Metagenome / Metatranscriptome Family F101692

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101692
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	46 residues
Representative Sequence	ATAIGLGGELLPKEALHFRQEDRIRELASRFLSLVRDARALRETYY
Number of Associated Samples	82
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	79.41 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.725 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (37.255 % of family members)
Environment Ontology (ENVO)	Unclassified (48.039 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.95% β-sheet: 2.70% Coil/Unstructured: 51.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13493	DUF4118	33.33
PF00486	Trans_reg_C	7.84
PF00072	Response_reg	1.96
PF00188	CAP	0.98
PF13620	CarboxypepD_reg	0.98
PF13635	DUF4143	0.98
PF07642	BBP2	0.98
PF12833	HTH_18	0.98
PF00355	Rieske	0.98
PF13517	FG-GAP_3	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.73 %
Unclassified	root	N/A	36.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.73 %
Unclassified	root	N/A	36.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.73 %
Unclassified	root	N/A	36.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	56.86 %
Unclassified	root	N/A	36.27 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	55.88 %
Unclassified	root	N/A	36.27 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	55.88 %
Unclassified	root	N/A	36.27 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	55.88 %
Unclassified	root	N/A	36.27 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.98 %

Name	Rank	Taxonomy	Distribution
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	45.10 %
Unclassified	root	N/A	36.27 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.98 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	41.18 %
Unclassified	root	N/A	36.27 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	3.92 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.98 %
Blastopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula	0.98 %

Name	Rank	Taxonomy	Distribution
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	41.18 %
Unclassified	root	N/A	36.27 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	3.92 %
Blastopirellula marina	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → Blastopirellula marina	0.98 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005591\|Ga0070761_11008681	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006086\|Ga0075019_10097027	Not Available	1691	Open in IMG/M
3300006174\|Ga0075014_100034673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	2064	Open in IMG/M
3300009638\|Ga0116113_1197921	Not Available	519	Open in IMG/M
3300009638\|Ga0116113_1213735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	502	Open in IMG/M
3300009644\|Ga0116121_1074605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1061	Open in IMG/M
3300009644\|Ga0116121_1313043	Not Available	507	Open in IMG/M
3300014151\|Ga0181539_1031465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	2732	Open in IMG/M
3300014160\|Ga0181517_10346893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	771	Open in IMG/M
3300014161\|Ga0181529_10120501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1638	Open in IMG/M
3300014167\|Ga0181528_10479602	Not Available	682	Open in IMG/M
3300014168\|Ga0181534_10000808	All Organisms → cellular organisms → Bacteria	21609	Open in IMG/M
3300014168\|Ga0181534_10020975	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	3304	Open in IMG/M
3300014168\|Ga0181534_10147599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1204	Open in IMG/M
3300014169\|Ga0181531_10027901	Not Available	3251	Open in IMG/M
3300014199\|Ga0181535_10103423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1832	Open in IMG/M
3300014199\|Ga0181535_10331516	Not Available	902	Open in IMG/M
3300014200\|Ga0181526_10954677	Not Available	539	Open in IMG/M
3300014491\|Ga0182014_10189925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1119	Open in IMG/M
3300014491\|Ga0182014_10205560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1060	Open in IMG/M
3300014492\|Ga0182013_10190104	Not Available	1247	Open in IMG/M
3300014492\|Ga0182013_10492425	Not Available	640	Open in IMG/M
3300014657\|Ga0181522_10280230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	988	Open in IMG/M
3300014838\|Ga0182030_10161300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2810	Open in IMG/M
3300014838\|Ga0182030_10166943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2741	Open in IMG/M
3300014839\|Ga0182027_11832693	Not Available	586	Open in IMG/M
3300017988\|Ga0181520_10322492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1148	Open in IMG/M
3300018043\|Ga0187887_10590311	Not Available	656	Open in IMG/M
3300021181\|Ga0210388_10600102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	963	Open in IMG/M
3300021433\|Ga0210391_10677711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	808	Open in IMG/M
3300021477\|Ga0210398_10160671	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300022872\|Ga0224526_1001074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10657	Open in IMG/M
3300023088\|Ga0224555_1018448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3513	Open in IMG/M
3300023090\|Ga0224558_1138553	Not Available	795	Open in IMG/M
3300023228\|Ga0224530_1040743	Not Available	521	Open in IMG/M
3300023247\|Ga0224529_1019063	Not Available	1527	Open in IMG/M
3300025473\|Ga0208190_1040300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1011	Open in IMG/M
3300026502\|Ga0255350_1090373	Not Available	675	Open in IMG/M
3300027745\|Ga0209908_10221359	Not Available	525	Open in IMG/M
3300027853\|Ga0209274_10623670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	557	Open in IMG/M
3300027898\|Ga0209067_10217777	Not Available	1030	Open in IMG/M
3300028087\|Ga0255354_1008975	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	3161	Open in IMG/M
3300028087\|Ga0255354_1069707	Not Available	687	Open in IMG/M
3300028572\|Ga0302152_10012219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	2822	Open in IMG/M
3300028574\|Ga0302153_10267763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	584	Open in IMG/M
3300028748\|Ga0302156_10421323	Not Available	578	Open in IMG/M
3300028748\|Ga0302156_10503486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	516	Open in IMG/M
3300028762\|Ga0302202_10411375	Not Available	626	Open in IMG/M
3300028765\|Ga0302198_10138869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	1267	Open in IMG/M
3300028766\|Ga0302269_1087404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	926	Open in IMG/M
3300028779\|Ga0302266_10140298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	953	Open in IMG/M
3300028798\|Ga0302222_10064197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1479	Open in IMG/M
3300028798\|Ga0302222_10196576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	790	Open in IMG/M
3300028798\|Ga0302222_10446080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	506	Open in IMG/M
3300028813\|Ga0302157_10607581	Not Available	563	Open in IMG/M
3300028860\|Ga0302199_1004446	All Organisms → cellular organisms → Bacteria	6383	Open in IMG/M
3300028874\|Ga0302155_10251215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	765	Open in IMG/M
3300028882\|Ga0302154_10074695	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1873	Open in IMG/M
3300028909\|Ga0302200_10432666	Not Available	608	Open in IMG/M
3300029883\|Ga0311327_10311259	Not Available	1020	Open in IMG/M
3300029907\|Ga0311329_10181432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1631	Open in IMG/M
3300029907\|Ga0311329_10636845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	701	Open in IMG/M
3300029915\|Ga0311358_10116180	All Organisms → cellular organisms → Bacteria	2674	Open in IMG/M
3300029916\|Ga0302148_1001395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	7067	Open in IMG/M
3300029952\|Ga0311346_10569080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1026	Open in IMG/M
3300029953\|Ga0311343_10303514	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1546	Open in IMG/M
3300029953\|Ga0311343_10810443	Not Available	762	Open in IMG/M
3300029954\|Ga0311331_11061479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	697	Open in IMG/M
3300029955\|Ga0311342_10640351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	852	Open in IMG/M
3300029982\|Ga0302277_1012480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5035	Open in IMG/M
3300029985\|Ga0302280_1111400	Not Available	1035	Open in IMG/M
3300029986\|Ga0302188_10074546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1546	Open in IMG/M
3300029993\|Ga0302304_10395360	Not Available	501	Open in IMG/M
3300029999\|Ga0311339_10864893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	862	Open in IMG/M
3300030004\|Ga0302186_10095266	Not Available	1115	Open in IMG/M
3300030011\|Ga0302270_10051182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2872	Open in IMG/M
3300030044\|Ga0302281_10109210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	1264	Open in IMG/M
3300030044\|Ga0302281_10187642	Not Available	877	Open in IMG/M
3300030045\|Ga0302282_1194061	Not Available	771	Open in IMG/M
3300030054\|Ga0302182_10355262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	615	Open in IMG/M
3300030506\|Ga0302194_10006841	All Organisms → cellular organisms → Bacteria	6824	Open in IMG/M
3300030506\|Ga0302194_10075965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1554	Open in IMG/M
3300030507\|Ga0302192_10012214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5121	Open in IMG/M
3300030508\|Ga0302185_10014718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3807	Open in IMG/M
3300030508\|Ga0302185_10087844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1134	Open in IMG/M
3300030518\|Ga0302275_10492774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	617	Open in IMG/M
3300030519\|Ga0302193_10354656	Not Available	755	Open in IMG/M
3300030646\|Ga0302316_10267568	Not Available	693	Open in IMG/M
3300030687\|Ga0302309_10086163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1709	Open in IMG/M
3300030687\|Ga0302309_10444187	Not Available	625	Open in IMG/M
3300030688\|Ga0311345_10111027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3079	Open in IMG/M
3300030886\|Ga0265772_107869	Not Available	506	Open in IMG/M
3300031027\|Ga0302308_10665222	Not Available	594	Open in IMG/M
3300031258\|Ga0302318_10068167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1502	Open in IMG/M
3300031258\|Ga0302318_10171163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1030	Open in IMG/M
3300031344\|Ga0265316_11231054	Not Available	518	Open in IMG/M
3300031708\|Ga0310686_103825466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	1396	Open in IMG/M
3300031788\|Ga0302319_11943243	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → Blastopirellula marina	502	Open in IMG/M
3300033405\|Ga0326727_10078059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4655	Open in IMG/M
3300033405\|Ga0326727_10560335	All Organisms → cellular organisms → Bacteria → Acidobacteria	968	Open in IMG/M
3300033983\|Ga0371488_0526357	Not Available	531	Open in IMG/M
3300034065\|Ga0334827_156798	Not Available	704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Host-Associated	Host-Associated	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.45%
Aquatic	Environmental → Aquatic	21.57%
Plants	Host-Associated → Plants	0.98%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	62.75%
Freshwater	Environmental → Aquatic → Freshwater	18.63%
Soil	Environmental → Terrestrial → Soil	14.71%
Sediment	Environmental → Aquatic → Sediment	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	62.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Loam	Environmental → Terrestrial → Soil → Loam	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	62.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.84%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	37.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	12.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.80%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	8.82%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.90%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.98%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.98%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023228	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T75	Environmental	Open in IMG/M
3300023247	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T50	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028087	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T50	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030508	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030886	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070761_110086812	3300005591	Soil	SDFILAGATAVGVGAEMLPKEALHFRQEDRIRELAGRFLTMVRDARSLRETYY*
Ga0075019_100970273	3300006086	Watersheds	IGIGGELLPKEALHFKQADRIHELAGRFISMVREARALKDTYY*
Ga0075014_1000346731	3300006174	Watersheds	AFDFIQAGATAIGLGGELLPKEALHFRQEDRIRELANRFLSLVRDARAVKDTYY*
Ga0116113_11979212	3300009638	Peatland	FIQAGATAIGLGGELLPKEALHFRQEDRIRELASRFLGLVRDARALRETYY*
Ga0116113_12137351	3300009638	Peatland	LPKEALHLRQVDRIHELAGRFLTMVRDARSLRQIYY*
Ga0116121_10746051	3300009644	Peatland	QLTAFDFIQAGATAIGLGGELFPKEALHFRQDDRIRELASRFLGLVRDARALRETYY*
Ga0116121_13130431	3300009644	Peatland	GELFPKEALHFRQEDRIRELANRFLGLVRDARALRETYY*
Ga0181539_10314654	3300014151	Bog	PKEALHFRQEDRIHELAGRFLAKVRDARALRETYY*
Ga0181517_103468931	3300014160	Bog	PKEALHFRQEDRIRELASRFLGLVKDARALRETYY*
Ga0181529_101205011	3300014161	Bog	KEALHFRQEDRIHELASTFLGLVRDARALRETYY*
Ga0181528_104796022	3300014167	Bog	GATAIGLGGELFPKEALHFRQVDRIQELAKRFLGLVRDARALRDTYY*
Ga0181534_100008081	3300014168	Bog	LLPKEALHFRQADRIHELASRFLGLVRDARALRDTYY*
Ga0181534_100209751	3300014168	Bog	PKEALHYRQDDRIQELAGRFLSKVREARALRDTYY*
Ga0181534_101475991	3300014168	Bog	DFILAGATAIGLGGELLPIEALHFRQDDRIRELASRFLAMVRDARALRETFY*
Ga0181531_100279012	3300014169	Bog	VGGEMLPKEALHFRQEDRIHELASRFLSMVKDARALRETYY*
Ga0181535_101034231	3300014199	Bog	TAIGLGGELLPKEALSFHQTDRIHELAGRYLAMVRDARALRQTYF*
Ga0181535_103315162	3300014199	Bog	GLGGELLPTEALHFRQENRIHELARRFISMVKDARALRETYY*
Ga0181526_109546771	3300014200	Bog	ILAGATAIGVGGEILPKEALHFRQVDRIHELVGRFLTMVKDARSLRETYY*
Ga0182014_101899253	3300014491	Bog	AIGVGGGLLPREALHFRQADRIHELAGRFLAMVKDARSLRDTYY*
Ga0182014_102055601	3300014491	Bog	AADFILAGATAIGLGGELLPMEALHFHQEDRIRELASRFLNMVKDARALRETYY*
Ga0182013_101901043	3300014492	Bog	ELLPKEALHFRQEDRIRELASRFLGLVKDARALRETYY*
Ga0182013_104924251	3300014492	Bog	NQVTAKDFILAGATAIGVGGELLPKEALHFRQMDRIEELAARFRAMVKEARALRNTYY*
Ga0181522_102802302	3300014657	Bog	FDFIQAGASAIGLGGELFPKEALHFRQEDRIRELANRFRGLVKDARALRETYY*
Ga0182030_101613001	3300014838	Bog	DFIVAGATAIGLGGELLPKEALHFRQQDRIRELAGRFLAMVRDARVMRETYY*
Ga0182030_101669431	3300014838	Bog	LPKEALHLRQTDRIQELASRFLAMVRDARALREIYY*
Ga0182027_118326932	3300014839	Fen	GAELLPKEALHFRQEDRIHELAGRFLAKVRDARALRETYY*
Ga0181520_103224922	3300017988	Bog	GEMLPKEALHFRQEDRIHELASRFLSMVKDARALRETYY
Ga0187887_105903111	3300018043	Peatland	VGGELLPKEALHFRQEDRIRESAGRFLAMVRDARVLAETYY
Ga0210388_106001021	3300021181	Soil	FILAGATAIGVGSVLLPREALHFRQEDRIRELAGRFLGMVRDARALADTFY
Ga0210391_106777112	3300021433	Soil	SDFILAGATAIGVGGELLPREALHLRQEDRIRELAGRFLAMVRDARSLRDTYY
Ga0210398_101606712	3300021477	Soil	LIVSGGVNQMTAFDFILAGATAIGVGGELLPKEALQFRQVDRIRELAGRFLAQVKAARASQEVYH
Ga0224526_10010749	3300022872	Soil	GGVNQLTAFDFIQAGATAIGLGGELLPKEALHFRQEDRIRELASRFLGLVRDARALRETY
Ga0224555_10184486	3300023088	Soil	DFILAGATAIGVGGELLPKEALHLRQADRIQELANRFLAMVRDARALREIYY
Ga0224558_11385531	3300023090	Soil	LLPKEALHFRQDDRIRELASRFVGLVRDARALREIYY
Ga0224530_10407432	3300023228	Soil	QLTAFDFIQAGATAIGLGGELLPKEALHFRQEDRIRELASRFLGLVKDARALRETYY
Ga0224529_10190631	3300023247	Soil	VNQLTATDFILAGATAIGLGGELLPMEALHFRQEDRIQELASRFLNMVKDARALRESYY
Ga0208190_10403001	3300025473	Peatland	PKEALHFRQEDRIHELSGRFLAKVRDARALRETYY
Ga0255350_10903732	3300026502	Soil	ATAIGLGGELLPKEALHFRQEDRIRELASRFLSLVRDARALRETYY
Ga0209908_102213592	3300027745	Thawing Permafrost	GELLPKEALHFRQDDRIRELASRFVGLVRDARALREIYY
Ga0209274_106236702	3300027853	Soil	VSDFILAGATAVGVGAEMLPKEALHFRQEDRIRELAGRFLTMVRDARSLRETYY
Ga0209067_102177771	3300027898	Watersheds	IGIGGELLPKEALHFKQADRIHELAGRFISMVREARALKDTYY
Ga0255354_10089754	3300028087	Soil	GGELLPMEALHFRQEDRIQELASRFLNMVKDARALRESYY
Ga0255354_10697071	3300028087	Soil	LLPKEALHFHQTDRIHELASRFLGLVRDARALRETYY
Ga0302152_100122194	3300028572	Bog	DFILAGATAIGLGGELLPKEALHFRQEDRIRELASRFLSLVRDARALRETYY
Ga0302153_102677632	3300028574	Bog	LAGATAIGVGGELLPKEALHFRQEDRIRELAGRFLAMVRDARVLRETYY
Ga0302156_104213232	3300028748	Bog	AIGLGGELLPKEALHFRQDDRIRELASRFVGLVRDARALREIYY
Ga0302156_105034862	3300028748	Bog	GGELLPKEALHFRQEDRIRELAGRFIGMVKDARALADTYY
Ga0302202_104113752	3300028762	Bog	LTAFDFIQAGASAIGLGGELLPKEALHFRQADRIRELASRFLSLVRDARALRETYY
Ga0302198_101388691	3300028765	Bog	GVNQLTAFDFIMAGATAIGVGGELLPKEALHFRQEDRIRELAGRFIGMVKDARALADTYY
Ga0302269_10874042	3300028766	Bog	DFILAGATAIGLGGQLLPKEALHFRQVDRIRELAGRFLAMVKDARTMKDIYY
Ga0302266_101402982	3300028779	Bog	GATAIGVGGELLPKEALHFRQEDRIRELAGRFLAMVRDARVLRETYY
Ga0302222_100641972	3300028798	Palsa	IAGATAIGVGGVLLPKEALHFRQEDRIRELAGRFLGMVRDARALAATYY
Ga0302222_101965761	3300028798	Palsa	LPKEALHFRQVDRIRELAGRFLGMVRDARALADTYY
Ga0302222_104460802	3300028798	Palsa	ASDFILAGATAIGVGGELLPREALHFRQADRITELAGRYLTMVKDARALREVYY
Ga0302157_106075811	3300028813	Bog	GATAIGLGGELLPMEALHFRQEDRIQELASRFLNMVKDARALRESYY
Ga0302199_10044461	3300028860	Bog	ATAIGLGGQLLPKEALHFRQVDRIRELAGRFLAMVKDARTMKDIYY
Ga0302155_102512151	3300028874	Bog	NQLTAFDFIMAGATAIGVGGELLPKEALHFRQEDRIRELAGRFIGMVKDARALADTYY
Ga0302154_100746953	3300028882	Bog	AIGLGGQLLPKEALHFRQVDRIRELAGRFLAMVKDARTMKDIYY
Ga0302200_104326661	3300028909	Bog	GELLPIEALHFRQEDRIRELASRFLVMVRDARVLRETYY
Ga0311327_103112591	3300029883	Bog	GGVNQLTAFDFIQAGATAIGLGGELLPKEALHFRQDDRIRELASRFVGLVRDARALREIY
Ga0311329_101814321	3300029907	Bog	LAGATAIGVGGELLPKEALHLRQADRIQELANRFLAMVRDARALREIYY
Ga0311329_106368451	3300029907	Bog	GGELLPKEALHLRQADRIHELAGRFLTMVKDARALRQIYY
Ga0311358_101161801	3300029915	Bog	GVNQLTAFDFIQAGATAIGLGGELLPKEALHFRQEDRIRELASRFLGLVRDARALRETYY
Ga0302148_100139512	3300029916	Bog	LHFRQVDRIHELAKRFLGLVRDARALRDTYYSALF
Ga0311346_105690802	3300029952	Bog	GGELLPKEALHFRQADRIHELASRFLAMVKDARSLKDTYY
Ga0311343_103035141	3300029953	Bog	DFIQAGATAIGLGGELFPKEALHFRQDDRIRELASRFLGLVRDARALRETYY
Ga0311343_108104431	3300029953	Bog	GLGGELLPKEALHFRQVDRIRELAGRFLAMVKDARAMREIYY
Ga0311331_110614792	3300029954	Bog	LPNEALQFRQEDRIRELASRFLGLVRDARALREIYY
Ga0311342_106403511	3300029955	Bog	NQLTASDYILAGASAIGLGGELLPREALHFRQIDRIRELASRFLGLVRDARSLRETYY
Ga0302277_10124801	3300029982	Bog	DFILAGATAIGLGGELLPMEALHFRQEDRIQELASRFLNMVKDARALRESYY
Ga0302280_11114003	3300029985	Fen	TAIGLGGELLPMEALHFRQEDRIQELASRFLNMVKDARALRESYY
Ga0302188_100745462	3300029986	Bog	VNQLTASDFILAGATAIGVGGELLPKEALHLRQADRIQELANRFLAMVRDARALREIYY
Ga0302304_103953602	3300029993	Palsa	TAIGVGGELLPKEALHFRQVDRIRELAGRFLGMVRDARALADTYY
Ga0311339_108648932	3300029999	Palsa	QVTAFDFIVAGASAIGVGGELLPKEALHLRQENRIHELSRRFLGMVRDARALRDTFY
Ga0302186_100952661	3300030004	Bog	LGGELLPMEALHFRQEDRIQELASRFLNMVKDARALRESYY
Ga0302270_100511821	3300030011	Bog	PKEALHLRQEDRIHELANRFLAKVKEARALREVYY
Ga0302281_101092101	3300030044	Fen	LTAFDFIMAGATAIGVGGELLPKEALHFRQEDRIRELAGRFIGMVKDARALADTYY
Ga0302281_101876421	3300030044	Fen	LTAFDFIQAGATAIGLGGELLPNEALQFRQVDRIRELASRFLGLVRDARALRDTYY
Ga0302282_11940611	3300030045	Fen	IGLGGELLPKEALHFRQADRIRELASRFLSLVRDARALRETYY
Ga0302182_103552621	3300030054	Palsa	GVGGELLPREALHLRQVDRINELAGRFLAMVRDARSLRDTYY
Ga0302194_100068411	3300030506	Bog	GLGGELLPKEALHFRQEDRIRELASRFLSLVRDARALRETYY
Ga0302194_100759652	3300030506	Bog	GELLPKEALHLRQADRIQELANRFLAMVRDARALREIYY
Ga0302192_100122141	3300030507	Bog	AIGVGGELLPKEALHLRQTDRIQELASRFLAMVRDARALREIYY
Ga0302185_100147185	3300030508	Bog	ELLPKEALHFRQEDRIRELASRFLGLVRDARALRETYY
Ga0302185_100878441	3300030508	Bog	TAIGVGGELLPKEALHFRQEDRIRELAGRFLAMVRDARVLRETYY
Ga0302275_104927741	3300030518	Bog	PKEALHFRQDDRIRELAGRFIGMVRDARALADTYY
Ga0302193_103546562	3300030519	Bog	AFDFIQAGASAIGLGGELLPKEALHFRQADRIRELASRFLSLVRDARALRETYY
Ga0302316_102675681	3300030646	Palsa	VGGVLLPKEALHFRQEDRIRELAGRFLGMVRDARALAATYY
Ga0302309_100861633	3300030687	Palsa	LLPKEALHFRQVDRIHELAGRFLAMVKDARTMKDIYY
Ga0302309_104441871	3300030687	Palsa	ASAIGVGGELLPKEALHLRQENRIHELSRRFLGMVRDARALRDTFY
Ga0311345_101110274	3300030688	Bog	TAIGVGGELLPKEALHLRQADRIQELANRFLAMVRDARALREIYY
Ga0265772_1078691	3300030886	Soil	AIGVGGELLPKEALHFRQEDRIRELAGRFLGMVRDARVLRETYY
Ga0302308_106652221	3300031027	Palsa	GATAIGVGGVLLPKEALHFRQEDRIRELAGRFLGMVRDARALAATYY
Ga0302318_100681671	3300031258	Bog	ELLPKQALHFRQDDRIRELASRFVGLVRDARALREIYY
Ga0302318_101711631	3300031258	Bog	FIMAGATAIGVGGELLPKEALHFRQDDRIRELAGRFIGMVRDARALADTYY
Ga0265316_112310541	3300031344	Rhizosphere	LTAFDFIQAGASAIGLGGELLPKEALHFHQADRIRELASRFLGLVRDARALRETYY
Ga0310686_1038254662	3300031708	Soil	LLPKEALHFRQEDRIRELAGRFIGTVRDARALADTYY
Ga0302319_119432431	3300031788	Bog	GVNQLTATDFILAGATAIGMGGELLPKEALHFRQEDRIRELAGRFLGMVRDARALAGTYY
Ga0326727_100780591	3300033405	Peat Soil	PKEALHFRQTDRINELAGRFLGLVRDARALREIYY
Ga0326727_105603351	3300033405	Peat Soil	ILAGATAIGLGGELLPKEALHFRQQDRIRELASRFLGLVRDARALRETYY
Ga0371488_0526357_394_531	3300033983	Peat Soil	TAIGLGGELFPKEALHFRQEDRIRELANRFLGLVRDARALRETYY
Ga0334827_156798_2_148	3300034065	Soil	AGATAIGLGGELLPKEALHFRQDDRIRELASRFVGLVRDARALREIYY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101692

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences