Metagenome Family F101742

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F101742
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	44 residues
Representative Sequence	KLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Number of Associated Samples	72
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.02 %
% of genes from short scaffolds (< 2000 bps)	79.41 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (85.294 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (50.980 % of family members)
Environment Ontology (ENVO)	Unclassified (47.059 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.941 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.40% β-sheet: 0.00% Coil/Unstructured: 72.60%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07722	Peptidase_C26	42.16
PF13561	adh_short_C2	6.86
PF12704	MacB_PCD	6.86
PF00106	adh_short	2.94
PF01979	Amidohydro_1	1.96
PF01402	RHH_1	0.98
PF05168	HEPN	0.98
PF00731	AIRC	0.98
PF07963	N_methyl	0.98
PF12019	GspH	0.98
PF03681	Obsolete Pfam Family	0.98
PF01850	PIN	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.98
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.29 %
Unclassified	root	N/A	14.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.29 %
Unclassified	root	N/A	14.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.29 %
Unclassified	root	N/A	14.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.75 %
Unclassified	root	N/A	14.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.49 %
Unclassified	root	N/A	14.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.49 %
Unclassified	root	N/A	14.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.49 %
Unclassified	root	N/A	14.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10172735	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300002562\|JGI25382J37095_10163721	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300002907\|JGI25613J43889_10193830	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300002914\|JGI25617J43924_10089732	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300004080\|Ga0062385_10175268	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300004080\|Ga0062385_10629900	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005174\|Ga0066680_10085115	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300005178\|Ga0066688_10326286	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300005446\|Ga0066686_10061906	All Organisms → cellular organisms → Bacteria → Acidobacteria	2318	Open in IMG/M
3300005553\|Ga0066695_10367760	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300005557\|Ga0066704_10056327	All Organisms → cellular organisms → Bacteria → Acidobacteria	2496	Open in IMG/M
3300005559\|Ga0066700_10025787	All Organisms → cellular organisms → Bacteria	3367	Open in IMG/M
3300006173\|Ga0070716_100627893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300006794\|Ga0066658_10013266	All Organisms → cellular organisms → Bacteria → Acidobacteria	3082	Open in IMG/M
3300006796\|Ga0066665_10194718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1569	Open in IMG/M
3300006804\|Ga0079221_10177125	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300007255\|Ga0099791_10309152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300007258\|Ga0099793_10021577	All Organisms → cellular organisms → Bacteria → Acidobacteria	2651	Open in IMG/M
3300009088\|Ga0099830_10018685	All Organisms → cellular organisms → Bacteria	4465	Open in IMG/M
3300009088\|Ga0099830_11115476	Not Available	654	Open in IMG/M
3300009089\|Ga0099828_10243702	All Organisms → cellular organisms → Bacteria → Acidobacteria	1611	Open in IMG/M
3300009089\|Ga0099828_10630014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300009089\|Ga0099828_11648115	Not Available	564	Open in IMG/M
3300009089\|Ga0099828_11924659	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300009090\|Ga0099827_10609691	All Organisms → cellular organisms → Bacteria → Acidobacteria	941	Open in IMG/M
3300009090\|Ga0099827_11853322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300010320\|Ga0134109_10030059	All Organisms → cellular organisms → Bacteria → Acidobacteria	1722	Open in IMG/M
3300010361\|Ga0126378_10633304	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300011269\|Ga0137392_10151315	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300011270\|Ga0137391_10130848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2181	Open in IMG/M
3300011270\|Ga0137391_10402059	All Organisms → cellular organisms → Bacteria → Acidobacteria	1170	Open in IMG/M
3300011270\|Ga0137391_10698443	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300012096\|Ga0137389_10420907	All Organisms → cellular organisms → Bacteria → Acidobacteria	1142	Open in IMG/M
3300012096\|Ga0137389_10936438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300012189\|Ga0137388_11721758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012203\|Ga0137399_10679144	Not Available	867	Open in IMG/M
3300012203\|Ga0137399_11239561	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300012205\|Ga0137362_10462761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300012205\|Ga0137362_11346458	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300012210\|Ga0137378_10367514	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300012211\|Ga0137377_11922558	Not Available	509	Open in IMG/M
3300012362\|Ga0137361_10180855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1900	Open in IMG/M
3300012363\|Ga0137390_10500649	All Organisms → cellular organisms → Bacteria → Acidobacteria	1189	Open in IMG/M
3300012363\|Ga0137390_11062504	Not Available	760	Open in IMG/M
3300012363\|Ga0137390_11947389	Not Available	515	Open in IMG/M
3300012582\|Ga0137358_10014405	All Organisms → cellular organisms → Bacteria → Proteobacteria	4990	Open in IMG/M
3300012582\|Ga0137358_10023922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3955	Open in IMG/M
3300012582\|Ga0137358_10158627	All Organisms → cellular organisms → Bacteria → Acidobacteria	1542	Open in IMG/M
3300012582\|Ga0137358_10935385	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300012917\|Ga0137395_11170053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300012918\|Ga0137396_10051175	All Organisms → cellular organisms → Bacteria → Acidobacteria	2833	Open in IMG/M
3300012924\|Ga0137413_11836252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012925\|Ga0137419_10054298	Not Available	2598	Open in IMG/M
3300012925\|Ga0137419_10471601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300012927\|Ga0137416_10065920	Not Available	2606	Open in IMG/M
3300012971\|Ga0126369_10375646	Not Available	1452	Open in IMG/M
3300015054\|Ga0137420_1465879	All Organisms → cellular organisms → Bacteria	4144	Open in IMG/M
3300015241\|Ga0137418_10232185	All Organisms → cellular organisms → Bacteria → Acidobacteria	1576	Open in IMG/M
3300016404\|Ga0182037_11591829	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300018006\|Ga0187804_10046849	Not Available	1682	Open in IMG/M
3300020579\|Ga0210407_10399423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300020579\|Ga0210407_10523823	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300020580\|Ga0210403_10956785	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300020581\|Ga0210399_10021822	All Organisms → cellular organisms → Bacteria	5075	Open in IMG/M
3300021170\|Ga0210400_10176460	Not Available	1730	Open in IMG/M
3300021178\|Ga0210408_10010534	All Organisms → cellular organisms → Bacteria → Acidobacteria	7701	Open in IMG/M
3300021432\|Ga0210384_10432977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1185	Open in IMG/M
3300021474\|Ga0210390_10551691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300021478\|Ga0210402_11469628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300024330\|Ga0137417_1224134	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300025939\|Ga0207665_11159435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300026301\|Ga0209238_1069071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1245	Open in IMG/M
3300026330\|Ga0209473_1020270	All Organisms → cellular organisms → Bacteria → Acidobacteria	3115	Open in IMG/M
3300026497\|Ga0257164_1053698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300026532\|Ga0209160_1215226	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300026548\|Ga0209161_10119969	All Organisms → cellular organisms → Bacteria → Acidobacteria	1557	Open in IMG/M
3300026551\|Ga0209648_10057751	All Organisms → cellular organisms → Bacteria → Acidobacteria	3300	Open in IMG/M
3300026557\|Ga0179587_11142775	Not Available	512	Open in IMG/M
3300027671\|Ga0209588_1057034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1262	Open in IMG/M
3300027671\|Ga0209588_1088358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300027826\|Ga0209060_10306604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300027862\|Ga0209701_10043235	Not Available	2906	Open in IMG/M
3300027862\|Ga0209701_10163904	Not Available	1348	Open in IMG/M
3300027862\|Ga0209701_10330535	Not Available	868	Open in IMG/M
3300027875\|Ga0209283_10168436	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300027882\|Ga0209590_10025993	All Organisms → cellular organisms → Bacteria	3027	Open in IMG/M
3300027903\|Ga0209488_10019324	All Organisms → cellular organisms → Bacteria → Acidobacteria	4944	Open in IMG/M
3300027903\|Ga0209488_10122443	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300027903\|Ga0209488_10446087	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300027903\|Ga0209488_10537878	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300031561\|Ga0318528_10090121	All Organisms → cellular organisms → Bacteria → Acidobacteria	1599	Open in IMG/M
3300031718\|Ga0307474_10585974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300031740\|Ga0307468_101907181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031823\|Ga0307478_10634546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300031823\|Ga0307478_10693091	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300031962\|Ga0307479_10024174	All Organisms → cellular organisms → Bacteria	5754	Open in IMG/M
3300031962\|Ga0307479_12081408	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300032180\|Ga0307471_100446681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1431	Open in IMG/M
3300032180\|Ga0307471_100707918	All Organisms → cellular organisms → Bacteria → Acidobacteria	1172	Open in IMG/M
3300032180\|Ga0307471_101822988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300032180\|Ga0307471_102767753	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300032180\|Ga0307471_104039605	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.06%
Aquatic	Environmental → Aquatic	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.06%
Freshwater	Environmental → Aquatic → Freshwater	2.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Loam	Environmental → Terrestrial → Soil → Loam	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	50.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_101727352	3300002560	Grasslands Soil	PRPSRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALTPSASLRA*
JGI25382J37095_101637211	3300002562	Grasslands Soil	SPRPGRKLGHITVRAASPERLALRLSELPAFFHRPDFCLDAALVHSASLRA*
JGI25613J43889_101938301	3300002907	Grasslands Soil	PRPGRKLGHLTLRAASPERLGLRLSELPAFFHRPDFCLEAALAPSASLRA*
JGI25617J43924_100897322	3300002914	Grasslands Soil	HLTLRAASPERLALRLSELPTFFHRPDFCLDAALAPSASLRA*
Ga0062385_101752681	3300004080	Bog Forest Soil	RAGRKLGHITLRAASTEQLALRLAELPGFFHRPEFCLDAVLARPLTSRA*
Ga0062385_106299001	3300004080	Bog Forest Soil	RAGRKLGHITLRAASAEQLASRLAELPGFFHRPEFCLDAVLARPLTSRA*
Ga0066680_100851154	3300005174	Soil	PGRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAHSASARL*
Ga0066688_103262861	3300005178	Soil	GRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0066686_100619064	3300005446	Soil	LGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALTPSASLRA*
Ga0066695_103677601	3300005553	Soil	KSPRPGRKLGHVTLRAASPERLALRLSELPAFFRRPDFCLDVALAPSASLRA*
Ga0066704_100563274	3300005557	Soil	LGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALVHSASLRT*
Ga0066700_100257875	3300005559	Soil	TVRAASPERLALRLSELPTFFHRPDFCLDSALSQSASQRA*
Ga0070716_1006278931	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LGHVTLRAGSAEQLASRLAELPGFFHRPEFCLDAVLARPAPLRA*
Ga0066658_100132664	3300006794	Soil	KLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALVHSASLRA*
Ga0066665_101947181	3300006796	Soil	RAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRD*
Ga0079221_101771253	3300006804	Agricultural Soil	GRKLGHVTLRAASPERLALRLSELPAFFHRPEFCLDSALVQSASQRV*
Ga0099791_103091521	3300007255	Vadose Zone Soil	LRAASPERLGLRLSELPAFFHQPDFCLEAALAPSASLRA*
Ga0099793_100215776	3300007258	Vadose Zone Soil	ERLALRLSELPAFFHRPDFCLDAALAPAPSASLRA*
Ga0099830_100186855	3300009088	Vadose Zone Soil	IALRGQIGEPPESSEVIALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0099830_111154762	3300009088	Vadose Zone Soil	GRKLGHVTLRAASPERLALRLSEFPAFFHRPAPAFDDALAPSASLRA*
Ga0099828_102437021	3300009089	Vadose Zone Soil	PGRKLGHVTLRAASPERLALRLSELPAFFHRPDFRLDAALAPSASLRA*
Ga0099828_106300142	3300009089	Vadose Zone Soil	SPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0099828_116481152	3300009089	Vadose Zone Soil	TLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRS*
Ga0099828_119246591	3300009089	Vadose Zone Soil	HLTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSAPLRA*
Ga0099827_106096912	3300009090	Vadose Zone Soil	AASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0099827_118533222	3300009090	Vadose Zone Soil	PGRKLGHLTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSAPLRA*
Ga0134109_100300593	3300010320	Grasslands Soil	GHITVRAASPERLALRLSELPAFFHRPDFCLDAALVHSASLRA*
Ga0126378_106333042	3300010361	Tropical Forest Soil	PLPGRKLCHVTVRAASLERLALRLSELPAFFHRPDFCLDSALSQSASQRA*
Ga0137392_101513151	3300011269	Vadose Zone Soil	TLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0137391_101308484	3300011270	Vadose Zone Soil	SVEQLASRLAELPVFFHRAEFCLEAGLGRAALRA*
Ga0137391_104020592	3300011270	Vadose Zone Soil	GHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0137391_106984432	3300011270	Vadose Zone Soil	VTLRASSPGQLASRLGELSSFFQRADFCLDAALAAQPPLRA*
Ga0137389_104209071	3300012096	Vadose Zone Soil	RAGRKLGHVTLRASSPEQLASRLAELPTYFHRPEFGLDAVLRHATPARG*
Ga0137389_109364381	3300012096	Vadose Zone Soil	GRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALIPAPSASLRA*
Ga0137388_117217582	3300012189	Vadose Zone Soil	PRLGRKLGHVTLRAASPERLALRLSELSAFFHRPDFCLDAALAPSASLRA*
Ga0137399_106791441	3300012203	Vadose Zone Soil	PERLALRLSELPAFFHRPDFSLDSALALSASLRA*
Ga0137399_112395612	3300012203	Vadose Zone Soil	TLRAASPERLALRLSELPAFFHRPDFCLDAVLAPSAPLRA*
Ga0137362_104627612	3300012205	Vadose Zone Soil	RAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0137362_113464581	3300012205	Vadose Zone Soil	PRPGRKLGHVTLRASSPEQLASRLGELPTYFHRPEFALDAALTRSVSSRA*
Ga0137378_103675144	3300012210	Vadose Zone Soil	SPERLALRLSELPAFFHRPDYCLDAALAPSASLRA*
Ga0137377_119225582	3300012211	Vadose Zone Soil	AASPERLALRLSELPAFFHRPDFCLDAALAPSASLRD*
Ga0137361_101808551	3300012362	Vadose Zone Soil	ASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0137390_105006491	3300012363	Vadose Zone Soil	RKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0137390_110625041	3300012363	Vadose Zone Soil	LGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSAPLRA*
Ga0137390_119473891	3300012363	Vadose Zone Soil	LRAASPEHLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0137358_100144051	3300012582	Vadose Zone Soil	KLGHVTLRAASPERLALRLSELPAFFHRPDFCLDSALAHHASLRA*
Ga0137358_100239226	3300012582	Vadose Zone Soil	VTLRAASAEQLASRLAELPSFFHRPEFCLDAVLARPLSSRA*
Ga0137358_101586271	3300012582	Vadose Zone Soil	KLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0137358_109353852	3300012582	Vadose Zone Soil	GRKLGHVTLRASSPEQLASRLGELPTYFHRPEFALDAALTRSVSSRA*
Ga0137395_111700531	3300012917	Vadose Zone Soil	PGRKLGHVTLRAASPERLGLRLSELPAFFHRPDFCLEAALAPSASLRA*
Ga0137396_100511751	3300012918	Vadose Zone Soil	PERLALRLSELPAFFHRPDFCLDAVLAPSAPLRA*
Ga0137413_118362522	3300012924	Vadose Zone Soil	GRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDSALAHHASLRA*
Ga0137419_100542981	3300012925	Vadose Zone Soil	RPGRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0137419_104716011	3300012925	Vadose Zone Soil	ASPERLALRLSELPAFFHRPDFCLDAALTPSASLRA*
Ga0137416_100659201	3300012927	Vadose Zone Soil	SPRPGRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA*
Ga0126369_103756461	3300012971	Tropical Forest Soil	HVTLRAASPERLALRLSELPAFFHRPDFCLDSVLAQSASSRL*
Ga0137420_14658795	3300015054	Vadose Zone Soil	LGHVTLRAASPNAFALRLSELPAFFHRPDFCLDAALAPSASLPA*
Ga0137418_102321851	3300015241	Vadose Zone Soil	PERLALRLSELPAFFHHPDFCLDAALAPSASLRA*
Ga0182037_115918291	3300016404	Soil	KSPRSVLKLGHVTLRASSAEQLATRLGDLPSVFHRPEFCLEAAFARSASLRA
Ga0187804_100468492	3300018006	Freshwater Sediment	PGRKLGHITLRAASPERLALRLSELPAFFHGPEFCLDAALSHAASLPA
Ga0210407_103994231	3300020579	Soil	VTVRALSAEHLAARVSELPAFFHRPEYCLKAALGSAAPARA
Ga0210407_105238232	3300020579	Soil	SPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0210403_109567851	3300020580	Soil	RKLGHVTLRASSPEQLASRLGELPTYFHRPEFALDAALDRSVSSRA
Ga0210399_100218221	3300020581	Soil	GHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0210400_101764601	3300021170	Soil	GRKLGHVTLRASSPEQLASRLGELPSYFHRPEFSLEAVLRQSASARR
Ga0210408_100105341	3300021178	Soil	PGRKLGHLTLRAASPERLALRLSELPAFFHRPDFCLAAALTPSASFRA
Ga0210384_104329773	3300021432	Soil	KLGHVTLRAASAEQLASRLAELPSFFHRPEFCLDAIFARPLSSRA
Ga0210390_105516912	3300021474	Soil	LRAASPERLALRLSELPAFFHHPDFCLDAALAPSTPLRA
Ga0210402_114696281	3300021478	Soil	RAASPERLALRISELPSFFLRPEFCLNSALGHSTSHRA
Ga0137417_12241343	3300024330	Vadose Zone Soil	LRAASPELLALRLSELPAFLHRPGLCLDAALAPAASLPA
Ga0207665_111594352	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AASSARVGRKLGHVTLRAGSAEQLASRLAELPGFFHRPEFCLDAVLARPAPLRA
Ga0209238_10690713	3300026301	Grasslands Soil	RKLGHITLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0209473_10202704	3300026330	Soil	RKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALVHSASLRA
Ga0257164_10536981	3300026497	Soil	PRPGRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0209160_12152262	3300026532	Soil	SPERLALRLSELPAFFHRPDFCLDAALTPSASLRA
Ga0209161_101199691	3300026548	Soil	PGRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALVHSASLRA
Ga0209648_100577515	3300026551	Grasslands Soil	VTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0179587_111427751	3300026557	Vadose Zone Soil	LGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0209588_10570342	3300027671	Vadose Zone Soil	TLRAASPERLAFRLSELPAFFHRPDFCLDSALALSASQRT
Ga0209588_10883581	3300027671	Vadose Zone Soil	ASPERLALRLSELPAFFHRPDFCLDSALAPSASLRA
Ga0209060_103066042	3300027826	Surface Soil	RAGRKLGHVTLRASSSEQLASRLSELSSFFHRPEYCLEAVLSRPASLRA
Ga0209701_100432351	3300027862	Vadose Zone Soil	ASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0209701_101639041	3300027862	Vadose Zone Soil	EPPESSEVIALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0209701_103305351	3300027862	Vadose Zone Soil	RKLGHVTLRAASPERLALRLSELPAFFHRHDFCLDAALAPSASLRS
Ga0209283_101684361	3300027875	Vadose Zone Soil	RKLGHLTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0209590_100259931	3300027882	Vadose Zone Soil	RLGRKLGHVTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0209488_100193246	3300027903	Vadose Zone Soil	RKLGHLTLRAASPERLALRLSELPAFFHRPDFCLDAALAPSAPLRA
Ga0209488_101224431	3300027903	Vadose Zone Soil	AGRKLGHVTLRAAAPEQLASRLGELPGFFHRPDFCLDAALSRAATPLRA
Ga0209488_104460872	3300027903	Vadose Zone Soil	RAGRKLGHVTLRAASPEQLASRLGELPGYFHRPEFGLDAVLGHSASARR
Ga0209488_105378781	3300027903	Vadose Zone Soil	SARAGRKLGHVTLRAASPEQLASRLGELPAYFHRPEFGLDAVLGHSASARR
Ga0318528_100901211	3300031561	Soil	KLGHVTVRAASPERLALRLSELPAFFHRPDFCLDSALSQSASQRA
Ga0307474_105859742	3300031718	Hardwood Forest Soil	LRAASAEQLASRLAELPGFFHRPEFCLDAALARPLSLRA
Ga0307468_1019071811	3300031740	Hardwood Forest Soil	GRKLGHVTLRAGSAEQLASRLAELPGFFHRPEFCLDAVLARPAPLRA
Ga0307478_106345461	3300031823	Hardwood Forest Soil	LRAASPERLALRLSELPAFFHRPDFCLDAALAPSAPLRA
Ga0307478_106930911	3300031823	Hardwood Forest Soil	LRAASPERLALRLSELPAFFHRPDFCLDAALAPSASLRA
Ga0307479_100241741	3300031962	Hardwood Forest Soil	TGRKLGHVSLRAASAEQLASRLAELSSFFHRPEFCLDAVLARPLSSRA
Ga0307479_120814082	3300031962	Hardwood Forest Soil	GRKLGHVTLRAASPEQLASRLGELPTYFHRPEFALDAALDRSVSSRA
Ga0307471_1004466812	3300032180	Hardwood Forest Soil	SPERLALRLSELPAFFHRPEFCLDAALTPSAPLRASS
Ga0307471_1007079181	3300032180	Hardwood Forest Soil	RKLGHVTLRAASPEQLASRLSELPSFFHRPDYCLDAALSRAASLRA
Ga0307471_1018229881	3300032180	Hardwood Forest Soil	VTLRAASPERLALRLSELPAFFHRPDFCLDAALAQSASLRA
Ga0307471_1027677532	3300032180	Hardwood Forest Soil	ARAGRKLGHVTLRASSPEQLASRLAELPTYFHRPEFCLDAVLRHSVSARG
Ga0307471_1040396051	3300032180	Hardwood Forest Soil	RAASPERLALRLSELPAFFHRPDFCLDAALSHSASIRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101742

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences