Metagenome / Metatranscriptome Family F101461

Basic Information
Family ID	F101461
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	76 residues
Representative Sequence	MSTTPPEQPVGSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLAILLLDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Number of Associated Samples	86
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.80 %
% of genes near scaffold ends (potentially truncated)	39.22 %
% of genes from short scaffolds (< 2000 bps)	86.27 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (78.431 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.490 % of family members)
Environment Ontology (ENVO)	Unclassified (28.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.020 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.12% β-sheet: 0.00% Coil/Unstructured: 45.88%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00903	Glyoxalase	38.24
PF00156	Pribosyltran	20.59
PF12681	Glyoxalase_2	5.88
PF00586	AIRS	1.96
PF00551	Formyl_trans_N	0.98
PF13522	GATase_6	0.98
PF09786	CytochromB561_N	0.98
PF01053	Cys_Met_Meta_PP	0.98
PF02769	AIRS_C	0.98
PF13537	GATase_7	0.98
PF02142	MGS	0.98
PF00578	AhpC-TSA	0.98
PF00892	EamA	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.98
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.98
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.98
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.98
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.98
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.98
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.98
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.98
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.98
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.43 %
Unclassified	root	N/A	21.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.43 %
Unclassified	root	N/A	21.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.43 %
Unclassified	root	N/A	21.57 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	63.73 %
Unclassified	root	N/A	21.57 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.73 %
Unclassified	root	N/A	21.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.86 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.57 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.86 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.86 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig252184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
2228664021\|ICCgaii200_c0680772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300000890\|JGI11643J12802_11197628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300000953\|JGI11615J12901_10344099	Not Available	663	Open in IMG/M
3300000956\|JGI10216J12902_109482812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300000956\|JGI10216J12902_110411165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300000956\|JGI10216J12902_110573593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	932	Open in IMG/M
3300000956\|JGI10216J12902_115401805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300000956\|JGI10216J12902_121967115	Not Available	500	Open in IMG/M
3300004114\|Ga0062593_101471982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300004114\|Ga0062593_101751594	Not Available	681	Open in IMG/M
3300004157\|Ga0062590_100707188	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300004463\|Ga0063356_105353063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300004479\|Ga0062595_100161994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
3300004480\|Ga0062592_101510822	Not Available	645	Open in IMG/M
3300005294\|Ga0065705_10178070	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300005332\|Ga0066388_100409875	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300005334\|Ga0068869_102039624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300005562\|Ga0058697_10393780	Not Available	685	Open in IMG/M
3300005563\|Ga0068855_100398819	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300005844\|Ga0068862_101310621	Not Available	726	Open in IMG/M
3300006196\|Ga0075422_10154029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300006581\|Ga0074048_13102838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300006845\|Ga0075421_101636864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300006852\|Ga0075433_10859650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300006871\|Ga0075434_101740998	Not Available	631	Open in IMG/M
3300006954\|Ga0079219_11251675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300007076\|Ga0075435_101670514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300009094\|Ga0111539_11452706	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300009098\|Ga0105245_10048723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3790	Open in IMG/M
3300009156\|Ga0111538_10678201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300009162\|Ga0075423_10249730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1858	Open in IMG/M
3300009789\|Ga0126307_10000171	All Organisms → cellular organisms → Bacteria	40424	Open in IMG/M
3300009840\|Ga0126313_10087862	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300009840\|Ga0126313_11473176	Not Available	565	Open in IMG/M
3300010039\|Ga0126309_10006827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4505	Open in IMG/M
3300010039\|Ga0126309_10043733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2108	Open in IMG/M
3300010039\|Ga0126309_10415388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	809	Open in IMG/M
3300010041\|Ga0126312_10362274	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300010041\|Ga0126312_11411757	Not Available	516	Open in IMG/M
3300010042\|Ga0126314_10621180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300010360\|Ga0126372_13268669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300010403\|Ga0134123_13537641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300011000\|Ga0138513_100068680	Not Available	546	Open in IMG/M
3300012204\|Ga0137374_10001080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30322	Open in IMG/M
3300012204\|Ga0137374_10004666	All Organisms → cellular organisms → Bacteria	16280	Open in IMG/M
3300012204\|Ga0137374_10009151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11700	Open in IMG/M
3300012208\|Ga0137376_11213280	Not Available	644	Open in IMG/M
3300012350\|Ga0137372_10029485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5041	Open in IMG/M
3300012496\|Ga0157353_1032449	Not Available	563	Open in IMG/M
3300012500\|Ga0157314_1023850	Not Available	644	Open in IMG/M
3300012941\|Ga0162652_100041726	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012941\|Ga0162652_100082059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300015077\|Ga0173483_10283850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300015371\|Ga0132258_13341949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1103	Open in IMG/M
3300015372\|Ga0132256_100045753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4044	Open in IMG/M
3300018000\|Ga0184604_10008731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2057	Open in IMG/M
3300018028\|Ga0184608_10035976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1888	Open in IMG/M
3300018067\|Ga0184611_1195944	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300018071\|Ga0184618_10128152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300019279\|Ga0184642_1157054	Not Available	658	Open in IMG/M
3300019767\|Ga0190267_10235713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	892	Open in IMG/M
3300019868\|Ga0193720_1033702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300019869\|Ga0193705_1078567	Not Available	639	Open in IMG/M
3300020059\|Ga0193745_1096764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300021078\|Ga0210381_10303697	Not Available	577	Open in IMG/M
3300021413\|Ga0193750_1018696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1678	Open in IMG/M
3300021510\|Ga0222621_1089402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300021951\|Ga0222624_1003032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300025935\|Ga0207709_10027239	All Organisms → cellular organisms → Bacteria	3290	Open in IMG/M
3300025938\|Ga0207704_10260798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1307	Open in IMG/M
3300027907\|Ga0207428_10790334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300028381\|Ga0268264_10890926	Not Available	893	Open in IMG/M
3300028587\|Ga0247828_10804919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300028592\|Ga0247822_10681273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300028705\|Ga0307276_10175883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300028705\|Ga0307276_10197647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300028713\|Ga0307303_10126241	Not Available	601	Open in IMG/M
3300028716\|Ga0307311_10046921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1142	Open in IMG/M
3300028717\|Ga0307298_10146289	Not Available	685	Open in IMG/M
3300028744\|Ga0307318_10290669	Not Available	572	Open in IMG/M
3300028754\|Ga0307297_10212639	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300028771\|Ga0307320_10389160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300028778\|Ga0307288_10305143	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300028787\|Ga0307323_10158145	Not Available	818	Open in IMG/M
3300028791\|Ga0307290_10385442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300028811\|Ga0307292_10089705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1198	Open in IMG/M
3300028811\|Ga0307292_10306273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300028824\|Ga0307310_10424747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300028828\|Ga0307312_10925549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300028828\|Ga0307312_10950126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300028881\|Ga0307277_10017116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2818	Open in IMG/M
3300028881\|Ga0307277_10123602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1110	Open in IMG/M
3300028885\|Ga0307304_10114281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1093	Open in IMG/M
3300030511\|Ga0268241_10032052	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300031092\|Ga0308204_10095679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300031720\|Ga0307469_11022848	Not Available	773	Open in IMG/M
3300031901\|Ga0307406_10618186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300031938\|Ga0308175_100477808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1320	Open in IMG/M
3300032174\|Ga0307470_10083767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1770	Open in IMG/M
3300032205\|Ga0307472_102268046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300034172\|Ga0334913_019879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.43%
Host-Associated	Host-Associated	21.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.59%
Plants	Host-Associated → Plants	21.57%
Aquatic	Environmental → Aquatic	7.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.84%
Sediment	Environmental → Aquatic → Sediment	4.90%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.94%
Phylloplane	Host-Associated → Plants → Phylloplane	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.94%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.94%
Loam	Environmental → Terrestrial → Soil → Loam	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.94%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.49%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_01585800	2124908045	Soil	MGMPTIASGARLPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWARASAFIGVAYLISRGIA
ICCgaii200_06807722	2228664021	Soil	MTSPPPEAPGGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLFDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
JGI11643J12802_111976281	3300000890	Soil	MPIPGNAEFAALVAIEIFLAILLFDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ*
JGI11615J12901_103440991	3300000953	Soil	RPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ*
JGI10216J12902_1094828122	3300000956	Soil	MSTTPPEQPTPPEQPEESRGSSRPTMGMPTISSGARMPIPGNAEFLFVVVLEIFLAILLFDDAWNVNDWALASTIIGVGYLISRGIAKASRVLEQ*
JGI10216J12902_1104111652	3300000956	Soil	MSTTPPEQPTGGTSRPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLFDDRWNANDWAFGTVVLGAAYLLSRGIAKASRVLEQ*
JGI10216J12902_1105735932	3300000956	Soil	MSTTPPEQPAGASGGTRPTMGMPTIGSGARMPIPGNAEFAFVVALEIFLAILLFDDAWNTNDWARASAFIGAAYLISRGIAKASRVLEH*
JGI10216J12902_1154018051	3300000956	Soil	MSTTPPEQPAGTTGSSRPTMGMPNFPTGARMPIPGNAEFLFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLCRGIAKASRVLEQ*
JGI10216J12902_1219671151	3300000956	Soil	MSTTPPEQPTTPQQRPGGPNVNFNLNALMPTPGNAELLVFVLIEIFLAILLLDDAWNVEDWAFGTIVLGAAYLLSRGIAKASRVLER*
Ga0062593_1014719821	3300004114	Soil	MSTTPPEQPVGSSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0062593_1017515941	3300004114	Soil	MPSIPSGARMPIPGNAEFAFVVALEIFLAILLLDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0062590_1007071882	3300004157	Soil	MSTTPPEQPVGSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLAILLLDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0063356_1053530632	3300004463	Arabidopsis Thaliana Rhizosphere	MSTTPPEPPVGSSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLAILLLDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0062595_1001619942	3300004479	Soil	MSTTPPEQPVGSSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLAILLLDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0062592_1015108221	3300004480	Soil	RMPIPGNAEFAFVVALEIFLAILLLDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0065705_101780701	3300005294	Switchgrass Rhizosphere	MTSPPPEAPGGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLFDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ*
Ga0066388_1004098753	3300005332	Tropical Forest Soil	MSTTPPEQPVGSRPSMGMPSIPSGARMPVPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0068869_1020396242	3300005334	Miscanthus Rhizosphere	MATTPPEQPAGSRPPMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0058697_103937802	3300005562	Agave	GSMARLPLPGNAEFAALIVFNIFLAILLLDDAWNADDWAFANVVLGAAYLLSRGIAKASRVLEA*
Ga0068855_1003988191	3300005563	Corn Rhizosphere	MATTPPEQPAGSRPPMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAA
Ga0068862_1013106211	3300005844	Switchgrass Rhizosphere	NLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0075422_101540292	3300006196	Populus Rhizosphere	MSTTPPEQPVGSSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLAILLLDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0074048_131028381	3300006581	Soil	METTPPEQPAGSRPPMGMPSIPSGARLPIPGNAEFAFVVALEIFLAILLFDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEH*
Ga0075421_1016368642	3300006845	Populus Rhizosphere	MSTTPPEQPVGSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0075433_108596502	3300006852	Populus Rhizosphere	MSTTPPEQPVGSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLAILLLDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0075434_1017409981	3300006871	Populus Rhizosphere	ARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0079219_112516752	3300006954	Agricultural Soil	MSTTPPEQPVGSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0075435_1016705141	3300007076	Populus Rhizosphere	MSTTPPEQPVGSSRPSMGMPSIPSGARMPIPGNAEFLFVVALEIFLAILLLDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0111539_114527062	3300009094	Populus Rhizosphere	MPIPGNAEFAFVVALEIFLALLLFDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0105245_100487232	3300009098	Miscanthus Rhizosphere	MPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0111538_106782013	3300009156	Populus Rhizosphere	MPIPGNAEFAFVVALEIFLAILLLDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0075423_102497302	3300009162	Populus Rhizosphere	MGMPSIPSGARMPIPGNAEFAFVVALEIFLAILLLDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0126307_1000017110	3300009789	Serpentine Soil	MPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ*
Ga0126313_100878622	3300009840	Serpentine Soil	MGMPNFPIGARLPIPGNAEFAFVVAIEIFLAILLFDDAWNTNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0126313_114731761	3300009840	Serpentine Soil	GARLPIPGNAEFAALVAIEIFLAILLFDDRWNANDWAFASTILGAAYLLSRGIAKASRVLEQ*
Ga0126309_100068273	3300010039	Serpentine Soil	MPIPGNAEFLFFVAIEIFLAILLLDDAWNVNDWASASMVLGAAYLLSRGVAKASRVLEQ*
Ga0126309_100437332	3300010039	Serpentine Soil	MPIPGNAEFGALVLIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ*
Ga0126309_104153882	3300010039	Serpentine Soil	MSTTPPEQTGGTTGPSRTTIGMPSISSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0126312_103622742	3300010041	Serpentine Soil	MTTTPPEQPGGSRPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNNWALASTILGAAYLLSRGIAKASRVLEQ*
Ga0126312_114117571	3300010041	Serpentine Soil	GMPNFPTGARLPIPGNAEFAFVVAIEIFLAILLFDDAWNTNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0126314_106211803	3300010042	Serpentine Soil	MPIPGNAEFAALVAIEIFLAILLLDDAWNVNNWALASTILGAAYLLS
Ga0126372_132686692	3300010360	Tropical Forest Soil	MGMPSIPSGARMPVPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0134123_135376412	3300010403	Terrestrial Soil	MPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAK
Ga0138513_1000686802	3300011000	Soil	PEQPAGSRPQMGIPNLPAGARLPILGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0137374_1000108021	3300012204	Vadose Zone Soil	MGMRSIPSGARLPIPGNAEFAFFVAIEIFLAILLFDDAWNVNDWAFASVILGGAYLFSRGIAKASRVLEH*
Ga0137374_1000466612	3300012204	Vadose Zone Soil	MGMPSIPSGARLPIPGNAEFAFVIALEIFLAILLLDDAWNANDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0137374_1000915112	3300012204	Vadose Zone Soil	MPIPGNAEFAALIAIEIFLAILLFDDRWNVENWAFATVVLGAAYLLSRGIAKASRVLEQ*
Ga0137376_112132801	3300012208	Vadose Zone Soil	PTMGMPSIPSGARMPIPGNAEFGALVLIEIFLAILLLDDAWNVNDWAFASTILGAAYLLSRGIAKASRVLEQ*
Ga0137372_100294852	3300012350	Vadose Zone Soil	MSTTPPEQPGGSTRPTMGMPSIPSGARMPIPGNAEFAALIAIEIFLAILLFDDRWNVENWAFATVVLGAAYLLSRGIAKASRVLEQ*
Ga0157353_10324491	3300012496	Unplanted Soil	PSMGMPSIPSGARMPSPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0157314_10238501	3300012500	Arabidopsis Rhizosphere	RMPIPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0162652_1000417262	3300012941	Soil	MGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0162652_1000820591	3300012941	Soil	MGIPNLPAGARLPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0173483_102838502	3300015077	Soil	MPIPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0132258_133419491	3300015371	Arabidopsis Rhizosphere	RPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0132256_1000457535	3300015372	Arabidopsis Rhizosphere	MGMPSIPSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ*
Ga0184604_100087313	3300018000	Groundwater Sediment	MTSPPPEAPGGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0184608_100359762	3300018028	Groundwater Sediment	MTSPPPEAPGGARPTMGMPSIPSGARMPIPGNAEFAALVAIGIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0184611_11959442	3300018067	Groundwater Sediment	MATTPPEQPAGSRPPMGIPNLPAGARLPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0184618_101281522	3300018071	Groundwater Sediment	MTTTPPEQPAGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLFDDAWNVNNWALASTILGAAYLLSRGIAKASRVLEQ
Ga0184642_11570541	3300019279	Groundwater Sediment	TMGMPSIPSGARMPIPGNAEFGALVLIEIFLAILLLDDAWNVNDWAFASTILGAAYLLSRGIAKASRVLEQ
Ga0190267_102357133	3300019767	Soil	MTTTPPEPPSRPTMGMPSIPSGARLPIPGNAEFAFFVAIEIFLAILLFDDAWNVENWALASTILGGAYLFSRGIAKASRVLEQ
Ga0193720_10337022	3300019868	Soil	MTSPPPEAPGGARPTMGMPSIPSGARLPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0193705_10785672	3300019869	Soil	MATTPPEQPAGSRPQMGIPNLPAGARLPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0193745_10967642	3300020059	Soil	MSSPPPEAPGGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0210381_103036972	3300021078	Groundwater Sediment	PMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0193750_10186962	3300021413	Soil	MSTTPPEQSGGTTGTSRPTMGMPSIPSGARMPIPGNAEFLFFVAIEIFLAILLLDDAWNVNDWASASMVLGAAYLLSRGVAKASRVLEQ
Ga0222621_10894021	3300021510	Groundwater Sediment	MATTPPEQPAGSRPPMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0222624_10030322	3300021951	Groundwater Sediment	MTSPPPEAPGGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAVYLLSRGIAKASRVLEQ
Ga0207709_100272391	3300025935	Miscanthus Rhizosphere	MATTPPEQPAGSRPPMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSR
Ga0207704_102607983	3300025938	Miscanthus Rhizosphere	MATTPPEQPAGSRPPMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0207428_107903342	3300027907	Populus Rhizosphere	MSTTPPEQPVGSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0268264_108909261	3300028381	Switchgrass Rhizosphere	MPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0247828_108049191	3300028587	Soil	MTSPPPEAPGEARSTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLFDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0247822_106812733	3300028592	Soil	MTSPPPEAPGGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLFDDAWNVNDWAFASVILGAAY
Ga0307276_101758832	3300028705	Soil	MSTTPPEQSGGTTGTSRPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSR
Ga0307276_101976472	3300028705	Soil	MSTTPPEQPGGSTRPTMGMPSIPSGARMPIPGNAEFAALVALEIFLAILLLDDRWNANDWAFGTVILGAAYLLSRGIAKASRVLEQ
Ga0307303_101262412	3300028713	Soil	SGGTTGTSRPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0307311_100469212	3300028716	Soil	PSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0307298_101462892	3300028717	Soil	MPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0307318_102906691	3300028744	Soil	GARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0307297_102126392	3300028754	Soil	MTTTPPEQPAGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASTILGAAYLLSRGIAKASRVLEQ
Ga0307320_103891601	3300028771	Soil	MSTTPPEQPAGTTRHMGMPSIPSGARLPIPGNAEFAFVVALEIFLAILLLDDAWNANDWAFASTIVGAAYLLSRGIAKA
Ga0307288_103051432	3300028778	Soil	MATTPPEQPAGSRPQMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0307323_101581452	3300028787	Soil	PNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0307290_103854421	3300028791	Soil	MSTTPPEQPSSRPTMGMPSIPSGARLPIPGNAEFAFFVAIEIFLAILLLDDAWNVNDWAQWSAILGFAYLISRGIAKASRVLEQ
Ga0307292_100897051	3300028811	Soil	MATTPPEQPAGSRPQMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASR
Ga0307292_103062732	3300028811	Soil	PDESRARMSTTPPEQSGGTTGTSRPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0307310_104247472	3300028824	Soil	MSTTPPEQSGGTTGTSRPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLSRGIAKASRVLEQ
Ga0307312_109255491	3300028828	Soil	MTSPPPEAPGGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAYLLS
Ga0307312_109501261	3300028828	Soil	KESGMATTPPEQPAGSRPPMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0307277_100171162	3300028881	Soil	MSTTPPEQPGGSTRPTMGMPSIPSGARMPIPGNAEFAALVALEIFLAILLLDDQWNANDWAFGTVILGAAYLLSRGIAKASRVLEQ
Ga0307277_101236022	3300028881	Soil	EAGMSTTPPEQPGGSTRPTMGMPSIPSGARMPIPGNAEFAALVALEIFLAILLLDDRWNANDWAFGTVILGAAYLLSRGIAKASRVLEQ
Ga0307304_101142813	3300028885	Soil	MTSPPPEAPGGARPTMGMPSIPSGARMPIPGNAEFAALVAIEIFLAILLLDDAWNVNDWAFASVILGAAY
Ga0268241_100320522	3300030511	Soil	MSTTPPEQPSGSTGTSRPTITMPSISSGARMPIPGNAEFAFVVALEIFLAILLLDDAWNTNDWAFASTIVGAAYLISRGIAKASRVLEQ
Ga0308204_100956791	3300031092	Soil	MSTTPPEQPAGTTRHMGMPSIPSGARLPIPGNAEFAFVVALEIFLAILLLDDAWNANDWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0307469_110228482	3300031720	Hardwood Forest Soil	RPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNNWAFASTIVGAAYLLSRGIAKASRVLEQ
Ga0307406_106181861	3300031901	Rhizosphere	MSAPPPETPGGSRPTMTMPSIPSGARMPVPGNAEFLALVVIEIFLAILLLDDAWNTNDWAFASTILGAAYLLSRGIAKASRVLEQ
Ga0308175_1004778082	3300031938	Soil	MATTPPEQPAGTRPQMGIPNLPAGARMPIPGNAEFAFVIALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEH
Ga0307470_100837674	3300032174	Hardwood Forest Soil	MATTPPEQPAGSRPPMGIPNLPAGARMPIPGNAEFAFVVALEIFLAILLFDDAWNVNDWAFASTIVGAAYLLSRGI
Ga0307472_1022680462	3300032205	Hardwood Forest Soil	MSTTPPEQPVGSRPSMGMPSIPSGARMPIPGNAEFAFVVALEIFLALLLFDDAWNVNDWAFASTIVGAAYL
Ga0334913_019879_276_560	3300034172	Sub-Biocrust Soil	MSTTPPEHTGGTTGSTSAGTSRPTIGMPNIASGARMPIPGNAEFAFVVALEIFLAILLLDDAWNVNDWAFASTIVGAAYLLSRGIAKASRVLEQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101461

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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