Metagenome / Metatranscriptome Family F101575

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101575
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	81 residues
Representative Sequence	MGNESQESNGALGLIPALRARIARYREQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGAALYPTPRTSPVAGDD
Number of Associated Samples	73
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.51 %
% of genes near scaffold ends (potentially truncated)	34.31 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.902 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.274 % of family members)
Environment Ontology (ENVO)	Unclassified (36.275 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.824 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.70% β-sheet: 0.00% Coil/Unstructured: 51.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00072	Response_reg	17.65
PF13403	Hint_2	1.96
PF04964	Flp_Fap	0.98
PF13847	Methyltransf_31	0.98
PF01329	Pterin_4a	0.98
PF08669	GCV_T_C	0.98
PF00271	Helicase_C	0.98
PF14559	TPR_19	0.98
PF04519	Bactofilin	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.98
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.98
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
All Organisms	root	All Organisms	45.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
cellular organisms	root	All Organisms → cellular organisms	45.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	35.29 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	35.29 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	35.29 %
Rhodospirillales bacterium 39-66-50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10191342	Not Available	1361	Open in IMG/M
3300002245\|JGIcombinedJ26739_100107513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2617	Open in IMG/M
3300005177\|Ga0066690_10671987	Not Available	688	Open in IMG/M
3300005177\|Ga0066690_10883935	Not Available	572	Open in IMG/M
3300005454\|Ga0066687_10655348	Not Available	624	Open in IMG/M
3300005559\|Ga0066700_10292413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1147	Open in IMG/M
3300005576\|Ga0066708_10964982	Not Available	530	Open in IMG/M
3300005602\|Ga0070762_10443857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	843	Open in IMG/M
3300005921\|Ga0070766_10064586	All Organisms → cellular organisms → Bacteria → Proteobacteria	2091	Open in IMG/M
3300005921\|Ga0070766_10126662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	1541	Open in IMG/M
3300005921\|Ga0070766_10158178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1392	Open in IMG/M
3300005921\|Ga0070766_10829989	Not Available	631	Open in IMG/M
3300006176\|Ga0070765_100171768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1950	Open in IMG/M
3300006176\|Ga0070765_100432953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1231	Open in IMG/M
3300006176\|Ga0070765_100470925	Not Available	1178	Open in IMG/M
3300006176\|Ga0070765_100596914	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300006176\|Ga0070765_101586298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300006797\|Ga0066659_10833660	Not Available	766	Open in IMG/M
3300006800\|Ga0066660_11320964	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300007258\|Ga0099793_10209157	Not Available	937	Open in IMG/M
3300009012\|Ga0066710_102221744	Not Available	800	Open in IMG/M
3300009089\|Ga0099828_10314144	Not Available	1410	Open in IMG/M
3300011120\|Ga0150983_11489112	Not Available	589	Open in IMG/M
3300011120\|Ga0150983_11649588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300011269\|Ga0137392_10409443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1126	Open in IMG/M
3300011270\|Ga0137391_10273897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1459	Open in IMG/M
3300011270\|Ga0137391_10513593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1013	Open in IMG/M
3300011270\|Ga0137391_10804212	Not Available	775	Open in IMG/M
3300011271\|Ga0137393_10134191	All Organisms → cellular organisms → Bacteria	2053	Open in IMG/M
3300012189\|Ga0137388_11662705	Not Available	573	Open in IMG/M
3300012199\|Ga0137383_10385888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1026	Open in IMG/M
3300012200\|Ga0137382_10341581	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300012200\|Ga0137382_10382727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300012203\|Ga0137399_11265145	Not Available	621	Open in IMG/M
3300012204\|Ga0137374_10442520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1022	Open in IMG/M
3300012205\|Ga0137362_10985639	Not Available	718	Open in IMG/M
3300012208\|Ga0137376_10740724	Not Available	847	Open in IMG/M
3300012211\|Ga0137377_10469502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1197	Open in IMG/M
3300012211\|Ga0137377_11624874	Not Available	570	Open in IMG/M
3300012353\|Ga0137367_10328675	Not Available	1090	Open in IMG/M
3300012354\|Ga0137366_10202129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1484	Open in IMG/M
3300012360\|Ga0137375_10229883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1729	Open in IMG/M
3300012362\|Ga0137361_10664402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300012362\|Ga0137361_11120999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300012362\|Ga0137361_11617928	Not Available	568	Open in IMG/M
3300012363\|Ga0137390_10136648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2432	Open in IMG/M
3300012532\|Ga0137373_10138218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2072	Open in IMG/M
3300012582\|Ga0137358_11079933	Not Available	513	Open in IMG/M
3300012918\|Ga0137396_10255182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1294	Open in IMG/M
3300012918\|Ga0137396_10725100	Not Available	733	Open in IMG/M
3300012923\|Ga0137359_10708503	Not Available	877	Open in IMG/M
3300012925\|Ga0137419_11176312	Not Available	641	Open in IMG/M
3300012925\|Ga0137419_11194413	Not Available	637	Open in IMG/M
3300012925\|Ga0137419_11696306	Not Available	539	Open in IMG/M
3300012927\|Ga0137416_11945111	Not Available	539	Open in IMG/M
3300012929\|Ga0137404_11255477	Not Available	682	Open in IMG/M
3300015241\|Ga0137418_10964972	Not Available	620	Open in IMG/M
3300018468\|Ga0066662_12059102	Not Available	598	Open in IMG/M
3300019887\|Ga0193729_1085392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1224	Open in IMG/M
3300020579\|Ga0210407_10899260	Not Available	679	Open in IMG/M
3300020581\|Ga0210399_11096544	Not Available	637	Open in IMG/M
3300020583\|Ga0210401_10070789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3284	Open in IMG/M
3300020583\|Ga0210401_10910288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300021088\|Ga0210404_10187429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1104	Open in IMG/M
3300021168\|Ga0210406_11311291	Not Available	521	Open in IMG/M
3300021171\|Ga0210405_10311664	Not Available	1243	Open in IMG/M
3300021403\|Ga0210397_10507732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M
3300021432\|Ga0210384_10097224	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300021432\|Ga0210384_10319022	Not Available	1399	Open in IMG/M
3300021432\|Ga0210384_10579062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1009	Open in IMG/M
3300021432\|Ga0210384_11438990	Not Available	594	Open in IMG/M
3300021432\|Ga0210384_11563575	Not Available	565	Open in IMG/M
3300021559\|Ga0210409_11354585	Not Available	587	Open in IMG/M
3300022506\|Ga0242648_1078742	Not Available	547	Open in IMG/M
3300022506\|Ga0242648_1096312	Not Available	511	Open in IMG/M
3300022531\|Ga0242660_1223458	Not Available	527	Open in IMG/M
3300022712\|Ga0242653_1043423	Not Available	712	Open in IMG/M
3300022717\|Ga0242661_1035083	Not Available	882	Open in IMG/M
3300022718\|Ga0242675_1077592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300022722\|Ga0242657_1230978	Not Available	523	Open in IMG/M
3300022724\|Ga0242665_10261853	Not Available	592	Open in IMG/M
3300022726\|Ga0242654_10287839	Not Available	600	Open in IMG/M
3300027537\|Ga0209419_1010386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1576	Open in IMG/M
3300027565\|Ga0209219_1046068	Not Available	1089	Open in IMG/M
3300027583\|Ga0209527_1114952	Not Available	602	Open in IMG/M
3300027610\|Ga0209528_1039915	Not Available	1040	Open in IMG/M
3300027651\|Ga0209217_1129787	Not Available	706	Open in IMG/M
3300027727\|Ga0209328_10092783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300027884\|Ga0209275_10700817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300028047\|Ga0209526_10023863	All Organisms → cellular organisms → Bacteria	4283	Open in IMG/M
3300028047\|Ga0209526_10141995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1684	Open in IMG/M
3300028047\|Ga0209526_10410759	Not Available	897	Open in IMG/M
3300028047\|Ga0209526_10496732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300028536\|Ga0137415_10231546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1660	Open in IMG/M
3300028536\|Ga0137415_11374605	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300028906\|Ga0308309_10940486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300029636\|Ga0222749_10346364	Not Available	777	Open in IMG/M
3300029636\|Ga0222749_10512150	Not Available	651	Open in IMG/M
3300030997\|Ga0073997_11697231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031820\|Ga0307473_11209422	Not Available	562	Open in IMG/M
3300031962\|Ga0307479_12100202	Not Available	513	Open in IMG/M
3300032180\|Ga0307471_103622051	Not Available	547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.51%
Loam	Environmental → Terrestrial → Soil → Loam	25.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101913421	3300001593	Forest Soil	MSNERRESKGTLGLIPALRARIAQYREQAARFARLAEAEPVEKIRDQWTTLAHDYAYLATTLEPDGGSSRGTAL*
JGIcombinedJ26739_1001075131	3300002245	Forest Soil	ESQASRGLLGSISSLRARIARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLAATLEPNGGSSRGAAL*
Ga0066690_106719872	3300005177	Soil	MRNASQEPRGLVGLLIPSLRARIARYHEQAAHFTRLAEVEPVETIRDQWKTLAGDYAYLARTLEPDGHSSRGPAL*
Ga0066690_108839352	3300005177	Soil	MGNESQAPRGPLGLIPSLRARIARYGEQAAYFTRLAEAEPVEKIRDQWKSLARDYSYLATTLATDGGSSPAATFYPTPRANPVAGDD*
Ga0066687_106553481	3300005454	Soil	MGNESPALRGPLGLIASLRARIARYREQADHFTQLADAEPVETIRDQWKTLARDYAYLASTLEPDEGASRGATLYPPRTSPLAGDD*
Ga0066700_102924132	3300005559	Soil	MSSESQESRGPSGLIASLQARIARYREQATYFTQLAETEPVETIRDQWKTLARDYAYLATTLEPDGGLSRRTLYPTPRTSPVAGDA*
Ga0066708_109649821	3300005576	Soil	MGNESQESKGALGLIPALRARIARYREQAAHFTRLADAEPVETIRDQWKTLARDYAYLASTLQPDDGASRVATLYPPRTSPLAGDD*
Ga0070762_104438573	3300005602	Soil	MGNERQASRGLLGSISSLRARVARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGVAL*
Ga0070766_100645862	3300005921	Soil	MSSERQEARGPLGLIASLRGRIARYREQADHFSQLAEAEPVEKIRDQWQTLARDYAYLASSLEPRGHALPDASHKPGRR*
Ga0070766_101266621	3300005921	Soil	MGNESLGLIASLRARISRYREQADHFTRLAEAEPVEKIRDQWTTLARDYAYLASSLEPGGYSSRGYSMPRTSAVAGDD*
Ga0070766_101581782	3300005921	Soil	MSSERQESRGPLGLIASLRGRIARYREQADHFKRLAEAEPVETIRDQWTTLARDYAYLASSLEPNGGRGYPTAHTSRVAGDD*
Ga0070766_108299892	3300005921	Soil	MGNESRGLSGLIPAQRARAAQYREQAAHFTRLAEAEPVEKIRDQWKTLARDYAYLATTLEPGGHSSRGAAL*
Ga0070765_1001717683	3300006176	Soil	MSSERQESGGPSASLQARIDRYREQADHFARLAESEPVETIRDQWRTLARDYAYLANTLGPHGHSSRGAPL*
Ga0070765_1004329532	3300006176	Soil	MGKESRGLSGLIPAQRARAAQYREQAAHFTRLAEAEPVEKIRDQWKTLARDYAYLAITLEPGGHSSRGAAL*
Ga0070765_1004709252	3300006176	Soil	MSSERQESRGPLGLIASLRGRIARYREQADHFKRLAEAEPVETIRDQWTTLARDYAYLASSLEPNGGASRGYPTAHTSPVAGDD*
Ga0070765_1005969141	3300006176	Soil	ESKGVSRLIVSLRARIAQYREQAAHFTRLAEAEPVEKIRDQWTALARDYAYLAATLEPDGGSSRGAAL*
Ga0070765_1015862982	3300006176	Soil	MSNERREAKGTLGLIPALRARIAQYREQAARFARLAEAEPVEKIRDQWTTLAHDYAYLATTLEPDGGSSRGTAL*
Ga0066659_108336601	3300006797	Soil	MGYESQESTGLPGLISSLRARIARYREQADHFTRLADAEPVEKIRDQWKTLARDYAYLANTLEPGSHSSHGGTLYSTPRTSAVAGDD*
Ga0066660_113209641	3300006800	Soil	HLGNAGTFAMGNESQESKGALGLIPALRARIARYREQADHFTRLAEAEPVETIRDQWKILAGDYAYLARTLEPDSHESRGRALTNKG*
Ga0099793_102091571	3300007258	Vadose Zone Soil	MGNESEGSKTLGLIASLRARIARYREQADHFTRLAEVEPVETIRDQWITLARDYAYLATTLEPDGGSSRGAALYPTPRTSPAAGDD*
Ga0066710_1022217442	3300009012	Grasslands Soil	PTSRERGTFAMSNESRESKGNLGLIASLRARIARYREQADHFTRLAEAEPVEKIRDQWITLARDYAYLATTLEPNGGLSRRTLYPTPRTSPVAGDD
Ga0099828_103141442	3300009089	Vadose Zone Soil	MGNESQESNGALGLIPALRARIARYREQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGAALYPTPRTSPVAGDD*
Ga0150983_114891121	3300011120	Forest Soil	MSNESWESKGTLGLIPALRARIAQYREQAARFARLAEAEPVEKIRDQWTTLAHDYAYLATTLEPDGGSSRGTAL*
Ga0150983_116495882	3300011120	Forest Soil	MGNESQGSKSVSGSIVSLRARIAQYREQAAHFTRLAEAEPVEKIRDQWATLARDYAYLATVLEPDGGSSRGSAPLPDGSVAGDD*
Ga0137392_104094433	3300011269	Vadose Zone Soil	MGNESQESRGPLGLIASLRARIARYREQADHFTRLADAEPVEKIRDQWKTLARDYAYLATTLATDGGSSPAATFYPTPRTKPVAGHD*
Ga0137391_102738974	3300011270	Vadose Zone Soil	MSSESLGLIASLRARIARYREQADHFTRLADAEPIEKIRDQWKTLARDYAYLASSLEPDGHSSRGGILYPTPRTSVAGDD*
Ga0137391_105135931	3300011270	Vadose Zone Soil	TESQSTRCPVGSISSLRARIARYHEQAAHFTQLAEAEPVETIRDQWKTLARDYAYLASTLEPHGHSSRGAALYPTARTSPVAGDD*
Ga0137391_108042121	3300011270	Vadose Zone Soil	MGNESQESIGPLGLNASLRARIARYREQADHFTRLADAEPVEKIRDQWKTVARDYAYLASSLEPDGRSSRGGTLYPTPRINPAAGDD*
Ga0137393_101341911	3300011271	Vadose Zone Soil	MGNESQASRGPLGSISSLRARIARYHEQAAHFTQLAEAEPVETIRDQWKTLARDYAYLASTLEPHGHSSRGAALYPTARTSPVAGDD*
Ga0137388_116627051	3300012189	Vadose Zone Soil	DLPKVRHRHLGDVVGTFAMSSESLGLIASLRARIARYREQADHFTRLADAEPVEKIRDQWKTVARDYAYLASSLEPDGRSSRGGTLYPTPRINPAAGDD*
Ga0137383_103858881	3300012199	Vadose Zone Soil	MGNESQESKGALGLIPALHVRVARYREQAAHFTQLAEGEPVETIRDQWTTLARDYAYLATTLEPNGGSSRGAALYPTPRTSPAAGDD*
Ga0137382_103415812	3300012200	Vadose Zone Soil	MGNLSQEWRSALGSIASLRARIARYREQADQFTRLAEAEPVETIRDQWKTLACDYAYLATTLEPDGGLSRR
Ga0137382_103827272	3300012200	Vadose Zone Soil	MSGESQELRGPLGLISSLRARIARYHEQAAYFARLAEAEPVETIRDQWKTLARDYAYLATTLEPDGGLSRGATLYPMARTSPVAGDD*
Ga0137399_112651451	3300012203	Vadose Zone Soil	FAMGNESQESRGPLGLIASLKARIARYREQADHFTQLADAETVENIRDQWKTLARDYAYLASTLEPDGGASRLGTLYSPRTSPLAGDD*
Ga0137374_104425202	3300012204	Vadose Zone Soil	MRNESQESKGALGLIPALRTRVARYREHAAYFTQLAEAEPVEKIRDQWKTLARDYAYLATTLEPDGGSRRGAALYPTPRTSPAAGDD*
Ga0137362_109856391	3300012205	Vadose Zone Soil	MGNESQESKGALGLIPALRARIARYREQAAHFTQLAEGEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGAALLPDASHKPGSG*
Ga0137376_107407241	3300012208	Vadose Zone Soil	LAMGNESEDSKGALGLIPALRARIARYREQAAHFTQLAEGEPVETIRDQWTTLARDYAYLATTLEPNDGSSRGAALYPTPRTSPVAGDD*
Ga0137377_104695023	3300012211	Vadose Zone Soil	MGNESQESKGALGLIPALRARIARYREQADHFTRLADAEPVETIRDQWKTLASDYTYLAITLEPNGGSSRGAALLPDASHKPGSG*
Ga0137377_116248741	3300012211	Vadose Zone Soil	MGNESQESKGALGLIPALRARIARYREQADQFTRLAEAEPVETIRDQWKTLARDYAYLATTLEPDGGLSRRTLYPTPRTSPVAGDA*
Ga0137367_103286751	3300012353	Vadose Zone Soil	MRNESQESKGALGLIPALRARVARYREHAAYFTQLAEAEPVEKIRDQWKILARDYAYLANTLEPQSRGAALYPTGRPSAVAGDD*
Ga0137366_102021292	3300012354	Vadose Zone Soil	MRNESQESKGALGLIPALRTRVARYREHAAYFTQLAEAEPVEKIRDQWTTVARDYAYLANTLEPQSRGAALYPTGRPSAVAGDD*
Ga0137375_102298832	3300012360	Vadose Zone Soil	MRNESQESKGALGLIPALRARVARYREHAAYFTQLAEAEPVEKIRDQWKTLARDYAYLATTLEPDGGSRRGAALYPTPRTSPAAGDD*
Ga0137361_106644021	3300012362	Vadose Zone Soil	MGNESQESRGPLGLIASLRARIARYREQADHFTRLADAEPVEKIRDQWKTVARDYAYLASSLEPDGHSSRGAALYPTSRTSPAAGDD*
Ga0137361_111209992	3300012362	Vadose Zone Soil	FLPKMRPRHLGISGTFAMSGESQELRGPLGLISSLRARIARYHEQAAYFARLAEAEPVETIRDQWKTLARDYAYLATTLEPDGGLSRGATLYPTPRTILVAADD*
Ga0137361_116179281	3300012362	Vadose Zone Soil	RPNRLLAKRLAMGNESQEPKGGLGLIPALRARIARYREQADHFTRLADAEPVETIRDQWKTLASDYTYLAITLEPNGGSSRGAALLPDASHKPGSG*
Ga0137390_101366483	3300012363	Vadose Zone Soil	MSSESLGLIASLRARIARYREQADHFTRLADAEPIDKIRDQWKTLARDYAYLASSLEPDGHSSRGGILYPTPRTSVTGDD*
Ga0137373_101382185	3300012532	Vadose Zone Soil	MSGESQELRGPLGLISSLRARIARYHEQAAYFARLAEAEPVETIRDQWKTLARDYAYLATTLEPDGGSRRGAALYPTPRTSPAAGDD*
Ga0137358_110799331	3300012582	Vadose Zone Soil	MGNESQESKGALGLIPALRARIARYREQPDHFTRLAETEPVEKIRDQWKTLARDYAYLATTLEPDGGLSRGATLYPMARTSPVAGDD*
Ga0137396_102551822	3300012918	Vadose Zone Soil	MGSERQESKGALGLIASLRGRIARYREQAAHFTRLAEAEPVEKIRDQWRTLARDYAYLATTLEPDGGLSRGATLYPTPRTILVAADD*
Ga0137396_107251001	3300012918	Vadose Zone Soil	VAPDILGLWDIAMGNQSEEPKGLSGLISAQRARAARYREQADHFTRLAETEPVKKIRDQWTTVARDYAYLASTLEPDGGLSRGATPYPMARTILVAGGD*
Ga0137359_107085031	3300012923	Vadose Zone Soil	MGNESEDSKGALGLIPALRARIARYREQAAHFTQLAEGEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGAALYPTPRASPVAGDD*
Ga0137419_111763121	3300012925	Vadose Zone Soil	MGNESEESKTLGLIASLRARIARYREQADHFTRLAEVEPVEKIRDQWKTVARDYAYLASSLEPDGHSSRGAALYPTSRTSPAAGDD*
Ga0137419_111944131	3300012925	Vadose Zone Soil	MGNESQESRGPLGLIASLQARIARYREQADHFTQLADAETVENIRDQWKTLARDYAYLASTLEPDGGSSRGAAL*
Ga0137419_116963062	3300012925	Vadose Zone Soil	MGSERQESKGALGLIASLRGRIARYREQAAHFTRLAEAEPVEKIRDQWRTLARDYAYLATTLEPDGGLSR
Ga0137416_119451111	3300012927	Vadose Zone Soil	MGSERQESRGAFGLIASLRGRIARYREQAAHFTRLAEAEPVEKIRDQWRTLARDYAYLATTL
Ga0137404_112554772	3300012929	Vadose Zone Soil	MSGESEESKTLGLIASLRARIARYREQADHFTRLAEVEPVEKIRDQWKTVARDYAYLASSLEPDGHSSRGAALYPTSRTSPAAGDD*
Ga0137418_109649721	3300015241	Vadose Zone Soil	MGSERQESKGALGLIASLRGRIARYREQAAHFTRLAEAEPVEKIRDQWRTLARDYAYLATTLEPDGGLSRRTLYPTPRTSPVAGDA*
Ga0066662_120591021	3300018468	Grasslands Soil	LAMSSESQESRGPLGLIASLRARIARYREQADHFTQLADAEPVETIRDQWKTLARDYAYLANTLEPGSHSSHGGTLYSTPRTSAVAGDD
Ga0193729_10853922	3300019887	Soil	MDYESQESRGPLGSITSLRARIARYREQADQFTRLAEAEPVETIRDQWKTVARDYAYLATTLEPDGGLSRRTLYPTPRTSPVAGDA
Ga0210407_108992601	3300020579	Soil	MSSESQGSRSPLGLIASLQARIARYREQADHFTRLAASEPVETIRDQWVTLARDYAYLASSLEPQSRGGTLYPMARTSPVAGDD
Ga0210399_110965442	3300020581	Soil	MANESQEPRSPLGLIASLRARIARYHEQADHFTRLAEAEPVEKIRDQWKTLARDYAYLASSLEPQSHGGTPYPTPRASAVAGDD
Ga0210401_100707894	3300020583	Soil	MSSERQESRGPLGLIASLRGRIARYREQADHFKRLAEAEPVETIRDQWTTLARDYAYLASSLEPNGGASRGYPTAHTSPVAGDD
Ga0210401_109102881	3300020583	Soil	MSSERQEARGPLGLIASLRGRIARYREQADHFSQLAEAEPVEKIRDQWQTLARDYAYLASSLEPQSRGATLYPTPRTSPVAGDD
Ga0210404_101874291	3300021088	Soil	MGNESQESTRLPGSIPSLRARIAQYREQAAHFTRLAEAEPVEKIRDQWTTLAHDYAYLATTLEPDGGSSRGTAL
Ga0210406_113112911	3300021168	Soil	PAHLVNADARYGHRVGGHRDCGTFAMSSESQESRGPLGLIASLRAGIARYREQAAHFTRLAEAKPVEKIRDQWKTLARDYAYLASSLGPQSRGAALYSMPRTSPAAGDD
Ga0210405_103116641	3300021171	Soil	MSSERQESRGPLGLIASLRGRIARYREQADHFKRLAEAEPVETIRDQWTTLARDYAYLASSLE
Ga0210397_105077321	3300021403	Soil	MSNESWESKGTLGLIPALRARIAQYREQAARFARLAEAEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGVAL
Ga0210384_100972242	3300021432	Soil	MGNERQASRGLLGSISSLRARVARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGVAL
Ga0210384_103190221	3300021432	Soil	MGNESLGLIASLRARISRYREQADHFTRLAEAEPVEKIRDQWTTLARDYAYLASSLEPGGYSSRGYSMPRTSAVAGDD
Ga0210384_105790622	3300021432	Soil	MSNESWESKGTLGLIPALRARIAQYREQAARFARLAEAEPVEKIRDQWTTLAHDYAYLATTLEPDGGSSRGTAL
Ga0210384_114389902	3300021432	Soil	MGNESQESTRLPGLIPSLLARIARYREQAAHFTRLAEAEPVEKIRDQWTTLARDYEYLANTLEPDGRVEPRTSPVAGDD
Ga0210384_115635751	3300021432	Soil	MIDERKEPRGALGKIPPLRDRIASYREHAARFTRLAEAEPVERIRDQWKNLARDYNYLARTLEDGG
Ga0210409_113545851	3300021559	Soil	MSSERQESRGPLGLIASLRGRIARYREQADHFKRLAEAEPVETIRDQWTTLARDYAYLASSLEPNGGR
Ga0242648_10787421	3300022506	Soil	MSSERQESRGPLGLIASLRGRIARYREQADHFKRLAEAEPVETIRDQWTTLARDYAYLASSLEPNGGASRGYPTAHTSRVAGD
Ga0242648_10963121	3300022506	Soil	TFAMSNESRESKGTLGLIPALRARIAQYREQAARFARLAEAEPVEKIRDQWTTLAHDYAYLATTLEPDGGSSRGTAL
Ga0242660_12234582	3300022531	Soil	RPRHLGKVGTFAMGNESRGLSGLIPAQRARAAQYREQAAHFTRLAEAEPVEKIRDQWKTLARDYAYLATTLEPGGHSSRGAAL
Ga0242653_10434231	3300022712	Soil	PRHLGKVGTFAMSSERQESRGPLGLIASLRGRIARYREQADHFKRLAEAEPVETIRDQWTTLARDYAYLASSLEPNGGASRGYPTAHTSPVAGDD
Ga0242661_10350832	3300022717	Soil	GTFAMGNERQASRGLLGSISSLRARVARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGVAL
Ga0242675_10775922	3300022718	Soil	APPTPWEGGTFAMGNERQASRGLLGSISSLRARVARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGVAL
Ga0242657_12309781	3300022722	Soil	PTPWERGTFAMGNERQASRGLLGSISSLRARVARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGVAL
Ga0242665_102618531	3300022724	Soil	PEGAPPTPWEGGTFAMGNERQASRGLLGSISSLRARVARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLATTLEPNGGSSRGVAL
Ga0242654_102878392	3300022726	Soil	RLQHLGIGGTFAMSSESQGSRSPLGLIASLQARIARYREQADHFTRLAASEPVETIRDQWVTLARDYAYLASSLEPQSRGGTLYPMARTSPVAGDD
Ga0209419_10103864	3300027537	Forest Soil	MSSESQASRGPLGLISSLRARVARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLAATLEPNGGSSRGAAL
Ga0209219_10460684	3300027565	Forest Soil	MSSESQESRGPLGSISSLRARIARYREQAAHFTRLAEAEPVETIRDQWKTLARDYAYLATTLEPNGGSS
Ga0209527_11149522	3300027583	Forest Soil	MSSESQALGLIASLRARIAQYREQAAHFTRLAEAEPVERIRDQWTTLARDYAYLAATLEPNGGSSRGAAL
Ga0209528_10399151	3300027610	Forest Soil	MSSESQASRGPLGLISSLRARVARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLASTLEPHGHPSRGAALYPTAHTSPVAGDD
Ga0209217_11297872	3300027651	Forest Soil	MSNESRESKGTLGLIPALRARIAQYREQAARFARLAEAEPVEKIRDQWTTLARDYAYLASTLEPHGHPSRGAALYPTAHTSPVAGDD
Ga0209328_100927832	3300027727	Forest Soil	MSSESQASRGPLGLISSLRARVARYHEQAAHFTRLAEAEPVEKIRDQWTTLAHDYAYLATTLEPDGGSSRGTAL
Ga0209275_107008172	3300027884	Soil	MSSERQEARGPLGLIASLRGRIARYREQADHFSQLAEAEPVEKIRDQWQTLARDYAYLASSLEPRGHALPDASHKPGRR
Ga0209526_100238637	3300028047	Forest Soil	MSSESQASRGLLGSISSLRARIARYHEQAAHFTRLAEAEPVEKIRDQWTTLARDYAYLAATLEPNGGSSRGAAL
Ga0209526_101419952	3300028047	Forest Soil	MSNERRESKGTLGLIPALRARIAQYREQAARFARLAEAEPVEKIRDQWTTLAHDYAYLATTLEPDGGSSRGTAL
Ga0209526_104107591	3300028047	Forest Soil	MSSESQALGLIASLRARIAQYREQAAHFTRLAEAEPVEKIRDQWKTLARDYAYLATTLEPDGGPSRRAAL
Ga0209526_104967321	3300028047	Forest Soil	MSSERQESRGPLGLIASLRGRIARYREQADHFKRLAEAEPVEKIRDQWTTLARDYAYLASSLEPNGGA
Ga0137415_102315461	3300028536	Vadose Zone Soil	MGNESQESKGVSGLIVSLRARIARYREQAAHFTRLAEAEPVEKIRDQWKTLARDYAYLATTLEPDGGLSRGAILYPMARTILVAADD
Ga0137415_113746051	3300028536	Vadose Zone Soil	MGNESQGALGLIPALRARIAGYHKQAAHFGRLAEAEPVEKIRDQWKTLARDYAYLASSLEPGGYSSRGG
Ga0308309_109404862	3300028906	Soil	CLSGLIPAQRARAAQYREQAAHFTRLAEAEPVEKIRDQWKTLARDYAYLAITLEPGGHSSRGAAL
Ga0222749_103463642	3300029636	Soil	LGKAGTIKMSSERQESGGPSASLQARIARYREQADHFTRLAEAEPVEKIRDQWKTLARDYAYLASTLEPQSRGAALYSMPRTSAAAGDD
Ga0222749_105121502	3300029636	Soil	MGNESLGLIASLRARISRYREQADHFTRLAEAEPVEKIRDQWTTLARDYAYLASSLEPGGYSSRGYSMPRTS
Ga0073997_116972311	3300030997	Soil	VGENQESRGALGLIPALRARIAGYREQAAHFTRLAETEPVEKIRDQWTTVARDYAYLASTLESDGGLTGCH
Ga0307473_112094222	3300031820	Hardwood Forest Soil	SGLISAQRARAARYREQADHFTRLAETEPVQKIRDQWTTVARDYAYLASSLEPQSYGGTPYPTLRTSAVAGDD
Ga0307479_121002021	3300031962	Hardwood Forest Soil	MSSESQESRGPLGLIASLQARIARYREQAAHFTRLADAEPVETIRDQWVTLARDYAYLASSLEPQSRGGTLYPMARTSPVAGDD
Ga0307471_1036220511	3300032180	Hardwood Forest Soil	MGNESQESKGALGLIPALRARIARYREQADHFTRLAEAEPVETIRDQWKTLARDYAYLANTLEPQSRGAALYPTPRTSPVAGDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101575

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences