NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F101190

Metagenome Family F101190

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101190
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 64 residues
Representative Sequence MFNVGDLVQLNYSEHIGIVIDKSDRSLDNTPVYSYHIKWAVGEPYTWELSQNLILVAGVNNAKCI
Number of Associated Samples 57
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 79.41 %
% of genes near scaffold ends (potentially truncated) 20.59 %
% of genes from short scaffolds (< 2000 bps) 71.57 %
Associated GOLD sequencing projects 46
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (70.588 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(75.490 % of family members)
Environment Ontology (ENVO) Unclassified
(97.059 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.176 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 43.01%    Coil/Unstructured: 56.99%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF13619KTSC 4.90
PF01274Malate_synthase 3.92
PF00463ICL 1.96
PF00929RNase_T 0.98
PF13385Laminin_G_3 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG2225Malate synthaseEnergy production and conversion [C] 3.92
COG2224Isocitrate lyaseEnergy production and conversion [C] 1.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A70.59 %
All OrganismsrootAll Organisms29.41 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002484|JGI25129J35166_1011697All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium2225Open in IMG/M
3300002514|JGI25133J35611_10057326All Organisms → Viruses → Predicted Viral1281Open in IMG/M
3300002514|JGI25133J35611_10085050Not Available964Open in IMG/M
3300002514|JGI25133J35611_10124766Not Available730Open in IMG/M
3300002514|JGI25133J35611_10208696Not Available509Open in IMG/M
3300002518|JGI25134J35505_10014620All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium2512Open in IMG/M
3300002518|JGI25134J35505_10026921Not Available1671Open in IMG/M
3300002519|JGI25130J35507_1029285Not Available1196Open in IMG/M
3300002519|JGI25130J35507_1068549Not Available673Open in IMG/M
3300003690|PicViral_1001248Not Available10956Open in IMG/M
3300005595|Ga0066833_10093170All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium829Open in IMG/M
3300005603|Ga0066853_10168430Not Available735Open in IMG/M
3300006465|Ga0082250_10092791Not Available738Open in IMG/M
3300006736|Ga0098033_1147081Not Available661Open in IMG/M
3300006736|Ga0098033_1202079Not Available550Open in IMG/M
3300006738|Ga0098035_1017142All Organisms → cellular organisms → Bacteria2875Open in IMG/M
3300006738|Ga0098035_1055859All Organisms → Viruses → Predicted Viral1433Open in IMG/M
3300006738|Ga0098035_1076788All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1184Open in IMG/M
3300006738|Ga0098035_1091986Not Available1063Open in IMG/M
3300006738|Ga0098035_1144856Not Available810Open in IMG/M
3300006738|Ga0098035_1166922Not Available743Open in IMG/M
3300006738|Ga0098035_1182920Not Available704Open in IMG/M
3300006750|Ga0098058_1012336All Organisms → cellular organisms → Bacteria2546Open in IMG/M
3300006750|Ga0098058_1065379Not Available1009Open in IMG/M
3300006751|Ga0098040_1005226All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium4788Open in IMG/M
3300006751|Ga0098040_1007520All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium3904Open in IMG/M
3300006751|Ga0098040_1119470Not Available788Open in IMG/M
3300006753|Ga0098039_1029743All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1941Open in IMG/M
3300006753|Ga0098039_1036953Not Available1729Open in IMG/M
3300006753|Ga0098039_1133499All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300006753|Ga0098039_1236926Not Available615Open in IMG/M
3300006754|Ga0098044_1006901Not Available5503Open in IMG/M
3300006754|Ga0098044_1013981Not Available3686Open in IMG/M
3300006754|Ga0098044_1082963Not Available1327Open in IMG/M
3300006754|Ga0098044_1245965Not Available694Open in IMG/M
3300006789|Ga0098054_1301597Not Available573Open in IMG/M
3300006793|Ga0098055_1003231Not Available8286Open in IMG/M
3300006793|Ga0098055_1267762Not Available641Open in IMG/M
3300006925|Ga0098050_1002285Not Available6427Open in IMG/M
3300006926|Ga0098057_1119346Not Available643Open in IMG/M
3300006927|Ga0098034_1007858Not Available3434Open in IMG/M
3300006927|Ga0098034_1008366Not Available3316Open in IMG/M
3300008216|Ga0114898_1136809Not Available711Open in IMG/M
3300009128|Ga0118727_1256364Not Available1085Open in IMG/M
3300009130|Ga0118729_1003029All Organisms → cellular organisms → Bacteria17431Open in IMG/M
3300009409|Ga0114993_10327389Not Available1162Open in IMG/M
3300009413|Ga0114902_1025416All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1867Open in IMG/M
3300009418|Ga0114908_1105766Not Available937Open in IMG/M
3300009418|Ga0114908_1250046Not Available538Open in IMG/M
3300009605|Ga0114906_1085965Not Available1145Open in IMG/M
3300009706|Ga0115002_11021144Not Available566Open in IMG/M
3300010151|Ga0098061_1110643All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1018Open in IMG/M
3300010151|Ga0098061_1271184Not Available588Open in IMG/M
3300010151|Ga0098061_1285964Not Available569Open in IMG/M
3300010153|Ga0098059_1173890All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300017703|Ga0181367_1004873All Organisms → cellular organisms → Bacteria2482Open in IMG/M
3300017703|Ga0181367_1019361Not Available1238Open in IMG/M
3300017704|Ga0181371_1002051All Organisms → cellular organisms → Bacteria3922Open in IMG/M
3300017704|Ga0181371_1031636Not Available870Open in IMG/M
3300017715|Ga0181370_1042372Not Available587Open in IMG/M
3300022227|Ga0187827_10354987All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium925Open in IMG/M
(restricted) 3300023112|Ga0233411_10173333All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium707Open in IMG/M
(restricted) 3300024057|Ga0255051_10374824Not Available527Open in IMG/M
(restricted) 3300024259|Ga0233437_1290275Not Available640Open in IMG/M
(restricted) 3300024518|Ga0255048_10148508All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1150Open in IMG/M
3300025066|Ga0208012_1000978Not Available8408Open in IMG/M
3300025066|Ga0208012_1002727All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium4128Open in IMG/M
3300025084|Ga0208298_1003189All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium5155Open in IMG/M
3300025085|Ga0208792_1044370All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium847Open in IMG/M
3300025096|Ga0208011_1010453Not Available2592Open in IMG/M
3300025096|Ga0208011_1013822All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium2171Open in IMG/M
3300025096|Ga0208011_1014303Not Available2127Open in IMG/M
3300025097|Ga0208010_1002281Not Available6106Open in IMG/M
3300025108|Ga0208793_1141665Not Available641Open in IMG/M
3300025109|Ga0208553_1063464Not Available896Open in IMG/M
3300025109|Ga0208553_1135519Not Available548Open in IMG/M
3300025112|Ga0209349_1098982Not Available835Open in IMG/M
3300025114|Ga0208433_1022265Not Available1796Open in IMG/M
3300025114|Ga0208433_1049030All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1126Open in IMG/M
3300025122|Ga0209434_1000705Not Available15747Open in IMG/M
3300025122|Ga0209434_1021332Not Available2203Open in IMG/M
3300025122|Ga0209434_1034005Not Available1651Open in IMG/M
3300025122|Ga0209434_1039902Not Available1496Open in IMG/M
3300025131|Ga0209128_1016393All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium3381Open in IMG/M
3300025131|Ga0209128_1022274Not Available2729Open in IMG/M
3300025131|Ga0209128_1025332Not Available2498Open in IMG/M
3300025131|Ga0209128_1078566Not Available1114Open in IMG/M
3300025141|Ga0209756_1020324All Organisms → cellular organisms → Bacteria3861Open in IMG/M
3300025141|Ga0209756_1129538Not Available1043Open in IMG/M
3300025141|Ga0209756_1180582All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium823Open in IMG/M
3300025141|Ga0209756_1275580Not Available605Open in IMG/M
3300025268|Ga0207894_1089019Not Available522Open in IMG/M
3300025280|Ga0208449_1068974Not Available898Open in IMG/M
3300025592|Ga0209658_1061059All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium971Open in IMG/M
3300028018|Ga0256381_1028624Not Available900Open in IMG/M
3300028018|Ga0256381_1046617Not Available673Open in IMG/M
3300028018|Ga0256381_1048962Not Available652Open in IMG/M
3300028039|Ga0256380_1039167Not Available743Open in IMG/M
3300028039|Ga0256380_1061573Not Available553Open in IMG/M
(restricted) 3300028045|Ga0233414_10604278Not Available520Open in IMG/M
3300032278|Ga0310345_10767101Not Available937Open in IMG/M
3300032820|Ga0310342_101638610Not Available767Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine75.49%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean6.86%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater4.90%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater4.90%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.94%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.96%
SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Sediment0.98%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.98%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume0.98%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002519Marine viral communities from the Pacific Ocean - ETNP_2_300EnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300005595Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47BEnvironmentalOpen in IMG/M
3300005603Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61EnvironmentalOpen in IMG/M
3300006465Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten IXEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300009128Combined Assembly of Gp0137084, Gp0137083EnvironmentalOpen in IMG/M
3300009130Combined Assembly of Gp0139511, Gp0139512EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017715Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaGEnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300023112 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MGEnvironmentalOpen in IMG/M
3300024057 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_9EnvironmentalOpen in IMG/M
3300024259 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MGEnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025592Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300028039Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300mEnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25129J35166_101169723300002484MarineMFNVGDLIKLNYSEHIGIVIDSSDRSLTDESQVYVYRIKWAVGEPYTWERFYNLTLVAGVNNAKCI*
JGI25133J35611_1005732633300002514MarineMFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
JGI25133J35611_1008505043300002514MarineMFNVGDLVQLNYSDHIGIVIEKRSEIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
JGI25133J35611_1012476623300002514MarineMFNVGDLIKLNYSEHIGIVIDSSDRSLTDESQVYVYRIKWAVGEPYTWERFYNLTLVAGVNNANV*
JGI25133J35611_1020869633300002514MarineLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
JGI25134J35505_1001462073300002518MarineMQKFNIGDLVQLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
JGI25134J35505_1002692133300002518MarineMSKFNVGDLVQLNYSEHLGIVIGKSSSDWRRRKEHAYSYRIKWAVGEPFTWEKSKCLIMKARVNNEKRI*
JGI25130J35507_102928523300002519MarineMNNIFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
JGI25130J35507_106854923300002519MarineMFNIGDLVQLNYSEHIGIVIDKSDRALAGFPVVYSYHIKWAVGEPYTWELSQNLILVAGVNNAKCI*
PicViral_1001248113300003690Marine, Hydrothermal Vent PlumeMFNIGDLVKLNYSEHIGIVIEKSDRALKSYTPIYSYHIKWAVGEPYTWELTQNLILVAGINNAKHI*
Ga0066833_1009317013300005595MarineMFNVGDLIKLNYSEHIGIVIDSSDRSLTDESQVYVYRIKWAVGEPYTWERFYNLTLVA
Ga0066853_1016843033300005603MarineMFKVGDLVKLNYSEHIGIVIKKSELGKATNTPVYSYRIKWALGEPFTWEVVKNLTLVAG
Ga0082250_1009279133300006465SedimentMSKFNVGDLVQLNYSKHIGIVIEKSDRSLSAPHESPVYSYHIKWAVGEPYTWELSQNLILVAGINNEKRI*
Ga0098033_114708133300006736MarineMNNIFNVGDLVQLNYSEHIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLILVAGVNSAKCI*
Ga0098033_120207923300006736MarineMFNVGDLIQLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSQNLILVVGVNDEQRI*
Ga0098035_101714213300006738MarineSIGEVIMFNVGDLVQLNYSEHIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLTLVAGVNSANV*
Ga0098035_105585933300006738MarineMFNVGDLVQLNYSEHIGIVIDKSDRALAGFPVVYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
Ga0098035_107678843300006738MarineMFEIGDLVKLNYSEHIGIVIDSSDRSLTDESRVYVYRIKWAVGEPYTWERFYNLTLVAGVNSANV*
Ga0098035_109198663300006738MarineVQLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWERLYNLTLVAGVNNEKRI*
Ga0098035_114485623300006738MarineMFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNDE*
Ga0098035_116692243300006738MarineMFNIGDLVQLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSQNLILVAGVNNAKCI*
Ga0098035_118292023300006738MarineMFNIGDLVQLHYSHHIGIVIDKSDRSLQRPPIYSYRIKWAVGEPYTWEQPQNLILVAGVNGEQRI*
Ga0098058_1012336113300006750MarineMFKVGDLIKLNYSEYIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLILVAGVNSAKCI*
Ga0098058_106537913300006750MarineIGEVIMFNIGDLVQLNYSEHIGIVINKSDRSLDNTPVYSYHIKWAVGEPYTWELSQNLILVAGVNDE*
Ga0098040_100522663300006751MarineMNNLFGVGDLVQLHYSHHIGIVIDKSDRSLDNTPVYSYHIKWAVGEPYTWELSQNLILVAGVNNE*
Ga0098040_1007520103300006751MarineMFNVGDLVQLNYSHHIGIVIRKTELDEAVSTAVYSYLIKWAVGEPFTWETDKSLILKAGVNNV*
Ga0098040_111947033300006751MarineMFNIGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNNAKCI*
Ga0098039_102974373300006753MarineMFNVGDLIQLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSQ
Ga0098039_103695343300006753MarineMNNIFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNNE*
Ga0098039_113349943300006753MarineMFNVGDLIKLNYSEHIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLILVAGVNSAKCI*
Ga0098039_123692633300006753MarineMFNVGDLVQLNYSEHIGIVINKSDRSLDNTPVYSYHIKWAVGEPYTWERLYNLTLVAGVNNEKRI*
Ga0098044_1006901143300006754MarineMFNVGDLIKLNYSEHIGIVIDSSDRSLTDESRVYVYRIKWAVGEPYTWERFYNLTLVAGVNSANV*
Ga0098044_101398133300006754MarineMFNVGDLVQLNYSEHIGIVINKSDRSLESYTPIYSYRIKWAVGEPYTWELSQNLILVAGVNNEKRI*
Ga0098044_108296313300006754MarineVGDLVQLNYSEHIGIVINKSDRALAGFPVVYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
Ga0098044_124596523300006754MarineMSKFNVGDLVQLNYSEHLGIVIGKSSSDWRRRKEHAYSYRIKWAVGEPFTWEKSKCLIMKARVNNEK*
Ga0098054_130159723300006789MarineMFKVGDLIKLNYSEYIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLTLVAGVNSANV*
Ga0098055_100323173300006793MarineMFKVGDLIKLNYSEHIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLTLVAGVNSANV*
Ga0098055_126776213300006793MarineIGEVIMSKFNVGDLVQLNYSEHLGIVIGKSSSDWRRRKEHAYSYRIKWAVGEPFTWEKSKCLIMKARVNNEK*
Ga0098050_1002285143300006925MarineMFKVGDLIKLNYSEHIGIVIDSSDRSLTDESRVYVYRIKWAVGEPYTWERFYNLTLVAGVNSANV*
Ga0098057_111934633300006926MarineMSKFNIGDLVKLNYSEHIGIVIDSSDRSLTDESQVYVYRIKWAVGEPYTWERLYNLTLVAGVNNEKRI*
Ga0098034_1007858133300006927MarineFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNDE*
Ga0098034_100836623300006927MarineMFNIGDLVQLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
Ga0114898_113680943300008216Deep OceanGIMFNIGDLVQLHYSHHIGIVIDKSDRSLDNTPVYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
Ga0118727_125636433300009128MarineMFEVGDLVKLNYSEHIGIVIESSDRSLADESQVYVYRIKWAVGEPYTWERFYNLILVAGVNNANV*
Ga0118729_1003029313300009130MarineMFEVGDLVKLNYSEHIGIVIESSDRSLTDESQVYVYRIKWAVGEPYTWERFYNLILVAGVNNANV*
Ga0114993_1032738943300009409MarineMFNVGDLVQLNYSEHIGIVIEVNDRNLAWGSPNYSYRIKWAVGEPFTWEKSDCLIMKARVDNEKSI*
Ga0114902_102541673300009413Deep OceanMFKVGDLVQLNYSHHIGIVIRKTELGKAVSTPVYSYRVKWAVGEPFTWETSECLILVAGVNNEKQI*
Ga0114908_110576633300009418Deep OceanMFKVGDLVQLNYSHHIGIVIRKTELGEAVSTPVYSYRVKWAVGEPFTWETSECLILVAGVNNEKQI*
Ga0114908_125004633300009418Deep OceanMKNAFNIGDLVRLHYSHHIGIVMDKSDRSLDNTPVYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI*
Ga0114906_108596513300009605Deep OceanMNNLFGVGDLVQLHYSHHIGIVIDKSDRSLDNTPVYSYHIKWAVGEPYTW
Ga0115002_1102114413300009706MarineMFNIGDLVQLNYSEHLGIVIESNDRSLTDESQVYVYRIKWAVGEPYTWERRHNLTLVAGVNNAKSV*
Ga0098061_111064333300010151MarineMFNIGDLVQLHYSHHIGIVIDKSDRSLDNTPVYSYHIKWAVGEPYTWELSQNLILVAGVNNE*
Ga0098061_127118413300010151MarineMFNIGDLVQLNYSHHIGIVIRKTELGEAVSTTVYSYLIKWAVGEPFTWETDKSLILKAGVNNV*
Ga0098061_128596433300010151MarineMFNVGDLVQLNYSEHIGIVIDKSDRSLDNTPVYSYHIKWAVGEPYTWELSQNLILVAGVNNAKCI*
Ga0098059_117389043300010153MarineMFNVGDLIKLNYSEHIGIVIDSSDRSLTDESQVYVYRIKWAVGEPYTWERFYNLTLVAGVNSANV*
Ga0181367_100487383300017703MarineMFKVGDLIKLNYSEYIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLTLVAGVNSAKCI
Ga0181367_101936143300017703MarineMFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNNAKCI
Ga0181371_100205163300017704MarineMFEIGDLVKLNYSEHIGIVIDSSDRSLTDESRVYVYRIKWAVGEPYTWERFYNLTLVAGVNSANV
Ga0181371_103163623300017704MarineMFNVGDLVQLNYSEHIGIVINKSDRSLESYTPIYSYRIKWAVGEPYTWELSQNLILVAGVNNAKCI
Ga0181370_104237233300017715MarineMFNVGDLVQLNYSEHIGIVINKSDRSLESYTPIYSYHIKWAVGEPYTWELSQNLILVAGVNDE
Ga0187827_1035498733300022227SeawaterMFNVGDLIKLNYSEHIGIVIDSSDRSLTDESQVYVYRIKWAVGEPYTWERFYNLTLVAGVNNAKCI
(restricted) Ga0233411_1017333313300023112SeawaterMFEIGDLVKLNYSEHIGIVIDNSDRSLTDESQVYVYRIKWAVGEPYTWE
(restricted) Ga0255051_1037482423300024057SeawaterMSKFNVGDLVQLNYSDHIGIVIGKSSCDWRRRKEHAYSYRIKWAVGEPFTWEKSKCLIMKVRVNNEKRI
(restricted) Ga0233437_129027533300024259SeawaterMFEIGDLVKLNYSEHIGIVIDNSDRSLTDESQVYVYRIKWAVGEPYTWERFYNLILVAGVNNAKCI
(restricted) Ga0255048_1014850833300024518SeawaterMFNIGDLVKLNYSEHIGIVIESSDRSLTDESQVYVYRIKWAVGEPYTWERLYNLTLVAGVNNEQRI
Ga0208012_1000978143300025066MarineMFKVGDLIKLNYSEHIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLTLVAGVNSANV
Ga0208012_1002727103300025066MarineMSKFNVGDLVQLNYSEHLGIVIGKSSSDWRRRKEHAYSYRIKWAVGEPFTWEKSKCLIMKARVNNEK
Ga0208298_100318983300025084MarineMFNVGDLIKLNYSEHIGIVIDSSDRSLTDESRVYVYRIKWAVGEPYTWERFYNLTLVAGVNSANV
Ga0208792_104437023300025085MarineMFKVGDLIKLNYSEYIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLTLVAGVNSANV
Ga0208011_101045343300025096MarineMNNLFGVGDLVQLHYSHHIGIVIDKSDRSLDNTPVYSYHIKWAVGEPYTWELSQNLILVAGVNNE
Ga0208011_101382243300025096MarineMFNIGDLVQLHYSHHIGIVIDKSDRSLQRPPIYSYRIKWAVGEPYTWEQPQNLILVAGVNGEQRI
Ga0208011_101430323300025096MarineMFNIGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNNAKCI
Ga0208010_1002281153300025097MarineMFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNDE
Ga0208793_114166533300025108MarineIGEVIMSKFNVGDLVQLNYSEHLGIVIGKSSSDWRRRKEHAYSYRIKWAVGEPFTWEKSKCLIMKARVNNEK
Ga0208553_106346433300025109MarineMNNIFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI
Ga0208553_113551923300025109MarineMFNVGDLIQLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI
Ga0209349_109898233300025112MarineMSKFNVGDLVQLNYSEHLGIVIGKSSSDWRRRKEHAYSYRIKWAVGEPFTWEKSKCLIMKARVNNEKRI
Ga0208433_102226593300025114MarineMFNIGDLVQLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSQNLILVAGVNNAKCI
Ga0208433_104903023300025114MarineMFNVGDLVQLNYSEHIGIVIDKSDRALAGFPVVYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI
Ga0209434_1000705313300025122MarineMFNIGDLVQLNYSHHIGIVIRKTELGEAVSTAVYSYLIKWAVGEPFTWETDKSLILKAGVNNV
Ga0209434_102133293300025122MarineMNNIFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRV
Ga0209434_103400513300025122MarineMSKFNVGDLVQLNYSEHIGIVIGKSSSDWRRRKEHAYSYRIKWAVGEPFTWEKSKCLIMKARVNNEKRI
Ga0209434_103990283300025122MarineMFNVGDLVQLNYSEHIGIVINKSDRSLDNTPVYSYHIKWAVGEPYTWERLYNLTLVAGVNNEKRI
Ga0209128_101639333300025131MarineMFNVGDLVQLNYSEHIGIVIDKSDRPREIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI
Ga0209128_1022274123300025131MarineVQLNYSHHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSPNLILVAGVNNEQRI
Ga0209128_1025332123300025131MarineMSKFNVGDLVQLNYSEHLGIVIGKSSCDWRRRKEHAYSYRIKWAVGEPFTWEKSKCLIMKARVNNEKRI
Ga0209128_107856643300025131MarineMFNVGDLVQLNYSDHIGIVIEKRSEIYSYRIKWAVGEPYTWELSQNLILVAGVNNEKRI
Ga0209756_102032463300025141MarineMFNVGDLIKLNYSEHIGIVIDSSDRSLTDESQVYVYRIKWAVGEPYTWERFYNLTLVAGVNNANV
Ga0209756_112953853300025141MarineQLNYSHHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWELSPNLILVAGVNNEQRI
Ga0209756_118058213300025141MarineMQKFNIGDLVQLNYSEHIGIVIDKSDRSLESYTPIYSYHIKWAVGEPYTWEQTQNLI
Ga0209756_127558033300025141MarineMFNVGDLVQLNYSDHIGIVIEKRSEIYSYHIKWAVGEPYTWELSQNLILVAGVNNEKRI
Ga0207894_108901923300025268Deep OceanMFNIGDLVQLNYSHHIGIVIRKTELGEAVSTAVYSYLIKWAVGEPFTWETDRSLILKAGVNNV
Ga0208449_106897433300025280Deep OceanMFKVGDLVQLNYSHHIGIVIRKTELGEAVSTPVYSYRVKWAVGEPFTWETSECLILVAGVNNEKQI
Ga0209658_106105933300025592MarineMFNVGDLIKLNYSEHIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLTLVAGVNNANV
Ga0256381_102862443300028018SeawaterMNKKFNVGDLVQLNYSKHLGIVIRKSELGKAVNTPVYSYRVKWAVGEPFTWETSECLILKAGVNNEKRI
Ga0256381_104661733300028018SeawaterMNNLFEVGDLVKLNYSEHIGMVIGDSDRSLSEELQVHVYRIKWAVGEPYTWERLYNLILVAGVNNEKRI
Ga0256381_104896223300028018SeawaterMKFNIGDLVQLNYSEHIGIVIEKTAWDRTNRGLTYSYRIKWAVGEPFTWEKSEHLIMKARTQ
Ga0256380_103916743300028039SeawaterKKFNVGDLVQLNYSKHLGIVIRKSELGKAVNTPVYSYRVKWAVGEPFTWETSECLILKAGVNNEKRI
Ga0256380_106157323300028039SeawaterMFNIGDLVQLNYSHHIGIVIDKDNRSLYEDFSTNYAYHIKWAVGEPYTWELSQNLILVAGCRS
(restricted) Ga0233414_1060427833300028045SeawaterFNVGDLIKLNYSEHIGIVIKKSELGKANIAPVYSYHIKWAVGEPFTWEIARNLTLVAGVNNANV
Ga0310345_1076710133300032278SeawaterMSKFNIGDLVQLNYSHHIGIVIKISEIGEAVSTPVYSYRIKWAVGEPFTWETSEHLIMKARAQ
Ga0310342_10163861043300032820SeawaterMSKFNIGDLVQLNYSHHIGIVIKISEIGEAVSTPVYSYRIKWAVGEPFTWEKSEHLIMKARVNYDKHL


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