Metagenome / Metatranscriptome Family F101644

Basic Information
Family ID	F101644
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	82 residues
Representative Sequence	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMKLDAVERLAQKR
Number of Associated Samples	93
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	16.67 %
% of genes from short scaffolds (< 2000 bps)	14.71 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (99.020 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (34.314 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.824 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.40% β-sheet: 0.00% Coil/Unstructured: 68.60%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01565	FAD_binding_4	5.88
PF13302	Acetyltransf_3	2.94
PF12862	ANAPC5	1.96
PF00211	Guanylate_cyc	1.96
PF09339	HTH_IclR	0.98
PF06325	PrmA	0.98
PF04545	Sigma70_r4	0.98
PF13271	DUF4062	0.98
PF08751	TrwC	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.96
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.98
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.98
COG3897	Protein N-terminal and lysine N-methylase, NNT1/EFM7 family	Posttranslational modification, protein turnover, chaperones [O]	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
All Organisms	root	All Organisms	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
cellular organisms	root	All Organisms → cellular organisms	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005435\|Ga0070714_100413181	Not Available	1277	Open in IMG/M
3300005437\|Ga0070710_11280628	Not Available	544	Open in IMG/M
3300005439\|Ga0070711_101707947	Not Available	551	Open in IMG/M
3300006572\|Ga0074051_11711187	Not Available	912	Open in IMG/M
3300006574\|Ga0074056_11865820	Not Available	732	Open in IMG/M
3300012199\|Ga0137383_10484319	Not Available	906	Open in IMG/M
3300012209\|Ga0137379_10441978	Not Available	1209	Open in IMG/M
3300012211\|Ga0137377_10928181	Not Available	802	Open in IMG/M
3300012930\|Ga0137407_10053371	Not Available	3295	Open in IMG/M
3300013105\|Ga0157369_10599333	Not Available	1137	Open in IMG/M
3300021432\|Ga0210384_10399260	Not Available	1238	Open in IMG/M
3300025898\|Ga0207692_10034286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2456	Open in IMG/M
3300025910\|Ga0207684_10549436	Not Available	988	Open in IMG/M
3300025913\|Ga0207695_10442032	Not Available	1184	Open in IMG/M
3300025916\|Ga0207663_10208933	Not Available	1413	Open in IMG/M
3300025929\|Ga0207664_11280448	Not Available	652	Open in IMG/M
3300025949\|Ga0207667_11672288	Not Available	604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.53%
Host-Associated	Host-Associated	26.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.55%
Plants	Host-Associated → Plants	26.47%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.78%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.10%
Loam	Environmental → Terrestrial → Soil → Loam	24.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_03130550	2199352025	Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLHGWMGEEEPPDEARPQVEPVSEAERLRLAGMKLDAVERLAQKRYRMRE
2222019765	2209111022	Grass Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMKLDAVERLAQKGCRMRG
2222028137	2209111022	Grass Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVPEAEHGSGWPA
JGI24740J21852_101576632	3300001979	Corn Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVERLAQKRVSNARLALGAVV
Ga0066680_106324271	3300005174	Soil	MSQKDDAGTEREQVPPSAVDRQLDDHHGPGETPYDAESGLERLRGWMGDEEPPDDARPQVEPVPEAEQRLRLAGMKL
Ga0070690_1005674763	3300005330	Switchgrass Rhizosphere	MSQKDDAGTERGQVPPSAVYRQLDDHLGPEEAPNDAESGLQQLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVERLAQKR
Ga0066388_1068007571	3300005332	Tropical Forest Soil	MSQKDDAGTEREQVPPSAVHRQLGDHLGPEEAPYDADSGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMKLDAVER
Ga0070671_1001848132	3300005355	Switchgrass Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEGRPQVEPVSQAERLRLAGMRLDAVERLAQKRV
Ga0070709_101261122	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARPQVEPVSQAE
Ga0070714_1004131813	3300005435	Agricultural Soil	MNQEDDPGTEREQVPPSAVHRQLDDHLGPEEAPYDAEGGLQRLRGWMSEGEPPDEARPQVEPVSETERLRLAGMKLDAVERLAQKRISNARIALGAVVLVSVLAGLGLLFR
Ga0070713_1000458091	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLA
Ga0070710_112806282	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNQEDDPGTEREQVPPSAVHRQLDDHLGPEEAPYDAEGGLQRLRGWMSEGESPDEARPQVEPVSETERLRLAGMKLDAVERLAQKRISNARIALGAVVLVSVLAGLGLLFR
Ga0070711_1005623161	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVERLAQKRVS
Ga0070711_1017079472	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTERGQVPPSAVYRQLGDHLGPEEAPYEAESGLQRLRGWMGEEEPPDEARPQVEPVSQAE
Ga0070707_1010670551	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEREQVPPSAVYRQPDDHLGPEEAPYNAESGLQRLRGWMGDEEPPDEARPQVEPVSQTERLRLAGMKLDAVER
Ga0070699_1010650681	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVERLAQKRVSNARLALG
Ga0070697_1018149981	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQ
Ga0070696_1008067433	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVERLAQK
Ga0070704_1008551922	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQTERLRLAGMKLDAVER
Ga0066692_106003922	3300005555	Soil	MSQKDDAGTEREQVPPSAVDRQLDDHHGPGETPYDAESGLERLRGWMGDEEPPDDARPQVEPVPEAEQRLRLAGMKLDAVERLAQKRISNARIALGAV
Ga0070762_108906971	3300005602	Soil	MSQKDDAGTEREQVPSSAVYRQLDDHLGPGEAPYDAESGLQRLRGWMGEEEPPDEARPQVELMPETERLSLAGMKLDAVERLAQKRISNARIAVGAVVLVSVLAG
Ga0068856_1000677233	3300005614	Corn Rhizosphere	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARAKVEPVSQAERLRLAGMKLDAVERLAQKRVSNARLA
Ga0068859_1012754133	3300005617	Switchgrass Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDETRPQVEPVSQAERLRLAGMRLDAVE
Ga0068864_1007407783	3300005618	Switchgrass Rhizosphere	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARPQVEPVS
Ga0068861_1027035322	3300005719	Switchgrass Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMKLDAVERLAQKR
Ga0068851_104292871	3300005834	Corn Rhizosphere	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVE
Ga0070717_101533821	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLHGWMGEEEPPDEARAQVEPVSQAERLRLASMKLDA
Ga0066652_1013365711	3300006046	Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLQPGEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSETERLRLAGMKLDAVERLAQKRVSNA
Ga0070712_1003098642	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTERGQVPPSAVYRQLDDQLGPEETPYEAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGLKLDAVERLAQKRISNARLAIGAVVLVS
Ga0068871_1008817082	3300006358	Miscanthus Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVERLAQKRVSNARLALGAVVLVSVLAGLGLL
Ga0074051_117111874	3300006572	Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPPVEPVSGTERLRLAGMKLDAAER
Ga0074056_118658201	3300006574	Soil	MSQTDDAGTEREQVPPSAVYQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDQARPQAEPVSQAERLRLAGMKLDAVERLAQKRVSNARIALGAVVL
Ga0079220_120311521	3300006806	Agricultural Soil	MSQKDDAGTEREQVPQSAVYRQLDDHLGPEEAPYDAESGLQRLHGWMGEEEPPDEARPQVEPVSETERLSLAGMKLDAVERLAQKRISNA
Ga0075434_1003426722	3300006871	Populus Rhizosphere	MSQKDDAGTEREQVQPSAVHRQLGDHLGPEEAPYDADSGLQRLRGWMGEEEPDEARPPMEPVSQAERLRLAGMKLDAVERLAQKRVSNAR
Ga0075434_1007302763	3300006871	Populus Rhizosphere	MSQKDDAGTERGQVPSSAVYRQLDDHLGPEEAPYDAESGLQRLHGWMGEEEPPDEARPPMEPVSQ
Ga0075426_101325304	3300006903	Populus Rhizosphere	MSQKDDAGTEREQVPPSGVYRQLGDHLGPGEAPYEAESGLQRLHGWMGEEEPPDEARPQ
Ga0075424_1021248632	3300006904	Populus Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQ
Ga0075436_1006153461	3300006914	Populus Rhizosphere	MGQKDDAGTEREQVPPSAVYRQLDEHVGPGETPYDAESGLERLRGWMGEEEPQDEARPEPVPETERLRLAGMKLDAVERLAEKRISNARIALGAVVLVSVLAGLGLL
Ga0105250_101803541	3300009092	Switchgrass Rhizosphere	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARAQVEPVSQAERLRLASMKLDAVER
Ga0105237_127245201	3300009545	Corn Rhizosphere	MSQKDDAGTEREQVPPSAVHRQLDDHLGPGETSYDADAESGLGRLRGWMGDEEPPDEAPQVEPVPETERLRLAGMKLDAVERLAQKRI
Ga0105249_102273723	3300009553	Switchgrass Rhizosphere	MSQKDDAGTERDQVPQSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGAEEPQDEARPPVEPVSETERLKLASMKLDAAERMAQKRISNARLAL
Ga0126373_100372405	3300010048	Tropical Forest Soil	MSQNDDAGPEREQVSPSAVYHQLDDQLGPEEAPYDAESGLQRLRGWMEEEAPPDGARPHVEPVPEAEQRLRLAGMKLDAVERLAQKRVS
Ga0099796_104484701	3300010159	Vadose Zone Soil	MSPKDDAGTEREQVPPSAVYRQLDDHLGPGEAPYDAESGLQRLRGWMGEEEPPDEARPRVEPVPETERLR
Ga0134080_100739161	3300010333	Grasslands Soil	MTRTGTLLAGGGTMSQKDDAGTEREQVPPSAVYRQLDDHLQPGEAPYDAESGLQRLRGWMGEEEPPDDARPQVEPVPEAEQRLRLAGMKLHAVERLAQKRISNARIALGAV
Ga0134128_129498591	3300010373	Terrestrial Soil	MSQKDDAGTEREQVPPSAVFRQLDDHLGPEEAPYDAESGLQRLRGWMGEEELPDEARPQVEPVSETERLRLA
Ga0105239_116349491	3300010375	Corn Rhizosphere	MSQKDDAGTERGQVPPSAVYRQLDDHLGPEEAPNDAESGLQQLRGWMGEEEPPDEARPQAEPVSQAERLRLAGMKLDAVERL
Ga0134124_113140741	3300010397	Terrestrial Soil	MSQKDDAGTERDQVPQSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPPVEPVSETERLRLASMKLDAAE
Ga0126383_111977372	3300010398	Tropical Forest Soil	MSQHDDAGTEREQVSPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGDEAPPDEPRPHVEPLPEAEQRLRLAAMKL
Ga0137383_104843191	3300012199	Vadose Zone Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPMSE
Ga0137365_110869061	3300012201	Vadose Zone Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLRPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQTERLRLAGMKLDA
Ga0137379_104419782	3300012209	Vadose Zone Soil	MSQKDDAGTEREQVPPSAVDRQLDDHHGPGETPYDAESGLERLRGWMGDEEPPDEARPQ
Ga0137377_109281811	3300012211	Vadose Zone Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQV
Ga0137371_105995371	3300012356	Vadose Zone Soil	MSQKDDAGTEREQVPPSAVDRQLDDHHGPGETPYDAESGLERLRGWMGDEEPPDEARPQAEPVPEAEQRLRLAGMKLDAVERLAQKRISNARIALGAV
Ga0157293_103475031	3300012898	Soil	MSQKDDAGTERGQVPPSAVHRQRDDHFGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMKLDAVERLAQKRVSNARIAVGAV*
Ga0137404_103465083	3300012929	Vadose Zone Soil	MSQKDDAGTEPEQVPPSAVYRQLDDHLGPGEAPYDAESGLQRLHGWMGDEEPPDEARPQVEPVPETERLRLAGM
Ga0137407_100533716	3300012930	Vadose Zone Soil	MSQKDDAGTEREQVPPSAVFRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQMEPVSETERRRLAGMKLDAVERLAQKRISNARL
Ga0126375_109836831	3300012948	Tropical Forest Soil	MSQHDDAGTEREQVSPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDGARPQVEPAPEAEQRLRLARMKLDAVERLAPKRISNARIA
Ga0164301_100216971	3300012960	Soil	MSQKDEAGTERGQVPPSAVHRQRDDHLAPGEAPYDAESGLQRLRGWMGEEEPPDEARLQVEPVSQAER
Ga0164302_100061621	3300012961	Soil	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVERLAQKRVSNARLALGAV
Ga0157369_105993332	3300013105	Corn Rhizosphere	MSQKDDAGTEREQVQPSTVHRQLGDHLGPEEAPYDADSGLQRLRGWMGEEEPPDEARPPVEPVSETERLRLAGMKL
Ga0132256_1015451032	3300015372	Arabidopsis Rhizosphere	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYEAESGLQRLRGWMGEEEPPDEARPQVEPVPETERLRLAGMKLDAVERLAQKRV
Ga0132257_1012979322	3300015373	Arabidopsis Rhizosphere	MSQKDDAGTERGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARPQV
Ga0132255_1055641311	3300015374	Arabidopsis Rhizosphere	MSQNDDTGPEREQVSPSAVYRQLGDRLGPEEAPYDAESGLQRLRGWMEEEAPPDGARPHVEPVPEAEQRLRLAGMKLDAVERLAQKRISNA
Ga0187823_103493271	3300017993	Freshwater Sediment	MSQDDAGTEREQAPPSAVYGQLGDHLGPGGASYDAESGLQRLSDWMGDEEPPDEARPHVEPVPEAEQRLRLAGLKLDAVERLA
Ga0206354_105187181	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARAQVEPVSQAERLRLAGMKLDAVERLAQKRVSNARLA
Ga0210384_103992601	3300021432	Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSETERLRLAGMKLDAVERLAQKRVSNARI
Ga0210392_111991641	3300021475	Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPGETPYDAESGLERLRGWMGDEEPPDEARPEPVPET
Ga0210402_102113595	3300021478	Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGDEEPPDGARPQV
Ga0210402_118929591	3300021478	Soil	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEQPPDEARPQVEPVSETERLRLAGMKLDAVERLAQKRISNARIA
Ga0247677_10752711	3300024245	Soil	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEGRPQ
Ga0179589_102186951	3300024288	Vadose Zone Soil	MSQKDDAGTEREQVPPSADFRQLDDQLGSGEAPYDAESGIQRLRGWMGEEEPPDEARPRVEPVSEAE
Ga0247668_10392492	3300024331	Soil	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDETRPQVEPGS
Ga0207692_100342863	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEREQVPPSAVHRQLDDHLGPGETSYDADAESGLGRLRGWMGDEEPPDEAPQVEPVPETERLRLAGMKLDAVERLAQKRISNARIA
Ga0207692_102190162	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTERGQVPPSAVYRQLDDQLGPEETPYEAESGLQRLRGWMGEEEPPDEARPQV
Ga0207692_105439161	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMSDEEPPDQARPQADPVPEAERLRLAGMKLDAVE
Ga0207642_107815011	3300025899	Miscanthus Rhizosphere	MSQKDDAGTEREQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVERLAQKRVSNARLALGAVVLVSV
Ga0207684_105494363	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEQEPPDEARPQAEPVSE
Ga0207695_104420322	3300025913	Corn Rhizosphere	MSQKDDAGTERDQVPQSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPPVEPVSE
Ga0207663_102089331	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGDEEPPDEARPQADPVPEAERLRLAGMKLDAVERLAQKRISNARIALGAVVLVSVL
Ga0207663_112683921	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKDDAGAEPEQVPPSAAYRQLGDHLGPGEAPYDAESGLQRLHGWMGEEEPPDEGRPQVEPVPETERLRLAGMKLDAVERLAQKRISNARIALGAVVLVSVLA
Ga0207659_113928312	3300025926	Miscanthus Rhizosphere	MSQKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQ
Ga0207664_105240342	3300025929	Agricultural Soil	MSQKDDAGTERGQVPPSAVYRQLDDQLGPEEAPYEAESGLQRLRGWMGEEEPPDEARPQVEPVS
Ga0207664_112804481	3300025929	Agricultural Soil	MNQEDDPGTEREQVPPSAVHRQLDDHLGPEEAPYDAEGGLQRLRGWMSEGEPPDEARPQVEPVSETERLRLAGMKLDAVERLAQKRISNARIALGAVVLVSVLAGLGLLFRL
Ga0207667_116221062	3300025949	Corn Rhizosphere	MSQKDDAGTERGQVPPSAVHRQRDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAVERL
Ga0207667_116722881	3300025949	Corn Rhizosphere	MSQKDDAGTEREQVPPSAVHRQLDDHLGPGETSYDADAESGLGQLRGWMGDEEPPDEAPQVEPAPETERLRLAGMKLDAVERLAQKRISNARIALGAVVLVSVLAGLGLL
Ga0207712_102386651	3300025961	Switchgrass Rhizosphere	MSQKDDAGTERDQVPQSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGAEEPQDEARPPVEPVSETERLKLASMKLDAAERMAQKRISNAR
Ga0179593_11296221	3300026555	Vadose Zone Soil	MSPKDDAGTEREQVPPSAVYRQLDDHLGPEEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSETERLRLAGMSWMRWSASR
Ga0209111_10577812	3300027058	Forest Soil	MSQKDDAGTERGQVPPSAVYRQLDDQLGPEEAPYEAESGLQRLRGWMGEEEPPDEARPRVEP
Ga0209073_100312121	3300027765	Agricultural Soil	MSQKDDAGTEREQVPPSAVYRQLGDHLGPEEAPYEAGSGLQRLHGWMGEEEPPDEARPQVEPVSQAERLRLAGMKLDAVERLAQKRVS
Ga0209177_101158922	3300027775	Agricultural Soil	MSQKDDAGTEREQVPPSAVYRQLGDHLGPEEAPYEAGSGLQRLHGWMGEEEPPDEARPQVEPVSQAERLRLAGMKLDAVERLAQKRVSNAR
Ga0209074_100412181	3300027787	Agricultural Soil	MSQKDDAGTEREQVPPSAVYRQLGDHLGPEEAPYEAGSGLQRLHGWMGEEEPPDEARPQVEPVSQAERLRLAGMKLDAVERLAQKRVSNARLAI
Ga0318546_110330512	3300031771	Soil	MSQNDDAGPEREQVSPSAVHHQLDDRLEREEAPYDAESGLQRLRGWMEEEAPPDGARPHAEPVPEAEQGLRLAGMKLDAVERLAQKRISNARVALGAVVLV
Ga0318529_101300381	3300031792	Soil	MSRNDDAGPEREQVSSSAVYHRPDDQLGPEEGPYDTESGLQRLRGWMREEAPPDGAR
Ga0318576_100714981	3300031796	Soil	MSRNDDAGPEREQVSSSAVYHRPDDQLGPEEGPYDTESGLQRLRGWMREEAPPDGARPHVEPVPEAEQQLRLTGMKL
Ga0318556_100524291	3300032043	Soil	MSRNDDAGPEREQVSSSAVYHRPDDQLGPEEGPYDTESGLQRLRGWMREEAPPDG
Ga0318518_104083532	3300032090	Soil	MSRNDDAGPEREQVSSSAVYHRPDDQLGPEEGPYDTESGLQRLRGWMREEAPPDGARPHVEPVPEAEQQLRLTGMKLDAVERLAQKRISNARVALGAVVLVS
Ga0307470_102619971	3300032174	Hardwood Forest Soil	MSQKDDAGTEQGQVPPPAVYRQLGDHLGPEEAPYEAEGGLQRLRGWMGEEEPPDEARAKVEPVSQAERLRLAGM
Ga0335085_104171273	3300032770	Soil	MSQDDDAGTEREQVPPSAVYRQADDHLGSGEAPYDAESGLQRLRGWMGEEEPPDEARPQVEPVSQTERLRLAGMKLDA
Ga0335072_112224621	3300032898	Soil	MSQKDDAGTEREQVPPAAVYRQFDDHLGPGEAPYDAEGGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGLKLDAVERLAQKRVS
Ga0335073_110136822	3300033134	Soil	MSQNDNAGPEREQVSPSAVHHQLDDQLGPEEAPYDAESGLQRLRGWMGEEAPPDGARPNVEPVPEAEQRLKLAGMKLDAVERLAQKRI
Ga0310810_100763253	3300033412	Soil	MSQKDDAGTEREQVQPSIVHRQLGDHLGPEEAPYDADSGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMKLDA
Ga0310811_106897331	3300033475	Soil	MSQKDDAGTEREQVPPSAVHRQLGDRLGPEEAPYDAEGGLQRLRGWMGEEEPPDEARPQVEPVSQAERLRLAGMRLDAV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101644

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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