga0334983_0192879	Not Available	1268	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.02%
Terrestrial	Environmental → Terrestrial	0.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	62.75%
Marine	Environmental → Aquatic → Marine	36.27%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.98%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	38.24%
Unclassified	Environmental → Aquatic → Marine → Unclassified	20.59%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.63%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.78%
Lotic	Environmental → Aquatic → Freshwater → Lotic	5.88%
Coastal	Environmental → Aquatic → Marine → Coastal	4.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	38.24%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	20.59%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	17.65%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	10.78%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.90%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.98%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	33.33%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	17.65%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	17.65%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	10.78%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	5.88%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.92%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.96%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	1.96%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.98%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.98%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004125	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300006037	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012346	Freshwater microbial communities from Emily Creek, Ontario, Canada - S29	Environmental	Open in IMG/M
3300012348	Freshwater microbial communities from Coldwater Creek, Ontario, Canada - S44	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012664	Freshwater microbial communities from Zephyr Creek, Ontario, Canada - S17	Environmental	Open in IMG/M
3300012779	Freshwater microbial communities from Lake Simoncouche, Canada - S_130206_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_1000001662	3300003277	Freshwater Lake	MKTQQLISLNFWESKQLEYWLADNFPDCRVRCLYDTWSGHPEVVEWYAIEGDIPLDMECLLKLKYGDKLKSSNAGIRHG*
JGI25908J49247_101213602	3300003277	Freshwater Lake	MGQPRQLIYLNFWECKQLEYWLKDNFPQCVLTSLYDKWNEPEAEDWYAIDGEIPLDALCLMKLKYGNKLKG*
JGI25921J50272_100913411	3300003430	Freshwater Lake	MKQQLIFLNFWECKQLEYWIEDNFPDCRIRSLYDNWTAPEESEWYAIEGDITLDMELLLKLKYGNKLKGSNTGIKYGQN*
Ga0065166_100560181	3300004112	Freshwater Lake	MGKSQQLIFLNFWEHKQLEYWLEDNFPDCRIRSLYDTWTAPDEPEWYAIEGEITLDMECLLKLKYGNKLKNSNAGIRHG*
Ga0066182_101384992	3300004125	Freshwater Lake	MPSFKGQQLISLNFWECKQLEYWLADNFPECTIRSLYDTWSNPEEEEWYAIEGDITLDMELLLKLKYGNKLKDSNAGIRYGQN*
Ga0078894_100340676	3300005662	Freshwater Lake	MKSQQLISLNFWECKQLEYWLKDNFPACTIRSLYDKFTSPEEEDWYAIEGDISVDMELLLKLKYGNKLKGSNAGIR*
Ga0078894_101036835	3300005662	Freshwater Lake	MKQQLIFLNFWECKQLEYWLEDNFPDCRIRSLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYGQN*
Ga0078894_102086742	3300005662	Freshwater Lake	MPSFKGQQLISLNFWEYKQLEYWLADNFPECTIRSLYDTWSNPDQEEWYAVEGNITLDMECLLKLKYGNKLKSSNAGIRHGQN*
Ga0078894_102315503	3300005662	Freshwater Lake	MKLFLNFWESKQLEYWLADNYPELKIRSLYDNYKSPEEEDWYAIEGNIDIDTECLIKLKYGNKVTISNAGIRHG*
Ga0078894_104608284	3300005662	Freshwater Lake	MKVQQLISLNFWESKQLEYWLADNFPDCRIRCLYDTWSDPEKEEWYVIEGDIPLDMEYLLKLKYGNKLKGSNAGIKYGQN*
Ga0078894_114089152	3300005662	Freshwater Lake	MKHQQLISLNFWECKQLEYWLKDNFPECSIRSIYDKFTSPEEEDWYAIEGDISVDMECLLKLKYGDKLKSSNAGLRHG*
Ga0078894_117482312	3300005662	Freshwater Lake	MKRQQLIFLNFWECKQLEYWLADNFPKCRIRSLYDKWTSPEEEDWYSIEGDITLDMELLLKLKYGNKLKGSNAGIRHGQN*
Ga0078117_10070793	3300005758	Lake Water	MITQIVVVLNFWEAKQLEYWLKDNYPELTLRSLYDKYTSPEEDDWYAIEGNIAVDVECLIKLKYGNKIKERPRKVTHG*
Ga0078117_100967613	3300005758	Lake Water	MVSQIKVLLTFWEAKQLEYWLKDNYEDLSIRPLYDTWSDPSEEEWYAVEGNIDIDTECLIKLKYGDKIKTSNAGIRYG*
Ga0075465_101497722	3300006037	Aqueous	TIPRQLISLNFWECKQLEYWLKDNFPECSLTSLYDKWNEPEAEDWYAIDGEIPLDALCLLKLKYGNKFKG*
Ga0070744_100037682	3300006484	Estuarine	MPTVKSQQLIFLNFWECKQLEYWIEDNFPDCRIRSLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNVGIRYGQN*
Ga0070744_100103185	3300006484	Estuarine	MKVTKRQQLIFLNFWERKQLEYWIKDNYPDCYIRSLYDTWVEPEDEEWYAIEGNITLDMECLLKLKYGNKLKNSNAGIRYGQN*
Ga0070744_100253304	3300006484	Estuarine	FWEFKQLEYWLEDNYPDCRIRSLYDTWTAPEESEWYAIEGDISLDMECLLKLKYGSKLKNSNAGIRYGQN*
Ga0070744_100294512	3300006484	Estuarine	MPLVKSQQLISLNFWEYKQLEYWLADNFPECTIRSLYDIWSNPDQEEWYAIEGEITIDIECLLKLKYGNKLKSSNAGYYKYGKN*
Ga0070744_100607273	3300006484	Estuarine	MPSIKGQQLISLNFWEYKQLEYWLADNFPECTIRSLYDTWSNPDQEDWYAVEGNITLDMECLLKLKYGNKLKSSNAGIKHGQN*
Ga0070744_100702933	3300006484	Estuarine	MPAVKSQQLIFLNFWECKQLEYWIEDNFPDCRLRSLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYGQN*
Ga0070744_100754262	3300006484	Estuarine	MPTVKHQQLIFLNFWEYKQLEYWLEDNFSDCRIRSLYDNWSSPEESEWYAIEGNITVDMECLLKLKYGSKLKNSNAGIRYGQN*
Ga0070744_101859842	3300006484	Estuarine	MSLVKHQQLIFLNFWECKQLEYWLEDNFSDCTIRSLYDTWSSPEESEWYAIEGNITLDMECLLKLKYGNKLKDSNAGKRYGQN*
Ga0075464_107224972	3300006805	Aqueous	MTIPRQLISLNFWECKQLEYWLKDNFPECSLTSLYDKWNEPEAEDWYAIDGEIPLDALCLLKLKYGNKFKG*
Ga0102817_11386891	3300007555	Estuarine	TQQMKNQQLIFLNFWESKQLEYWLEDNFPDCRIRSLYDTWTAPEDSEWYAVEGNITLDLECLLKLKYSDRLKNSNAGIRHGQN*
Ga0102828_10390651	3300007559	Estuarine	QQLIFLNFWECKQLEYWIEDNFPDCRLRSLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYGQN*
Ga0102828_11075081	3300007559	Estuarine	MSLVKHQQLIFLNFWECKQLEYWLEDNFSDCTIRSLYDTWSSPEESEWYAIEGNITLDMECLLKLKYGNKLKGSNAGIRHGQN*
Ga0102828_11121282	3300007559	Estuarine	MPSIKGQQLISLNFWEYKQLEYWLADNFPECTIRSLYDTWSNPDQEDWYAVEGNITLDMECLLKLKYGNRLKSSNAGIRHGQN*
Ga0102917_11964112	3300007590	Estuarine	MKNQQLIYLNFWECKQLEYWLKDNFPECTIRSLYDKFTDPEEEDWYAIEGNISVDMELLLKLKYGNKLKGSRAGIRYGQN*
Ga0102859_10207743	3300007708	Estuarine	MKNQQLIFLNFWESKQLEYWLEDNFPDCRIRSLYDTWTAPEDSEWYAVEGNITLDLECLLKLKYSDRLKNSNAGIRHGQN*
Ga0102829_10702252	3300009026	Estuarine	MPTVKGQQLIFLNFWEFKQLEYWLEDNYPDCRIRSLYDTWTAPEESEWYAIEGDISLDMECLLKLKYGSKLKNSNAGIRYGQN*
Ga0102829_10953811	3300009026	Estuarine	MKTQQLIFLNFWESKQLEYWLEDNFPDCRIRSLYDTLTAPEDSVWYTVEGNISLDLECLLKLKYSDRLENSNAGIRHGQN*
Ga0102829_11688411	3300009026	Estuarine	KNQQLIFLNFWESKQLEYWLEDNFPDCRIRSLYDTWTAPEDSEWYAVEGNISLDLECLLKLKYSDRLKNSNAGIRHGQN*
Ga0102829_13432702	3300009026	Estuarine	MSGIKHQQLISLNFWEYKQLEYWLADNFPGCTIRSLYDTWSNPDQEDWYAVEGNITLDMECLLKLKYGNKLKSSNAGIKHGQN*
Ga0114962_1001018915	3300009151	Freshwater Lake	MKSQQLIYLNFWEYKQLEYWLKDNFSNCTIQSMYDKFSDPEESDWYKIEGDITVDLECLLVLKYGNKLKGHTSGLNYG*
Ga0114968_100544772	3300009155	Freshwater Lake	MNQQKLIFLNFWECKQLEYWIEDNFPDCRIRSLYDTWTAPEELEWYAIEGNITLDMELLLKLKYGNKLKGSNTGIKYGQN*
Ga0114968_102899992	3300009155	Freshwater Lake	MGKTQQLISLNCWERKQLEYWLVDNFPECTIRSLYDKWSSPEEEECYAIEGDITLDMECLLKLKYGNRLKDSNAGIRYG*
Ga0114975_1000052124	3300009164	Freshwater Lake	MGKSQQLISLNFWESKQLEYWIEDNFPDCRVRCLYDTWSDPEQKEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYG*
Ga0114975_1000150723	3300009164	Freshwater Lake	MKNQQLISLNFWESKQLEYWLEDNFPDCRIRSLYDTWTAPEDSELYAIEGNITLDLECLLKLKYSDRLKNSNAGIRHGQN*
Ga0114975_100042935	3300009164	Freshwater Lake	MVSQIKVFLNFWEYKQLEYWLADNFPECTVRTLYDTWSNPEDQDWYAVEGNIDVDTECLIKLKYGNKVTISNAGMRHG*
Ga0114975_100137928	3300009164	Freshwater Lake	MGKSQQLISLNFWECKQLEYWLADNFPECTIRSLYDKWTGPEEEDWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRHG*
Ga0114975_100833145	3300009164	Freshwater Lake	MPSIKGQQLISLNFWEYKQLEYWLSDNFPECTIRSLYDTWSNPDQEDWYAVEGNITVDIECLLKLKYGNKLKSSNAGIRYGQN*
Ga0114975_100858292	3300009164	Freshwater Lake	MPAVKHQQLIFLNFWERKQLEYWLSDNFPRCTIRNLYDTWSSPEELEWYAIEGDITVDMECLLKLKYGNKLKVSNAGIRHGQN*
Ga0114975_103802443	3300009164	Freshwater Lake	MPSFKGQQLISLNFWECKQLEYWLADNFPECTIRSLYDTWSNPEEEEWYAIEGDITLDMELLLKLKYGNKLKGSNAGIRYGQN*
Ga0114979_1000018810	3300009180	Freshwater Lake	MPGVKNQQLIFLNFWERKQLEYWLADNFSDCTIRNIYDTWSSPEEQEWYAIEGNITLDMECLLKLKYGNRLKDSNAGIRHGQN*
Ga0114979_1000294723	3300009180	Freshwater Lake	MPAVKHQQLIFLNFWERKQLEYWLSDNFPRCTIRNLYDTWSSPEELEWYAIEGDITVDMECLLKLKYGNKLKSSNAGIRWTKLK*
Ga0114979_100199817	3300009180	Freshwater Lake	MPSIKGQQLISLNFWEYKQLEYWLSDNFPECTIRSLYDTWSNPDQEDWYAVEGNITLDIECLLKLKYGNKLKSSNAGIRYGQN*
Ga0114979_100724152	3300009180	Freshwater Lake	MGKSQQLISLNFWESKQLEYWIEDNFPDCRVRCLYDTWNDPEQEEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYG*
Ga0114979_102455322	3300009180	Freshwater Lake	MPTVKGQQLIFLNFWECKQLEYWIEDNFPDCRIRTLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYGQN*
Ga0114979_102576582	3300009180	Freshwater Lake	MKTQQLISLNFWESKQLEYWLSDNFPDCRVRCLYDTWSDPEQEDWYAIEGNIPLDMECLLKLKYGNKLKGSNAGIRHG*
Ga0114979_104252361	3300009180	Freshwater Lake	MKTQQLIFLNFWESKQLEYWLSDNFPDCRLRCLYDTWSDPEQEEWYAIDGDIPLDMECLLKLKYGNKLKGSNAGIRYGQN*
Ga0114967_106296612	3300010160	Freshwater Lake	MGKTQQLISLNFWERKQLEYWLVDNFPECTIRSLYDKWSSPEEEECYAIEGDITLDMECLLKLKYGNRLKDSNAGIRYG*
Ga0129333_113624231	3300010354	Freshwater To Marine Saline Gradient	LNFWECKQLEYWLKDNFPDCTIRSLYDKFTSPEEEDLYAIEGDITVDMELLLKLKYGDKLKNSNAGIRHG*
Ga0133913_120381341	3300010885	Freshwater Lake	AVKHQQLIFLNFWERKQLEYWLSDNFPRCTIRNLYDTWSSPEELEWYAIEGDITVDMECLLKLKYGNKLKVSNAGIRHGQN*
Ga0157141_10018956	3300012346	Freshwater	MPSIKGQQLISLNFWEYKQLEYWLADNFPECTIRSLYDTWSNPDQEDWYAVEGNITLDMECLLKLKYGNKLKSSNAGIKHG*
Ga0157140_100017445	3300012348	Freshwater	MPSFKGQQLISLNFWEYKQLEYWLADNFPECTIRSLYDTWSNPDQEEWYAVEGNITLDMECLLKLKYGNKLKSSNAGIRYGQN*
Ga0157140_100046874	3300012348	Freshwater	MPSIKGQQLISLNFWEYKQLEYWLTDNFPECTIRSLYDTWSNPDQEDWYAVEGNITLDMECLLKLKYGNKLKSSNAGIKHGQN*
Ga0157138_10007931	3300012352	Freshwater	MPSVKHQQLIFLNFWEYKQLEYWIEDNYPDCRIRSLYDTWTAPEEAEWYAIEGNITLDMECLLKLKYGNKLKSSNAGIRYGQN*
Ga0157138_10059481	3300012352	Freshwater	MVSQIKVFLNFWEYKQLEYWLADNFPECTVRTLYDTWSNPEDQDWYAIEGNIDVDTECLIKLKYGNKVTISNAGMRHG*
Ga0157497_10046726	3300012664	Freshwater	MPSIKGQQLISLNFWEYKQLEYWLADNFPECTIRSLYDTWSNPDQEDWYAVEGNITLDIECLLKLKYGNKLKSSNAGIRHGQN*
Ga0138284_10581072	3300012779	Freshwater Lake	MKNQQLISLNFWESKQLEYWLEDNFPDCRIRSLYDTWTAPEDSELYAIEGNITLDLECLLKLKYSDRLKNSNA
Ga0181356_11162412	3300017761	Freshwater Lake	MPSIKGQQLISLNFWEYKQLEYWLTDNFPECTIRSLYDTWSNPDQEDWYAVEGNITVDIECLLKLKYGNKLKSSNAGIKYGQN
Ga0181343_11353492	3300017766	Freshwater Lake	MKQQLIFLNFWECKQLEYWLEDNFPDCRIRSLYDNWTAPEESEWYAIEGDITLDMELLLKLKYGNKLKGSNTGIKYGQN
Ga0181359_11008582	3300019784	Freshwater Lake	MPSIKGQQLISLNFWEYKQLEYWLTDNFPECTIRSLYDTWSNPDQEDWYAVEGNITLDIECLLKLKYGNKLKSSNAGIKYGQN
Ga0211733_104739821	3300020160	Freshwater	LIYLNFWECKQLEYWLKDNFPECTIRSLYDKFTDPEEEDWYAIEGNISVDMELLLKLKYGNKLKGSGAGIRYGQN
Ga0222712_100271244	3300021963	Estuarine Water	MVSQIKVFLNFWEYKQLEYWLADNFPECNVRTLYDTWSNPEDQDWYAIEGNIDVDTECLIKLKYGNKVKISNAGMRHG
Ga0222712_100770874	3300021963	Estuarine Water	MPSVKGQQLIALNFWEYKQLEYWLADNFPECTIRSVYDTWSNPDQEDWYAVEGNITVDMECLLKLKYGNKLKSSNAGIRYGQN
Ga0222712_103886503	3300021963	Estuarine Water	MGKPQQLISLNFWECKQLEYWLADNFPECTIRSLYDTWSNPEEEEWYAIEGDITLDMELLLKLKYGNKLKGSNAGIRYG
Ga0244775_1001010212	3300024346	Estuarine	MPTVKSQQLIFLNFWECKQLEYWIEDNFPDCRIRSLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNVGIRYGQN
Ga0244775_1001067011	3300024346	Estuarine	MSLVKHQQLIFLNFWECKQLEYWLEDNFSDCTIRSLYDTWSSPEESEWYAIEGNITLDMECLLKLKYGNKLKDSNAGKRYGQN
Ga0244775_100259828	3300024346	Estuarine	MPTVKGQQLIFLNFWEFKQLEYWLEDNYPDCRIRSLYDTWTAPEESEWYAIEGDISLDMECLLKLKYGSKLKNSNAGIRYGQN
Ga0244775_100830464	3300024346	Estuarine	MPAVKSQQLIFLNFWECKQLEYWIEDNFPDCRLRSLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYGQN
Ga0244775_101654692	3300024346	Estuarine	MPSIKGQQLISLNFWEYKQLEYWLADNFPECTIRSLYDTWSNPDQEDWYAVEGNITLDMECLLKLKYGNKLKSSNAGIKHGQN
Ga0244775_104980863	3300024346	Estuarine	VITQQMKNQQLIFLNFWESKQLEYWLEDNFPDCRIRSLYDTWTAPEDSEWYAVEGNITLDLECLLKLKYSDRLKNSNAGIRHGQN
Ga0244775_107458732	3300024346	Estuarine	NMKVTKSQQLIFLNFWERKQLEYWIKDNYPDCYIRSLYDTWVEPEDEEWYAIEGNITLDMECLLKLKYGNKLKNSNAGIRYGQN
Ga0244775_110021822	3300024346	Estuarine	MPTVKGQQLIFLNFWECKQLEYWIEDNFPDCRIRSLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYGKN
Ga0208916_100541134	3300025896	Aqueous	MGQPRQLIYLNFWECKQLEYWLKDNFPQCVLTSLYDKWNEPEAEDWYAIDGEIPLDALCLMKLKYGNKLKG
Ga0208916_103811312	3300025896	Aqueous	MTIPRQLISLNFWECKQLEYWLKDNFPECSLTSLYDKWNEPEAEDWYAIDGEIPLDALCLLKLKYGNKFKG
Ga0208923_10234872	3300027320	Estuarine	VITQQMKNQQLIFLNFWESKQLEYWLEDNFPDCRIRSLYDTWTAPEDSEWYAVEGNISLDLECLLKLKYSDRLKNSNAGIRHGQN
Ga0209651_11927892	3300027581	Freshwater Lake	QSKMPSIKGQQLISLNFWEYKQLEYWLTDNFPECTIRSLYDTWSNPDQEDWYAVEGNITLDIECLLKLKYGNKLKSSNAGIKYGQN
Ga0208133_10055007	3300027631	Estuarine	MKVTKRQQLIFLNFWERKQLEYWIKDNYPDCYIRSLYDTWVEPEDEEWYAIEGNITLDMECLLKLKYGNKLKNSNAGIRYGQN
Ga0208133_10089761	3300027631	Estuarine	FWEFKQLEYWLEDNYPDCRIRSLYDTWTAPEESEWYAIEGDISLDMECLLKLKYGSKLKNSNAGIRYGQN
Ga0209356_10028494	3300027644	Freshwater Lake	MPSIKGQQLISLNFWEYKQLEYWLTDNFPECTIRSLYDTWSNPDQEDWYAVEGNITVDIECLLKLKYGNKLKSSNAGIRYGQN
Ga0209769_12727222	3300027679	Freshwater Lake	MKTQQLISLNFWESKQLEYWLADNFPDCRVRCLYDTWSGHPEVVEWYAIEGDIPLDMECLLKLKYGDKLKSSNAGIRHG
Ga0209599_100152083	3300027710	Deep Subsurface	MKLFLNFWESKQLEYWLADNYPELKIRSLYDNYKSPEEEDWYAIEGNIDIDTECLIKLKYGNKVTISNAGIRHG
Ga0209084_10401054	3300027749	Freshwater Lake	MKSQQLIYLNFWEYKQLEYWLKDNFSNCTIQSMYDKFSDPEESDWYKIEGDITVDLECLLVLKYGNKLKGHTSGLNYG
Ga0209088_1000012710	3300027763	Freshwater Lake	MPGVKNQQLIFLNFWERKQLEYWLADNFSDCTIRNIYDTWSSPEEQEWYAIEGNITLDMECLLKLKYGNRLKDSNAGIRHGQN
Ga0209088_1000098829	3300027763	Freshwater Lake	MPAVKHQQLIFLNFWERKQLEYWLSDNFPRCTIRNLYDTWSSPEELEWYAIEGDITVDMECLLKLKYGNKLKSSNAGIRWTKLK
Ga0209088_100126852	3300027763	Freshwater Lake	MKTQQLIFLNFWESKQLEYWLSDNFPDCRLRCLYDTWSDPEQEEWYAIDGDIPLDMECLLKLKYGNKLKGSNAGIRYGQN
Ga0209088_100281964	3300027763	Freshwater Lake	MPSIKGQQLISLNFWEYKQLEYWLSDNFPECTIRSLYDTWSNPDQEDWYAVEGNITVDIECLLKLKYGNKLKSSNAGIRYGQN
Ga0209088_101169643	3300027763	Freshwater Lake	MGKSQQLISLNFWESKQLEYWIEDNFPDCRVRCLYDTWNDPEQEEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYG
Ga0209088_101185921	3300027763	Freshwater Lake	MKTQQLISLNFWESKQLEYWLSDNFPDCRVRCLYDTWSDPEQEDWYAIEGNIPLDMECLLKLKYGNKLKGSNAGIRYGQN
Ga0209088_101490232	3300027763	Freshwater Lake	MPTVKGQQLIFLNFWECKQLEYWIEDNFPDCRIRTLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYGQN
Ga0209107_102001552	3300027797	Freshwater And Sediment	QLIFLNFWESKQLEYWLEDNFPDCRIRSLYDTWTAPEDSEWYAVEGNITLDLECLLKLKYSDRLKNSNAGIRHGQN
Ga0209400_13122472	3300027963	Freshwater Lake	NFWECKQLEYWIEDNFPDCRIRSLYDTWTAPEELEWYAIEGNITLDMELLLKLKYGNKLKGSNTGIKYGQN
Ga0209191_100002240	3300027969	Freshwater Lake	MGKSQQLISLNFWESKQLEYWIEDNFPDCRVRCLYDTWSDPEQKEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYG
Ga0209191_100005834	3300027969	Freshwater Lake	MKNQQLISLNFWESKQLEYWLEDNFPDCRIRSLYDTWTAPEDSELYAIEGNITLDLECLLKLKYSDRLKNSNAGIRHGQN
Ga0209191_100575410	3300027969	Freshwater Lake	MVSQIKVFLNFWEYKQLEYWLADNFPECTVRTLYDTWSNPEDQDWYAVEGNIDVDTECLIKLKYGNKVTISNAGMRHG
Ga0209191_12071982	3300027969	Freshwater Lake	MPSFKGQQLISLNFWECKQLEYWLADNFPECTIRSLYDTWSNPEEEEWYAIEGDITLDMELLLKLKYGNKLKGSNAGIRYGQN
Ga0209191_12394082	3300027969	Freshwater Lake	MGKSQQLISLNFWECKQLEYWLADNFPECTIRSLYDKWTGPEEEDWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRHG
Ga0335023_0047346_217_468	3300034050	Freshwater	MPTVKSQQLIFLNFWECKQLEYWLEDNFPDCRIRSLYDTWTAPEESEWYAIEGDITLDMELLLKLKYGNKLKGSNAGIRHGQN
Ga0334983_0192879_805_1056	3300034060	Freshwater	MSLVKGQQLIFLNFWECKQLEYWIEDNFPDCRIRSLYDTWTAPEESEWYAIEGNITLDMELLLKLKYGNKLKGSNAGIRYGQN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101169

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences