Metagenome Family F101639

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101639
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	64 residues
Representative Sequence	MLVCATCGSRWDEDARLATMLPAAVCPICEGALVELDEAPLDDGEPVHADVARVLREHLLGVGA
Number of Associated Samples	90
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.35 %
% of genes near scaffold ends (potentially truncated)	23.53 %
% of genes from short scaffolds (< 2000 bps)	95.10 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.647 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (34.314 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.078 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.39% β-sheet: 10.87% Coil/Unstructured: 71.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13011	LZ_Tnp_IS481	1.96
PF00106	adh_short	0.98
PF09695	YtfJ_HI0045	0.98
PF00296	Bac_luciferase	0.98
PF00005	ABC_tran	0.98
PF03033	Glyco_transf_28	0.98
PF00905	Transpeptidase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.65 %
Unclassified	root	N/A	32.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.65 %
Unclassified	root	N/A	32.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.65 %
Unclassified	root	N/A	32.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.80 %
Unclassified	root	N/A	32.35 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.98 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	59.80 %
Unclassified	root	N/A	32.35 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	43.14 %
Unclassified	root	N/A	32.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.35 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	23.53 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	16.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.98 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.35 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	17.65 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	16.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.98 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.35 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	17.65 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	16.67 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.35 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	17.65 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	16.67 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_114468212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300001686\|C688J18823_10018330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4686	Open in IMG/M
3300002568\|C688J35102_119632277	Not Available	736	Open in IMG/M
3300004114\|Ga0062593_100233192	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300004479\|Ga0062595_102009332	Not Available	559	Open in IMG/M
3300004643\|Ga0062591_102782947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	518	Open in IMG/M
3300005338\|Ga0068868_101240709	Not Available	691	Open in IMG/M
3300005344\|Ga0070661_100540147	Not Available	937	Open in IMG/M
3300005366\|Ga0070659_100970970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	745	Open in IMG/M
3300005455\|Ga0070663_100888521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	769	Open in IMG/M
3300005539\|Ga0068853_102070224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	552	Open in IMG/M
3300005546\|Ga0070696_100492638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	974	Open in IMG/M
3300005564\|Ga0070664_102033756	Not Available	545	Open in IMG/M
3300005578\|Ga0068854_101478213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	616	Open in IMG/M
3300005614\|Ga0068856_100091056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3034	Open in IMG/M
3300005614\|Ga0068856_100696265	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300005615\|Ga0070702_100883919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	698	Open in IMG/M
3300005841\|Ga0068863_102271514	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300006175\|Ga0070712_100593579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	937	Open in IMG/M
3300006358\|Ga0068871_101748872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	590	Open in IMG/M
3300006804\|Ga0079221_10886810	Not Available	653	Open in IMG/M
3300006954\|Ga0079219_10226926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300009162\|Ga0075423_13210254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	501	Open in IMG/M
3300010320\|Ga0134109_10167911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	797	Open in IMG/M
3300010326\|Ga0134065_10501287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	506	Open in IMG/M
3300010396\|Ga0134126_11863993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	658	Open in IMG/M
3300010399\|Ga0134127_11775896	Not Available	693	Open in IMG/M
3300010400\|Ga0134122_10917049	Not Available	849	Open in IMG/M
3300012201\|Ga0137365_10402381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1010	Open in IMG/M
3300012204\|Ga0137374_10266712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1425	Open in IMG/M
3300012204\|Ga0137374_11072212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300012285\|Ga0137370_10927905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	538	Open in IMG/M
3300012350\|Ga0137372_10161883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1819	Open in IMG/M
3300012353\|Ga0137367_11088678	Not Available	540	Open in IMG/M
3300012356\|Ga0137371_10890341	Not Available	677	Open in IMG/M
3300012912\|Ga0157306_10366507	Not Available	552	Open in IMG/M
3300012988\|Ga0164306_10562763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	887	Open in IMG/M
3300012989\|Ga0164305_11908187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	539	Open in IMG/M
3300013297\|Ga0157378_12487121	Not Available	570	Open in IMG/M
3300013307\|Ga0157372_11532210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	768	Open in IMG/M
3300015077\|Ga0173483_10535432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	631	Open in IMG/M
3300015371\|Ga0132258_11380945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1780	Open in IMG/M
3300015371\|Ga0132258_11940532	Not Available	1482	Open in IMG/M
3300015371\|Ga0132258_12766896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1222	Open in IMG/M
3300015371\|Ga0132258_13328861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1105	Open in IMG/M
3300015373\|Ga0132257_100253560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2101	Open in IMG/M
3300015374\|Ga0132255_105488229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	537	Open in IMG/M
3300017965\|Ga0190266_10463874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	726	Open in IMG/M
3300018028\|Ga0184608_10081984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1323	Open in IMG/M
3300018051\|Ga0184620_10132504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	794	Open in IMG/M
3300018051\|Ga0184620_10269374	Not Available	572	Open in IMG/M
3300018061\|Ga0184619_10453879	Not Available	571	Open in IMG/M
3300018066\|Ga0184617_1060266	Not Available	988	Open in IMG/M
3300018072\|Ga0184635_10110510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1090	Open in IMG/M
3300018482\|Ga0066669_10660804	Not Available	920	Open in IMG/M
3300019361\|Ga0173482_10041541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1450	Open in IMG/M
3300025899\|Ga0207642_10193022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1119	Open in IMG/M
3300025900\|Ga0207710_10469774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300025931\|Ga0207644_11019960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	695	Open in IMG/M
3300025935\|Ga0207709_10608000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	866	Open in IMG/M
3300025945\|Ga0207679_11385050	Not Available	645	Open in IMG/M
3300025981\|Ga0207640_10862253	Not Available	789	Open in IMG/M
3300026023\|Ga0207677_11488356	Not Available	625	Open in IMG/M
3300026078\|Ga0207702_11683236	Not Available	627	Open in IMG/M
3300026078\|Ga0207702_11898699	Not Available	587	Open in IMG/M
3300026088\|Ga0207641_10711404	Not Available	990	Open in IMG/M
3300027775\|Ga0209177_10064437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1077	Open in IMG/M
3300028596\|Ga0247821_10632997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	693	Open in IMG/M
3300028711\|Ga0307293_10056520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300028714\|Ga0307309_10226333	Not Available	501	Open in IMG/M
3300028718\|Ga0307307_10018084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1934	Open in IMG/M
3300028719\|Ga0307301_10312859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	515	Open in IMG/M
3300028720\|Ga0307317_10272792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	571	Open in IMG/M
3300028768\|Ga0307280_10033868	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300028768\|Ga0307280_10395280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	515	Open in IMG/M
3300028771\|Ga0307320_10059290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1421	Open in IMG/M
3300028778\|Ga0307288_10058683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1339	Open in IMG/M
3300028782\|Ga0307306_10146351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	655	Open in IMG/M
3300028784\|Ga0307282_10208850	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300028793\|Ga0307299_10197604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	756	Open in IMG/M
3300028796\|Ga0307287_10112476	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300028796\|Ga0307287_10240144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	686	Open in IMG/M
3300028811\|Ga0307292_10508700	Not Available	517	Open in IMG/M
3300028819\|Ga0307296_10113319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1456	Open in IMG/M
3300028819\|Ga0307296_10333194	Not Available	828	Open in IMG/M
3300028824\|Ga0307310_10615200	Not Available	554	Open in IMG/M
3300028824\|Ga0307310_10703004	Not Available	519	Open in IMG/M
3300028828\|Ga0307312_10314647	Not Available	1021	Open in IMG/M
3300028875\|Ga0307289_10404321	Not Available	562	Open in IMG/M
3300028876\|Ga0307286_10293515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	600	Open in IMG/M
3300028878\|Ga0307278_10214404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300028881\|Ga0307277_10313629	Not Available	697	Open in IMG/M
3300028884\|Ga0307308_10108483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1323	Open in IMG/M
3300028885\|Ga0307304_10474770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	571	Open in IMG/M
3300031152\|Ga0307501_10195476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	576	Open in IMG/M
3300031164\|Ga0307502_10000267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13884	Open in IMG/M
3300031547\|Ga0310887_10368339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300031847\|Ga0310907_10530613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	633	Open in IMG/M
3300031996\|Ga0308176_11432829	Not Available	735	Open in IMG/M
3300032074\|Ga0308173_10418605	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300034384\|Ga0372946_0031279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2363	Open in IMG/M
3300034384\|Ga0372946_0556947	Not Available	556	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.59%
Host-Associated	Host-Associated	29.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.71%
Plants	Host-Associated → Plants	29.41%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.78%
Sediment	Environmental → Aquatic → Sediment	5.88%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.88%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	33.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1144682122	3300000956	Soil	MLVCETCGSRWDEHAGPATTFATADCPLCGGELLELDYAPLDDSEPVHADVAHTLREHLLGVGA*
C688J18823_100183307	3300001686	Soil	MLVCATCGSRWDEDARLAATLPAALCPMCEGVLVELGEAPLDDGEPIHADVARVLREHLLGVGA*
C688J35102_1196322771	3300002568	Soil	SRWDEDARLAATLPAALCPMCEGVLVELGEAPLDDGEPIHADVARVLREHLLGVGA*
Ga0062593_1002331922	3300004114	Soil	MLVCATCGSRWDEDARLATMLPAAVCPICEGALVELDEAPLGDGEPVHADVARVLREHLLGVGA*
Ga0062595_1020093321	3300004479	Soil	MLVCATCGSRWDEDARLATMLPAAVCPICEGALVELDEAPLDDGEPVHADVARVLREHLLGVGA*
Ga0062591_1027829472	3300004643	Soil	MLVCATCGSRWDEDARLATTLPASFCPMCEGALVELGEAPLDDREPVHAGVARVLRAHLLGVGA*
Ga0068868_1012407091	3300005338	Miscanthus Rhizosphere	MLVCATCGSRWDEEARPAATFPTAVCPLCEGALVDLGGVALDDAEPVHADVASLLREHLLGVGA*
Ga0070661_1005401471	3300005344	Corn Rhizosphere	WDEDARPATTLPAAVCPLCDGALVDLDDVPLHDAEPVHANVASVLREHLLGVGA*
Ga0070659_1009709702	3300005366	Corn Rhizosphere	MLVCATCGSRWDEDARLATMLPAAVCPICEGALVELDEAPLDDGEPVHADVARVLREHLLGVGA
Ga0070663_1008885212	3300005455	Corn Rhizosphere	MLVCATCGSRWDEDARPATTLPAAICPLCDGALVDLDEVPLDDAEPVHANVASVLREHLLGVGA*
Ga0068853_1020702242	3300005539	Corn Rhizosphere	MLVCATCGSRWDEDARPATTLPAAICPLCDGALVDLDDVPLHDAEPVHANVASVLREHLLGVGA*
Ga0070696_1004926382	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLVCATCGSRWDEDARLATTLPAAVCPMCEGALVEVDAAPLDDGEPVHADVARVLREHLLGVGA*
Ga0070664_1020337561	3300005564	Corn Rhizosphere	MLVCATCGSRWDEEARPAATFPAAVCPLCDGALVDLDGVALDDAEPVHADVASLLREHLLGVGA*
Ga0068854_1014782132	3300005578	Corn Rhizosphere	MLVCATCGSRWDEDARPATTLPAAVCPICEGALVEVDAAPLDDGEPVHADVARVLRAHLLGVGA*
Ga0068856_1000910562	3300005614	Corn Rhizosphere	MLVCATCGSRWDEDARPATTLPAAICPLCDGALVDLDDVPLDDAEPVHANVASVLREHLLGVGA*
Ga0068856_1006962652	3300005614	Corn Rhizosphere	MLVCATCGSRWDEDARPATTLPVAVCPICEGALVEVDAAPLDDGEPVHADVARVLREHLLGVGA*
Ga0070702_1008839192	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLVCATCGSRWDEDARPAVTFPAAVCPLCDGALVDFDGAALDDAEPVHADVASLLREHLLGVGA*
Ga0068863_1022715142	3300005841	Switchgrass Rhizosphere	MLVCATCGSRWDEDARPATTLPAAVCPLCDGALVDLDDVPLHDAEPVHANVASVLREHLLGVGA*
Ga0070712_1005935792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLVCATCGSRWDEDARLATMLPAAVCPICEGALVEVDAAPLDDGEPVHADVARVLRAHLLGVGA*
Ga0068871_1017488722	3300006358	Miscanthus Rhizosphere	MLVCATCGSRWDEDAPPAVTFLAAVCPLCEGALVDLDGAPLYDAEPVHSDVASVLCEHLLGVGA*
Ga0079221_108868102	3300006804	Agricultural Soil	MLVCATCGSRWDEDARLATTLPAARCPMCEGDLVEPDDAPHHDCEPIHADVARVLRAHLLGVGA*
Ga0079219_102269262	3300006954	Agricultural Soil	MLVCATCGSRWDEDARLATTLPAARCPMCEGDLVEPDDAPPHDREPVHADVARVLRAHLLGVGA*
Ga0075423_132102542	3300009162	Populus Rhizosphere	MLVCATCGSRWDEDARPATTLPAAVCPICEGALVEVDAAPLDDGEPVHADVARVLREHLLGVGA*
Ga0134109_101679111	3300010320	Grasslands Soil	MLVCATCGSRWDEGARPTTTLPPAVCPLCEGSLVELDDVALDEPEHVHGDVARVLCEHLLGVGA*
Ga0134065_105012872	3300010326	Grasslands Soil	MLVCATCGSRWDEGARPTTTLPPAVCPLCEGALVELDDVALDEPEHVHGDVARVLCEHLLGVGA*
Ga0134126_118639932	3300010396	Terrestrial Soil	MLVCATCGSRWDEDARLATMLPAAVCPICEGALVEVDAAPLDDGEPVHADVARVLREHLLGVGA*
Ga0134127_117758962	3300010399	Terrestrial Soil	MLVCATCGSRWDEDARLATMLPAAVCPICEGALVALDSAPLDDGEPVHADVARVLREHLLGVGA*
Ga0134122_109170493	3300010400	Terrestrial Soil	MLVCATCGSRWEEDARLATMLPAAVCPICEGALVEVDAAPFDDGEPVHADVARVLREHLLGVGA*
Ga0137365_104023812	3300012201	Vadose Zone Soil	MLVCTTCGSRWDEQAGPATTFAAAECPLCGSALLELDGPPLDDSEPVHADVARVLREHLLGVGA*
Ga0137374_102667123	3300012204	Vadose Zone Soil	MLICATCGGRWDEDARPTTTLPAAVCPLCEGALVELDDAPLDAPEPVHADVARVLCAHLLGVGA*
Ga0137374_110722121	3300012204	Vadose Zone Soil	MLICATCGSRWDERTGPALTFEAADCPLCGGALLELDGVPLDDSEPVHGDVARVLRGHLLGV
Ga0137370_109279052	3300012285	Vadose Zone Soil	MLVCATCGSRWDEHARPAAAFVRADCPLCGGALVELEGSALDASEPVHGDVAQVLREHLLGVGA*
Ga0137372_101618832	3300012350	Vadose Zone Soil	MLMCATCASRWDEHVRPAAAFVRADCPLCGGTLVELEGPALDDSEPVHGDVAQVLREHLLGVGA*
Ga0137367_110886782	3300012353	Vadose Zone Soil	MLICATCGSRWDERTGPALTFEAADCPLCGGALLELDGVPLDDSEPVHGDVARVLRGHLLGVGA*
Ga0137371_108903412	3300012356	Vadose Zone Soil	MLVCTTCGSRWDEQAGPATTFVAAECPLCGSALLELDGPPLDDSEPVHADVARVLREHLLGVGA*
Ga0157306_103665072	3300012912	Soil	WDEDARLATMLPAAVCPICEGALVELDEAPLGDGEPVHADVARVLREHLLGVGA*
Ga0164306_105627632	3300012988	Soil	MLVCATCGSRWEEDARLATMLPAAVCPICEGALVALDAAPLDDGEPVHADVARVLREHLLGVGA*
Ga0164305_119081872	3300012989	Soil	MLVCATCGSRWDEGARLATMLPASVCPMCESALVELDEAPPDHREPVHADVARVLRAHLLGVGA*
Ga0157378_124871211	3300013297	Miscanthus Rhizosphere	MLVCATCGSRWEEDARLATMLPAAVCPMCEGALGALDAAPLDDGEPVHADVARVLREHLLGVGA*
Ga0157372_115322102	3300013307	Corn Rhizosphere	MLVCATCGSRWDEDARPATTLPAAICPLCEGALVDLDDVPLYDAEPVHADVASVLREHLLGVGA*
Ga0173483_105354321	3300015077	Soil	MLVCATCGSRWDEDARLATMLPAAVCPICEGALVELDEAPLGDGEPVHADVARVLRAHLLGVGA*
Ga0132258_113809452	3300015371	Arabidopsis Rhizosphere	MLVCATCGGRWGDVARPATTLPAGVCPLCEGALEVLDAAPAGGPEPVHADVARVLRAHLLGVGA*
Ga0132258_119405322	3300015371	Arabidopsis Rhizosphere	MLVCATCGSRWDEGALLATALPDAVCPMCESALVELDEAPLDHGEPVHAGVARVLRAHLLGVGA*
Ga0132258_127668962	3300015371	Arabidopsis Rhizosphere	MLVCATCGSRWDEDARLATTLPAAVCPMCEGALVKLDDARLDRGEPVHADVARVLRAQLLGVGA*
Ga0132258_133288612	3300015371	Arabidopsis Rhizosphere	MLVCATCGSRWDEDARLATTRPASCCPLCEGAFVELVEAPLDHGEPVHADVARVLRAHLLGVGA*
Ga0132257_1002535602	3300015373	Arabidopsis Rhizosphere	MLVCATCGSRWDEDARPATTLPSAVCPMCEGALVAVDEAQFDCPEPVHADVARTLRAHLLGVGA*
Ga0132255_1054882292	3300015374	Arabidopsis Rhizosphere	MLVCATCGSRWDEDARLATTLPAAVCPMCEGALVKLDDARLDRGEPVHADVARVLRAQLLGV
Ga0190266_104638741	3300017965	Soil	MLVCATCGSRWDEDARLATTLPAALCPMCEGALVELGDAPRDDGEPVHADVARVLREHLLGVGA
Ga0184608_100819842	3300018028	Groundwater Sediment	MLVCAICGSRWDEDARPTTTFPPAVCPLCEGSLVALDEALLDDGEPVHGDAARVLCSHLLGVGA
Ga0184620_101325043	3300018051	Groundwater Sediment	MLICATCGSRWDEDARLTTMLPAAVCPMCEGALVELDDAPLDDGEPVHADVARQLREQLLGVGA
Ga0184620_102693742	3300018051	Groundwater Sediment	SPAMLICATCGSRWDEDARLTTLLPAALCPMCEGVLVELGEAPLDDGEPIHADVARVLREHLLGVGA
Ga0184619_104538792	3300018061	Groundwater Sediment	MLVCATCGSRWDEDARPTTTFPPAVCPLCEGSLVALDDALLDDGEPVHGDVARVLRSHLLGVGA
Ga0184617_10602662	3300018066	Groundwater Sediment	MLICATCGSRWDEDARLTTMLPAAMCPMCEGALVELDDAPLDDGEPVHADVARQLREQLLGVGA
Ga0184635_101105102	3300018072	Groundwater Sediment	MLVCATCGSRWDEDARPTTTLPAAVCPLCEGVLVGLDEAPRDDTEPVHADVARVLCNHLLGVGA
Ga0066669_106608042	3300018482	Grasslands Soil	VCATCGSRWDEGARPTTTLPPAVCPLCEGSLVELDDVALDEPEHVHGDVARVLCEHLLGVGA
Ga0173482_100415412	3300019361	Soil	MLVCATCGSRWDEDARLATMLPAAVCPICEGALVELDEAPLGDGEPVHADVARVLREHLLGVGA
Ga0207642_101930222	3300025899	Miscanthus Rhizosphere	MLVCATCGSRWEEDARLATMLPAAVCPICEGALVELDEAPLDDGEPVHADVARVLREHLLGVGA
Ga0207710_104697742	3300025900	Switchgrass Rhizosphere	MLVCATCGSRWDEDARPATTLPAAVCPLCDGALVDLDDVPLHDAEPVHANVASVLREHLLGVGA
Ga0207644_110199602	3300025931	Switchgrass Rhizosphere	MLVCATCGSRWDENERPATTLPVAVCPICEGALVEVDAAPLDDGEPVHADVARVLREHLLGVGA
Ga0207709_106080002	3300025935	Miscanthus Rhizosphere	MLVCATCGSRWDEDARPATTLPAAVCPICEGALVEVDAAPLDDGEPVHADVARVLREHLLGVGA
Ga0207679_113850502	3300025945	Corn Rhizosphere	MLVCATCGSRWDEEARPAATFPTAVCPLCEGALVDLGGVALDDAEPVHADVASLLREHLLGVGA
Ga0207640_108622531	3300025981	Corn Rhizosphere	MLVCATCGSRWDEDARPATTLPAAVCPLCDGALVDLDDVPLHDAEPVHADVASVLREHLLGVGA
Ga0207677_114883561	3300026023	Miscanthus Rhizosphere	RSAALGSARMLVCATCGSRWDEDARPATTLPAAVCPLCDGALVDLDDVPLHDAEPVHANVASVLREHLLGVGA
Ga0207702_116832361	3300026078	Corn Rhizosphere	GRLGVDGASRSAALGSARMLVCATCGSRWDEDARPATTLPAAVCPLCDGALVDLDDVPLHDAEPVHANVASVLREHLLGVGA
Ga0207702_118986991	3300026078	Corn Rhizosphere	MLVCATCGSRWDEDARPATTLPAAVCPICEGTLVALDEAPLDDGEPVHADVARVLREHLLGVGA
Ga0207641_107114041	3300026088	Switchgrass Rhizosphere	DGAPGPPALGSAPMLVCATCGSRWDEDAPPAVTFLAAVCPLCEGALVDLDGAPLSDAEPVHADVASVLREHLLGVGA
Ga0209177_100644371	3300027775	Agricultural Soil	MLVCATCGSRWDEDARLATTLPAARCPMCEGDLVEPDDAPPHDREPVHADVARVLRAHLLGVGA
Ga0247821_106329972	3300028596	Soil	MLVCATCGSRWDGDACPATTLPSAACPMCEGALVALDEPPFDGPEPVHADVA
Ga0307293_100565202	3300028711	Soil	MLVCATCGSRWDEDARPAVTFPVAACPLCEGALVELDDAPLDDTEPVHADVARVLCEHLLGVGA
Ga0307309_102263331	3300028714	Soil	GAARRVPLGSAPMLVCATCGSRWDEDARLATTLPAALCPMCEGVLVELGEAPLDDGEREPIHADVARVLREHLLGVGA
Ga0307307_100180843	3300028718	Soil	MLVCATCGSRWDEDARLATMLPVAVCPMCEGALVDLDEAPLDDGEQVHTDVARVLREHLLGVGA
Ga0307301_103128591	3300028719	Soil	MLVCATCGSRWDEDARPTTTLPAAVCPLCEGVLVELDDAPRDDTEPVHADVARVLRDHLLGVGA
Ga0307317_102727922	3300028720	Soil	MLVCATCGSRWNEDARLATTLPAALCPMCEGVLVELDEAPLGDGEPVHADVARVLREHLLGVGA
Ga0307280_100338682	3300028768	Soil	MLVCATCGSRWDEDARLATKLPAALCPMCEGVLVELGEAPLDDGEREPIHADVARVLREHLLGVGA
Ga0307280_103952802	3300028768	Soil	MLVCATCGSRWDEDARAATTFPPAVCPLCEGSLVGLDDAPLDDGEPVHADVARVLCSHLLGVGA
Ga0307320_100592902	3300028771	Soil	MLVCATCGSRWDEDARPAVTFPVAACPLCEGALVELDDAPLDDAEPVHGDVARVLCEHLLGVGA
Ga0307288_100586832	3300028778	Soil	MLVCATCGSRWDEDARLATTLPAALCPMCEGVLVELGEAPLDDGEREPIHADVARVLREHLLGVGA
Ga0307306_101463512	3300028782	Soil	MLVCATCGSRWDEDARLAATLPAALCPMCEGVLVELGEAPLDDGEPIHADVARVLREHLLGVGA
Ga0307282_102088502	3300028784	Soil	MLVCATCGSRWDEDARLATTLPAALCPMCEGVLVELGEAPLDEGEREPIHADVARVLREHLLGVGA
Ga0307299_101976041	3300028793	Soil	MLICATCGSRWDEDARLTTMLPAAVCPMCEGTLVELDDAPLDDGEPVHADVARQLREQLLGVGA
Ga0307287_101124762	3300028796	Soil	MLICATCGSRWDEDARLTTMLPAAVCPMCEGALVELDDAPLDDGEPVHADLARQLREQLLGVGA
Ga0307287_102401442	3300028796	Soil	MLVCATCGSRWDEDARPTTTLPAAVCPLCEGVLVELDDAPHDDTEPVHADVARVLRDHL
Ga0307292_105087001	3300028811	Soil	DGAARCPALGSAPMLVCATCGSRWDEDARLATMLPVAVCPMCEGALVDLDEAPLDDGEQVHTDVARVLREHLLGVGA
Ga0307296_101133192	3300028819	Soil	MLVCATCGSRWDEDARPATSLPPTVCPLCEGALVDLDNAPLDDTEPVHADVARMLREHLLGVGA
Ga0307296_103331942	3300028819	Soil	RWDEDARLTTMLPAAVCPMCEGALVELDDAPLDDGEPVHADVARQLREQLLGVGA
Ga0307310_106152002	3300028824	Soil	RRVPLGSAPMLVCATCGSRWDEDARLATTLPAALCPMCEGVLVELGEAPLDEGEREPIHADVARVLREHLLGVGA
Ga0307310_107030042	3300028824	Soil	RMLVCATCGSRWDEDARPAVTFPVAACPLCEGALVELDDAPLDDTEPVHADVARVLCEHLLGVGA
Ga0307312_103146471	3300028828	Soil	MLICATCGSRWDEDARPATTFGAAVCPLCEGALVELDDAQLADAEPVHADVARVLCEHLLGVGA
Ga0307289_104043211	3300028875	Soil	ARMLVCATCGSRWDEDARPTTTFPPAVCPLCEGSLVALDEALLDDGEPVHGDAARVLCSHLLGVGA
Ga0307286_102935152	3300028876	Soil	MLVCATCGSRWDEDARPAVTFPAAACPLCEGALVELGDAPLDNGEPVHADVARSLCEHLLGVGA
Ga0307278_102144041	3300028878	Soil	MLICATCGSRWDEDARLTTMLSAAVCPMCEGALVELDDAPLDDGEPVHADVARQLREQLLGVG
Ga0307277_103136291	3300028881	Soil	GGQGCLVVDVDGAGASTAVGSARMLVCATCGSRWDEDARPTTTFPPAVCPLCEGSLVALDDALLDDGEPVHGDVARVLRSHLLGVGA
Ga0307308_101084832	3300028884	Soil	MLVCATCGSRWDEGARLATMLPVAVCPMCEGALVDLDEAPLDDGEQVHTDVARVLREHLLGVGA
Ga0307304_104747701	3300028885	Soil	MLVCATCGSRWDEDARLATTLPAALCPMCEGVLVELGDAPLDDGEPVHADVARVLREHLLGVGA
Ga0307501_101954761	3300031152	Soil	MLVCATCGSRWDEDARLATTLPAALCPMCEGVLVELGEAPLDDGEPIHADVARVLREHLLGVGA
Ga0307502_100002676	3300031164	Soil	MLVCATCGSRWDEDARPATTFPAAVCPLCEGALVDLDDAALDDAEPVHADVARVLRQHLLGVGA
Ga0310887_103683391	3300031547	Soil	MLVCATCGSRWDEGARLATMLPAAVCPMCESALVELDEAPADHREPVHADVARV
Ga0310907_105306131	3300031847	Soil	MLVCATCGSRWDEGALLATALPDAVCPMCEGALVELDEAPLDHREPVHAGVARVLRAHLLGVGA
Ga0308176_114328292	3300031996	Soil	MLACATCGSRWDEDARLATTLPAALCPMCEGVLAELGEAPLSGGEPVHAGVARVLREHLLGVGA
Ga0308173_104186052	3300032074	Soil	MLVCATCGSRWDEDARLATTLPAALCPMCEGVLVEPGEAPLDDGESVPIHADVARVLREHLLGVGA
Ga0372946_0031279_1473_1667	3300034384	Soil	MLVCVTCGSRWDEDARPATTFPVTGCPLCEGALVDLAGAQLDDAEPVHGDVARVLCQHLLGVGA
Ga0372946_0556947_79_273	3300034384	Soil	MLVCATCGSRWDEDARLATTLPAALCPMCEGALVELDAAPLGDGEPVHADVARVLREHLLGVGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101639

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences