Metagenome / Metatranscriptome Family F101526

Basic Information
Family ID	F101526
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	62 residues
Representative Sequence	LTGSLGFYEFDALYRLRPNISFALGYTATKATLDSRQTKTSGYFDFGSKGPEFFVRVAF
Number of Associated Samples	91
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.02 %
% of genes near scaffold ends (potentially truncated)	93.14 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Unclassified (60.784 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.706 % of family members)
Environment Ontology (ENVO)	Unclassified (23.529 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.980 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 52.87% Coil/Unstructured: 47.13%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00072	Response_reg	5.88
PF04253	TFR_dimer	2.94
PF00005	ABC_tran	0.98
PF00437	T2SSE	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
All Organisms	root	All Organisms	39.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
cellular organisms	root	All Organisms → cellular organisms	39.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.94 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.96 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.94 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	1.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.96 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.96 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	0.98 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.78 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.96 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.96 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	0.98 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10394405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	837	Open in IMG/M
3300001661\|JGI12053J15887_10305199	Not Available	777	Open in IMG/M
3300002245\|JGIcombinedJ26739_101041016	Not Available	704	Open in IMG/M
3300002245\|JGIcombinedJ26739_101189392	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300004080\|Ga0062385_10631672	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300004091\|Ga0062387_100545552	Not Available	819	Open in IMG/M
3300004092\|Ga0062389_104931103	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300005541\|Ga0070733_10494384	Not Available	818	Open in IMG/M
3300005541\|Ga0070733_10508515	Not Available	806	Open in IMG/M
3300005944\|Ga0066788_10087650	Not Available	762	Open in IMG/M
3300005994\|Ga0066789_10202854	Not Available	836	Open in IMG/M
3300006176\|Ga0070765_102118737	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300007258\|Ga0099793_10293908	Not Available	788	Open in IMG/M
3300009038\|Ga0099829_10865187	Not Available	750	Open in IMG/M
3300009088\|Ga0099830_11076212	Not Available	667	Open in IMG/M
3300009090\|Ga0099827_11559011	Not Available	575	Open in IMG/M
3300010343\|Ga0074044_10846822	Not Available	597	Open in IMG/M
3300010869\|Ga0126359_1121007	Not Available	530	Open in IMG/M
3300010880\|Ga0126350_11286635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1970	Open in IMG/M
3300011270\|Ga0137391_10514623	Not Available	1012	Open in IMG/M
3300012205\|Ga0137362_10372480	All Organisms → cellular organisms → Bacteria → Proteobacteria	1237	Open in IMG/M
3300012349\|Ga0137387_11126763	Not Available	558	Open in IMG/M
3300012929\|Ga0137404_10158083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1891	Open in IMG/M
3300012944\|Ga0137410_11683791	Not Available	557	Open in IMG/M
3300013832\|Ga0120132_1111079	Not Available	582	Open in IMG/M
3300014498\|Ga0182019_11369657	Not Available	524	Open in IMG/M
3300015193\|Ga0167668_1048573	Not Available	893	Open in IMG/M
3300015193\|Ga0167668_1052533	Not Available	849	Open in IMG/M
3300015206\|Ga0167644_1090867	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300015245\|Ga0137409_11495082	Not Available	523	Open in IMG/M
3300019889\|Ga0193743_1227331	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300020034\|Ga0193753_10167254	All Organisms → cellular organisms → Bacteria → Proteobacteria	1034	Open in IMG/M
3300020034\|Ga0193753_10383346	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300020579\|Ga0210407_10487724	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300020582\|Ga0210395_11013208	Not Available	615	Open in IMG/M
3300021404\|Ga0210389_10090728	All Organisms → cellular organisms → Bacteria → Proteobacteria	2349	Open in IMG/M
3300021405\|Ga0210387_10837266	Not Available	812	Open in IMG/M
3300021406\|Ga0210386_10406287	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174	Open in IMG/M
3300021406\|Ga0210386_10617435	Not Available	936	Open in IMG/M
3300021407\|Ga0210383_11350687	Not Available	594	Open in IMG/M
3300021432\|Ga0210384_10296306	All Organisms → cellular organisms → Bacteria → Proteobacteria	1456	Open in IMG/M
3300021475\|Ga0210392_10758283	Not Available	724	Open in IMG/M
3300021478\|Ga0210402_11966330	Not Available	511	Open in IMG/M
3300022711\|Ga0242674_1067889	Not Available	518	Open in IMG/M
3300022721\|Ga0242666_1112449	Not Available	639	Open in IMG/M
3300024288\|Ga0179589_10460464	Not Available	587	Open in IMG/M
3300025463\|Ga0208193_1011928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2630	Open in IMG/M
3300025627\|Ga0208220_1129387	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300025633\|Ga0208480_1078610	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300026215\|Ga0209849_1045347	Not Available	767	Open in IMG/M
3300026320\|Ga0209131_1163014	Not Available	1107	Open in IMG/M
3300026557\|Ga0179587_10192476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1289	Open in IMG/M
3300026557\|Ga0179587_10212629	Not Available	1228	Open in IMG/M
3300027737\|Ga0209038_10141704	Not Available	728	Open in IMG/M
3300027867\|Ga0209167_10276239	Not Available	906	Open in IMG/M
3300027895\|Ga0209624_10476817	Not Available	831	Open in IMG/M
3300027908\|Ga0209006_10502312	Not Available	1011	Open in IMG/M
3300028779\|Ga0302266_10207781	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300028789\|Ga0302232_10296274	Not Available	799	Open in IMG/M
3300028806\|Ga0302221_10286514	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300028906\|Ga0308309_11024192	Not Available	715	Open in IMG/M
3300029882\|Ga0311368_10961336	Not Available	567	Open in IMG/M
3300029883\|Ga0311327_10628750	Not Available	642	Open in IMG/M
3300029910\|Ga0311369_11006697	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300029943\|Ga0311340_10425085	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
3300029944\|Ga0311352_10013514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	8280	Open in IMG/M
3300029951\|Ga0311371_10045529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	7546	Open in IMG/M
3300030020\|Ga0311344_11047810	Not Available	631	Open in IMG/M
3300030053\|Ga0302177_10041807	All Organisms → cellular organisms → Bacteria → Proteobacteria	2817	Open in IMG/M
3300030399\|Ga0311353_10962228	Not Available	717	Open in IMG/M
3300030524\|Ga0311357_11231466	Not Available	646	Open in IMG/M
3300030528\|Ga0210277_10658551	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300030618\|Ga0311354_10325650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1579	Open in IMG/M
3300030693\|Ga0302313_10321070	Not Available	617	Open in IMG/M
3300030760\|Ga0265762_1097178	Not Available	649	Open in IMG/M
3300030760\|Ga0265762_1134829	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300030776\|Ga0075396_1794078	Not Available	530	Open in IMG/M
3300030862\|Ga0265753_1018839	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M
3300030878\|Ga0265770_1159704	Not Available	500	Open in IMG/M
3300031057\|Ga0170834_104352961	Not Available	681	Open in IMG/M
3300031090\|Ga0265760_10370362	Not Available	514	Open in IMG/M
3300031231\|Ga0170824_125809199	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300031234\|Ga0302325_10681656	All Organisms → cellular organisms → Bacteria → Proteobacteria	1487	Open in IMG/M
3300031446\|Ga0170820_10116913	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300031469\|Ga0170819_16116190	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300031708\|Ga0310686_105002726	All Organisms → cellular organisms → Bacteria → Proteobacteria	1488	Open in IMG/M
3300031708\|Ga0310686_111522856	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300031715\|Ga0307476_10222663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1373	Open in IMG/M
3300031715\|Ga0307476_11076979	Not Available	591	Open in IMG/M
3300031718\|Ga0307474_10466395	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300031754\|Ga0307475_10647905	Not Available	844	Open in IMG/M
3300031754\|Ga0307475_11247981	Not Available	577	Open in IMG/M
3300031837\|Ga0302315_10590522	Not Available	594	Open in IMG/M
3300031962\|Ga0307479_12124968	Not Available	509	Open in IMG/M
3300033755\|Ga0371489_0303790	Not Available	769	Open in IMG/M
3300033822\|Ga0334828_143530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	555	Open in IMG/M
3300033887\|Ga0334790_133394	Not Available	764	Open in IMG/M
3300034163\|Ga0370515_0344994	Not Available	629	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.12%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.51%
Peat	Environmental → Terrestrial → Peat	19.61%
Freshwater	Environmental → Aquatic → Freshwater	5.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.61%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.94%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.94%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.96%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103944052	3300001593	Forest Soil	AVDHLDGSLGFYELAGLYRFRPNVSFALGYTAAKAALTSRQTRTSGHFDFDSKGPELFVRVAF*
JGI12053J15887_103051991	3300001661	Forest Soil	TGSLGFYEFAALYRLRANVSFAVGYTEVKTTLVSRQPSTSGRFDFSSKGPEAFVRIAF*
JGIcombinedJ26739_1010410162	3300002245	Forest Soil	VRVDDLDGSLGLYELDALYRLRPNISFALGYSMLRASLVSAQVKQAGFFNFDSKGPEFLVRVAF*
JGIcombinedJ26739_1011893921	3300002245	Forest Soil	KVSIDHDTGSLGIYELDALYRLRPNVSFAVGYTAVKAILDSRKPGESGRFDFDTKGPEVFVRVAF*
Ga0062385_106316721	3300004080	Bog Forest Soil	IYELDALYRLRPNVSFALGYTAVKAILDSRKPGESGRFDFDTKGPEVFVRVAF*
Ga0062387_1005455522	3300004091	Bog Forest Soil	LDARAQYFRAAVDHLTGSQGFYELAALYRLRPNVSFALGYTAATADLESRQTNNSGYLNFDSKGPEFFVRVAF*
Ga0062389_1049311032	3300004092	Bog Forest Soil	YFDGRAQYLKVRVDDLDGSLGIYELDALYRLRPNISFALGYTIFRASLLSAQAKQSGFFNFDSKGPEFIVRVAF*
Ga0070733_104943842	3300005541	Surface Soil	SLGIYELDALYRLRPNISFALGYTMLRASLVSAQPKQSGFFNFNSKGPEFFVRIAF*
Ga0070733_105085152	3300005541	Surface Soil	SKRFYLDGRAQYFRLAVDHLTGSLGFYEFAALYRLRPNISFALGYTEVKAILDSRQTRTAGRFDFNTKGPEFFVRVAF*
Ga0066788_100876501	3300005944	Soil	HLSGTLTFYEAAALYRLRPNISFALGYTAAKADLASRQTTNAGFFDFNTRGPEFFVRIAF
Ga0066789_102028542	3300005994	Soil	FKLAVDHLSGTLTFYEAAALYRLRPNISFALGYTAVKADLASRQTTNSGFFDFNTKGPEFFVRIAF*
Ga0070765_1021187371	3300006176	Soil	LDGLYRVTPNVSFALGYTAVKAHLASTKTSEAGLFDFDSKGPELFIRVAF*
Ga0099793_102939081	3300007258	Vadose Zone Soil	AQYFKLNVDHLSGSLGFYELAALYRLRPNISFALGYTDIKATLTSRQPRTSGRFDFNSKGPEFFVRVAF*
Ga0099829_108651871	3300009038	Vadose Zone Soil	LAADHVDGSLGLYELAGLYRFRPNVSFALGYTMAKASLTSRQPGTSGHFDLDSKGPELFVRIAF*
Ga0099830_110762122	3300009088	Vadose Zone Soil	DHLSGSLGFYELAGLYRLRPNVSFALGYTAVKATLTSRQTRTSGQFDFNSKGPEFFVRVAF*
Ga0099827_115590112	3300009090	Vadose Zone Soil	SLGFYELAGLYRLRPNISFALGYTAAKATLTSRQTRTSGRFDFDSKGPEFFVRIAF*
Ga0074044_108468221	3300010343	Bog Forest Soil	LEGSLGFFEFDALYRFRPNVSFALGYSGTRAQLSSTQTTSGGFFDFNAKGPEFFVRVAF*
Ga0126359_11210072	3300010869	Boreal Forest Soil	ALYRLRPNISFALGYTATKATLDSRQTKTSGYFDFGSKGPEFFVRIAF*
Ga0126350_112866353	3300010880	Boreal Forest Soil	LTGSLGFYEFDALYRLRPNISFALGYTATKATLDSRQTKTSGYFDFGSKGPEFFVRVAF*
Ga0137391_105146231	3300011270	Vadose Zone Soil	LAALYRLRPNISFALGYTDIKATLTSRQPRTSGQFDFSSKGPEFFVRVAF*
Ga0137362_103724802	3300012205	Vadose Zone Soil	FDARAQYFRVRVDDLDGSLGIYEVDGLYRLRPNISFAVGYSSLRARLTSAQPKQGGFFNFNSSGPEIFVRVAF*
Ga0137387_111267632	3300012349	Vadose Zone Soil	DGRAQYFKLNVDHLSGSLGFYELAALNRLRPNISFALGYTDIKATLTSRQPRTSGQFDFSSKGPEFFVRVAF*
Ga0137404_101580833	3300012929	Vadose Zone Soil	VDDLDGSLGIYEVDGLYRLRPNISFAVGYSSLRARLTSAQPKQGGYFNFNSSGPEIFVRVAF*
Ga0137410_116837912	3300012944	Vadose Zone Soil	RAQYFRLTVDHLTGSLGFYELAGLYRLRTTISFALGYTAAKATLASRQTRTSGRFDFDAKGPEFFVRIAF*
Ga0120132_11110791	3300013832	Permafrost	VLGAQYFKVHINNLDGSLGIYELDALYRLRPNISFALGYTSLRAHLDSTQTKQSGTFDFNSSGPEFFVRVAF*
Ga0182019_113696572	3300014498	Fen	DVRAQYFKLSVDQLDGSLTFYELAALYRLRPNVSFALGYNSVKAELTSLQTKNAGFFNFDTKGPEFFVRIAF*
Ga0167668_10485731	3300015193	Glacier Forefield Soil	ALYRLRPNISFALGYTAAKANLNSRQTKNSGYFNFVSKGPEVFVRIAF*
Ga0167668_10525331	3300015193	Glacier Forefield Soil	KAAVNHLTGTLGFYEFDVLYRLRPNVAFALGYTATKATLESRQTGTSGNFDFSSKGPEFFVRIAF*
Ga0167644_10908672	3300015206	Glacier Forefield Soil	IYELDALYRLRPNISFALGYSMFKASLISAQTKQSGSFNFNSKGPEFFVRIAF*
Ga0137409_114950821	3300015245	Vadose Zone Soil	LTGSLGFYELAGLYRLRPNISFALGYTAAKATLASRQTRTSGRFDFDAKGPEFFVRIAF*
Ga0193743_12273311	3300019889	Soil	LRVRINDLDGSLGIYEVDGVYRLRPNIAFAVGYSSLRARLTSAQPKQGGFFNFNSSGPEIFVRVAF
Ga0193753_101672542	3300020034	Soil	DLDGSLGIYELDGLYRLRPNISFAVGYSSLRARLTSAQARQGGMFNFNSSGPEIFVRVAF
Ga0193753_103833462	3300020034	Soil	RAQYLRVRINDLDGSLGLYEVDALYRLRPNISFAVGYSSLRARLTSEQAKQAGFFNFNSSGPQVFVRVAF
Ga0210407_104877242	3300020579	Soil	IDDIDGSLGLYEVDGLYRLRPNISFAVGYSSLRANLTSAQARQGGVFNFNSSGPEIFVRVAF
Ga0210395_110132082	3300020582	Soil	QYLKVRVDHLDGSLGIYELDALYRLRPNISFALGYSILRADLVSRQTKQAGFFDFNSKGPEFFVRIAF
Ga0210389_100907281	3300021404	Soil	ELDALYRLRPNISFALGYTVFRANLTSNQARQSGFFNFNSKGPEFFLRVAF
Ga0210387_108372662	3300021405	Soil	DHLTGSLGIYEFDALYRLRPNISFALGYTATKATLDSRQTRTSGRFDFESKGPEFFVRIA
Ga0210386_104062871	3300021406	Soil	SKRFYLDGRAQYVKVRVDDLDGSLGIYELSALYRLRPNISFALGYSMLRASLTSAQVKQAGFFNIDSKGPEFFVRVAF
Ga0210386_106174352	3300021406	Soil	YRFRPNLSFALGYTMAKATLTSRQSGTSGHFDFDSKGPEFFVRVAF
Ga0210383_113506871	3300021407	Soil	YELDGLYRLRPNISFALGYTMLRASLLSAQVKQAGYFNFNSKGPEFFVRIAF
Ga0210394_110644551	3300021420	Soil	RPNVSFALGYTDTKATLDSRQTRTSGYFVFVSKGPEFFVRVAF
Ga0210384_102963061	3300021432	Soil	EFAALYRLRPNISFALGYTDVKATLTSRQSRTSGQFDFNSKGPEFFVRVAF
Ga0210392_107582832	3300021475	Soil	FAGLYRLRSNISFAVGYTMAKATLTSRQPRTSGHFDFDSKGPEFFVRIAF
Ga0210402_119663302	3300021478	Soil	YFKLAVDHLTGSLGFYEAAALYRLRPNIAFAIGYTATKAVLDSRQIRNSGYFYLDTKGPELFVRVAF
Ga0242674_10678892	3300022711	Soil	QYFKLSVDHLTGTVEYYEFAALYRYRPNVSFALGYTSAKADIDSRQTKTSGYFDLNSKGPEAFFRVAF
Ga0242666_11124492	3300022721	Soil	FYLDGRAQYFKLSVDHLTGTVEYYEFAALYRYRPNVSFALGYTSAKADIDSRQTKTSGYFDLNSKGPEAFFRVAF
Ga0179589_104604642	3300024288	Vadose Zone Soil	LGFYELAGLYRLRPNISFALGYTAAKATLASRQTRTSGRFDFDAKGPEFFVRIAF
Ga0208193_10119281	3300025463	Peatland	SLGIYELDALYRLRPNISFALGYTSLRAHLASTQTTQAGLFNFNSSGPELFLRVAF
Ga0208220_11293872	3300025627	Arctic Peat Soil	QYLKVQIDDLDASLGIYEFDALYRLRPNISFALGYSMLRANLISAQAKQAGFFNLDTKGPEFFVRVAF
Ga0208480_10786101	3300025633	Arctic Peat Soil	QYMKVRIDDLDASLGIYEFDALYRLRPNISFALGYSMLRANLLSAQAKQAGFFNLDSKGPEFFVRVAF
Ga0209849_10453471	3300026215	Soil	DHLSGTLTFYEAAALYRLRPNISFALGYTAAKADLASRQTTNAGFFDFNTRGPEFFVRIA
Ga0209131_11630141	3300026320	Grasslands Soil	RFYLDGRAQYFKLNVDHLSGSLGFYELAALYRLRPNISFALGYTDIKATLTSRQPRTSGRFDFNSKGPEFFVRVAF
Ga0179587_101924761	3300026557	Vadose Zone Soil	AQYLKVNINNLDGSLGIYELDGLYRLRPNISFALGYTSVRAHLTSTQPRQSGLFNFNSSGPEIFVRIAF
Ga0179587_102126291	3300026557	Vadose Zone Soil	HLSGSLGFYELAALYRLRPNISFALGYTDIKATLTSRQPRTSGQFDFSSKGPEFFVRVAF
Ga0209038_101417041	3300027737	Bog Forest Soil	VISKRFYVDGRAQYLKVRADDIDGTLGIYEFDALYRLRPNISFALGYSMFRVNVLSSQTRQAGYFDFHSQGPEAFLRVAF
Ga0209167_102762391	3300027867	Surface Soil	VDDLDGSLGIYELDALYRLRPNISFALGYTMLRASLVSAQPKQSGFFNFNSKGPEFFVRIAF
Ga0209624_104768171	3300027895	Forest Soil	HLTGTLGFYEFDALYRLRPNISFALGYTATKATLASRQTTTSGYFDFSSKGPEFFVRIAF
Ga0209777_107136822	3300027896	Freshwater Lake Sediment	LGVHIDHLDGSLGFFELDALYRFRPNVSFALGYNGVKANLSSTQTSNAGLFNFSTKGPELFVRVAF
Ga0209415_111209292	3300027905	Peatlands Soil	SLGFFELDALYRFRPNVSFALGYNAVKANVSSTQTSNAGLFNISTKGPELFVRVAF
Ga0209006_105023122	3300027908	Forest Soil	FKVAIDHLDGSLGFYEFDALYRLRPNVSFALGYTATKAILDSRKPGNSGYFAFDSKGPELFVRVAF
Ga0302266_102077812	3300028779	Bog	ARAQYFKLAVDHLTGSLGFYEADVIYRLRPNISFALGYTAAKATLDSRQNNNSGFFDFDSRGPEFFVRVAF
Ga0302232_102962741	3300028789	Palsa	DALYRFRPNVSFALGYTAAKADLSSQKPSNSGYFDVDSKGPEFFVRVAF
Ga0302221_102865141	3300028806	Palsa	HVHNLEGSLGFLDVDVLYRFRPNVSFAVGYDKVKASLSSTQATSGGYFDFNSGGPEFFIRVSF
Ga0308309_110241922	3300028906	Soil	DALYRLRPNISFALGYSMLRASLVSAQVKQAGFFNFDSKGPEFLVRVAF
Ga0311368_109613361	3300029882	Palsa	FRPNVSFALGYTSTRADVSSTKQSNSGYFDFDSKGPEFFVRVAF
Ga0311327_106287502	3300029883	Bog	LAVDHLTGSLGFYEADVIYRLRPNISFALGYTAAKATLDSRQNNNSGFFDFDSRGPEFFVRVAF
Ga0311369_110066972	3300029910	Palsa	SMGIYELDALYRLRPNVSFALGYTAVKAILDSRKPGESGVFDFDTKGPEVFVRVAF
Ga0311340_104250852	3300029943	Palsa	LYYEFDAVYRLRPNISFALGYDAVQARLTSTQTSQAGYFNFNSKGPEFFVRVAF
Ga0311352_100135141	3300029944	Palsa	VLSKRFYLDARGEFMKVKADDLDGSLLYYEFDAVYRLRPNISFALGYDAVQARLTSTQTSQAGYFNFNSKGPEFFVRVAF
Ga0311371_100455298	3300029951	Palsa	ELDALYRFRPNVSFALGYTAAKADLSSQKPSNSGYFDVDSKGPEFFVRVAF
Ga0311344_110478102	3300030020	Bog	GRAQYFKVAVDHIEGSLGFYEVDALYRFRPTVSFALGYTATKVDLESQKQSNSGYVDLSSKGPEFFVRVAF
Ga0302177_100418071	3300030053	Palsa	FDGRAQYVKVRVDDLDGSLGIYELSALYRLRPNISFALGYSVLHASLVSAQVKQAGFFNFDSKGPEFFVRVAF
Ga0311353_109622281	3300030399	Palsa	LLYYEFDAVYRLRPNISFALGYDAVQARLTSTQTSQAGYFNFNSKGPEFFVRVAF
Ga0311357_112314661	3300030524	Palsa	VKADDLDGSLLYYEFDAVYRLRPNISFALGYDAVQARLTSTQTSQAGYFNFNSKGPEFFVRVAF
Ga0210277_106585512	3300030528	Soil	VEYYEFAALYRYRPNISFALGYTSAKADIDSRQTKTSGYFDLNSKGPEAFFRVAF
Ga0311354_103256502	3300030618	Palsa	GFYELDALYRFRPNVSFALGYTAAKADLSSQKPSNSGYFDVDSKGPEFFVRVAF
Ga0302313_103210702	3300030693	Palsa	GRAQYFKIAVDQVDGSVGIYEFDVLYRLRPNVSFALGYTSTRADISSRQTTNAGYFDFDTKGPEFFVKVAF
Ga0265762_10971781	3300030760	Soil	RAQYVKVRVDDLDGSLGLYELDALYRLRPNISFALGYSMLRASLVSAQVKQAGFFNFDSKGPEFLVRVAF
Ga0265762_11348292	3300030760	Soil	TGTVEYYEFAALYRFRPNISFALGYTSAKADVDSRQTKTSGYFDLNSKGPEAFVRVAF
Ga0075396_17940782	3300030776	Soil	YFRVHIDDIDGSLGIYELDALYRLRANISFALGYTSVRAHLASTQVRQSGLFNFNSSGPEIFLRVAF
Ga0265753_10188391	3300030862	Soil	IYELDGLYRLRPNISFAVGYSSLRAHLFSAQPRQGGLFNFNSSGPEVFVRVAF
Ga0265770_11597042	3300030878	Soil	RAQYFKLSVDHLTGTVEYYEFAALYRYRPNISFALGYTSAKADVDSRQTKTSGYFDLNSKGPEAFVRVAF
Ga0170834_1043529611	3300031057	Forest Soil	IFCIILFFDHLTGSLGFYELDGLYRLRPNISFALGYTMAKASLDSRQTRTSGRFDFDSKGPEFFVRIAF
Ga0265760_103703621	3300031090	Soil	KVRVDDLDGSLGLYELDALYRLRPNISFALGYSMLRASLVSAQVKQAGFFNFDSKGPEFLVRVAF
Ga0170824_1258091991	3300031231	Forest Soil	KVRVDDLDGSLGIYEVDALYRLRPNISFALGYSMFRASLISAQTKQAGFFNFNSKGPELFVRVAF
Ga0302325_106816562	3300031234	Palsa	QYFKLNVDDISGSLGFYEFDALYRFRPNVSFALGYTAVKADVTSRQTKNAGYFDFDSKGPEFFVRVAF
Ga0170820_101169131	3300031446	Forest Soil	KRFYIDGRAQYLKVRVDSLDGTLGIYELDALYRLRPNVSFALGYSMFRANLISAQTKQAGFFSFNSKGPEFFVRISF
Ga0170820_142710821	3300031446	Forest Soil	ALYRLRPNISFALGYSMFRASLISAQTKQAGFFNFNSKGPELFVRVAF
Ga0170819_161161902	3300031469	Forest Soil	LDGSLGIYELDALYRLRPNVSFALGYSMFRANLTSRQTKQAGFFSFNSKGPEFFVRIAF
Ga0310686_1050027262	3300031708	Soil	FYLDARAQYFKAAVDHLTGSLGIYEFDALYRLRPNISFALGYTATKATLVSRQTRTSGYFDFGSKGPEFFVRIAF
Ga0310686_1115228561	3300031708	Soil	VEYYEFAALYRFRPNISFALGYTSAKADVDSRQTKTSGYFDLNSKGPEAFVRVAF
Ga0307476_102226632	3300031715	Hardwood Forest Soil	RAQYFKAAVDHLTGSLGFYEFDALYRLRANISFALGYTATKATLDSRQTKTSGYFDFGSKGPEFFVRIAF
Ga0307476_110769791	3300031715	Hardwood Forest Soil	ELDALYRLRPNISFALGYSMFKASLVSAQTKQSGFFDFNSKGPEFFVRIAF
Ga0307474_104663952	3300031718	Hardwood Forest Soil	RVDDLDGSLGIYELDGLYRLRPNISFAVGYTSLRAHLTSAQVRQAGFFNFNSSGPEIFLRVAF
Ga0307475_106479052	3300031754	Hardwood Forest Soil	LNVDHLSGSLGFYEFAALYRLRPNISFALGYTDVKATLDSRQIRTAGRFDFTSKGPEFFVRVAF
Ga0307475_112479812	3300031754	Hardwood Forest Soil	GTVSFYEGAALYRLRPNISFALGYTAARVDVSSRQPKTSGYFDLESRGPEAFVRIAF
Ga0302315_105905222	3300031837	Palsa	VRVDDLDGSLGIYELSALYRLRPNISFALGYSVLHASLVSAQVKQAGFFNFDSKGPEFFVRVAF
Ga0307479_121249682	3300031962	Hardwood Forest Soil	YLDGRAQYFKVNIDHLSGSLGFYELAGLYRLRPNVSFALGYTEVKAALTSRQRRTSGQFDFNSKGPEFFVRVAF
Ga0371489_0303790_1_213	3300033755	Peat Soil	RADYLRLAIDHVTGSVGFYELAGLYRFRPNVSFALGYTEIKVDLDSRQGTNTGYFDFTTKGPELFVRVAF
Ga0334828_143530_3_221	3300033822	Soil	DARAQYFKIAVDHLDGSLGFYEAAALYRYRPNVSFALGYTSAKADLASRQTTKAGYFDFATKGPEFFVRVAF
Ga0334790_133394_3_194	3300033887	Soil	AVDHLDGSLTFYEAAALYRYRPNVSFALGYTSAKADLASRQTTKSGYFDFDTKGPELFVRIAF
Ga0370515_0344994_2_202	3300034163	Untreated Peat Soil	MKISVNDLDGSLLYYEVDAVYRLRPNISFALGYDAVQARLTSTQTSQAGFFNFNAKGPEFFVRVAF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101526

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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