Metagenome / Metatranscriptome Family F101586

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101586
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	42 residues
Representative Sequence	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Number of Associated Samples	77
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.98 %
% of genes near scaffold ends (potentially truncated)	26.47 %
% of genes from short scaffolds (< 2000 bps)	74.51 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.353 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (49.020 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.392 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.41% β-sheet: 0.00% Coil/Unstructured: 45.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13533	Biotin_lipoyl_2	34.31
PF00529	CusB_dom_1	5.88
PF16576	HlyD_D23	4.90
PF03150	CCP_MauG	4.90
PF07690	MFS_1	3.92
PF00210	Ferritin	1.96
PF02738	MoCoBD_1	1.96
PF07883	Cupin_2	1.96
PF13442	Cytochrome_CBB3	1.96
PF01436	NHL	0.98
PF13493	DUF4118	0.98
PF02879	PGM_PMM_II	0.98
PF13565	HTH_32	0.98
PF03098	An_peroxidase	0.98
PF03446	NAD_binding_2	0.98
PF02518	HATPase_c	0.98
PF12697	Abhydrolase_6	0.98
PF03450	CO_deh_flav_C	0.98
PF03466	LysR_substrate	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	4.90
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.98
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.35 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.35 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.35 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.00 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.65 %
Unclassified	root	N/A	17.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.96 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.96 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.96 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.98 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.98 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.98 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.96 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.96 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	0.98 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.98 %
Acidomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidomonas	0.98 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.96 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.96 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	0.98 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.98 %
Acidomonas methanolica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidomonas → Acidomonas methanolica	0.98 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.96 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.96 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.98 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	0.98 %
Acidomonas methanolica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidomonas → Acidomonas methanolica	0.98 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100138802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	2295	Open in IMG/M
3300003505\|JGIcombinedJ51221_10087567	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300004080\|Ga0062385_10025517	All Organisms → cellular organisms → Bacteria → Proteobacteria	2297	Open in IMG/M
3300004120\|Ga0058901_1504804	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005534\|Ga0070735_10534952	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005538\|Ga0070731_10003552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13970	Open in IMG/M
3300005542\|Ga0070732_10128162	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300005591\|Ga0070761_10118666	All Organisms → cellular organisms → Bacteria → Proteobacteria	1534	Open in IMG/M
3300005602\|Ga0070762_10023033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	3268	Open in IMG/M
3300005712\|Ga0070764_10426836	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300005921\|Ga0070766_10177389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1320	Open in IMG/M
3300005921\|Ga0070766_10190890	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300005921\|Ga0070766_11307217	Not Available	503	Open in IMG/M
3300006176\|Ga0070765_100057026	All Organisms → cellular organisms → Bacteria	3216	Open in IMG/M
3300006176\|Ga0070765_100419937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1250	Open in IMG/M
3300006176\|Ga0070765_100923944	Not Available	825	Open in IMG/M
3300006176\|Ga0070765_101444713	Not Available	648	Open in IMG/M
3300006893\|Ga0073928_10243866	All Organisms → cellular organisms → Bacteria → Proteobacteria	1378	Open in IMG/M
3300006893\|Ga0073928_10647877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	741	Open in IMG/M
3300006893\|Ga0073928_11199053	Not Available	511	Open in IMG/M
3300010379\|Ga0136449_104122958	Not Available	540	Open in IMG/M
3300011120\|Ga0150983_11040010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	606	Open in IMG/M
3300011120\|Ga0150983_11053267	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300011120\|Ga0150983_12731898	All Organisms → cellular organisms → Bacteria → Proteobacteria	773	Open in IMG/M
3300012088\|Ga0153944_1063902	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300012363\|Ga0137390_10731508	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300012944\|Ga0137410_11129427	Not Available	672	Open in IMG/M
3300014156\|Ga0181518_10000287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58833	Open in IMG/M
3300014165\|Ga0181523_10439606	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300014489\|Ga0182018_10046613	All Organisms → cellular organisms → Bacteria → Proteobacteria	2668	Open in IMG/M
3300014489\|Ga0182018_10053436	All Organisms → cellular organisms → Bacteria → Proteobacteria	2463	Open in IMG/M
3300014501\|Ga0182024_10893910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1071	Open in IMG/M
3300019888\|Ga0193751_1004845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7623	Open in IMG/M
3300020579\|Ga0210407_10153464	All Organisms → cellular organisms → Bacteria → Proteobacteria	1776	Open in IMG/M
3300020580\|Ga0210403_10418904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1093	Open in IMG/M
3300020580\|Ga0210403_11474923	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300020581\|Ga0210399_10443062	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300020583\|Ga0210401_10169694	All Organisms → cellular organisms → Bacteria	2036	Open in IMG/M
3300020583\|Ga0210401_10236098	All Organisms → cellular organisms → Bacteria → Proteobacteria	1687	Open in IMG/M
3300020583\|Ga0210401_11591709	Not Available	511	Open in IMG/M
3300021088\|Ga0210404_10010495	All Organisms → cellular organisms → Bacteria → Proteobacteria	3788	Open in IMG/M
3300021170\|Ga0210400_11169481	Not Available	621	Open in IMG/M
3300021171\|Ga0210405_10017359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5889	Open in IMG/M
3300021171\|Ga0210405_10400424	Not Available	1081	Open in IMG/M
3300021171\|Ga0210405_11165618	Not Available	573	Open in IMG/M
3300021178\|Ga0210408_10067350	All Organisms → cellular organisms → Bacteria	2796	Open in IMG/M
3300021180\|Ga0210396_11207274	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300021181\|Ga0210388_11215797	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300021181\|Ga0210388_11798366	Not Available	505	Open in IMG/M
3300021401\|Ga0210393_10589835	Not Available	908	Open in IMG/M
3300021403\|Ga0210397_10347082	Not Available	1099	Open in IMG/M
3300021404\|Ga0210389_10073651	All Organisms → cellular organisms → Bacteria → Proteobacteria	2619	Open in IMG/M
3300021405\|Ga0210387_10420942	All Organisms → cellular organisms → Bacteria → Proteobacteria	1184	Open in IMG/M
3300021406\|Ga0210386_10492867	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300021407\|Ga0210383_10025574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4945	Open in IMG/M
3300021420\|Ga0210394_10088935	All Organisms → cellular organisms → Bacteria → Proteobacteria	2669	Open in IMG/M
3300021474\|Ga0210390_10113155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2270	Open in IMG/M
3300021475\|Ga0210392_10600648	All Organisms → cellular organisms → Bacteria → Proteobacteria	816	Open in IMG/M
3300021475\|Ga0210392_10811851	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300021477\|Ga0210398_10001106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28883	Open in IMG/M
3300021477\|Ga0210398_11627728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidomonas → Acidomonas methanolica	500	Open in IMG/M
3300021478\|Ga0210402_10779863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	881	Open in IMG/M
3300021478\|Ga0210402_10889925	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300021479\|Ga0210410_10075253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2962	Open in IMG/M
3300021479\|Ga0210410_10332844	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300022525\|Ga0242656_1025676	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300022528\|Ga0242669_1023768	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300022532\|Ga0242655_10312369	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300022557\|Ga0212123_10505753	Not Available	783	Open in IMG/M
3300022717\|Ga0242661_1020114	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300022724\|Ga0242665_10191444	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300022726\|Ga0242654_10207350	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300024225\|Ga0224572_1005700	All Organisms → cellular organisms → Bacteria → Proteobacteria	2231	Open in IMG/M
3300027370\|Ga0209010_1000397	All Organisms → cellular organisms → Bacteria → Proteobacteria	14297	Open in IMG/M
3300027565\|Ga0209219_1119873	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300027583\|Ga0209527_1107456	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300027605\|Ga0209329_1011888	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300027635\|Ga0209625_1042729	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300027684\|Ga0209626_1007380	All Organisms → cellular organisms → Bacteria	2480	Open in IMG/M
3300027783\|Ga0209448_10006615	All Organisms → cellular organisms → Bacteria → Proteobacteria	3661	Open in IMG/M
3300027884\|Ga0209275_10344168	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300027889\|Ga0209380_10048152	All Organisms → cellular organisms → Bacteria	2420	Open in IMG/M
3300027889\|Ga0209380_10163399	All Organisms → cellular organisms → Bacteria → Proteobacteria	1304	Open in IMG/M
3300027895\|Ga0209624_10599173	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300027908\|Ga0209006_10063031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3312	Open in IMG/M
3300028021\|Ga0265352_1008134	Not Available	651	Open in IMG/M
3300028906\|Ga0308309_10790580	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300028906\|Ga0308309_11232730	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300028906\|Ga0308309_11250178	Not Available	639	Open in IMG/M
3300029636\|Ga0222749_10151057	All Organisms → cellular organisms → Bacteria → Proteobacteria	1132	Open in IMG/M
3300029636\|Ga0222749_10275884	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300030730\|Ga0307482_1038117	Not Available	1112	Open in IMG/M
3300030763\|Ga0265763_1000187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3306	Open in IMG/M
3300030923\|Ga0138296_1011846	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300031018\|Ga0265773_1047808	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031022\|Ga0138301_1848259	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300031231\|Ga0170824_111038591	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300031231\|Ga0170824_113924755	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300031715\|Ga0307476_10613354	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300031718\|Ga0307474_10714008	Not Available	792	Open in IMG/M
3300031754\|Ga0307475_10699027	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300032160\|Ga0311301_10581377	All Organisms → cellular organisms → Bacteria → Proteobacteria	1624	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.20%
Aquatic	Environmental → Aquatic	7.84%
Plants	Host-Associated → Plants	0.98%
Fungi	Host-Associated → Fungi	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.20%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%
Mycelium	Host-Associated → Fungi → Mycelium	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.84%
Loam	Environmental → Terrestrial → Soil → Loam	29.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	29.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.18%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	15.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.73%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012088	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ028 MetaG	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028021	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE5	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001388023	3300002245	Forest Soil	MFGELTQILLFLAIAGLTVVSTIDLVMQPIKQEQGIDKKH*
JGIcombinedJ51221_100875672	3300003505	Forest Soil	MFGESTQILLFLAIVGLTVVSTIDLIMQPIKQEQDIDKKH*
Ga0062385_100255172	3300004080	Bog Forest Soil	MFGESTQLLLFLAIVGLTVVSTIDLVMQPIKQEQDIDKKH*
Ga0058901_15048042	3300004120	Forest Soil	MMEEYMFGESTQILLFLAIVGLTVVSTIDLVMQPVKQQKNTDREH*
Ga0070735_105349522	3300005534	Surface Soil	MEERMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQEKNTDREH*
Ga0070731_1000355213	3300005538	Surface Soil	MSGESTQLLLFLAIVGLTVVSTIDLAMQPVKQEQDIDKKH*
Ga0070732_101281623	3300005542	Surface Soil	MFGESTQLLLFLAIVGLTVVSTIDLVMQPIKQEKNTDREH*
Ga0070761_101186663	3300005591	Soil	MFGESTQVLLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH*
Ga0070762_100230333	3300005602	Soil	MFAESTQVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDQEH*
Ga0070764_104268361	3300005712	Soil	TFPTMEEHMFGESTQALLFLAIVGLTVVSTIDAVMQPKKH*
Ga0070766_101773893	3300005921	Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTD
Ga0070766_101908902	3300005921	Soil	MMEAGMFGNSTQVLLFLAIVGLTVVSTIDLVMQPIKQQKNTDREH*
Ga0070766_113072172	3300005921	Soil	MEEHMFGESTQILLFLAIVGLTVVSTIDLIMQPIKQEQDIDKKH*
Ga0070765_1000570264	3300006176	Soil	YDAFTIMEEPMFGGSTQVLLFLAIVGLTLVSTIDLLMQSIKQEKNTDQEH*
Ga0070765_1004199372	3300006176	Soil	MFTRGTIPTMEEQMIGESTQILLFLAIVGLTVVSTIDLVMQPIKQEKNSDREH*
Ga0070765_1009239442	3300006176	Soil	MFGESTQLLLFLAIVGLTVVSTIDLVMQPINQQKNTDREH*
Ga0070765_1014447131	3300006176	Soil	MMEEHMLGESTQVLLFLAIVGLTVVSAIDLVMQPVKQQKNTDREH*
Ga0073928_102438663	3300006893	Iron-Sulfur Acid Spring	MFGESTQVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDREH*
Ga0073928_106478771	3300006893	Iron-Sulfur Acid Spring	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH*
Ga0073928_111990531	3300006893	Iron-Sulfur Acid Spring	MFGESTQVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDQEH*
Ga0136449_1041229581	3300010379	Peatlands Soil	MEEHMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQEKNSDRER*
Ga0150983_110400101	3300011120	Forest Soil	TEEYMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQGH*
Ga0150983_110532671	3300011120	Forest Soil	MEEHMFAESTQVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDQEH*
Ga0150983_127318982	3300011120	Forest Soil	EEYMFGESTQILLFLAIVGLTVVSTIDLVMQPVKQQKNTDREH*
Ga0153944_10639021	3300012088	Attine Ant Fungus Gardens	HMFGESTQVLLFLAIVGLTVVSTIDLVMQPIRQQKNIDRER*
Ga0137390_107315081	3300012363	Vadose Zone Soil	MEELMFGESTQVLLFLAIVGLTVVSTIDLVMQPIKQKENTDQER*
Ga0137410_111294271	3300012944	Vadose Zone Soil	MMEEPMLGESTQALLFLAIVGLTVVSTIDLMMQPIKQEKNTDQEH*
Ga0181518_1000028759	3300014156	Bog	MLEEHMSGEATQLLLFLAIVGLTVVSTIDLAMQPVKQERDIDKKH*
Ga0181523_104396061	3300014165	Bog	MEEHMFGESTQILLFLAIVGLTVVSSIDLAMQPVKQRKDTDQDH*
Ga0182018_100466135	3300014489	Palsa	MMEEHMLGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQER*
Ga0182018_100534362	3300014489	Palsa	MEEYMFGESTQILLFLAIVGLTVVSTIDLAMQPVKQEQDIDKKH*
Ga0182024_108939104	3300014501	Permafrost	MMEARMFGETAQVLLFLTIVGLTMLSTIDLVMQPIKQ
Ga0193751_10048455	3300019888	Soil	MFGESTQVLLFLAIVGLTVVSTIDLVMQPAKQQKNTDREH
Ga0210407_101534642	3300020579	Soil	MFGESTQVLLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0210403_104189042	3300020580	Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0210403_114749232	3300020580	Soil	MFGESTQILLFLAIVGLTVVSTIDLIMQPIKQEQDID
Ga0210399_104430621	3300020581	Soil	MFGESTQILLFLAIVGLTVVSTIDLIMQPIKQEQDIDKKH
Ga0210401_101696943	3300020583	Soil	MFAESTQVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDQEH
Ga0210401_102360983	3300020583	Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPVKQQKNTDREH
Ga0210401_115917092	3300020583	Soil	MEEHMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQGQDIDKKH
Ga0210404_100104952	3300021088	Soil	MFGESTQILLFLAIVGLTVVSTIDLVMRPIKQEQDIDKKH
Ga0210400_111694812	3300021170	Soil	MMEEHMLGESTQVLLFLAIVGLTVVSAIDLVMQPVKQQKNTDREH
Ga0210405_100173592	3300021171	Soil	MLEEHMSGESTQLLLFLAIVGLTVVSTIDLAMQPVKQEQDIDKKH
Ga0210405_104004242	3300021171	Soil	MEEHMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNPDREH
Ga0210405_111656182	3300021171	Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQEQDI
Ga0210408_100673503	3300021178	Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPIRQQKNPDREH
Ga0210396_112072741	3300021180	Soil	MEEHMFGESTQILLFLAIVGLTVVSTIDLIMQPIKQEQDIDKKH
Ga0210388_112157971	3300021181	Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQERDIDKKH
Ga0210388_117983662	3300021181	Soil	MKEEHTMFGESTQILLFLAIVGLTVLSTIDLSMQPIKQEKNTDKKH
Ga0210393_105898352	3300021401	Soil	MFGESTQILLFLAIVGLTVLSTIDLSMQPIKQEKNTDKKH
Ga0210397_103470822	3300021403	Soil	MEEHMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQEQDSDNKH
Ga0210389_100736513	3300021404	Soil	MLGESTQVLLFLAIVGLTVVSAIDLVMQPVKQQKNTDREH
Ga0210387_104209422	3300021405	Soil	MFGESTQVLLFLAIVGLTVVSTLDLVMQPIKQKQDIDREH
Ga0210386_104928672	3300021406	Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQEQDIDKKH
Ga0210383_100255745	3300021407	Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQEQDVDKKH
Ga0210394_100889352	3300021420	Soil	MSGESTQLLLFLAIVGLTVVSTIDLAMQPVKQEQDIDKKH
Ga0210390_101131553	3300021474	Soil	MFGESTQILLFLAIVGLAVVSTIDLVMQPIKQEQDIDKKH
Ga0210392_106006482	3300021475	Soil	DTFPTMEEHMFGESTQVLLFLAIVGLTVVSTIDLVMQPIKQEQDIDREH
Ga0210392_108118512	3300021475	Soil	MSGESTQILLFLAIVGLTVLSTIDLSMQPIKQEKNTDKKH
Ga0210398_1000110624	3300021477	Soil	MFGESTQVLLFLAIVGLTVVSTIDLVMQPIKQQKNIDREH
Ga0210398_116277281	3300021477	Soil	MIGESTQILLFLAIVGLTVVSTIDLVMQPIKQEKNSDRE
Ga0210402_107798632	3300021478	Soil	MFGESTQVLLLLAIVGLTVVSAIDLVMQPVKQQKNTDQEH
Ga0210402_108899252	3300021478	Soil	MEEHMFAESTQVLLFLAIVGLTVVSTIDLVMQPIKQQKSTD
Ga0210410_100752534	3300021479	Soil	MFGESTQVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDREH
Ga0210410_103328443	3300021479	Soil	MFAESTPVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDQEH
Ga0242656_10256762	3300022525	Soil	AGMFGNSTQLLLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0242669_10237681	3300022528	Soil	YMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0242655_103123691	3300022532	Soil	EHMFGESTQILLFLAIVGLTVVSTIDLIMQPIKQEQDIDKKH
Ga0212123_105057532	3300022557	Iron-Sulfur Acid Spring	MMEEHMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0242661_10201141	3300022717	Soil	EYMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0242665_101914442	3300022724	Soil	EHMLGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0242654_102073502	3300022726	Soil	EHMFGESTQILLFLAIVGLTVVSTIDLVMQPIRQQKNPDREH
Ga0224572_10057003	3300024225	Rhizosphere	MLGESTQVLLFLAIVGLTVVSTIDLVMQPVKQEQDIDKKH
Ga0209010_10003978	3300027370	Forest Soil	MFGESTQILLFLAIVGLTVVSTIDLAMQPVKQEQDIDKKH
Ga0209219_11198731	3300027565	Forest Soil	LPIMEEYMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0209527_11074562	3300027583	Forest Soil	ESTQILLFLAIVGLTVLSTIDLSMQPIKQEKNTDKEH
Ga0209329_10118881	3300027605	Forest Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDREH
Ga0209625_10427292	3300027635	Forest Soil	MFGESTQLLLFLAIVGLTVVSTIDLVMQPVKQQKNTDREH
Ga0209626_10073801	3300027684	Forest Soil	MFGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQKH
Ga0209448_100066152	3300027783	Bog Forest Soil	MFGESTQLLLFLAIVGLTVVSTIDLVMQPIKQEQDINKKH
Ga0209275_103441681	3300027884	Soil	MEEHMFGESTQVLLFLAIVGLTVVSTIDLVMQPIKQEQDIDKKH
Ga0209380_100481523	3300027889	Soil	MEEHMFGESTQVLLFLAIVGLTVVSTIDIVMQPIKQEQDIDKKR
Ga0209380_101633992	3300027889	Soil	MFGNSTQVLLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0209624_105991731	3300027895	Forest Soil	MFTRGTIPTMEEQMIGESTQILLFLAIVGLTVVSTIDLVMQPIKQE
Ga0209006_100630315	3300027908	Forest Soil	MSGESSQILLFLAIVGLTVLSTIDLSMQPIKQEKNTDKKH
Ga0265352_10081341	3300028021	Soil	MEEHMFGESTQVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDQEH
Ga0308309_107905801	3300028906	Soil	TQILLFLAIVGLTVVSTIDLVMQPIKQEQDSDNKH
Ga0308309_112327302	3300028906	Soil	MFTRGTIPTMEEQMIGESTQILLFLAIVALTVVSTIDLVMQPIKQEKNSDREH
Ga0308309_112501781	3300028906	Soil	MEEHMFAESTQVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDQEH
Ga0222749_101510572	3300029636	Soil	MFGESTQILLFLAIVGLTVVSTIDFVMQPIKQEKNTDRDH
Ga0222749_102758842	3300029636	Soil	MEEHMFGESTQILLFLAIVGLTVVSTIDLVMQPIKQEQDIDKKH
Ga0307482_10381172	3300030730	Hardwood Forest Soil	EEHMFGESTQALLFLAIVGLTVVSTIDLVMQPIKQQKNTDREH
Ga0265763_10001873	3300030763	Soil	MFGESTQVLLFLAIVGLTVVSTIDLVMQPVKQQKNTDQEH
Ga0138296_10118462	3300030923	Soil	MFGESTQILLFLAIVGLTVVSAIDLVMQPIKQQKNTDQKH
Ga0265773_10478082	3300031018	Soil	MLGESTQVLLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0138301_18482592	3300031022	Soil	EEYMFGESTQILLFLAIVGLTVVSAIDLVMQPIKQQKNTDQKH
Ga0170824_1110385912	3300031231	Forest Soil	MFGESTQILLFLAIVGLAVVSTIDLVMQPIKQQKNTDRKH
Ga0170824_1139247552	3300031231	Forest Soil	MFGESTQIFLFLAIVGLTVVSTIDLVMQPVKQEKNTDREH
Ga0307476_106133541	3300031715	Hardwood Forest Soil	MLGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDREH
Ga0307474_107140082	3300031718	Hardwood Forest Soil	MEEHMLGESTQILLFLAIVGLTVVSTIDLVLQPIKQQKNTDQEH
Ga0307475_106990272	3300031754	Hardwood Forest Soil	MLGESTQILLFLAIVGLTVVSTIDLVMQPIKQQKNTDQEH
Ga0311301_105813772	3300032160	Peatlands Soil	MLSCDTFPMMEEDMLGESTQILLFLAIVGLTVVSAIDLVMQPIKQQKNTDREH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101586

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences