Metagenome Family F101752

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101752
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	71 residues
Representative Sequence	VRVAGLLGANALMLCTGLGMLPWLGVARSWRELVSRCGLAYLCGLVLTGILAAHLALVHVSFGW
Number of Associated Samples	87
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	78.43 %
% of genes from short scaffolds (< 2000 bps)	77.45 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.412 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.706 % of family members)
Environment Ontology (ENVO)	Unclassified (32.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.882 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.96% β-sheet: 0.00% Coil/Unstructured: 38.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00535	Glycos_transf_2	24.51
PF10604	Polyketide_cyc2	1.96
PF04854	DUF624	0.98
PF00857	Isochorismatase	0.98
PF02073	Peptidase_M29	0.98
PF07332	Phage_holin_3_6	0.98
PF10027	DUF2269	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.98
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.98
COG5578	Uncharacterized membrane protein YesL	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.41 %
Unclassified	root	N/A	20.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.41 %
Unclassified	root	N/A	20.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.41 %
Unclassified	root	N/A	20.59 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	78.43 %
Unclassified	root	N/A	20.59 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	66.67 %
Unclassified	root	N/A	20.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	65.69 %
Unclassified	root	N/A	20.59 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	65.69 %
Unclassified	root	N/A	20.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	65.69 %
Unclassified	root	N/A	20.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_109269282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300000956\|JGI10216J12902_110533597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300001686\|C688J18823_10405305	All Organisms → cellular organisms → Bacteria → Terrabacteria group	882	Open in IMG/M
3300002568\|C688J35102_119203657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300002568\|C688J35102_119888084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300004114\|Ga0062593_102293380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300004114\|Ga0062593_102808649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300004479\|Ga0062595_101389775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300004480\|Ga0062592_101789426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300005093\|Ga0062594_100502699	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1026	Open in IMG/M
3300005164\|Ga0066815_10010534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1136	Open in IMG/M
3300005181\|Ga0066678_10718983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300005181\|Ga0066678_10903075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300005187\|Ga0066675_10644549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	796	Open in IMG/M
3300005338\|Ga0068868_100635714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	949	Open in IMG/M
3300005436\|Ga0070713_100298997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1481	Open in IMG/M
3300005436\|Ga0070713_101507836	All Organisms → cellular organisms → Bacteria → Terrabacteria group	652	Open in IMG/M
3300005450\|Ga0066682_10630737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300005456\|Ga0070678_102023533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300005467\|Ga0070706_100548887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1075	Open in IMG/M
3300005540\|Ga0066697_10640113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300005549\|Ga0070704_101734769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300005561\|Ga0066699_10622495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300006031\|Ga0066651_10015312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3200	Open in IMG/M
3300006046\|Ga0066652_101552347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300006058\|Ga0075432_10108773	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300006173\|Ga0070716_100470030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300006800\|Ga0066660_11686279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300006806\|Ga0079220_11523005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300006854\|Ga0075425_101609026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300006871\|Ga0075434_102037000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300009012\|Ga0066710_100526712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1785	Open in IMG/M
3300009100\|Ga0075418_12584179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300009137\|Ga0066709_100162907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2873	Open in IMG/M
3300009137\|Ga0066709_101710367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300009176\|Ga0105242_11107844	All Organisms → cellular organisms → Bacteria → Terrabacteria group	806	Open in IMG/M
3300010037\|Ga0126304_11025569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300010044\|Ga0126310_10120034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1628	Open in IMG/M
3300010329\|Ga0134111_10107751	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1074	Open in IMG/M
3300010333\|Ga0134080_10401315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300010371\|Ga0134125_11398885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300010371\|Ga0134125_12412612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300010399\|Ga0134127_12009361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300010999\|Ga0138505_100059233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300012200\|Ga0137382_11345636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300012201\|Ga0137365_10279694	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1238	Open in IMG/M
3300012206\|Ga0137380_11312468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300012208\|Ga0137376_10156632	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1961	Open in IMG/M
3300012208\|Ga0137376_11236470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300012285\|Ga0137370_10476735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300012355\|Ga0137369_10248907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1345	Open in IMG/M
3300012356\|Ga0137371_10199364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1567	Open in IMG/M
3300012358\|Ga0137368_10782308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300012918\|Ga0137396_10114375	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1940	Open in IMG/M
3300012955\|Ga0164298_11232672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300012972\|Ga0134077_10590226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012977\|Ga0134087_10516729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300012977\|Ga0134087_10723132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300014157\|Ga0134078_10592083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300014166\|Ga0134079_10160536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300014823\|Ga0120170_1085708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300015374\|Ga0132255_101992675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300017997\|Ga0184610_1163493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300018061\|Ga0184619_10072355	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1524	Open in IMG/M
3300018433\|Ga0066667_10211007	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1437	Open in IMG/M
3300018433\|Ga0066667_10657397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300018433\|Ga0066667_10730274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300018433\|Ga0066667_12336574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300018482\|Ga0066669_11776831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300019866\|Ga0193756_1027787	All Organisms → cellular organisms → Bacteria → Terrabacteria group	796	Open in IMG/M
3300019867\|Ga0193704_1076622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300019869\|Ga0193705_1016908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1590	Open in IMG/M
3300021445\|Ga0182009_10340785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300021445\|Ga0182009_10815540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300025927\|Ga0207687_10199711	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1562	Open in IMG/M
3300025927\|Ga0207687_10805889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300026325\|Ga0209152_10402710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300028719\|Ga0307301_10223179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300028722\|Ga0307319_10030591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1667	Open in IMG/M
3300028778\|Ga0307288_10441863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300028782\|Ga0307306_10231565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.29%
Host-Associated	Host-Associated	14.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.41%
Plants	Host-Associated → Plants	14.71%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.82%
Sediment	Environmental → Aquatic → Sediment	4.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.90%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.98%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.98%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.98%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1092692821	3300000956	Soil	VRATGLLGANLLIAAVGLGTLPLLGVARSWRELLSRCGLAYLCGLVVVGIVSADLALVHVSVGWIALSVLAAGAVVVSVWRLR
JGI10216J12902_1105335972	3300000956	Soil	MRPAGLLGANLLMLVAGLGVLPLLGVARTWRELVFRSGLAYLSGLVLVGIVSAHLALVHVGVGWTWLAVLAA
C688J14111_100904623	3300001305	Soil	VRVAGLLGANALMLCIGLGLLPWLGVARSWRKLVSRSGLAYLCGLVVTGILAAHLALVHVAFGWVALAVVAAVSVVSG
C688J18823_103648943	3300001686	Soil	MRAEALVGANLLLLVAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLAGILSAHLALVHVGFGWAGLATLAVLSLAACFW
C688J18823_104053053	3300001686	Soil	MRAEALVGANLLLLVAGMGVLPLLRVAHSWRELAYRSGLAYLCGILLAGILSAHLALVHVGFGWAGLATLAVLSLAACFW
JGI24747J21853_10121241	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	MRAEALVGANLLMLLAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLAGILSAHLALVHVGFGWA
C688J35102_1192036572	3300002568	Soil	MRAEALVGANLLLLVAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLAGILSAHLALVHVGFGWAGLATLAVLSL
C688J35102_1198880843	3300002568	Soil	VRVAGLLAANALVACVGLGLLPWLGVSRSWRELVARSGLAYLCGLVVTGVLAAHLALVHVAFGW
Ga0062593_1022933802	3300004114	Soil	MRVAGLLGANALIAFVGLGVLPWLGVARSWRELLSRCGLAYLCGLVVTGILAAHLALLHVSFGWLALALAAAVSV
Ga0062593_1028086492	3300004114	Soil	MRVAGLLGANALIVCVGLGVLPWLGVARSWREFLSRCGLAYLCGLVATGILAAHLALL
Ga0062595_1013897752	3300004479	Soil	VRVAGLLGANALIFVAGLGLLPWLRVARSWRELVTRSGLAYLCGLVLTGIVAAHLSLVHV
Ga0062592_1017894261	3300004480	Soil	MRVAGLLGANALIVCVGLGVLPWLGVARSWREFLSRCGLAYLCGLVATGILAAHLALLHVSFGWLALALAAAVSVMSGVWH
Ga0062594_1005026991	3300005093	Soil	MRMAALVGANVLMLLAGLGMLPLLGIARSWRLLTVRCGLAYLCGLLLVGIVSAHLALVHVSFGWIGL
Ga0066815_100105341	3300005164	Soil	MRAEALVGANLLMLLAGLGVLPLLRVAHSWRELAYRSGLAYLCGMLLAGILSTHLALVHVGFGWAGLATLAVVSLA
Ga0066678_107189832	3300005181	Soil	MRMAALLGANALMLVAGLGMLPLLGVARSWRLLLFRCGLAYLCGILLVGTVSAHLALVHVSFGWIGLGLLAALSFGFCAWR
Ga0066678_109030752	3300005181	Soil	MRMAALLCANALMLVSGLGLLPLLGIARSWRLLLFRSGLAYLCGIVLVGIVSAHLALVHVEFGWIGLGLLA
Ga0066675_106445491	3300005187	Soil	MRAVGLLGANLLILVVGLGVLPFLGVARSWRELVTRCGLAYLCGLVLVGIVSAHLALVH
Ga0068868_1006357143	3300005338	Miscanthus Rhizosphere	MRMAALVGANVLMLLAGLGMLPLLGIARSWRLLTVRCGLAYLCGLLLVGIVSAHLALVHVGFGWIGLS
Ga0070713_1002989974	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRIAGLLGANALIFCIGLGLLPWLGVARSWRQLLSRCGLAYLCGLVVTGILAAHLALVH
Ga0070713_1015078362	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRISGLLGANALIFCIGVGLLPWLGVARSWRQLLSRCGLAYLCGLVVTGILAAHLALVHVSFGWLALGVAAAV*
Ga0066682_106307373	3300005450	Soil	VRVAGLLGANALIVCVGLGVLPWLGAAGSWRQLVSRCGLAYLCGLVVTGILAAHLALV
Ga0070678_1020235332	3300005456	Miscanthus Rhizosphere	VRVAGLLGANALMLCTGLGMLPWLGVARSWRELVSRCGLAYLCGLVLTGILAAHLALVHVSFGW
Ga0070685_100176751	3300005466	Switchgrass Rhizosphere	MRAEALVGANLLMLLAGLGVLPLLRVAHSWRELAYRSGLAYLSGILLSGILSAHLALVHVGFGWAGLATLA
Ga0070706_1005488873	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRVAGLLGANVLMLCAGVGVLPLLGVVRSSRSLLSRFGLTYLCGILVTGILAAELALVHVPFGWLALS
Ga0066697_106401132	3300005540	Soil	VRATGLLGANLLIVVVGLGALPLLGVARSWRELLSRCGLAYICGLVIVGIVSAHLALVHVSVGWIGLSVLAAGALGV
Ga0070704_1017347691	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VRVAGLLGANALIFVAGLGLLPWLRVARSWRELVARSGLAYLCGLVLTGIVAAHLSLVHVAFGWIALALLAALMAVSGAWHLRGTERP
Ga0066699_106224953	3300005561	Soil	VRVAQLLGANALMLLTGVGVLPWLGVARSWRTLGSRIGLAYFSGIVVTSIVAAHLALVHVGFGWTGLSVLA
Ga0066706_110877851	3300005598	Soil	MRAAGLIGANLLMLAVGLGLLPLLGAARSWRELVSRCGLAYLCGVVLVGIVSAHLALVHVAVG
Ga0068860_1002191661	3300005843	Switchgrass Rhizosphere	MRAEALVGANLLMLLAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLSGILSAHLALVHVGFGWAGLATLAVVSLA
Ga0066651_100153121	3300006031	Soil	VRVAGLLGANTLIVCVGLGVLPWLGAARSWRQLVARCGLAYLCGLVVTGILAAHLALVHVSFGWLALALAAAVSVVSGAWHLR
Ga0066652_1015523472	3300006046	Soil	MRAAGLLGANLLILVVGLGVLPFLGVARSWRELVARCGLAYLCGLVLVGIVSAHLALVHV
Ga0075432_101087731	3300006058	Populus Rhizosphere	MRVAALLAANVLMLGTGLGLLPLLGVARTWRELLARSGLAYLCGILLAAIVAANLALVHVSFGWIGLGVLAALSLVVGGLRLR
Ga0070716_1004700301	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VRVAGLLGASALMLCTGLGMLPWLGVARSWRELVSRCGLAYLCGLVLTGILAAHLALVHVSFGWLAL
Ga0075370_107436831	3300006353	Populus Endosphere	MRVAGLLGANALIVCVGLGVLPWLGVARSWRELLSRCGLAYLCGLVATGILAAHLALLHVSFG
Ga0066660_116862792	3300006800	Soil	MRATGLLGANLLMLVVGLGVLPLLGVARSWRELVSRSGLAYLCGLVLVGIVSAHLALVHVAVGW
Ga0079220_115230051	3300006806	Agricultural Soil	VRVAGLLGANALIFVVGLGLLPWLGVARSWRQLVSRCGLAYLCGLVAVGIVAAHLSLVHVSFGWPALAVMASVAAMLGVWHLRGSERP
Ga0075425_1016090261	3300006854	Populus Rhizosphere	LRVTALLGANALVLVTGLGLLPLLGAARSWAELWARSGLAWLCGLVATGIVAANLALVHVLFGWIGLATLTVT
Ga0075434_1020370002	3300006871	Populus Rhizosphere	VRVAGLLGANALIFCTGLGLLPWLGVARSWRQLVARCGLAYLCGLVAVGILAAHLALVHVSFGW
Ga0066710_1005267124	3300009012	Grasslands Soil	MRAAGLLGANLVMLVVGLGLLPLLGVARSWRELVSRSGLAYLCGLVLVGIVSAHLALVHVAVGWIGL
Ga0075418_125841791	3300009100	Populus Rhizosphere	MRVAGLLGANALIVCVGLGVLPWLGVARSWRELLSRCGLAYLCGLVATGILAAHLALLHVSFGWPALAASMIIG
Ga0066709_1001629075	3300009137	Grasslands Soil	VRVAHLLAANALMFVTGVGLLPWLGVARSWRTLLARIGLAYFCGIVATAIVAAHLALVHLGFGWTALSVLAALSALSSAWHL
Ga0066709_1017103673	3300009137	Grasslands Soil	MAGLLGANALMAAAGLGVLPLLGIARSWGELFARSGLAYLCGLVLVGGLSAELALVHLRFGWGGLLILAVTSAAFAVWLL
Ga0105242_111078441	3300009176	Miscanthus Rhizosphere	MRAAGLLGANLLILVAGLGLLPLLGVARSWRELLSRCGLGYLCGLVLVGIVSAHLALVHVSVGWAGLALLASG
Ga0126304_110255691	3300010037	Serpentine Soil	VRVAALLGANALMLVVGLGLLPWLKVASSWRELAAHSGLAYLCGLVATGILAANLALVHVTVGWAALAVFA
Ga0126310_101200344	3300010044	Serpentine Soil	MRLAGLLGANALMLCIGLGMLPWLGAARSWRMLVPRAGLAYLCGIVVTGTLAAHLALVHVSFGW
Ga0134111_101077513	3300010329	Grasslands Soil	MAALLGANALMLVAGLGMLPLLGIARSWRLLVFRCGLAYLCGILLVGIVSAQLALVHVSFGWIGL
Ga0134080_104013151	3300010333	Grasslands Soil	MAALLGANALMLAAGLGMLPLLGIARSWRLLIFRCGLAYLCGILLVGIVSAHLALVHVSFGWTGLAVTAGVSLG
Ga0134125_113988853	3300010371	Terrestrial Soil	MRVAALLGANALMLVAGLGMLPLLGIARSWRLLVFRCGLAYLCGLVLVGIVSAHLALVEVSFGW
Ga0134125_124126121	3300010371	Terrestrial Soil	VRVAGLLGANALMLCTGLGMLPWLGVARSWRELVSRCGLAYLCGLVLTGILAAHLALVHVSFGWLALALVTSVSVVSGAWHLK
Ga0134127_120093611	3300010399	Terrestrial Soil	MRAEALVGANLLMLLAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLAGILSAHLALVHVGFGWAGLATLAVVSLAA
Ga0138505_1000592331	3300010999	Soil	MRAEALVGANLLILLAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLAGIISAHLALVHVGFGWAG
Ga0137382_113456361	3300012200	Vadose Zone Soil	MAALLGANALMLVAGLGMLPLLGIARSWRLLVFRCGVAYLCGILLVGIVSAQLALVHVSFGWIGLALLAALSLGFCAWRLN
Ga0137365_102796943	3300012201	Vadose Zone Soil	MTALLGANALMLLAGLGLLPLLGIARSWRLLVFRCGLAYLCGIVLVGIVSALFALVHVSFGWI
Ga0137380_113124682	3300012206	Vadose Zone Soil	VRVAGLLGANALMLSAGLGVLPLLGVARSWRALVGRAGLAYLCGIVLAGIVAANLALVRTSFGWIGLSVLAVVSVVAGA
Ga0137376_101566325	3300012208	Vadose Zone Soil	MAALLGANALMLVSGLGLLPLLGIARSWRLLLFRSGLAYLCGIVLVGIVSAHLALVHVEFGWIGLGLL
Ga0137376_112364701	3300012208	Vadose Zone Soil	MRVAGLLGANALIVCVGVGVLPWLGVARSWRELLSRCGLAYLCGLVATGILAAHLALVNVSFGWLALALAAAVS
Ga0137370_104767351	3300012285	Vadose Zone Soil	MRVAGLLGANALIVCVGLGVLPWLGVARSWRELLSRCGLAYLCGLVVTGILAAHLALVHVSFGWLALALAA
Ga0137369_102489071	3300012355	Vadose Zone Soil	MFLAGLGVLPLLGAARSWQQLVGRSGLAYLCGIVLAGIVAANLALVRVSFGWI
Ga0137371_101993641	3300012356	Vadose Zone Soil	MRMAGLLGANALMAAAGLGVLPLLGVARSWRELVARSGLAYFCGLVLVGILSAELALVHVSFGWAGLLILTAISV
Ga0137368_107823081	3300012358	Vadose Zone Soil	MRMAGLLGANALMAAAGLGVLPLLGVARSWRELVARSGLAYFCGLVLVGILSAELALVHLSFGWA
Ga0157285_103474091	3300012897	Soil	MAALLGANALMLVAGLGMLPLLGIARSWRLLVFRCGLAYLCGLVLVGIVSAHLALVQVSFGWIGLVVMAALSLAFCAWRL
Ga0137396_101143751	3300012918	Vadose Zone Soil	MTALLGANALMLVAGFGMLPLLGIARSWRLLFFRCGLAYLCGILLVGIVSAHLALVHVSFGWIGLALLAALSLGFCAW
Ga0164298_112326721	3300012955	Soil	MAALLGANALMLVTGLGMLPLLGIARSWRLLVFRCGLAYLCGLVLVGIVSAHLALVQVSFGW
Ga0134077_105902261	3300012972	Grasslands Soil	MAALLGANALMLVAGLGMLPLLGIARSWRLLVFRCGLAYLCGTLLVGIVSAQLALMHVSFGWIGLALLA
Ga0134087_105167291	3300012977	Grasslands Soil	MFVTGVGLLPWLGVARSWRTLLARIGLAYFCGIVATAIVAAHLALVHLGFGWTALSVLAALSALS
Ga0134087_107231321	3300012977	Grasslands Soil	MAALLGANALMLVAGLGLLPLLGIARSWRLLLFRCGLAYLCGILLVGIVSAHLALVHVSFGWIGLG
Ga0157374_102112304	3300013296	Miscanthus Rhizosphere	MAALVGANVLMLLAGLGMLPLLGIARSWRLLTVRCGLAYLCGLLLVGIVSAHLALVHVSFGWIGLGALAALSLAFCAWRLN
Ga0134078_105920832	3300014157	Grasslands Soil	VRVAGLLGANALIFCIGLGLLPWLGVARSWRQLLSRCGLAYLCGLVLTGILAAHLALVHVSFGWLALVVV
Ga0134079_101605361	3300014166	Grasslands Soil	VRVAGLLGANTLIVCVGLGVLPWLGAARSWRQLVARCGLAYLCGLVVTGILAAHLALVHVSFGWLALALAAAVSVVSG
Ga0120170_10857081	3300014823	Permafrost	MAALLGANALMLVAGLGMLPLLGVARSWRLLVFRSGLAYLCGILLVGIVSAHLALVHVGFGWIGLALLAALSLGFC
Ga0157379_102966481	3300014968	Switchgrass Rhizosphere	MRAEALVGANLLMLLAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLAGILSAHLALVHVGFGWVGLATLAVVSLA
Ga0132255_1019926751	3300015374	Arabidopsis Rhizosphere	VRVAGLLGANALIFVVGLGLLPWLGVARSWRQLVSRCGLAYLCGLVAVGIVAAHLSLVH
Ga0184610_11634931	3300017997	Groundwater Sediment	MRMAALLGANALMLVAGLGMLPLLGIARSWRLLLFRCGLAYLCGILLVGIVSAHLALVHVSFGWIGLGVVAALSLGF
Ga0184620_101017131	3300018051	Groundwater Sediment	MRAEALIGANLLILLAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLAGILSAHLALVHVGFGWAGLAALAVVSLAACFW
Ga0184619_100723551	3300018061	Groundwater Sediment	MRMVALLGANALMLVAGLGMLPLLGIARSWRLLVFRCGLAYLCGLVLVGIVSAHLALVQVSFGWIGLGAMAALS
Ga0184617_10307003	3300018066	Groundwater Sediment	VRVAGLLGANALIFCVGLGMLPWLGVARSWRLLVSRCGLAYLCGLVVTGVLAAHLALLDVSFGWL
Ga0184625_100395454	3300018081	Groundwater Sediment	MRAEALVGANLLILLAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLAGIISAHLALVHVGFGWAGLATLAVV
Ga0066667_102110071	3300018433	Grasslands Soil	MRAAGLLGANLVMLVVGLGLLPLLGVARSWRELVSRSGLAYLCGLVLVGIVSAHLALVHVAVGWIGLAVLAACA
Ga0066667_106573971	3300018433	Grasslands Soil	VRVAELLGANALMFVTGLGLLPWLGVARSWRTLVARVGLAYFCGVAATAIVAAQLALVHLSVGWTGLFLFAGLSALSSARQ
Ga0066667_107302741	3300018433	Grasslands Soil	VRVAGLLGANALIFCIGLGLLPWLGVARSWRQLLSRCGLAYLCGLVLTGILAAHLALVHVSFGWLALVVVAAVSVVSGAWHLRATER
Ga0066667_123365742	3300018433	Grasslands Soil	VRVAQLLGANALMLVTGVGVLPWLGVARSWRTLWARIGLAYFCGIVVTAIVAAHLALVHVSFGWTGLSVTAALAAVSCAWHLRGT
Ga0066669_117768311	3300018482	Grasslands Soil	MRMAALLGANALMLVSGLGLLPLLGIARSWRLLLFRSGLAYLCGIVLVGIVSAHLALVHVEFGWIGLGLLAAVSLGF
Ga0193756_10277871	3300019866	Soil	MRAEALVGANLLMLLAGLGVLPLLRVAHSWRELAYRSGLAYLCGILLAGILSAHLALVHVGFGWAGLTTLAVVSLA
Ga0193704_10766221	3300019867	Soil	MRMAALLGANALMLVAGLGMLPLLGIARSWRLLVFRCGLAYLCGLVLVGIVSAHLALVQVSFGWIGLGVTATLS
Ga0193705_10169081	3300019869	Soil	VRVAGLLGANALIFCVGLGVLPWLGVARSWRLLVSRCGLAYLCGLVVTGVLAAHLALL
Ga0193700_10273653	3300019873	Soil	MRMAALLGANALMLVAGLGMLPLLGIARSWRLLAFRCGLAYLCGLVLVGIISAHLAL
Ga0210382_102333093	3300021080	Groundwater Sediment	MRMAALLGANALMLVSGLGLLPLLGIARSWRLLLFRCGLAYLCGILLVGIVSAHLALVHVSFGWIGLGVVAALSLGFCAWRL
Ga0182009_103407853	3300021445	Soil	VRVAGLLGANALIVCIGLGVLPWLGAARSWRELVSRCGLSYLCGLVVTGILAAHLALLHVSFGWLAL
Ga0182009_108155402	3300021445	Soil	VRVAGLLGANALIFCIGLGLLPWLRVARSWRQLWSRCGLAYLCGLVVTGILAAHLALVHVSFGWLAL
Ga0207687_101997111	3300025927	Miscanthus Rhizosphere	MRMAALVGANVLMLLAGLGMLPLLGIARSWRLLTVRCGLAYLCGLLLVGIVSAHLALVHVSFGWIGLGALAALSLAFC
Ga0207687_108058891	3300025927	Miscanthus Rhizosphere	VRVAGLLGANALIFCIGLGLLPWLRVARSWRELWSRCGLAYLCGLVATGILAAHLALVHV
Ga0207700_100566492	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VRISGLLGANALIFCIGVGLLPWLGVARSWRQLLSRCGLAYLCGLVVTGILAAHLALVHVSFGWLALGVAAAV
Ga0209152_104027101	3300026325	Soil	MRVAGLLGANALIVCIGFGVLPWLGVARSWRQLLSRCGLAYLCGLVVTGILAAHLALVHVSFGWAALAVAA
Ga0307295_100899041	3300028708	Soil	VRVAGLLGANALIFCVGLGVLPWLGVARSWRLLVSRCGLAYLCGLVVTGVLAAHL
Ga0307301_102231792	3300028719	Soil	MRMAALLGANALMLVAGLGMLPLLGIARSWRLLVFRCGLAYLCGILLVGIVSAHLALVQVSFGWIGLGVTAALSL
Ga0307315_100203221	3300028721	Soil	MRMAALLGANALMLVSGLGLLPLLGIARSWRLLLFRCGLAYLCGILLVGIVSAHLALVHVSFGWIG
Ga0307319_100305914	3300028722	Soil	VRVAGLLGANALIFCVGLGVLPWLGVARSWRLLVSRCGLAYLCGLVVTGVLAAHLALLHI
Ga0307318_100160245	3300028744	Soil	VRVAGLLGANALIFCVGLGVLPWLGVARSWRLLVSRCGLAYLCGLVVTGVLAAHLALLHVSFGWFA
Ga0307316_100955243	3300028755	Soil	VRVAGLLGANALIFCVGLGVLPWLGVARSWRLLVSRCGLAYLCGLVVTGVLAAHLALLDVSFGW
Ga0307280_102661301	3300028768	Soil	VRVAGLLGANALIFCVGLGVLPWLGVARSWRLLVSRCGLAYLCGLVVTGVLAAHLALLHVSFGWLAL
Ga0307288_104418632	3300028778	Soil	MRMAALLGANALMLVAGLGMLPLLGIARSWRLLAFRCGLAYLCGLVLVGIISAHLALVHVSFGWIGLGVTA
Ga0307306_102315652	3300028782	Soil	MRMAALLGANALMLVAGLGMLPLLGIARSWRLLAFRCGLAYLCGLVLVGIISAHLALVHVSFGWIGLGVTAAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences