NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F101437

Metagenome / Metatranscriptome Family F101437

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101437
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 86 residues
Representative Sequence MNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Number of Associated Samples 63
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 51.96 %
% of genes near scaffold ends (potentially truncated) 14.71 %
% of genes from short scaffolds (< 2000 bps) 83.33 %
Associated GOLD sequencing projects 56
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (83.333 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(14.706 % of family members)
Environment Ontology (ENVO) Unclassified
(32.353 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(34.314 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 54.78%    β-sheet: 0.00%    Coil/Unstructured: 45.22%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF01966HD 6.86
PF07238PilZ 3.92
PF13174TPR_6 3.92
PF13464DUF4115 3.92
PF00072Response_reg 2.94
PF04055Radical_SAM 1.96
PF14522Cytochrome_C7 1.96
PF00717Peptidase_S24 1.96
PF01925TauE 0.98
PF01434Peptidase_M41 0.98
PF00164Ribosom_S12_S23 0.98
PF06941NT5C 0.98
PF02384N6_Mtase 0.98
PF00850Hist_deacetyl 0.98
PF02525Flavodoxin_2 0.98
PF04430DUF498 0.98
PF00571CBS 0.98
PF05173DapB_C 0.98
PF13534Fer4_17 0.98
PF00211Guanylate_cyc 0.98
PF01694Rhomboid 0.98
PF01850PIN 0.98
PF03884YacG 0.98
PF01467CTP_transf_like 0.98
PF01894UPF0047 0.98
PF00990GGDEF 0.98
PF09723Zn-ribbon_8 0.98
PF00999Na_H_Exchanger 0.98
PF05099TerB 0.98
PF13487HD_5 0.98
PF04366Ysc84 0.98
PF05973Gp49 0.98
PF00216Bac_DNA_binding 0.98
PF13365Trypsin_2 0.98
PF02609Exonuc_VII_S 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.96
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.98
COG02894-hydroxy-tetrahydrodipicolinate reductaseAmino acid transport and metabolism [E] 0.98
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 0.98
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 0.98
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.98
COG0705Membrane-associated serine protease, rhomboid familyPosttranslational modification, protein turnover, chaperones [O] 0.98
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 0.98
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 0.98
COG1504Uncharacterized conserved protein, DUF498 domainFunction unknown [S] 0.98
COG1722Exonuclease VII small subunitReplication, recombination and repair [L] 0.98
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.98
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 0.98
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.98
COG3024Endogenous inhibitor of DNA gyrase, YacG/DUF329 familyReplication, recombination and repair [L] 0.98
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.98
COG3657Putative component of the toxin-antitoxin plasmid stabilization moduleDefense mechanisms [V] 0.98
COG3737Uncharacterized protein, contains Mth938-like domainFunction unknown [S] 0.98
COG3793Tellurite resistance protein TerBInorganic ion transport and metabolism [P] 0.98
COG45025'(3')-deoxyribonucleotidaseNucleotide transport and metabolism [F] 0.98
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.98
COG4679Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin systemDefense mechanisms [V] 0.98

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.33 %
UnclassifiedrootN/A16.67 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000309|WSSedA1BaDRAFT_1018299All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1139Open in IMG/M
3300001213|JGIcombinedJ13530_107022437All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium969Open in IMG/M
3300001213|JGIcombinedJ13530_107404529All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium819Open in IMG/M
3300001213|JGIcombinedJ13530_107569711Not Available699Open in IMG/M
3300001213|JGIcombinedJ13530_108313970All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium508Open in IMG/M
3300001213|JGIcombinedJ13530_108350799All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium586Open in IMG/M
3300003858|Ga0031656_10002575All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria7308Open in IMG/M
3300003858|Ga0031656_10243808Not Available611Open in IMG/M
3300003859|Ga0031653_10037926All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1329Open in IMG/M
3300004048|Ga0055494_10131942All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium565Open in IMG/M
3300004481|Ga0069718_16060121All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium788Open in IMG/M
3300006224|Ga0079037_100064282All Organisms → cellular organisms → Bacteria → Proteobacteria2939Open in IMG/M
3300006224|Ga0079037_100118902All Organisms → cellular organisms → Bacteria2258Open in IMG/M
3300006224|Ga0079037_100128533All Organisms → cellular organisms → Bacteria2183Open in IMG/M
3300006224|Ga0079037_100857830All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Abyssubacteria → Candidatus Abyssubacteria bacterium SURF_17894Open in IMG/M
3300006930|Ga0079303_10311048All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Abyssubacteria → Candidatus Abyssubacteria bacterium SURF_17653Open in IMG/M
3300007072|Ga0073932_1017870All Organisms → cellular organisms → Bacteria5094Open in IMG/M
3300009037|Ga0105093_10093862All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300009075|Ga0105090_10133054All Organisms → cellular organisms → Bacteria1554Open in IMG/M
3300009078|Ga0105106_10418492All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → unclassified Nitrospira → Nitrospira bacterium SM23_35966Open in IMG/M
3300009078|Ga0105106_10450335Not Available927Open in IMG/M
3300009078|Ga0105106_10878859All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium638Open in IMG/M
3300009081|Ga0105098_10161129Not Available1014Open in IMG/M
3300009091|Ga0102851_10049361All Organisms → cellular organisms → Bacteria3371Open in IMG/M
3300009091|Ga0102851_10358929Not Available1451Open in IMG/M
3300009091|Ga0102851_10473459All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1281Open in IMG/M
3300009091|Ga0102851_12263643All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium619Open in IMG/M
3300009111|Ga0115026_10012936All Organisms → cellular organisms → Bacteria3784Open in IMG/M
3300009111|Ga0115026_10270718All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1174Open in IMG/M
3300009111|Ga0115026_10293947All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1134Open in IMG/M
3300009111|Ga0115026_10915253All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium695Open in IMG/M
3300009111|Ga0115026_11524353Not Available557Open in IMG/M
3300009131|Ga0115027_10116963All Organisms → cellular organisms → Bacteria1568Open in IMG/M
3300009131|Ga0115027_10586240All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium818Open in IMG/M
3300009167|Ga0113563_11204226All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium882Open in IMG/M
3300009179|Ga0115028_11173053All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium630Open in IMG/M
3300010412|Ga0136852_10600929All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1060Open in IMG/M
3300010413|Ga0136851_10901511All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300010430|Ga0118733_104444465Not Available748Open in IMG/M
3300012931|Ga0153915_10352213All Organisms → cellular organisms → Bacteria1656Open in IMG/M
3300017939|Ga0187775_10021721Not Available1762Open in IMG/M
3300018029|Ga0187787_10018331Not Available1849Open in IMG/M
3300019252|Ga0172286_1048534All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium509Open in IMG/M
3300022554|Ga0212093_1077570All Organisms → cellular organisms → Bacteria1662Open in IMG/M
3300026350|Ga0256823_1013727All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium711Open in IMG/M
3300026353|Ga0256818_1000934All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1612Open in IMG/M
3300026373|Ga0256817_1004216All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1023Open in IMG/M
3300026375|Ga0256803_1011164All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium849Open in IMG/M
3300027713|Ga0209286_1015239All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium2777Open in IMG/M
(restricted) 3300027856|Ga0255054_10130817Not Available1241Open in IMG/M
3300027871|Ga0209397_10159701All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1009Open in IMG/M
3300027877|Ga0209293_10029005All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2084Open in IMG/M
3300027877|Ga0209293_10029644All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium2068Open in IMG/M
3300027877|Ga0209293_10045395All Organisms → cellular organisms → Bacteria1772Open in IMG/M
3300027877|Ga0209293_10172385All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1044Open in IMG/M
3300027885|Ga0209450_10203179All Organisms → cellular organisms → Bacteria1400Open in IMG/M
3300027885|Ga0209450_10571242Not Available827Open in IMG/M
3300027887|Ga0208980_10122906Not Available1523Open in IMG/M
3300027887|Ga0208980_10395297All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium798Open in IMG/M
3300027887|Ga0208980_10486771All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium708Open in IMG/M
3300027887|Ga0208980_10854780All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium506Open in IMG/M
3300027897|Ga0209254_10032188All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium4692Open in IMG/M
3300027897|Ga0209254_10232859Not Available1450Open in IMG/M
3300027897|Ga0209254_10365377All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1081Open in IMG/M
3300027897|Ga0209254_10522766All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium853Open in IMG/M
3300027899|Ga0209668_10640177All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium712Open in IMG/M
3300027900|Ga0209253_10202243All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1585Open in IMG/M
3300027979|Ga0209705_10435475Not Available648Open in IMG/M
3300031539|Ga0307380_10599801All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium948Open in IMG/M
3300031565|Ga0307379_10150600All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium2444Open in IMG/M
3300031566|Ga0307378_10315359All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1471Open in IMG/M
3300031578|Ga0307376_10265940All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1153Open in IMG/M
3300031707|Ga0315291_10484309All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1152Open in IMG/M
3300031772|Ga0315288_10767303All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → unclassified Nitrospira → Nitrospira bacterium SM23_35896Open in IMG/M
3300031834|Ga0315290_10156646All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1962Open in IMG/M
3300031834|Ga0315290_10175081All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1856Open in IMG/M
3300031834|Ga0315290_10861109All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium771Open in IMG/M
3300031873|Ga0315297_10126510All Organisms → cellular organisms → Bacteria2054Open in IMG/M
3300031873|Ga0315297_10283858All Organisms → cellular organisms → Bacteria → Nitrospirae1377Open in IMG/M
3300031873|Ga0315297_10654509All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium881Open in IMG/M
3300031873|Ga0315297_10690899All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium854Open in IMG/M
3300032053|Ga0315284_11832485All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium624Open in IMG/M
3300032156|Ga0315295_10197561All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium2018Open in IMG/M
3300032342|Ga0315286_10334537All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300032401|Ga0315275_10488523All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium1379Open in IMG/M
3300032401|Ga0315275_11153120All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium845Open in IMG/M
3300033406|Ga0316604_10084179All Organisms → cellular organisms → Bacteria1658Open in IMG/M
3300033414|Ga0316619_10024438All Organisms → cellular organisms → Bacteria → Nitrospirae2959Open in IMG/M
3300033414|Ga0316619_10196238All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1447Open in IMG/M
3300033433|Ga0326726_10053804All Organisms → cellular organisms → Bacteria3524Open in IMG/M
3300033434|Ga0316613_11026505All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium568Open in IMG/M
3300033481|Ga0316600_11266807All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium524Open in IMG/M
3300033482|Ga0316627_102695435All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium527Open in IMG/M
3300033483|Ga0316629_10409297All Organisms → cellular organisms → Bacteria → Nitrospirae958Open in IMG/M
3300033485|Ga0316626_10835609All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium810Open in IMG/M
3300033487|Ga0316630_11752617All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium566Open in IMG/M
3300033513|Ga0316628_100001125All Organisms → cellular organisms → Bacteria → Nitrospirae18528Open in IMG/M
3300033513|Ga0316628_101006887Not Available1106Open in IMG/M
3300033513|Ga0316628_101451491Not Available914Open in IMG/M
3300033513|Ga0316628_101903929Not Available790Open in IMG/M
3300033557|Ga0316617_100660284All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium981Open in IMG/M
3300033557|Ga0316617_102454382All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium541Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil14.71%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland13.73%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment13.73%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment10.78%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland9.80%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands8.82%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment7.84%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment3.92%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil3.92%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.96%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment1.96%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.96%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.98%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.98%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.98%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.98%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.98%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.98%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.98%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000309Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300003858Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DIEnvironmentalOpen in IMG/M
3300003859Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BREnvironmentalOpen in IMG/M
3300004048Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2EnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300007072Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaGEnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009075Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300010412Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10EnvironmentalOpen in IMG/M
3300010413Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300019252Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022554Dewar_combined assemblyEnvironmentalOpen in IMG/M
3300026350Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU6EnvironmentalOpen in IMG/M
3300026353Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR4EnvironmentalOpen in IMG/M
3300026373Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 F6EnvironmentalOpen in IMG/M
3300026375Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 CS6EnvironmentalOpen in IMG/M
3300027713Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027856 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033406Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033434Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_bEnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
WSSedA1BaDRAFT_101829923300000309WetlandMILKTLALVVAIIFLLTHSGCASVNKNQMQTTTAYSENPVADFDTQMKKNEREWLLMALIVLGIAIVLGATISAASGGNGFFLGVNN*
JGIcombinedJ13530_10702243713300001213WetlandKQMNSKTLALLMAIIFLLTHSGCATLNKGQMQTDTAYTENTMSDWDTQWKKEEKEWLLMVLIVLGVAIVLGATISAAAGGNGLFIGVNK*
JGIcombinedJ13530_10740452913300001213WetlandMVAVIFLLTHSGCAGVNTNQAQTKIAYPENSVADTISQKEKDEREWLITVLIVLGIAIALGATISASSGGNGFFLGTNN*
JGIcombinedJ13530_10756971123300001213WetlandMINTMKLRTLALVVAIIFLITHSGCASLSKNQMQTTNAYSEFPVDDFNTQMKKDTREWLFVALIVLGIAIALGATISASSSGGGFSMGIHH*
JGIcombinedJ13530_10831397013300001213WetlandVKKKMNSRILILIVAVLFLLTHSGCAGLNKNQIQTNTAYTENFVADTKSQTEKDTREWLITVLIILGIAIALGATISASSGGDGFFLGVNN*
JGIcombinedJ13530_10835079913300001213WetlandMKLRTLALVVAIIFLITHSGCASLNKNQIQTTTAFSEIPADDFDTQKKKDAKEWLLMALIVLGIAIALGATISASS
Ga0031656_1000257553300003858Freshwater Lake SedimentMNMRALALVMAIIFLLTHSGCATLNKSQMQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN*
Ga0031656_1024380813300003858Freshwater Lake SedimentMKLKTLALVVTIIFLLTHSGCASVNKNQMQTTTSYSENPVADFDTQMKKNEREWLLMALIVLGISIALGATISAGWVFVGNK*
Ga0031653_1003792613300003859Freshwater Lake SedimentMKLKTLALVVAIIFLLTHSGCASVNKNQMQTTTAYSENPVADVDTQMKKNEREWLLMALIVLGIAIALGATISASSGGNGFFLGINN*
Ga0055494_1013194213300004048Natural And Restored WetlandsMTYKTLALAVAIIFLLTHSGCASVNKNQLQTNTAYSENPLADFDTQKKKDEKEWLLMVLIVLGIGIVFGAAIAASSGGNGFFIGINN*
Ga0069718_1606012113300004481SedimentMAIIFLLTHSGCATLNKGQMQTNTSYSENPLADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN*
Ga0079037_10006428223300006224Freshwater WetlandsMNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN*
Ga0079037_10011890213300006224Freshwater WetlandsMNTRALALFMAIIFLLTHSGCATLNKNQMQTNTAYSENPVADFDTKWKKDEREWLLMVLIVLGFAIVLGASISASSGGDGFFLGINK*
Ga0079037_10012853323300006224Freshwater WetlandsMNSKTLALVVAIIFLLTQSGCATLNKSQIQTNYPYPENPVIDFDTKWKKDEREWMLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN*
Ga0079037_10085783023300006224Freshwater WetlandsMGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKREEKEWMLMVLIVLGIAIAVGASISASSGGDGFVMGVNK*
Ga0079303_1031104813300006930Deep SubsurfaceMGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYSENSVADFDTQMKKEEKEWMLMVLIVLGIAIAVGASIFASSGGDGFVLGVNK*
Ga0073932_101787023300007072Hot Spring SedimentMRALVFVIAIIFLLTQSGCATVHNGQVQTVPGLSENPVSDSDTQWEKEEREWLLMLAIVLGLAIVLGATIAASSGGNGFFLGVNN*
Ga0105093_1009386243300009037Freshwater SedimentMKSKTLAIVVAIIFLLTQIGCATLKNNQVQQNADYSANAVADFDAKWRKDEKEWLLMVLIVLGVAVVLGAAISASSGGNGFSLGVNR*
Ga0105090_1013305433300009075Freshwater SedimentMKYKTLALAVAIIFLLTHSGCASVNKNQIQTTAAYSENPFADFDAQKKKDEKEWLLMVLIVLGIGIVFGAAIAASSGGDGFFVGINN*
Ga0105106_1041849223300009078Freshwater SedimentMNTKTLALVMAIIFLLTHSGCATLNKSQLQTNTEYSENPAADFDTQWKKEEREWLFMVLIVLGFAVVLGATISASSGGNGFFLGINN*
Ga0105106_1045033513300009078Freshwater SedimentMGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPVADFDTQMKKEEKEWMLMVLIVLGIAIAVGASIFASSGGDGFVMGVNK*
Ga0105106_1087885913300009078Freshwater SedimentMNTKTLALVIAIIFLITHSGCATLNKGQMQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN*
Ga0105098_1016112923300009081Freshwater SedimentMFKGIWLFTLTFPKINLMKYKTVALVVAVIFLLTHSGCASVNKNQTQMSTAYSESPLAEFDTQKKKDEKEWLLMVLIVLGIGIVFGAAIAASSGGDGFFVGINN*
Ga0102851_1004936123300009091Freshwater WetlandsMNSKTLALVVAIIFLLTQSGCATLNKSQIQTNSPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN*
Ga0102851_1035892953300009091Freshwater WetlandsMGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKKEEKEWMLMVLIVLGIAIAVGASIFASSGGDGFVMGVNK*
Ga0102851_1047345923300009091Freshwater WetlandsMNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN*
Ga0102851_1226364313300009091Freshwater WetlandsMNRKALALVMAIIFLLTHSGCATLNKNQIQTDTAYSENAVTDFDTQWKKEEREWLLMVLIVLGFAIVLGASISASSGGNGFFLGINN*
Ga0115026_1001293663300009111WetlandMNSKILALVVAIIFLLTQSGCATLNKSQIQTNYPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN*
Ga0115026_1027071823300009111WetlandMNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN*
Ga0115026_1029394713300009111WetlandMNSKTLALVVAIIFLLTQMGCATLNTSQMQTNSPYPGNPVTDFDAKWKQDEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINK*
Ga0115026_1091525313300009111WetlandLALVVAIIFLLTQMGCATLNTSQMQTNTPYPENPVTDFDAKWKKDEREWLLMGAIVLGLAIVLGATISASSGGNGFFLGVNN*
Ga0115026_1152435313300009111WetlandMKLKTLALVVAVIFLITHSGCASVNKNQIQTTTAYSENPVADFDTQMKKNEREWLLMALIVLGISIALGATISAGWVFIGNK*
Ga0115027_1011696313300009131WetlandMGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNN*
Ga0115027_1058624013300009131WetlandMNSKTLALVVAIIFLLTQSGCATFNKSQIQTNSPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGHGFFLGVNN*
Ga0113563_1120422623300009167Freshwater WetlandsMSDHNPFDPFQYILVRENLMNRKALALVMAIIFLLTHSGCATLNKNQIQTDTAYSENAVTDFDTQWKKEEREWLLMVLIVLGFAIVLGASISASSGGNGFFLGINN*
Ga0115028_1117305323300009179WetlandMGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYSENSVADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNN*
Ga0136852_1060092923300010412Mangrove SedimentMNTRILALVIAVIFFLTHSGCATVNHGQIQTNNPYPENPVTDFDTKWKKDEREWLIMMAIVLGLALVLGATISASSGGNGLFLGINN*
Ga0136851_1090151123300010413Mangrove SedimentMNSKILSLFLVVILLLTHSGCATLNKSQMQTDTAYSTNTLSDRQAEWKKEEREWLIAVLIVLGVAIALGATISASSGGDGFFLGANN*
Ga0118733_10444446523300010430Marine SedimentMKLKTLALLVAIIFLVTHSGCASVNKNQMQTTTAYSENPVADFDTQMKKDQREWLLMVLIVLGIAIAVGATISAASGGHGFIIGINN*
Ga0153915_1035221343300012931Freshwater WetlandsMNARILILIVAVIFLLTHSGCAGLNKNQIQTNTAYSENYVADTKSQMEKDTREWLITVLIILGIAIALGATISASSGGDGFFLGINN*
Ga0187775_1002172133300017939Tropical PeatlandMNSRIFVLIMAIIFLLTHSGCATLNKSQMQTNPAYSENTVADWETQRKKEEREWLLTVLIVLGIAMVAGSTIAVSSGGGGFFLGINK
Ga0187787_1001833133300018029Tropical PeatlandMAIIFLLTHSGCATLNKSQMQTNPAYSENTVADWETQRKKEEREWLLTVLIVLGIAMVAGSTIAVSSGGGGFFLGINK
Ga0172286_104853413300019252WetlandRALALFMAIIFLLTHSGCATLNKNQMQTNTAYSENPVADFDTKWKKDEREWLLMVLIVLGFAIVLGASISASSGGDGFFLGINK
Ga0212093_107757023300022554Hot Spring SedimentMRALVFVIAIIFLLTQSGCATVHNGQVQTVPGLSENPVSDSDTQWEKEEREWLLMLAIVLGLAIVLGATIAASSGGNGFFLGVNN
Ga0256823_101372723300026350SedimentFTHSACATSHKNQLPTDTAYSESAVTDFDTQWKKEEREWLLMVFIVLGLAVVLGASISAASGGNGFFLGINR
Ga0256818_100093413300026353SedimentMNRKALALFVAIIFLFTHSACATSHKNQLPTDTAYSESAVTDFDTQWKKEEREWLLMVFIVLGLAVVLGASISAASGGNGFFLGINR
Ga0256817_100421623300026373SedimentMNRKALALFVAIIFLFTHSGCATSHKNQIPTDTAYSENAVTDFDTQWKKDEREWLLMVFIVLGLAVVLGASISAASGGNGFFLGINR
Ga0256803_101116423300026375SedimentMNRKALALFVAIIFLFTHSGCATSHKNQIPTDTAYSENAVTDFDTQWKKDEREWLLMVFIVLGLAVVLGASISAASGGNG
Ga0209286_101523923300027713Freshwater SedimentMNTKTLALVIAIIFLITHSGCATLNKGQMQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
(restricted) Ga0255054_1013081733300027856SeawaterMKLKPLALLVAIIFLVTHSGCASVNKNQMQTTTAYSENPIADFDTQMKKDQREWLLMVLIVLGIAIAVGATISAASGGHGFIIGLNN
Ga0209397_1015970113300027871WetlandMGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNN
Ga0209293_1002900523300027877WetlandMAIIFLLTHSGCATLNKNQIQTDTAYSENAVTDFDTQWKKEEREWLLMVLIVLGFAIVLGASISASSGGNGFFLGINN
Ga0209293_1002964423300027877WetlandMNSKTLALVVAIIFLLTQSGCATLNKSQIQTNYPYPENPVIDFDTKWKKDEREWMLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0209293_1004539533300027877WetlandMNTRALALFMAIIFLLTHSGCATLNKNQMQTNTAYSENPVADFDTKWKKDEREWLLMVLIVLGFAIVLGASISASSGGDGFFLGINK
Ga0209293_1017238523300027877WetlandMNMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0209450_1020317943300027885Freshwater Lake SedimentMKSKILTLVVAVIFLLTQIGCATLNKNQMQPNSESAVGDFDSKWKKDEQEWLLMVLIVLGVAVVFGAAISASSGGNGFSLGINQ
Ga0209450_1057124223300027885Freshwater Lake SedimentMKYKTLALVVAIIFLVTHSGCASVNKNHIQTTTAYSENPVADFDTQKKKDEKEWLLMVLMVLGIGIVLGAAISASSGGNGFFLGVNN
Ga0208980_1012290623300027887WetlandMKLKTLASVVAIIFLLTHSGCASVNKNQMQTTTAYSENPVADFDTQMKKNEREWLLMALIVLGISIALGATISAGWVFVGNK
Ga0208980_1039529713300027887WetlandMNSKTLALLMAIIFLLTHSGCATLNKGQMQTDTAYTENTMSDWDTQWKKEEKEWLLMVLIVLGVAIVLGATISAAAGGNGLFIGVNK
Ga0208980_1048677113300027887WetlandMNTKTLALVVAIIFLLTHSGCATLNKSQMQTNPAYSENPVADFDAKWKKDEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGVNN
Ga0208980_1085478023300027887WetlandMRALALVMAIIFLLTHSGCATLNKSQLQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGVFLGINN
Ga0209254_1003218843300027897Freshwater Lake SedimentMNMRALALVMAIIFLLTHSGCATLNKSQMQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0209254_1023285913300027897Freshwater Lake SedimentMELKTLALVVAVIFLLTHSGCASVNKNQMQTTTAYSENPVADFDTQMKKNEREWLLMALVVLGISIALGATISAGWVFLGNK
Ga0209254_1036537713300027897Freshwater Lake SedimentMKLKTLALVVAIIFLLTHSGCASVNKNQMQTNTAYSENPVADFDTKMKKDQREWLLMALIVLGIAIALGATISASSGGNGFFLGINN
Ga0209254_1052276623300027897Freshwater Lake SedimentMNTKTLALVIAIIFLLTHSGCATLNKSQLQTNTAYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0209668_1064017723300027899Freshwater Lake SedimentMRALALVMAIIFLLTHSGCATLNKSPLQTNSAYSENPAADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0209253_1020224313300027900Freshwater Lake SedimentMKLKTLALVVAIIFLLTHSGCASVNKNQMQTTTAYSENPVADVDTQMKKNEREWLLMALIVLGIAIALGATISASSGGNGFFLGINN
Ga0209705_1043547523300027979Freshwater SedimentMGPMRVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPVADFDTQMKKEEKEWMLMVLIVLGIAIAVGASIFASSGGDGFVMGVNK
Ga0307380_1059980123300031539SoilMNSKTSALVMAIIFLLTHGGCATLNTSQMQTNSPYPENSVADFDTKWKKDEREWLLMVLIVLGFAIVLGATISASSGGDGFFLGINN
Ga0307379_1015060043300031565SoilMNMRALALLMAIIFLLTHSGCATLNKSQLQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0307378_1031535933300031566SoilMRALALLMAIIFLLTHSGCATLNKSQLQTNTAYSENPLADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0307376_1026594023300031578SoilMNMRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0315291_1048430923300031707SedimentMRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315288_1076730323300031772SedimentMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315290_1015664613300031834SedimentMNKKTLALVMAIIFLLTHSGCATLNKSQMQTNTAYSENPVADFDTQWKKEEREWLFMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315290_1017508123300031834SedimentMNKKTLALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315290_1086110913300031834SedimentRCGISEAVHEIRTVVNKDKGALTLVMAIIFLLTHSGCATLNKSQMQTNTAYSGNPLADFDTQWKKDEREWLLMVLIVLGFATVLGATISASSGGSGFFLGINN
Ga0315297_1012651023300031873SedimentMKLKTLALVVAIIFLLTQSGCASLNKNQMQTTTAYSENPVADFDTQMKKNQREWLLMALIVLGIAIALGATISAASGGNGFFLGVNN
Ga0315297_1028385833300031873SedimentKKTLALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315297_1065450913300031873SedimentMRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPVVDFDTQWKKEEREWLIMVLIVLGVAIVLGATISASSGGNGFFLGINN
Ga0315297_1069089923300031873SedimentMNKKTLALVMAIIFLLTHSGCATLNKNQMQTNTAYSEHTVTDWETQWKKEEREWLIAVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0315284_1183248513300032053SedimentMNKKTLALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAAVFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGF
Ga0315295_1019756123300032156SedimentMNMRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPAADFDTQWKKEEREWLLMVLIVLGFAVVLGATISASSGGNGFFLGINN
Ga0315286_1033453723300032342SedimentMNMRALALVMAIIFLLTHSGCATLNKSQMQTNTTYSENPVVDFDTQWKKEEREWLIMVLIVLGVAIVLGATISASSGGNGFFLGINN
Ga0315275_1048852313300032401SedimentMNIKTLALVMAIIFLLTHSGCATLNKNQMQTNTAYSEHTVTDWETQWKKEEREWLIAVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0315275_1115312023300032401SedimentMNMRALALVMAIIFLLTHSGCVTLNKSQMQTNTTYSENPVVDFDTQWKKEEREWLIMVLIVLGVAIVLGATISASSGGNGFFLGINN
Ga0316604_1008417963300033406SoilMGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKREEKEWMLMVLIVLGIAIAVGASISASSGGDGFVMGVNK
Ga0316619_1002443823300033414SoilMNSKTLALVVAIIFLLTQSGCATLNKSQIQTNSPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0316619_1019623823300033414SoilVIWSMSDHNPFDPFQYILVRENLMNRKALALVMAIIFLLTHSGCATLNKNQIQTDTAYSENAVTDFDTQWKKEEREWLLMVLIVLGFAIVLGASISASSGGNGFFLGINN
Ga0326726_1005380423300033433Peat SoilMKYKTLVLVVAIIFLLTHSGCASVNKNQVQTTTAYSENPLADFDTQKKKDEKEWLLMVLIVLGIGIVFGAAISASSGGDGFFLGINN
Ga0316613_1102650513300033434SoilIFLLTQSGCATLNKSQIQTNSPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0316600_1126680713300033481SoilMNSKTLALVVAIIFLLTQSGCATLNKSQIQTNSPYPENPVIDFDTKWKKDEREWMLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0316627_10269543523300033482SoilMRALALVMAIIFLLTHSGCATLNKSQMQTNTAYSENPVADFDTQWKKEEREWLLMVLIVLGFAIVLGATISASSGGNGFFLGINN
Ga0316629_1040929723300033483SoilLALVVAVMFLLTQSGCASLNKNQMQTSTAYAENPLADFDTQMKREEKEWMLMVLIVLGIAIAVGASISASSGGDGFVMGVNK
Ga0316626_1083560913300033485SoilMNMRALALVMAIIFLLTHSGCATLNKSQMQTNTPYPENPATDFDAKWKKDEREWLLMVAIVLGLAIVLGGTIAASSGGKGFFLGINN
Ga0316630_1175261713300033487SoilMGPMKVKILALAVTVMFLLTQSGCASLNKNQMQTSTAYSENSVADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNK
Ga0316628_10000112513300033513SoilLVMAIIFLLTQSGCATLNTSQMQTDTAYSEKRVPDFDTEWKKEEREWLLMVLIILGVAIAVGATIAISSGGGGFSMGVNN
Ga0316628_10100688723300033513SoilMNSKTLALVVAIIFLLTQMGCATLNTSQMQTNSPYPGNPVTDFDAKWKKDEREWLLMGAIVLGLAIVLGATISASSGGNGFF
Ga0316628_10145149123300033513SoilMNTRALALIMAIIFLLTQSGCATLNTSQMQTNTPYPDGTMADQGAQWKKEEKEWWLMVLIVLGIAIAVGATIAVSSGGGGFSMGVNN
Ga0316628_10190392913300033513SoilMNAKTLALVMAIIFLLTQSGCATINKSQMQTNTAYSEITVADFDTQRKKEEREWLLMVLIVLGVAIAVGATIAVSSGGGGFSMGVNN
Ga0316617_10066028413300033557SoilMNSKTLALVVAIIFLLTQSGCATLNKSQIQTNYPYPENPVIDFDTKWKKDEREWLLMVLIVLGFAIVLGGTIAASSGGNGFFLGINN
Ga0316617_10245438223300033557SoilMGPMKVKILALVVAVMFLLTQSGCASLNKNQMQTSTAYSENSVADFDTQMKKEEKEWMLMVLIVLGIALAVGATISASSGGNGFFMGVNN

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.