Metagenome Family F101629

Basic Information
Family ID	F101629
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	80 residues
Representative Sequence	AYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD
Number of Associated Samples	92
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	2.94 %
% of genes from short scaffolds (< 2000 bps)	2.94 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Unclassified (97.059 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.745 % of family members)
Environment Ontology (ENVO)	Unclassified (30.392 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.196 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 38.83% Coil/Unstructured: 61.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03401	TctC	22.55
PF00924	MS_channel	20.59
PF12831	FAD_oxidored	10.78
PF00501	AMP-binding	5.88
PF01471	PG_binding_1	5.88
PF15975	Flot	1.96
PF05988	DUF899	0.98
PF04321	RmlD_sub_bind	0.98
PF10282	Lactonase	0.98
PF01842	ACT	0.98
PF00565	SNase	0.98
PF13472	Lipase_GDSL_2	0.98
PF05552	TM_helix	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	22.55
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	21.57
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	21.57
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.96
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.96
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.96
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.98
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
All Organisms	root	All Organisms	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
cellular organisms	root	All Organisms → cellular organisms	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.94 %

Scaffold	Taxonomy	Length	IMG/M Link
3300007004\|Ga0079218_10325038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1265	Open in IMG/M
3300012359\|Ga0137385_10823711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	770	Open in IMG/M
3300012984\|Ga0164309_11279531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	619	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.47%
Host-Associated	Host-Associated	23.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	23.53%
Aquatic	Environmental → Aquatic	9.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.69%
Sediment	Environmental → Aquatic → Sediment	7.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.86%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Floodplain	Environmental → Terrestrial → Floodplain	0.98%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.84%
Loam	Environmental → Terrestrial → Soil → Loam	6.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Sand	Environmental → Terrestrial → Soil → Sand	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.98%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.98%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1007628281	3300000955	Soil	DIGGNRTKERLAFQPNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
JGI10216J12902_1217418111	3300000956	Soil	NKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD*
Ga0063356_1004874075	3300004463	Arabidopsis Thaliana Rhizosphere	KRSTERLVFQPNGLVTQTPGKQARWRVQNETLEFSRDGLSWTQEPLRLALNSSGSPVLQAHDKEYAQCD*
Ga0062591_1006647301	3300004643	Soil	WCSFAYDIGGNRTKERLAFMQNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0062591_1017134771	3300004643	Soil	KERLAFNPNGLVSQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0066680_100436761	3300005174	Soil	NAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALNASGSAVLQSQDKEYAQCD*
Ga0066388_1013339141	3300005332	Tropical Forest Soil	LTRNAWCSFAYDIGGNRNKERLVFMANGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD*
Ga0070680_1016805522	3300005336	Corn Rhizosphere	AWCSAAYDISGKRSVDRLLFMPNGLVNQTPGGQARWRVQNETLEFSADGLSWSPQPLRLALSSSGSAILQSHNRQYTQCD*
Ga0070669_1011160801	3300005353	Switchgrass Rhizosphere	KLPAKVAVQDGELGRALTRNAWCSFAYDIGGNRTKERLAFMQNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0070705_1002843512	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LVNQTGGAQTRWRVQNESLEFSRDGVSWSQQPLRLALSSTGSPMLQSQGKEYLQCD*
Ga0066689_101450001	3300005447	Soil	GLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALNASGSAVLQSHDKEYAQCD*
Ga0066682_106351941	3300005450	Soil	NMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSAQPLRLALNASGSAVLQSQDKEYAQCD*
Ga0066681_105849521	3300005451	Soil	NAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALNASGSAVLQSHDKEYAQCD*
Ga0066692_105332261	3300005555	Soil	TRNAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALNASGSAVLQSQDKEYAQCD*
Ga0066704_109356901	3300005557	Soil	SGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALSSSGSAVLQSHDKEYAQCD*
Ga0068852_1026243202	3300005616	Corn Rhizosphere	LPAKVAVQDGELGRALTRNAWCSFAYDIGGNRTKERLAFMQNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0066651_104741232	3300006031	Soil	MERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALNASGSAVLQSHDKEYAQCD*
Ga0070712_1010133241	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYAQCD*
Ga0097621_1011850872	3300006237	Miscanthus Rhizosphere	AYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD*
Ga0075421_1012478301	3300006845	Populus Rhizosphere	TQNAWCSFAYDISGNRKMERMVFMPNGLVNQTPGRQARWRVQNETLELSSDGISWTPQPLRLALNSSGSAILQSHNREYAQCD*
Ga0075421_1026791132	3300006845	Populus Rhizosphere	NAWCSFAYDIGGNRTKERLAFTPNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0075420_1008189112	3300006853	Populus Rhizosphere	NAWCSFAYDIGGNRTKERMVFMSNGLVNQTPGKQARWRVQNETLELSADGVSWTPQPLRLGLSSSGSAVLQSHNKEYTQCD*
Ga0079217_100289611	3300006876	Agricultural Soil	TELRLARMETKLAPQSLKLGQALTANAWCSAAYDISGKRMMERLAFLPNGLVQQSPGGQARWRVQNETLEFSRDGVSWSPQPLRLALSSTGSPLLQSHSKEYQQCD*
Ga0079215_113672851	3300006894	Agricultural Soil	RNAWCSAGYDISGKRTLERLVFMPNGLVNQTPGRQARWRVQNETLEFSRDGISWSPQPLRLALSLSGSPVLQSHNKEYLQCD*
Ga0075424_1021388821	3300006904	Populus Rhizosphere	FMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSGGNAVLQSHNKEYSQCD*
Ga0079216_104712801	3300006918	Agricultural Soil	NAWCSFAYTISGKLGKERLEFMRNGTVSEAGQPARWRVQNETLEFSRDGVSWKPEPLRLALSSSGSPVLRAQGKEYVQCD*
Ga0079216_109750012	3300006918	Agricultural Soil	ARMETKLAPQSLKLGQALTANAWCSAAYDISGKRMMERLAFLPNGLVQQSPGGQARWRVQNETLEFSRDGVSWSPQPLRLALSSTGSPLLQSHSKEYQQCD*
Ga0079216_112991011	3300006918	Agricultural Soil	TISGKLGKERLEFMRNGTLSEAGKPARWRVQNETLEFSRDGVSWKPEPLRLALSSSGSPVLRAQGKEYVQCD*
Ga0075419_105862102	3300006969	Populus Rhizosphere	GNRTKERLAFTPNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0079218_103250381	3300007004	Agricultural Soil	SELRLAKAQAKTAPHNQRLSQALTRNSWCSSGYDISGKRELERLVFMPNGLVNQTPGRQARWRVQNETLELSRDGISWSPQSLRLALSSSGSPVLQSHNKEYVQCD*
Ga0079218_131217161	3300007004	Agricultural Soil	SLRLGKALTANAWCSAAYDISGKRMMERLAFLPNGFVNQSPGGQARWRVQNETLEFSRDVVSWSPQPLRLALSSTGSPMLQSHSKEYQQCD*
Ga0099793_103996651	3300007258	Vadose Zone Soil	ISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALSSSGSAVLQSHDKEYAQCD*
Ga0099827_102948283	3300009090	Vadose Zone Soil	CSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALSSSGSAVLQSHDKEYAQCD*
Ga0111539_106503861	3300009094	Populus Rhizosphere	LPAKVAAQDGELSRALTRNAWCSFAYDIGGNRTKERLAFNPNGLVSQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0105245_124931442	3300009098	Miscanthus Rhizosphere	GRALTRNAWCSFAYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD*
Ga0075418_119961111	3300009100	Populus Rhizosphere	KSSPQSARLSQALTLNAWCSFAYDIGGNRTKERMVFMSNGLVNQTPGKQARWRVQNETLELSADGVSWTPQPLRLGLSSSGSAVLQSHNKEYTQCD*
Ga0114129_117619201	3300009147	Populus Rhizosphere	RNKERLVFMSNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0075423_122368633	3300009162	Populus Rhizosphere	CSFSYNISGNRNMERLVFSRSGLVTQTPGKSAHWRVQNETLEFSPDGIAWSAQPLRLTLSSSGSPVLQSHDKEYSQCN*
Ga0134070_100377061	3300010301	Grasslands Soil	FTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSAQPLRLALNASGSAVLQSHDKEYAQCD*
Ga0134127_102372542	3300010399	Terrestrial Soil	FMPNGLVNQTPGKQARWRVQNETLEFSADGLSWSPQPLRLALSSSGSAILQSHNRQYTQCD*
Ga0134127_126404912	3300010399	Terrestrial Soil	CSAAYDISGKRSVDRLLFMPNGLVNQTPGGQARWRVQNETLEFSRDGVSWSPQPLRLALSSTGSPMLQSHSKEYQQCD*
Ga0134123_113049291	3300010403	Terrestrial Soil	WCSFAYDIGGNRNKERLAFMQNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0134123_119534711	3300010403	Terrestrial Soil	FAYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0137323_10834221	3300011409	Soil	LRLAKTETKSTPQSQRLSQALTASPWCAAAYDISGKRGLERLVFMPNGLVNQMPGGQARWRVQNETLEFSRDGFSWSPQPLRLALSSNGSPVLQSQGKEYLQCD*
Ga0137432_11274361	3300011439	Soil	RNLERLAFMPNGLVNQTPGKQARWRVQNETLEFSSDGVSWAPQPLRLALSSSGSPVLQSHNKEYLQCD*
Ga0137433_12737831	3300011440	Soil	NGFVNQTPGGQARWRVQNETLEFSRDGVSWSPQPLRLALSSTGSPMLQSHSKEYQQCD*
Ga0150985_1060547542	3300012212	Avena Fatua Rhizosphere	GNRAKERLAFNPNGLVSQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYSQCD*
Ga0137385_108237111	3300012359	Vadose Zone Soil	ELRLAKAQAKTAPQNERLSEALTRNAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALNASGSAVLQSHDKEYAQCD*
Ga0150984_1102630131	3300012469	Avena Fatua Rhizosphere	LAFNPNGLVSQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYSQCD*
Ga0137397_106122821	3300012685	Vadose Zone Soil	RSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALSSSGSAVLQAHDKEYAQCD*
Ga0137396_103717092	3300012918	Vadose Zone Soil	NMERLVFTRSGLVNQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALSSSGSAVLQSHDKEYAQCD*
Ga0137396_112750541	3300012918	Vadose Zone Soil	NRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGITWSPQPLRLALNASGSAVLQSHDKEYAQCD*
Ga0137416_112299472	3300012927	Vadose Zone Soil	AKAQAKTAPHNERLSEALTRNAWCSFTYNISGNRNMERLVFTRSGLVNQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALSSSGSAVLQSHDKEYAQCD*
Ga0137416_113091171	3300012927	Vadose Zone Soil	AKTAPHNERLSEALTRNAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGITWSPQPLRLALNASGSAVLQSHDKEYAQCD*
Ga0164309_112795312	3300012984	Soil	PQRARELRLARLPAKVAVQDGELSRALTRNAWCSFAYDIGGNRAKERLAFNPNGLVSQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHSREYTQCD*
Ga0180090_10395971	3300014866	Soil	WCSFAYDISGNRTKERMVFMSNGLVNQTPGKQARWRVQNETLELSADGVSWAPQPLRLALSSSGSAILQSHNKEYAQCD*
Ga0180064_11290831	3300014876	Soil	QSQRLSQALTASPWCAAAYDISGKRGLERLVFMPNGLVNQMPGGQARWRVQNETLGFSRDGFSWSPQPLRLALSSNGSPVLQSQGKEYLQCD*
Ga0180062_11233322	3300014879	Soil	ALTLNAWCSFAYDISGNRTKERMVFMSNGLVNQTPGRQARWRVQNETLELSADGVSWAPQPLRLALSSSGSAILQSHNKEYAQCD*
Ga0137420_14279171	3300015054	Vadose Zone Soil	AAIGGNRNMERLVFTRSGLVKQTPGKQAHWRVRNETLEFSPDGISWSPQPLRLALNASGSAVLQSHDKEYAQCD*
Ga0132255_1019025291	3300015374	Arabidopsis Rhizosphere	AVQDGELSRALTRNAWCSFAYDIGGNRTKERLAFTPNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD*
Ga0184604_102635281	3300018000	Groundwater Sediment	GNPNKERLVFMPNGLVNQTPGRQAHWRVQNETLEFSPDGMTWSPQPLRLALSSSGSAVLQSYNKEYAQCD
Ga0184619_102955201	3300018061	Groundwater Sediment	TRNAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALSSSGSAVLQSHDKEYAQCD
Ga0190265_105235811	3300018422	Soil	LVFMKNGLVNQTHGRQARWRVQNETLEFSSDGISWSPQPLRLALSSSGSPVLQSHTKEYSQCD
Ga0179594_102609021	3300020170	Vadose Zone Soil	LAKAQAKTAPHNERLSEALTRNAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALNASGSAVLQSHDKEYAQCD
Ga0196963_102103942	3300020215	Soil	KRAPQNLRLSEALTANAWCSSGYDIGGKPTRERLLFMQNGLVHQTPGRQARWRVQNETLEFSRDGLSWSPEPLRLALNSSGSPMLKAHDKEYVQCD
Ga0210380_104001392	3300021082	Groundwater Sediment	QDGELSRALTRNAWCSFAYDIGGNRSKERLAFNPNGLVSQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD
Ga0179596_105512652	3300021086	Vadose Zone Soil	TRNAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALSSGGSAVLQSHDKEYAQCD
Ga0247694_10209021	3300024178	Soil	YDIGGNRTKERLAFTPNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD
Ga0247665_10040083	3300024219	Soil	RLAKLPAKVALQEGELSRALTRNAWCSFAYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD
Ga0247673_10062093	3300024224	Soil	EGELSRALTRNAWCSFAYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD
Ga0247666_10945272	3300024323	Soil	KLPAKVALQEGELSRALTRNAWCSFAYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD
Ga0137417_14292951	3300024330	Vadose Zone Soil	MERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGITWSPQPLRLALNASGSAVLQSHDKEYAQCD
Ga0207684_110572962	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SEALTRNAWCNFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGITWSPQPLRLALSSSGSAVLQSPDKEYAQCD
Ga0207693_105543822	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	NKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYAQCD
Ga0207687_114896861	3300025927	Miscanthus Rhizosphere	NRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD
Ga0207689_115828472	3300025942	Miscanthus Rhizosphere	RNAWCSFAYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD
Ga0207674_116281931	3300026116	Corn Rhizosphere	PAKVAVQDGELGRALTRNAWCSFAYDIGGNRTKERLAFMQNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD
Ga0209474_101301461	3300026550	Soil	ALTRNAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGISWSPQPLRLALNASGSAVLQSHDKEYAQCD
Ga0209730_10178231	3300027034	Forest Soil	LVFTRSGLVNQTPGKHAHWRVQNETLEFSPDGISWSPQPLRLTLNSSGSAVLQSPDKEYAQCD
Ga0209818_11507042	3300027637	Agricultural Soil	LPNGLVQQSPGGQARWRVQNETLEFSRDGVSWSPQPLRLALSSTGSPLLQSHSKEYQQCD
Ga0209818_12335472	3300027637	Agricultural Soil	RLVFMPNGFVRQTPGAQARWRVQNETLEFSPDGLTWSQQPLRLALSSSGSPLLQSHSKEYLQCD
Ga0209076_12198492	3300027643	Vadose Zone Soil	QAKTAPQNKRLSEALTRNAWCSFTYNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGITWSPQPLRLALNASGSAVLQSHDKEYAQCD
Ga0256866_12153191	3300027650	Soil	ELRLLRAQAKTAPQNEALRQALTRNAWCSVAYTISGKRSMERLVFRDNGLVTQTPAKQARWRVQNETLEFSRDGISWSPEPLRLGLSSSGSPVLQTHDREYAPCD
Ga0209485_12299441	3300027691	Agricultural Soil	ISGKLGKERLEFMRNGTLSEAGKPARWRVQNETLEFSRDGVSWKPEPLRLALSSSGSPVLRAQGKEYVQCD
Ga0209703_11034862	3300027723	Freshwater Sediment	ISGKVSRERLQFMPDGVVNQTPGKLARWRVQNEILEFSRDGTRWAREPLQLALSSSGSPVLRGYGKEYLQCD
Ga0209382_112919451	3300027909	Populus Rhizosphere	RNAWCSFAYDIGGNRTKERLAFTPNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD
Ga0247685_10092692	3300028065	Soil	ALTRNAWCSFAYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD
Ga0268264_113145761	3300028381	Switchgrass Rhizosphere	ELRLAKLPAKVALQEGELSRALTRNAWCSFAYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNKEYSQCD
Ga0299907_109766272	3300030006	Soil	NGLVTQTPAKQARWRVQNETLEFSRDGISWSAEPLRLGLSSNGSPVLQTHDKEYAQCD
Ga0307496_101476722	3300031200	Soil	RLAFMANGLVSQTPGKQSRWRVQNETLELSADGLSWTPQPLRVGLSSSGNAILQSHNKEYSQCD
Ga0307408_1011665022	3300031548	Rhizosphere	AKVTPHNQQLTQALTKKPWCSYTYNISGNRKMERLVFMPNGLVNQTPGKQARWRVQNETLEFSPDGINWSAHAMRIGLSSSGSPVLQSYDKEYAQCD
Ga0307468_1002162552	3300031740	Hardwood Forest Soil	LAFMSNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD
Ga0307477_101468661	3300031753	Hardwood Forest Soil	YNISGNRNMERLVFTRSGLVKQTPGKQAHWRVQNETLEFSPDGITWSPQPLRLALSSSGSAVLQSPDKEYAQCD
Ga0310892_108639471	3300031858	Soil	VAVQDGELSRALTRNAWCTFAYDIGGNRNKERLVFMPNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD
Ga0310884_101012393	3300031944	Soil	AFTPNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD
Ga0310890_104805752	3300032075	Soil	RMVFMSNGLVNQSPGKQARWRVQNETLELSADGVSWTPQPLRLGLSSSGSAVLQSHNKEYTQCD
Ga0307470_101459361	3300032174	Hardwood Forest Soil	MVFMSNGLVNQTPGKQARWRVQNETLELSADGVSWTPQPLRLGLSSSGSAVLQSHNKEYTQCD
Ga0307471_1042908242	3300032180	Hardwood Forest Soil	DIGGNRTKERLAFQSNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD
Ga0307472_1024467921	3300032205	Hardwood Forest Soil	VAVQDGELSRALTRNAWCSIAYDIGGNRNKERLVFMSNGQVMQTPGKQSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD
Ga0214472_109540461	3300033407	Soil	VKTAPQNDQLRQALTRNAWCNAGYTIGGKRSLERLEFQRNGLVTQTPGKQARWRVQNETLEFSRDGLSWSAEPLRLGLGSNGSPVLQGHDKEYSQCD
Ga0364929_0150201_3_236	3300034149	Sediment	SFAYDISGSRTKERMVFMSNGLVNQTPGKQARWRVQNETLELSADGVSWTPQPLRLGLSSSGSAVLQSHNKEYTQCD
Ga0373950_0149689_3_284	3300034818	Rhizosphere Soil	VQDGELSRALTRNAWCSFAYDIGGNRTKERLAFMQNGLVNQTPGKTSRWRVQNETLELSADGLSWTPQPLRLGLSSSGNAVLQSHNREYTQCD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101629

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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