Metagenome / Metatranscriptome Family F101375

Basic Information
Family ID	F101375
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	42 residues
Representative Sequence	MCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAN
Number of Associated Samples	82
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	19.61 %
% of genes near scaffold ends (potentially truncated)	20.59 %
% of genes from short scaffolds (< 2000 bps)	86.27 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.569 % of family members)
Environment Ontology (ENVO)	Unclassified (23.529 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.314 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01694	Rhomboid	1.96
PF00118	Cpn60_TCP1	0.98
PF00881	Nitroreductase	0.98
PF07998	Peptidase_M54	0.98
PF00582	Usp	0.98
PF00149	Metallophos	0.98
PF04930	FUN14	0.98
PF14417	MEDS	0.98
PF00578	AhpC-TSA	0.98
PF02230	Abhydrolase_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG1913	Predicted Zn-dependent protease	General function prediction only [R]	0.98
COG2383	Uncharacterized membrane protein, Fun14 family	Function unknown [S]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
cellular organisms	root	All Organisms → cellular organisms	48.04 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	48.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	10.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	10.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	8.82 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	8.82 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	8.82 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	6.86 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1.96 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	6.86 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.96 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_528029_length_1044_cov_7.358238	Not Available	1076	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0652187	All Organisms → cellular organisms → Archaea	1357	Open in IMG/M
3300000041\|ARcpr5oldR_c010952	Not Available	774	Open in IMG/M
3300000787\|JGI11643J11755_11524722	All Organisms → cellular organisms → Archaea	1393	Open in IMG/M
3300000787\|JGI11643J11755_11753395	All Organisms → Viruses → Predicted Viral	2288	Open in IMG/M
3300003990\|Ga0055455_10284086	Not Available	528	Open in IMG/M
3300004006\|Ga0055453_10062397	All Organisms → Viruses → Predicted Viral	1040	Open in IMG/M
3300004114\|Ga0062593_102172921	Not Available	621	Open in IMG/M
3300004114\|Ga0062593_102569234	All Organisms → cellular organisms → Archaea	578	Open in IMG/M
3300004479\|Ga0062595_100100400	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1536	Open in IMG/M
3300005045\|Ga0071328_149474	All Organisms → cellular organisms → Archaea	2869	Open in IMG/M
3300005045\|Ga0071328_163328	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2466	Open in IMG/M
3300005045\|Ga0071328_176462	All Organisms → cellular organisms → Archaea	4701	Open in IMG/M
3300005093\|Ga0062594_100558230	All Organisms → cellular organisms → Archaea	989	Open in IMG/M
3300005093\|Ga0062594_100798580	All Organisms → cellular organisms → Archaea	872	Open in IMG/M
3300005093\|Ga0062594_101486104	Not Available	694	Open in IMG/M
3300005093\|Ga0062594_101786716	Not Available	647	Open in IMG/M
3300005289\|Ga0065704_10265420	Not Available	955	Open in IMG/M
3300005293\|Ga0065715_10022016	All Organisms → cellular organisms → Archaea	2289	Open in IMG/M
3300005441\|Ga0070700_101157273	All Organisms → cellular organisms → Archaea	644	Open in IMG/M
3300005467\|Ga0070706_101518870	Not Available	612	Open in IMG/M
3300005535\|Ga0070684_100593873	All Organisms → cellular organisms → Archaea	1029	Open in IMG/M
3300005578\|Ga0068854_101852596	Not Available	554	Open in IMG/M
3300005884\|Ga0075291_1059070	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	526	Open in IMG/M
3300005887\|Ga0075292_1074263	Not Available	515	Open in IMG/M
3300005889\|Ga0075290_1066323	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300006237\|Ga0097621_101638951	Not Available	612	Open in IMG/M
3300006845\|Ga0075421_100877417	Not Available	1026	Open in IMG/M
3300006847\|Ga0075431_100668641	Not Available	1018	Open in IMG/M
3300006853\|Ga0075420_101052144	Not Available	700	Open in IMG/M
3300006854\|Ga0075425_100009162	All Organisms → cellular organisms → Archaea	10525	Open in IMG/M
3300006903\|Ga0075426_10101227	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2068	Open in IMG/M
3300006969\|Ga0075419_10741477	Not Available	699	Open in IMG/M
3300009012\|Ga0066710_101672418	All Organisms → cellular organisms → Archaea	970	Open in IMG/M
3300009012\|Ga0066710_104276700	Not Available	534	Open in IMG/M
3300009146\|Ga0105091_10033272	Not Available	2253	Open in IMG/M
3300009176\|Ga0105242_11295773	Not Available	752	Open in IMG/M
3300009176\|Ga0105242_12720012	Not Available	545	Open in IMG/M
3300009819\|Ga0105087_1088836	All Organisms → cellular organisms → Archaea	562	Open in IMG/M
3300010047\|Ga0126382_10655505	Not Available	873	Open in IMG/M
3300010371\|Ga0134125_10066585	All Organisms → cellular organisms → Archaea	4010	Open in IMG/M
3300010371\|Ga0134125_11513859	Not Available	731	Open in IMG/M
3300010371\|Ga0134125_12959325	Not Available	515	Open in IMG/M
3300010373\|Ga0134128_10634796	All Organisms → cellular organisms → Archaea	1188	Open in IMG/M
3300010375\|Ga0105239_12100080	All Organisms → cellular organisms → Archaea	656	Open in IMG/M
3300011003\|Ga0138514_100004200	All Organisms → cellular organisms → Archaea	2051	Open in IMG/M
3300011003\|Ga0138514_100040419	All Organisms → cellular organisms → Archaea	915	Open in IMG/M
3300011119\|Ga0105246_10535953	Not Available	1001	Open in IMG/M
3300012204\|Ga0137374_10051223	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	4249	Open in IMG/M
3300012355\|Ga0137369_10324428	All Organisms → cellular organisms → Archaea	1133	Open in IMG/M
3300012668\|Ga0157216_10352576	Not Available	662	Open in IMG/M
3300012684\|Ga0136614_10246502	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1337	Open in IMG/M
3300012937\|Ga0162653_100011861	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1065	Open in IMG/M
3300012941\|Ga0162652_100028230	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	827	Open in IMG/M
3300012951\|Ga0164300_10769397	Not Available	593	Open in IMG/M
3300012951\|Ga0164300_10776921	Not Available	591	Open in IMG/M
3300012955\|Ga0164298_10619832	All Organisms → cellular organisms → Archaea	746	Open in IMG/M
3300012957\|Ga0164303_10497331	Not Available	780	Open in IMG/M
3300012957\|Ga0164303_10628140	Not Available	712	Open in IMG/M
3300012957\|Ga0164303_10692034	Not Available	686	Open in IMG/M
3300012961\|Ga0164302_10182163	All Organisms → cellular organisms → Archaea	1273	Open in IMG/M
3300012984\|Ga0164309_11691822	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300012984\|Ga0164309_11935905	Not Available	505	Open in IMG/M
3300012985\|Ga0164308_10881716	Not Available	787	Open in IMG/M
3300012989\|Ga0164305_10147712	Not Available	1590	Open in IMG/M
3300012989\|Ga0164305_10610328	All Organisms → cellular organisms → Archaea	878	Open in IMG/M
3300013297\|Ga0157378_13213924	All Organisms → cellular organisms → Archaea	508	Open in IMG/M
3300015371\|Ga0132258_13501319	All Organisms → cellular organisms → Archaea	1075	Open in IMG/M
3300015372\|Ga0132256_100161533	All Organisms → cellular organisms → Archaea	2259	Open in IMG/M
3300015373\|Ga0132257_100101306	All Organisms → cellular organisms → Archaea	3315	Open in IMG/M
3300015373\|Ga0132257_103828886	Not Available	547	Open in IMG/M
3300017997\|Ga0184610_1120397	Not Available	845	Open in IMG/M
3300018027\|Ga0184605_10371653	Not Available	644	Open in IMG/M
3300018028\|Ga0184608_10338931	Not Available	660	Open in IMG/M
3300018056\|Ga0184623_10521293	Not Available	505	Open in IMG/M
3300018061\|Ga0184619_10146016	All Organisms → cellular organisms → Archaea	1078	Open in IMG/M
3300018071\|Ga0184618_10480215	Not Available	522	Open in IMG/M
3300019868\|Ga0193720_1028398	Not Available	797	Open in IMG/M
3300019876\|Ga0193703_1047580	Not Available	659	Open in IMG/M
3300019879\|Ga0193723_1021415	All Organisms → cellular organisms → Archaea	1980	Open in IMG/M
3300019881\|Ga0193707_1022253	All Organisms → cellular organisms → Archaea	2096	Open in IMG/M
3300021078\|Ga0210381_10043698	All Organisms → cellular organisms → Archaea	1317	Open in IMG/M
3300021078\|Ga0210381_10063181	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1139	Open in IMG/M
3300021344\|Ga0193719_10415217	All Organisms → cellular organisms → Archaea	552	Open in IMG/M
3300022756\|Ga0222622_10384465	All Organisms → cellular organisms → Archaea	985	Open in IMG/M
3300025910\|Ga0207684_11254827	Not Available	612	Open in IMG/M
3300026121\|Ga0207683_10219737	Not Available	1731	Open in IMG/M
3300027577\|Ga0209874_1153624	All Organisms → cellular organisms → Archaea	517	Open in IMG/M
3300027787\|Ga0209074_10454543	Not Available	548	Open in IMG/M
3300027907\|Ga0207428_10926926	Not Available	614	Open in IMG/M
3300030829\|Ga0308203_1022707	All Organisms → cellular organisms → Archaea	827	Open in IMG/M
3300030829\|Ga0308203_1070528	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	561	Open in IMG/M
3300031091\|Ga0308201_10064778	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	962	Open in IMG/M
3300031092\|Ga0308204_10101175	All Organisms → cellular organisms → Archaea	795	Open in IMG/M
3300031226\|Ga0307497_10475334	Not Available	612	Open in IMG/M
3300031547\|Ga0310887_10478815	Not Available	746	Open in IMG/M
3300031562\|Ga0310886_10542743	Not Available	707	Open in IMG/M
3300031847\|Ga0310907_10741166	Not Available	546	Open in IMG/M
3300032075\|Ga0310890_10634004	Not Available	831	Open in IMG/M
3300032122\|Ga0310895_10573249	Not Available	576	Open in IMG/M
3300032179\|Ga0310889_10076417	Not Available	1375	Open in IMG/M
3300032211\|Ga0310896_10233857	All Organisms → cellular organisms → Archaea	922	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.43%
Host-Associated	Host-Associated	21.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.69%
Plants	Host-Associated → Plants	21.57%
Aquatic	Environmental → Aquatic	12.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.84%
Sediment	Environmental → Aquatic → Sediment	6.86%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	3.92%
Marine	Environmental → Aquatic → Marine	1.96%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.88%
Loam	Environmental → Terrestrial → Soil → Loam	3.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	3.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.96%
Sand	Environmental → Terrestrial → Soil → Sand	1.96%
Ice	Environmental → Aquatic → Freshwater → Ice	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.92%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	3.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.94%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.98%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00103580	2140918013	Soil	MCFEFEIPIKRKTKNPNMIDEEFEVEPELEKVQEPVTVSAK
ICChiseqgaiiDRAFT_06521872	3300000033	Soil	MCFEFEIPNKAKYKNXNXIVEDREIEPELEKVEEPVTVSAR*
ARcpr5oldR_0109521	3300000041	Arabidopsis Rhizosphere	MCFEFEIPNKKKDKNLNMIDEEFEVEPELEKVQEPVTVSVK*
JGI11643J11755_115247221	3300000787	Soil	MCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAN*
JGI11643J11755_117533953	3300000787	Soil	MCFEFEIPIKRKTKNPNMIDEEFEVEPELEKVQEPVTVSAK*
Ga0055455_102840861	3300003990	Natural And Restored Wetlands	MCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAS*
Ga0055453_100623971	3300004006	Natural And Restored Wetlands	MCFEFEIPNKKKDKNLNTIDEELEVEPELKKVQEPITVSIN*
Ga0062593_1021729212	3300004114	Soil	MCFEFEIPNKKKDKNLHTIDEELEVEPELGKAQEPVTVSAK*
Ga0062593_1025692342	3300004114	Soil	YYLMCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAS*
Ga0062595_1001004002	3300004479	Soil	MCFEFEIPYKMRYKNKIRVDEEDLENDPELEKVEEPITITAN*
Ga0071328_1494743	3300005045	Permafrost	MQYYTMCFEFEIPNKKKDKKINTIDEELEVEPELEKVEEPVKVSVN*
Ga0071328_1633282	3300005045	Permafrost	MCFEFEIPSKKKYKNLNMIDEELEFEPELEKVQEPVTGSVN*
Ga0071328_1764623	3300005045	Permafrost	MCFEFEIPNKAKYKNKNEIVEDREIEPELEKVVEPVTVSAS*
Ga0062594_1005582302	3300005093	Soil	MCFELEIPNKKKDKNGNMIDEEFEVEPELGKVQEPVTVPAN*
Ga0062594_1007985801	3300005093	Soil	MCFEFEIPNKAKSKNKNEIVEDTETAPELEKLEEHVTVSTS*
Ga0062594_1014861041	3300005093	Soil	MCFEFEIPNKKKDKNVNMIDEEFEVEPELEKVQEPVTVSAN*
Ga0062594_1017867162	3300005093	Soil	MCFEFEIPIRKKDKNLNMIDEEFEVEPELEKVQEPVTVSAK*
Ga0065704_102654201	3300005289	Switchgrass Rhizosphere	LYFECTKDIMCFEFEIPSRIKSKNVNVINEEDVEIEPELEKVEEPVTVSVN*
Ga0065715_100220162	3300005293	Miscanthus Rhizosphere	MCFEFEIPNKAKYKNKNEIEDREIEPELEKVEEPVTVSAS*
Ga0070700_1011572733	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MCFEFEIPNKKKDKNLNMIDEEFEVEPELEKVQEPVTVSAK*
Ga0070706_1015188702	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MCFEFEIPYKMRYKNKIRVNEEDLENDPELEKVEEPITITAN*
Ga0070684_1005938731	3300005535	Corn Rhizosphere	MSFEFEIPNKAKSKNKNEIVEDTETAPELEKLEEHVTVSAS*
Ga0068854_1018525962	3300005578	Corn Rhizosphere	MCFEFEIPNKAKYKNKNEIVEDMEIEPEPEKVEESVIVSAS*
Ga0075291_10590701	3300005884	Rice Paddy Soil	IMCFELEIPNKKKDKNLNTIDEELEVEPELEKVQEPVTVLVK*
Ga0075292_10742631	3300005887	Rice Paddy Soil	MCFEFEIPNKKKDKSLNTIDEELEVEPELEKVEEPVTVSVN*
Ga0075290_10663232	3300005889	Rice Paddy Soil	MVRKISDYIMCFELEIPNKKKDKNLNTIDEELEVEPELEKVQEPVTVLVK*
Ga0097621_1016389511	3300006237	Miscanthus Rhizosphere	MCFEFEIPNKAKSKNKNEIVEDTETAPELEKLEEHVTVSAS*
Ga0075421_1008774171	3300006845	Populus Rhizosphere	MKTQYYTMCFEFEIPSKIRYKNKNEISEDLEIEPELEKTEEPVIVSAN*
Ga0075431_1006686412	3300006847	Populus Rhizosphere	MKTQYYIMCFEFEIPSKIRYKNKNEISEDLEIEPELEKTEEPVIVSAN*
Ga0075420_1010521441	3300006853	Populus Rhizosphere	MKTQYYIMCFEFEIPSKIRYKNKNEISEDLETEPELEKTEEPVIVSAN*
Ga0075425_10000916213	3300006854	Populus Rhizosphere	MCFEFEIPYKMRYKNKIRVDEEDLENDPELEKVEE
Ga0075426_101012271	3300006903	Populus Rhizosphere	MCFEFEIPYKMRYKNKIRVDEEDLENDPELEKVEEPITIT
Ga0075419_107414771	3300006969	Populus Rhizosphere	MKTQYYIMCFEFEIPSKIRYKNKNEISEDLEIEPELEKTEEPIIVSAN*
Ga0066710_1016724181	3300009012	Grasslands Soil	MCFEFEIPYKMKYKNKTRIDEEDLENEPELEKVEEPITISAN
Ga0066710_1042767001	3300009012	Grasslands Soil	MCFEFEIPNKVKYKGKKEINEDVVSEPELEKVEEPVTISAK
Ga0105091_100332723	3300009146	Freshwater Sediment	MCFEFEIPSKIRYKNKNEISEDLEIEPELEKAEEPVIVSAN*
Ga0105242_112957731	3300009176	Miscanthus Rhizosphere	MCFEFEIPIRKKDKNHNMIDEEFEVEPELEKVQEPVTVSAK*
Ga0105242_127200121	3300009176	Miscanthus Rhizosphere	MCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVAAS*
Ga0105087_10888362	3300009819	Groundwater Sand	MCFEFEIPSKIKNKNKNEVSDDVEIEPELEKVEEPVIVSAN*
Ga0126382_106555051	3300010047	Tropical Forest Soil	MCFDFEITSKIRYKNKNEISEELEIEPELEKSERPEPVIVSAN*
Ga0134125_100665854	3300010371	Terrestrial Soil	MCFEFEIPNKAKYKNKNEIVEDREIETELEKVEEPVTVSAS*
Ga0134125_115138591	3300010371	Terrestrial Soil	MCIEFEILNKKKVKNLNNTIDEELEVGPELEKVQEPVTVSVN*
Ga0134125_129593252	3300010371	Terrestrial Soil	MCFEFEIPNKKKDKNLNIIDEDNTEIEPELEKIQEPVTVSVT*
Ga0134128_106347962	3300010373	Terrestrial Soil	MSFEFEIPNKAKSKNKNEIVEDTETAPELEKLEEHVTVSTS*
Ga0105239_121000801	3300010375	Corn Rhizosphere	FEIPNKKKDKNLHTMDEEFEVEPELEKVQEPVTVSAK*
Ga0138514_1000042002	3300011003	Soil	MCFEFEIPNKAKYKNKNEIVEDGEIEPELEKVEEPVTVSAS*
Ga0138514_1000404192	3300011003	Soil	MCFEFEIPNKKKDKNLNTIDEEFEVEPELEKVQEQVTVLAN*
Ga0105246_105359531	3300011119	Miscanthus Rhizosphere	MCFEFEIPNKAKYKNKNEIVEDREFEPELEKVEEPVTVSAS*
Ga0137374_100512234	3300012204	Vadose Zone Soil	MKHNYQIMCFEYEIPNKMQYKSKNEINEDEDIEPELEKVEETVTISSK*
Ga0137369_103244282	3300012355	Vadose Zone Soil	MCFEYEIPNKMQYKSKNEINEDEDIEPELEKVEETVTISSK*
Ga0157216_103525762	3300012668	Glacier Forefield Soil	MCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSVS*
Ga0136614_102465022	3300012684	Polar Desert Sand	MKCFEFEIPNKKKDKNLNMNDEELEVEPELEKVQEPVTVSVN*
Ga0162653_1000118613	3300012937	Soil	YYTMCIEFEILNKKKDKNLNNTIDEELEVGPEFEKVQEPVTVSVN*
Ga0162652_1000282302	3300012941	Soil	NKKKDKNLNNTIDEELEVGPEFEKVQEPVTVSVN*
Ga0164300_107693972	3300012951	Soil	MCLEFEIPNKAKYKNKNEIVEDIEIEPELEKVEEPVTVSAS*
Ga0164300_107769211	3300012951	Soil	MCFEFEIPIKKKDKNLHTIDEELEVEPELEKVQEPVTVSIK*
Ga0164298_106198322	3300012955	Soil	MAIYYLMCFEFEIPITKKDKNLNIIDEELEVEPELEKVQEPVTVSAK*
Ga0164303_104973312	3300012957	Soil	MCLEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAN*
Ga0164303_106281402	3300012957	Soil	MCFAFEIPTKRKTKDPNMIDEEFEVEPELEKVQEPVTVSAK*
Ga0164303_106920342	3300012957	Soil	MCFEFEIPNKAKYKNKNEIVEDREIEPELERVEEPVTVSAR*
Ga0164302_101821632	3300012961	Soil	MCFEFEIPNKAKSKNKNEIVEDTETAPELEKLEEHV
Ga0164309_116918222	3300012984	Soil	IYYLMCFEFEIPITKKDKNLNIIDEELEVEPELEKVQEPVTV*
Ga0164309_119359051	3300012984	Soil	MCLEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAS*
Ga0164308_108817161	3300012985	Soil	MCFEFEIPNKTKYKNKNEIVEDREIEPELEKVEEPVTVSAN*
Ga0164305_101477121	3300012989	Soil	MCFEFEIPNKAKYKNKNEIEDREIEPELEKVEEPVTVSAN*
Ga0164305_106103282	3300012989	Soil	MCFEFEIPNKKKDKNLHTIDEELEVEPELEKVQEPVTVSI
Ga0157378_132139242	3300013297	Miscanthus Rhizosphere	MCFEFEIPNKKKDKNLHTMDEEFEVEPELEKVQEPVTVSAK*
Ga0132258_135013191	3300015371	Arabidopsis Rhizosphere	YLMCFEFEIPNKAKSKNKNEIVEDTETAPELEKLEEHVTVSAN*
Ga0132256_1001615332	3300015372	Arabidopsis Rhizosphere	MCFEFEIPNKKKDKNLHTMDEEFEVEPELEKVQEPVTVSSK*
Ga0132257_1001013062	3300015373	Arabidopsis Rhizosphere	MCFEFEIPNKAKSKNKNEIVEDTETAPELEKLEEHVTVSAN*
Ga0132257_1038288862	3300015373	Arabidopsis Rhizosphere	FEIPSKIRYKNKNEISEEFEIEPELEKAEEPEPVLVSAN*
Ga0184610_11203972	3300017997	Groundwater Sediment	MCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAS
Ga0184605_103716532	3300018027	Groundwater Sediment	MCIEFEILNKKKDKNLNNTIDEELEVGPELEKVQEPVTVSVN
Ga0184608_103389311	3300018028	Groundwater Sediment	MCFEFEIPNKKKDKNLDMIDEDNTEIEPEPERVQEPVTVSVK
Ga0184623_105212931	3300018056	Groundwater Sediment	MCFEFEIPNKAKYKNKNEIVEDMEIEPELEKVEESVTVSAS
Ga0184619_101460162	3300018061	Groundwater Sediment	MCFEFEIPNKKKDKNLNTIEEDLDVEPELEKVQEPVTVSVK
Ga0184618_104802152	3300018071	Groundwater Sediment	MCFEFEIPNKKKDKNLNTIDEEFEVEPELEKVQEPVTVSAN
Ga0193720_10283982	3300019868	Soil	MCFEFEIPNKKKDKNVNMIDEEFEVEPELEKVQEPVTVSAN
Ga0193703_10475801	3300019876	Soil	LNVYYYLMCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAS
Ga0193723_10214151	3300019879	Soil	YYYLMCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAS
Ga0193707_10222533	3300019881	Soil	MCFEFEIPNKKKGKNLNTIEEDLDIEPELEKVQEPVTVSVK
Ga0210381_100436983	3300021078	Groundwater Sediment	MCFEFEIPNKAKYKNKNEIVEDRENEPELEKVEEPVTVSAS
Ga0210381_100631811	3300021078	Groundwater Sediment	MCFEFEIPNKKKDKNLNNTIDEELEVGPELEKVQEPVTVSVN
Ga0193719_104152172	3300021344	Soil	YFIMCFEFEIPNKKKGKNLNTIEEDLDIEPELEKVQEPVTVSVK
Ga0222622_103844652	3300022756	Groundwater Sediment	IPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAS
Ga0207684_112548272	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MCFEFEIPYKMRYKNKIRVNEEDLENDPELEKVEEPITITAN
Ga0207683_102197373	3300026121	Miscanthus Rhizosphere	MCFEFEIPNKKKDKNVNMIDEEFEVEPELEKVQEPVTVSAK
Ga0209874_11536242	3300027577	Groundwater Sand	MCFEFEIPSKIKNKNKNEVSDDVEIEPELEKVEEPVIVSAN
Ga0209074_104545431	3300027787	Agricultural Soil	MCFEFEIPYKMRYKNKIRVDEEDLENDPELEKVEEPITITAN
Ga0207428_109269262	3300027907	Populus Rhizosphere	MCFEFEIPNKKKDKNLNMIDEEFEVEPELEKVQEPVTVSVK
Ga0308203_10227071	3300030829	Soil	EIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAS
Ga0308203_10705282	3300030829	Soil	FEILNKKKDKNLNNTIDEELEVGPELEKVQEPVTVSVN
Ga0308201_100647781	3300031091	Soil	EFEILNKKKDKNLNNTIDEELEVGPELEKVQEPVTVSVN
Ga0308204_101011751	3300031092	Soil	NVYYYLMCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAS
Ga0307497_104753341	3300031226	Soil	MCFEFEIPNKAKYKNKNEIVEDREIEPELEKVEEPVTVSAN
Ga0310887_104788153	3300031547	Soil	MCFEFEIPNKKKDKNLHTMDEEFEVEPELEKVQEPVTVSAK
Ga0310886_105427431	3300031562	Soil	MCFEFEIPNKARSKNKNEIVEDTETAPELEKLEEHVTVSAS
Ga0310907_107411662	3300031847	Soil	MCFEFEIPNKAKYKNKNEIVEDMEIEPEPEKVEESVIVSAS
Ga0310890_106340042	3300032075	Soil	MCFEFEIPIRKKDKNHNMIDEEFEVEPELEKVQEPVTVSAK
Ga0310895_105732491	3300032122	Soil	MCFEFEIPNKAKSKNKNEIVEDTETAPELEKLEEHVTVSAS
Ga0310889_100764172	3300032179	Soil	MCFEFEIPNKAKSKNKNEIVEDTETAPELEKLEEHVTVSTS
Ga0310896_102338572	3300032211	Soil	MCFEFEIPIRKKDKNLNMIDEEFEVEPELEKVQEPVTVSAK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101375

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign