Metagenome / Metatranscriptome Family F101602

Basic Information
Family ID	F101602
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	112 residues
Representative Sequence	VSEGQNAVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA
Number of Associated Samples	93
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (12.745 % of family members)
Environment Ontology (ENVO)	Unclassified (30.392 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.098 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.57% β-sheet: 31.43% Coil/Unstructured: 45.00%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.122.1.3: Histidine kinase	d1r62a_	1r62	0.80597
d.122.1.3: Histidine kinase	d2c2aa2	2c2a	0.78859
d.122.1.0: automated matches	d2e0aa2	2e0a	0.7802
d.122.1.4: alpha-ketoacid dehydrogenase kinase, C-terminal domain	d4e01a2	4e01	0.75093
d.122.1.3: Histidine kinase	d1id0a_	1id0	0.74273

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF12838	Fer4_7	9.80
PF06912	DUF1275	3.92
PF07311	Dodecin	2.94
PF01734	Patatin	1.96
PF04828	GFA	1.96
PF01379	Porphobil_deam	0.98
PF08712	Nfu_N	0.98
PF01636	APH	0.98
PF12910	PHD_like	0.98
PF00486	Trans_reg_C	0.98
PF13466	STAS_2	0.98
PF13484	Fer4_16	0.98
PF03772	Competence	0.98
PF01872	RibD_C	0.98
PF12840	HTH_20	0.98
PF08241	Methyltransf_11	0.98
PF01548	DEDD_Tnp_IS110	0.98
PF12974	Phosphonate-bd	0.98
PF12867	DinB_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	3.92
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	2.94
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.96
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.96
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.96
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.96
COG0181	Porphobilinogen deaminase	Coenzyme transport and metabolism [H]	0.98
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.98
COG0658	DNA uptake channel protein ComEC, N-terminal domain	Intracellular trafficking, secretion, and vesicular transport [U]	0.98
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.98
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.45%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.90%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Sediment	Environmental → Aquatic → Sediment	2.94%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.76%
Loam	Environmental → Terrestrial → Soil → Loam	13.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Lake	Environmental → Aquatic → Freshwater → Lake	0.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%
Ice	Environmental → Aquatic → Freshwater → Ice	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.98%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.86%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015171	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_00286050	2189573000	Grass Soil	VSEDQSTVDLLEQLRIALDDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLVESAVTDAEATQSITVRVARTGGAARIEVFADRDGAPSDRAVSSMTVPL
JGI10216J12902_1041545917	3300000956	Soil	MSLTSVDLLEELRAGLDGVEPLIAGRIVDIEMARLRVLADPASFRREFSSLIEAAVAETEPTHSITVRVRRTGKSARIDVVNESDGARADDVIGSMTLPLAPGGSSAADA*
JGI10216J12902_1050678622	3300000956	Soil	MPVTSVDLLEELRAALDELEPLLAGRIVDIELSRVRVLADPAVFRLEFVSLIESAVANAGPMHSIDVRIARTGKAAQIEVYSEPGGGRSDEVVGSITVPLAPGASSAADA*
A10PFW1_107429151	3300001538	Permafrost	MSLTAIDLLXXXXXXXXXXXXXXXXXIQMSRVRVLADPQLFLREFAVLMASAVADAEPTDSITVRVARTGAAVRIEVVNERVGARSGGATGPMTLPLAPGASSAADA*
C688J35102_1207205122	3300002568	Soil	NKLATAPRQPPKLTMAWRTVLAKRCWTRTSRFASPKPSCDLTVSEDQCTVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLIESAIADAEATQSITVRVARTGGAARIEVFADRDGAPSDRVVSSMTVPLAPGASSAADA*
Ga0063454_1001660151	3300004081	Soil	MATSELRSSSSNKPATARRPPPKRTPAWRTPLAKQCTRTSRFASPKPSCDVLTVSEDLSPVDLLEQLRVALDDVEPLLVGRIVDIEMARLRVVTDPMLFRRDFASLIESAVTDAEPTQSITVRVARTGRAARIEVFADDDGAPSDRVVGSMTVPLAPGASSAAGA*
Ga0063454_1010874111	3300004081	Soil	VSEDQCTVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLIESAIADAEATQSITVRVARTGGAARIEVFADRDGAPSDRVVSSMTVPLAPGASSAAD
Ga0062389_1026340421	3300004092	Bog Forest Soil	MSLTAVDLLEQLRTALDELEPVLAGRIVDIEMSRIRVLADPGQFRQKFTLLIASAVANAQPTDSITVRVARSGTAARIEVLNERASARLDAETGSMTVPLAPGTSNAADA*
Ga0063455_1000138553	3300004153	Soil	VSEDLSPVDLLEQLRVALDDVEPLLVGRIVDIEMARLRVVTDPMLFRRDFASLIESAVTDAEPTQSITVRVARTGRAARIEVFADDDGAPSDRVVGSMTVPLAPGASSAAGA*
Ga0062594_1025762161	3300005093	Soil	MSLTSVDLLEELRGALDRIEPLLAGRTVDIEMARLRVLADPEQFRQEFASLVESAVAVAGPARSITVRVARTGQSARIDVVNEHDREEANDVIGTMTLPLAPGASSAADG*
Ga0066672_103070592	3300005167	Soil	MSVGSVDLLEELRAALDVLEPLIAGRIVDIEMSRLQVRADPGRFRREFASLIESALADAGPTESITVRVARTGKAAGITVVAEGNGAPSDGVIGSMSLPLVAGASSAADG*
Ga0066677_105738592	3300005171	Soil	VSEDQNTVDVLEQLRLALDDVEPLLAGRVIDIEMARLRVLIDPLLFRREFASLMKSAVADAEPTHSITVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA*
Ga0066683_108680941	3300005172	Soil	LAKRCWMRTSRSASPNPSCDLTVSEGQNAVDLLEQLRVALEDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGARSDRVIGSMTVPLAPGASSAADA*
Ga0066684_111032661	3300005179	Soil	VGSVDLLEELRAALDVLEPLLAGRVVDIEMSRLQVLADPGRFRREFASLIESALADAGPTESITVRVARTGKAAGITVVAEGDGAPSDGVIGSMSLPLVAGASSAADG*
Ga0066676_104260352	3300005186	Soil	LTSVDLLEELRAALDELEPLLAGRVVDIEMSRVRVLADRALFRREFSSLIESAVSDGEPAESITVRVARTGMAAEIEVVNEHGGAQSDVVVGSMRLRLVVGASSAADG*
Ga0066675_105157622	3300005187	Soil	MRTSRSASPNPSCDLTVSEGQNAVDLLEQLRVALEDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA*
Ga0068869_1005051452	3300005334	Miscanthus Rhizosphere	VSEAQSTVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLVESAVAEAEATQSITVRVARTGGAARIEVFADHDGAPSDLVVSSMTVPLAPGASSAADA*
Ga0070682_1011837161	3300005337	Corn Rhizosphere	VFGIEMSVTSVDLLEELRAALDGIEPLIADRIVDIEMARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSSARIDVGTEGDGTRLDEVIGSMTVPLAPGGSSAADA*
Ga0070709_106843152	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VFGIEMSVTSVDLLEELRAALDGIEPLLADRIVDIEIARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSSARIDVGTEGDGTRLDEVIGSMTVPLAPGGSSAADA*
Ga0070701_112015991	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	CELGRDLFVDDMAMTSVDLLEELRAALDAVEPLIVGRMVDIEMSRLRVLADPVLFRREFASLIESAVADAEPTQSITVRVARTGMSARINVINETDGERLDNVIGSMTLPLAPGGSSAADA*
Ga0070711_1002038622	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VFGIEMSVTSVDLLEELRAALDGIEPLIADRIVDIEMARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSSVRIDVGTEGDGTRLDEVIGSMTVPLAPGGSSAADA*
Ga0070708_1016121861	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTSVDLLEELRAPLDELEPLLAGRVVDIEMSRVRVLADRGLFRRQFSSLIESAVSDGEPAESITVRVARTGMAAEIEVVNEHGGAQSDVVVGSMRLRLVVGASSAADG*
Ga0066682_104559672	3300005450	Soil	LAKRCWTRTSRSASPKPSCDLTVSEDQSTVDLLEQLRVALDDVEPLLAGRIVDIEIARQRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGARSDRVIGSMTVPLAPGASSAADA*
Ga0066681_100655373	3300005451	Soil	LQSVDLLDELRAAFDELEPLLAGRIVDIEMSRVRVLADPVLFRREFASLIEFAVAETEPTASITVRVTRAGKAAKIEIVDERDGAPVDRVSGSMTLPLALDASSAADA*
Ga0070686_1011259282	3300005544	Switchgrass Rhizosphere	VFGIEMSVTSVDLLEELRAALDGIEPLIADRIVDIEMARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSLARIDVGTEGDGTRLDEVIGSMTVPLAPGGSSAADA*
Ga0066701_106835581	3300005552	Soil	MDVTSFDLLDELRAALDELEPLLAGRIVDIEMSRLRVLADSARFRREFVSLVESAVADAEPTYSVTVRVARKGKVARVEVFREGRDAQSDVAIGSMTLPLVPGGSSAADT*
Ga0066706_107778122	3300005598	Soil	VSEGQNAVDLLEQLRVALEDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA*
Ga0068859_1017668522	3300005617	Switchgrass Rhizosphere	MSATSVDLLEELRGALDRIEPLLAGRTVDIEMARLRVLADPEQFRQEFASLVESAVAVAGPARSITVRVARTGQSARIDVVNEHDREEANDVIGSMTLPLAPGTSSAADG*
Ga0066651_101432812	3300006031	Soil	MRTSRSASPNPSCDLTVSEGQNAVDLLEQLRVALGDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA*
Ga0075024_1004372881	3300006047	Watersheds	MSLTSVDLLEELRAALDGVEPLIAGRIVDIEMSRVRVLVDPVLFQREFASLIESAVADATPTHSITVRVTRTGKSTRIDVVNERDGERSDNLIGSMTLPLAPGASSAADA*
Ga0075017_1002503012	3300006059	Watersheds	VSEDQTTVDLLELLRVALDDVDPLLAGRIVDIEMARLRVLTDPMLFRREFASLIGSAVTDAEATQSITVRVARTGGAARIEVFADRDGAPSDRVVSSMTVPLAPGASSAADA*
Ga0075017_1011072401	3300006059	Watersheds	VSAGQNTVDLLEQLRVALDDVEPLLAGRIIDIEMARLRVVIDPLLFRRELASLMESAIADAEPTHSITVRVARTGGAARIEVFDDHDGAPSDRVIGSMTVPLAPGASSAADA*
Ga0070712_1017897112	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VFGIEMSVTSVDLLEELRAALDGIEPLIADRIVDIEMARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSSARIDVGTEGDGTRLD
Ga0074048_127556822	3300006581	Soil	VTSVDLLEELRGALDAVEPLIAGRIVDIEMARLRVLADPAPFRREFTSLVESAMAETEPSGPITVRVARTGKSARIDVVTERDAAGSDGGVIGSMTVPLAPGASSAPQA*
Ga0074062_118950922	3300006606	Soil	PSERADSQVAIVALDDIEPLLAGRIVDIEMARLRVLADPAPFRREFTSLVESAIGETEPSGSITVRVARTGKSARIDVVTERDAAGSDGGVIGSMTVPMAPGASSAAHA*
Ga0075425_1001397062	3300006854	Populus Rhizosphere	MPLTSVDLLEELRAALDGVEPLIAGRIVDIEMSRVRVLVDPVLFQREFASLIESAVADAAPAHSITVRVTRTGKSTRIDVVNEHDSERSGHVIGSMSVPLAPGASSAADA*
Ga0066710_1008626372	3300009012	Grasslands Soil	LTAVDLLEQLRAALDELEPLLGGRIVDIEMSRVRVLADPALFRREFALLIASAAADAEPTDSITVRVVRTGAAVRIEVVNERDGARLDGVTRSMAVPLAPGTSAAADA
Ga0066710_1040673651	3300009012	Grasslands Soil	RKSLAKRCWMRTSRSASPNPSCDLTVSEGQNAVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA
Ga0105242_113930802	3300009176	Miscanthus Rhizosphere	MSLTSVDLLEELRVALDGVEPLIAGRIIDIEMARLRVLADPVLFRQEFASLIESAVADTEPTRAITVRVARTGKSARIDVVNEGDGARLDDVIGSMTLPLAPGASSAADA*
Ga0105237_108857282	3300009545	Corn Rhizosphere	VFGIEMSVTSVDLLEELRAALDGIEPLLADRIVDIEMARLRVLADPVPFRQEFASLVESAVAMAGPSHPISVRVSRTGSSARIDVGTEGDGTRLDEVIGSMTVPLAPGGSSAADA*
Ga0126307_101218573	3300009789	Serpentine Soil	LNVSDDRNAVDLLEALRAALDDVEPLLAGRIVDIEMARLRVLIDPLLFRREFASLMESAIADAEPTHSITVRVARAGGAARIDVLNEHDGAPSDALIGSMTVPVAPGASSAADA*
Ga0126313_107350411	3300009840	Serpentine Soil	LRAALDDVEPLLAGRIVDIEMARLRVLIDPLLFRREFASLMESAVAEAEPTHPITVRVARTGGAVRIEVFDEHDGPPSDAVLGSMTVPLAPGASSAADA*
Ga0126310_103957622	3300010044	Serpentine Soil	VSEDQCTVDLLEQLRDALDDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLIESAVTDAEATQSITVRVARTRGAARIEVFADRDDAPSDRVVSSMTVPLAPGASSAADA*
Ga0126311_102715231	3300010045	Serpentine Soil	DDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLIESAVTDAEATQSITVRVARTGGAARIEVFADRDDAPSDCVVSSMIVPLAPGASSAADA*
Ga0126311_103907511	3300010045	Serpentine Soil	DDVEPLLAGRIVDIEMARLRVLIDPLLFRREFASLMESAIADAEPTHSITVRVARAGGAARIDVLNEHDGAPSDALIGSMTVPVAPGASSAADA*
Ga0126306_114486911	3300010166	Serpentine Soil	TSRFASPKPSCDLTVSEDQRTVDLLEQLRAALDDVEPLLAGRIVDIETARLRVLTDPVLFRREFASLIESAVTDAQATQSITVRVARTGGAARIEVFADRDDAPSDSLVSSMTVPLAPGASSAADA*
Ga0134063_106669382	3300010335	Grasslands Soil	VSEDQHAVDLLEQLRVALDDVEPLLAGRIVDIEMSRVRVLADPVSFRRQFVSLVESALADAEPTRPITVRVARTAKAVRIDVVNERGSTPAEGVIGSMTLPLPRGASSAADA*
Ga0134062_104911272	3300010337	Grasslands Soil	VSEGQNAVDLLEQLRVALDDVEPLLAGRIVDIEMARQRVLIDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA*
Ga0134128_115401922	3300010373	Terrestrial Soil	AALDGIEPLIADRIVDIEMARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSSARIDVGTEGDGTRLDEVIGSMTVPLAPGGSSAADA*
Ga0105239_107935623	3300010375	Corn Rhizosphere	MSLTSVDLLGEPRAALDEVEPLLVGRIVDIEMARLRVLADPVLFRREFAALVESAVADSEPARSITVRVARTGNTARIEVVDEHDSEPSDRVIGSMTVPLAPGASSAADA*
Ga0126350_109078841	3300010880	Boreal Forest Soil	LLAGRIVDIEMSRLRVLADPGVFRREFSLLIESAVAAADPTDSITVRVIRTGTAAKIEIINERAGARLDAATGTMTVHLAPGSSSAADA*
Ga0137376_101541941	3300012208	Vadose Zone Soil	VSEGQNAVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA*
Ga0137377_103936182	3300012211	Vadose Zone Soil	VSEGQNAVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLADPVLFSREFASLIDSAVTDAEPTHSLNVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA*
Ga0137366_111453271	3300012354	Vadose Zone Soil	MSLTSVDLLEELRTALDGVEPLIVGRIVDIEMARLRVLADPACFRREFSSLIEVAVAETEPTHSITVRVSRTGKSARIDVVSEGDGAGADDVIGSMNVPLAPGGSGA
Ga0137361_108902302	3300012362	Vadose Zone Soil	MSEGQNAVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVADAEPTHSITVRVARTGGAARIEVFNEHRGPSDRVIGSMTV
Ga0150984_1095718961	3300012469	Avena Fatua Rhizosphere	MSLTSVDLLEELRAALDDLEPLLAGRVVDIEMSRLRVLADPVLFRLEFALLIESAVSDAERTRSITVRVARTGKAAAIEVVSERSNARSDAVIGAMRLPLAPGASSAADA*
Ga0137398_108149362	3300012683	Vadose Zone Soil	MSLTSVDLLEELRAGLDELEPLLGGRIIDIEMSRVRVLADPVLFRREFASLIESAVTNAEPTHPITVRVARSGNAARIEVVNDHADARSDGKIRSMTVPLAPGASSAADA*
Ga0157306_103580392	3300012912	Soil	MPVTSVDLLEELRAALDGVEPLIADRIVDIEMSRLRVLADPVLFQREFASLIESAVADAAPTQSITVRVSRTGKSTRIDVVNEHDGERSDNVIGSMTLPIAPGASSAADA*
Ga0137396_112798571	3300012918	Vadose Zone Soil	MSLTSVDLLEQLRSGLDELEPLLAGRIVDIEMARLRVLADPARFRQEFASLFESAVADAGPTDSLTVRVTRTGKVARIEVVNEHANARLDSEIPSMTVPLVPGGSSTADT*
Ga0137394_108672213	3300012922	Vadose Zone Soil	EPLLAGRIVDIEMARLRVIADPARFRQEFASLFESAVGDAQPTDSLTVRVTRTGKVARIEVVNEHADARLDSEIPSMTVPLVPGGSSTADT*
Ga0137359_117504472	3300012923	Vadose Zone Soil	SEGQNAVDLLEQLRFALDDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHRGPSDRVIGSMTVPLAPGASSAADA*
Ga0137416_114268381	3300012927	Vadose Zone Soil	LLAGRIVDIEMARLRVLADPARFRQEFASLFESAVADAGPTDSLTVRVTRTGKVARIEVVNEHANARLDSEIPSMTVPLVPGGSSTADT*
Ga0137404_105402401	3300012929	Vadose Zone Soil	MSVTSVDLLEELRAALDGVEPLIAGRIVDIEMARVRVLADPVLFQREFASLIESAVADAAPTHSITVRVTRTGKSTRIDVVNEHDGERSDNVIGSMTLPLAPGASSAANG*
Ga0134087_106991731	3300012977	Grasslands Soil	VSEGQNAVDLLEQLRVALEDVEPLLAGRIVDIEMSRVRVLADPVLFRREFASLIESVLADAEPTHSITVRVVRTGKRVRIEVANERASAALHGGTPSMTVPLAPGASS
Ga0157374_109178442	3300013296	Miscanthus Rhizosphere	MSRPSVDLLEELRAALDAVEPLIVGRMVDIEMSRLRVLADPVLFRREFASLIESAVADAEPTQSITVRVARTGMSARINVINETEGEKLDNAIGSMTLPLAPGGSSAADA*
Ga0163162_132452381	3300013306	Switchgrass Rhizosphere	LEPLLDGRMVDIEMSRLRVLADPVLFRREFASLIESAVADAEPTQSITVRVARTGMSARINVINETEGEGLDNAIGSMTLPLAPGGSSAADA*
Ga0157375_125041191	3300013308	Miscanthus Rhizosphere	MSLTSVDLLDELRAALDDIEPLLAGRIVDIEMARLRVLADPAPFRREFTSLVESALAETEPSGSITVRVARTGKSARIDVVTERDAAGSDGGVIGSMTVPMAPGASSAAHA*
Ga0120172_11592232	3300013765	Permafrost	MTLTPVDLLEELRAALDELEPLLAGRIVDIEMSRLRVLADSAQFRREFVSLIESAVADAESTHPITVRVARTGKVARLEVVNERRDARLDVLIGSMTLPLASGASSAADT*
Ga0120158_100223845	3300013772	Permafrost	MSLTAIDLLEELRAPLDGLEPLLAGRVVDIEMSRVRVLADPQLFLREFAVLMASAVADAEPTDSITVRVARTGAAVRIEVVNERVGARSGGATGPMTLPLAPGASSAADA*
Ga0163163_126396751	3300014325	Switchgrass Rhizosphere	MRSVDLLEELRAALDAVEPLIVGRMVDIEMSRLRVLADPVLFRRQFASLIESAVADAEPTQSITVRVARTGMSARINVINETEGEGLDNAIGSMTLPLAPGGSSAADA*
Ga0182008_107888442	3300014497	Rhizosphere	MPLTSVDLLEQLRAALDGVEPLIADRIVDIEMARLRVLTDPLLFRREFASLMESAVADAEPTHSITVRVAQIGGVARIEVFGEHDGAPSDRVVASMTVPLAPGAHGSLSIVPIH
Ga0182024_1003206711	3300014501	Permafrost	MSSTAVDLLEQLRVALDELEPLLAGRIVDIEMSRLRVLADPERFRQEFTLLIASAVADAQPTDSITVRVARTGTAARIEVLNERASARLDAETGSMTVPLAPGTSSAADA*
Ga0167648_10176002	3300015171	Glacier Forefield Soil	MSLTSVDLLEELRAALDEVEPLIVGRIVDIEMSRVRVFADPVLFRREFASLIESAVADMEPTKSITVRVTRTGKSTRIDVVDESDGERLDDVLGSMTLSLASGGSSAADT*
Ga0167646_10297663	3300015192	Glacier Forefield Soil	MSLTSVDLLEELRAALDGVEPLIVGRIVDIEMSRLRVLADPVLFRREFASLIESAVADTEPTQSITVRVTRTGKSARIDVVNESDGERLDDVIGSMTLSLASGGSSAADA*
Ga0180121_100867121	3300017695	Polar Desert Sand	MSLTSVDLLEELRAALDDLEPLLAGRIVDIEMSRVRVLADPVLFRREFASLVESVVANAAPTHSITVRVARTGKGARIEVFTERGGAPLDGVIGSMTVPLVPGASSAADA
Ga0190266_110013621	3300017965	Soil	RSSSSNKLATAPRQPPKLTMAWRTALAKRCWTRTSRFASPKPSCDLTVSEDQCAVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLIESAVTDAEATQSITVRVARTGGAARIEVFADRDDAPSDRVVSSMTVPLAPGASSAADA
Ga0190265_104482572	3300018422	Soil	VSEGQSTVELLEQLRAALDDVEPLLGGCIVDIEMARLRVLTDPARFRREFASLIESAVADAESTHSITVRVARTGGAARIDVFDDHEGGPSDGVIGSMTVPLAPGASSAADA
Ga0190265_118084932	3300018422	Soil	VPGYCHQMPLTSVDLLEQLRAALDELEPLLAGRIVDIEMSRLRVFADPDLFRQEFSSLIESAVADAEPTDSVTVRVTRTGKGALVEVVNERGGERLDAVIGSTTVPLVPGASSAPD
Ga0190265_126653931	3300018422	Soil	MSLTSVDLLEELRAALDGVEPLIAGRIVDIEMSRLRVLVDPVLFQREFASLIESAVADAAPTLSITVRVTRTGKSTRIDVVNQRDGEPLDNLIGSMTLPLAPGTSSAADA
Ga0190275_134287732	3300018432	Soil	DLLEQLRVAFDDVEPLLAGRIVDIEMARLRVLTDPVTFRREFASLIESAVADAEATQSITVRVARTGGAARIEVFADRDGAPSDRVVSSMTVPLAPGGSSAADA
Ga0190270_100987732	3300018469	Soil	VSDDQCTVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLIESAVTDAEATQSITVRVARTGGAARIEVFADHDGAPSDRVVSSMTVPLAPGASSAADA
Ga0190270_115348952	3300018469	Soil	MSETSVDLLEALRAALDEVEPLIAGRIVDIEMARLRVLVDPSSFRPEFASLIEAAVADTEPNHPLTVRVTKAKAGARIDVLDEREGAAADGVVGSITLPLAPGGSSAADA
Ga0190274_121865772	3300018476	Soil	VTVSEDQCTVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLIESAVTDAEATQSITVRVARTGGAARIDVFADHDGAPSDRMVSSMTVPLAPGA
Ga0190271_112897311	3300018481	Soil	LRLSSSNKLATAPRQPPKLTMAWRTVLAKRCSTRTSRSASPKPSCDLTVSEDQCTVDLLEQLRVALDDVEPLLAGRIVDIEMARLRVHTDPVLFRREFASLIESAVTDAEATQSITVRVTRAGGAARIDVFADRDGAPSDRVVSSMTVPLAPGASSAADA
Ga0066669_110268922	3300018482	Grasslands Soil	VSEGQNAVDLLEQLRVALEDVEPLLAGRIVDIEMARLRVLTDPVLFSREFASLIESAVTDAEPTHSITVRVARTGGAARIEVFNEHDGAPSDRVIGSMTVPLAPGASSAADA
Ga0210384_105800063	3300021432	Soil	MSLAAVDLLEQLRAALDELEPLVAGRIVDIEMSRLRVLADPPLFRQEFTLLIASAVADAQPTDSITVRVARTGTAAKIEVLNEHASAQLNAETGSMTVPLAPGSSSVADA
Ga0208078_10168413	3300025544	Arctic Peat Soil	MPLTAIDLLEQLRAALDEIEPLLVGRIVDIEMSRVRVLADPGLFRREFALLLASAVADAEPTESITVRVARTGTVARIELVNERGGARLDGVTGSMTVPLAPGASSAADA
Ga0207671_106181912	3300025914	Corn Rhizosphere	VFGIEMSVTSVDLLEELRAALDGIEPLLADRIVDIEMARLRVLADPVPFRQEFASLVESAVAMAGPSHPISVRVSRTGSSARIDVGTEGDGTRLDEVIGSMTVPLAPGGSSAADA
Ga0207693_106615791	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VFGIEMSVTSVDLLEELRAALDGIEPLIADRIVDIEMARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSSARIDVGTEGDGTRLDEVIGS
Ga0207646_107366631	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSLTSVDLLEELRAALDGVEPLIAGRIVDIEMSRLRVLVDPVLFQREFASLIESAVADAAPTHSITVRVTRTGKSTRIDVVNEHDGERSDNLIGSMTLP
Ga0207686_112018872	3300025934	Miscanthus Rhizosphere	MSLTSVDLLEELRVALDGVEPLIAGRIIDIEMARLRVLADPVLFRQEFASLIESAVADTEPTRAITVRVARTGKSARIDVVNEGDGARLDDVIGSMTLPLAPGASSAADA
Ga0207689_111903622	3300025942	Miscanthus Rhizosphere	QLRVALDDVEPLLAGRIVDIEMARLRVLTDPVLFRREFASLIESTVAEAEATQSITVRVARTGGAARIEVFADHDGAPSDLVVSSMTVPLAPGASSAADA
Ga0207702_117523981	3300026078	Corn Rhizosphere	EMSVTSVDLLEELRAALDGIEPLIADRIVDIEMARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSSARINVGTEGDGTRLEEVIGSMTVPLAPGGSSAADA
Ga0209056_105717561	3300026538	Soil	VSLTSVDLLEELRAALDELEPLLAGRVVDIEMSRVRVLADRGLFRREFSSLIESAVSEGEPAESITVRVARTGMAAEIEVVNERGGARSDVVVGSMRLRLVVGA
Ga0268266_117126761	3300028379	Switchgrass Rhizosphere	VFGIEMSVTSVDLLEELRAALDGIEPLIADRIVDIEMARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSSARIDVGTEGDGTRLDEVIGSMTVPLAPGGSSAADA
Ga0137415_110028641	3300028536	Vadose Zone Soil	LLAGRIVDIEMARLRVLADPARFRQEFASLFESAVADAGPTDSLTVRVTRTGKVARIEVVNEHANARLDSEIPSMTVPLVPGGSSTADT
Ga0310901_106032832	3300031940	Soil	MSLTSVDLLEELRGALDRIEPLLAGRTVDIEMARLRVLADPEQFRQELASLVESAVAVAGPARSITVRVARTGQSARIDVVNEHDREEANDVIGSMTLPLAPGTSSAADG
Ga0310890_116110451	3300032075	Soil	MSLTSVDLLEELRGALDRIEPLLAGRTVDIEMARLRVLADPEQFRQEFASLVESAVAVAGPARSITVRVARTGQSARIDVVNEHDREEANDVIGTMTLPLAPGASSAADG
Ga0310890_118089662	3300032075	Soil	MSLTSIDLLNELRAALDDIEPLLAGRIVDIEMARSRVLADPALFRREFTSLVESALAETEPSGSITVRVARTGKSARIDVVTERDAAGSDGIAIGSMTVPLAPGASSAPHA
Ga0307471_1033619611	3300032180	Hardwood Forest Soil	VFGIEMSVTSVDLLEELRAALDGIEPLIADRIVDIEMARLRVLADPVPFRQEFASLVESAVAVAGPSHPISVRVSRTGSSARIDVGTEGDGTRLDEVIGSMTVPLAPG
Ga0315271_104941471	3300032256	Sediment	MSLTSVDLLEELRAALDGVEPLIAGRIVDIEMSRVRVLVDPVLFQREFASLIESAVADAAPTHSITVRVTRTGKSTRIDVVNERDGERSDALIGSMTLPLAPGASSAADA
Ga0370484_0057069_309_641	3300034125	Untreated Peat Soil	MSLTTIDLLEQLRAALDELEPLLGGRIVDIEMSRVRVLADPGLFRREFALLLASAVADAEPTDSITVRVARTGTVARIELVNERGGAQLDGVTGSMTVPLAPGASSAADA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101602

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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