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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F101758 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 102 |
| Average Sequence Length | 80 residues |
| Representative Sequence | MLQCIDGTLAARPNTSSTKHKKALTMNFVPPDTCLKDYKKRRSSFLKELIASTPNVSVRAKEFRRWIDENSPNSDNDEA |
| Number of Associated Samples | 82 |
| Number of Associated Scaffolds | 102 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 41.18 % |
| % of genes near scaffold ends (potentially truncated) | 41.18 % |
| % of genes from short scaffolds (< 2000 bps) | 97.06 % |
| Associated GOLD sequencing projects | 79 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.48 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (80.392 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.667 % of family members) |
| Environment Ontology (ENVO) | Unclassified (41.176 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (68.627 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 39.25% β-sheet: 0.00% Coil/Unstructured: 60.75% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.48 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 102 Family Scaffolds |
|---|---|---|
| PF03401 | TctC | 0.98 |
| PF13918 | PLDc_3 | 0.98 |
| PF00239 | Resolvase | 0.98 |
| PF04392 | ABC_sub_bind | 0.98 |
| PF09834 | DUF2061 | 0.98 |
| PF12833 | HTH_18 | 0.98 |
| PF02518 | HATPase_c | 0.98 |
| COG ID | Name | Functional Category | % Frequency in 102 Family Scaffolds |
|---|---|---|---|
| COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | Replication, recombination and repair [L] | 0.98 |
| COG2452 | Predicted site-specific integrase-resolvase | Mobilome: prophages, transposons [X] | 0.98 |
| COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 0.98 |
| COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 0.98 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 80.39 % |
| All Organisms | root | All Organisms | 19.61 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 16.67% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 14.71% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 12.75% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 8.82% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 6.86% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 5.88% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.90% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.90% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.92% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.96% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.96% |
| Tropical Rainforest Soil | Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil | 1.96% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.98% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.98% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.98% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.98% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.98% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000580 | Forest soil microbial communities from Amazon forest - 2010 replicate II A01 | Environmental | Open in IMG/M |
| 3300000597 | Forest soil microbial communities from Amazon forest - 2010 replicate II A1 | Environmental | Open in IMG/M |
| 3300000651 | Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10 | Environmental | Open in IMG/M |
| 3300000655 | Forest soil microbial communities from Amazon forest - 2010 replicate II A100 | Environmental | Open in IMG/M |
| 3300000793 | Forest soil microbial communities from Amazon forest - 2010 replicate II A001 | Environmental | Open in IMG/M |
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005363 | Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
| 3300005540 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 | Environmental | Open in IMG/M |
| 3300005576 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 | Environmental | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300006048 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Host-Associated | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010335 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012911 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2 | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300019263 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020005 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2 | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026330 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes) | Environmental | Open in IMG/M |
| 3300026550 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes) | Environmental | Open in IMG/M |
| 3300027874 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes) | Environmental | Open in IMG/M |
| 3300028720 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357 | Environmental | Open in IMG/M |
| 3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
| 3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
| 3300028875 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
| 3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031763 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29 | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300032035 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170 | Environmental | Open in IMG/M |
| 3300032064 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17 | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| AF_2010_repII_A01DRAFT_10130403 | 3300000580 | Forest Soil | MLQRADGTLAVRPSTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWVDENSPHSDNDEV* |
| AF_2010_repII_A1DRAFT_100830611 | 3300000597 | Forest Soil | MLQCTDGTLAARPNTSSKKRVEALTMKFVPPDTCLKDYKKRRSSFLNELIASTPNVSARAKEFRRWIDENSPHSDNDEA* |
| AF_2010_repII_A1DRAFT_100872222 | 3300000597 | Forest Soil | MLQCIDPTLAARPNTSSKKRMEALTMKFVPPDTCIKDYKKRRGAFLKELIASTPNVSARAKEFRRWIDENSPYSDNDEA* |
| AP72_2010_repI_A10DRAFT_10560311 | 3300000651 | Forest Soil | MLQRADGTLAVRPNTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWIDENSPYSDNDEA* |
| AF_2010_repII_A100DRAFT_10190642 | 3300000655 | Forest Soil | MLQRADGTLAVRPNTSTKKHXKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWIXENSPYSDNDEA* |
| AF_2010_repII_A100DRAFT_10200764 | 3300000655 | Forest Soil | LRRSATKGQMLQRADGTLAVRPSTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWVDENSPHSDNDEV* |
| AF_2010_repII_A001DRAFT_100628621 | 3300000793 | Forest Soil | LAVRPSTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWVDENSPHSDNDEV* |
| JGI10216J12902_1076306773 | 3300000956 | Soil | MLKRIDATPAARANPSRKKDMKAVSTNFVPPDTSFKDYKTRRRAFLTKLIASTPNVSVRAKEFRRWMDENAPDRDNDEA* |
| Ga0062595_1011345871 | 3300004479 | Soil | STDATPAARPNPSSKKDMKALTMKFVPPDASLKDYKTRRSAFLAEVIALTPNVSTRAKEFRRWIDENSPHGDNDEA* |
| Ga0066395_103630562 | 3300004633 | Tropical Forest Soil | MLQRADGTLAVRPNTSTKKHMKALTMKFVQPDTYLKDYKKRRSAFLTELIASTPNVSARAKEFRRWIDENSPYSDNNEA* |
| Ga0062594_1008205381 | 3300005093 | Soil | MEPHGKNTPKRALSIEARPNAASAKHEKALTMKSALSNTCHEDYKKRRSAFLNELIASTPNVIVRAKEFRRWIDENSPNGDQ* |
| Ga0066388_1011141032 | 3300005332 | Tropical Forest Soil | MLQCTEGTLAARPNTSTTKHKKASTMKLVPPDTCLKDYRKRRSAFLEELIASTPNVSVRAKEFRRWIDENSPYSHNDEA* |
| Ga0066388_1077817772 | 3300005332 | Tropical Forest Soil | MLQRTDATPAARANPSSKKHMKGLTMKFVPPDTSLKDYKTRRSAFLTQLIASTPNVSARAREFRRWMDENSPQSDNDEA* |
| Ga0070671_1010401381 | 3300005355 | Switchgrass Rhizosphere | THGKGIHPKGLHFEASPNTSSTKHKKASTMKSIPPESFLKDYKKRRSAFLEELIASTPNLSVRAKEFRRWIDENSPHSDNDEA* |
| Ga0008090_100448521 | 3300005363 | Tropical Rainforest Soil | MLQRTDATPAARANPSSKKHMKGLTMKFVPPDTSLKDYKTRRSAFLTQLIASTPNVSARAKEFRRWMDENSPQSDNDEA* |
| Ga0008090_100672062 | 3300005363 | Tropical Rainforest Soil | MLQRADGTLAVRPNTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWIEENSPYSDNDEA* |
| Ga0070709_106880592 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MLQRADGTLAVRPNTSTKKHMKALTMKFVPPDICLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWIDENSPYSDNDKA* |
| Ga0066697_103284651 | 3300005540 | Soil | MRPTEGKRTALSIEASPNTSSTKHKKASTMKSIPPDSYLKDYKKRRSAFLEELIASTPNLTVRAKEFRRWIDENSPHRDDDEA* |
| Ga0066708_102558662 | 3300005576 | Soil | MRPTEGKRTALSIEASPNTSSTKHKKASTMKSIPPDSYLKDYKKRRSAFLEELIASTPNLTVRAKEFQRWIDENSPHRDDDEA* |
| Ga0066905_1008490332 | 3300005713 | Tropical Forest Soil | MLQCIDGTLAARPNTSSTKHKKALTMNFVPPDTCLKDYKKRRSSFLKELIASTPNVSVRAKEFRRWIDENSPNSDNDEA* |
| Ga0066903_1044196912 | 3300005764 | Tropical Forest Soil | MLQCTDGTLAARPNTSSTKHKKALTMEFAPPDTCLKDYKKRRNSFLKELIASTPNVSVRAKEFRRWIDEN |
| Ga0066903_1059345593 | 3300005764 | Tropical Forest Soil | GQMLQRADGTLAVRPSTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWVDENSPHSDNDEV* |
| Ga0066903_1065524391 | 3300005764 | Tropical Forest Soil | TKGQMLQRADGTLAVRPNTSTKKHMKALTMKFVPPDTCLKDYKKRRNLFLNELIASTPNVSTRAKEFRRWIDESSPYSDDDEAQNFVDYSRCHGAKEPC* |
| Ga0066903_1070531823 | 3300005764 | Tropical Forest Soil | MSSKKHIKALTMKSAPPDTCLKDYKKRRSAFLNELIASTPNVSARAKEFRRWIDENSPLATMTKPKS* |
| Ga0075363_1004912701 | 3300006048 | Populus Endosphere | QSTDATPAARPNPSSKKDMKALTMKFVPPDTSLKDYKTRRSAFLRELIASTPNVSARAKEFRRWMDENSPYRDNDEG* |
| Ga0070716_1003523232 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MRPTEGKGTALSIEASPNTSSTKHKKASTMKSIPPESFLKDYKKRRSAFLEELIASTPNLSVRAKEFRRWIDENSPHSDNDEA* |
| Ga0070712_1016756121 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MLQSTDATPAARPNPSSKKDMKALTMKFVPPDTSLKDYKTRRSAFLEEVIALTPNVSPRAKEFRRWIDENSPHGDNDEA* |
| Ga0079222_119124332 | 3300006755 | Agricultural Soil | MPQRTDATLASRPNPSRKKDMKASTMKLVPPDTSLKDYKTRRRAFLTQLIASTPNVSARAKEFRRWMDE |
| Ga0079222_119763641 | 3300006755 | Agricultural Soil | MPQRTDAMLASRPNPSRKKDMKASTMKLVPPDTSLKDYKTRRRAFLTQLIASTPNVSARAKEFRR |
| Ga0075421_1009241991 | 3300006845 | Populus Rhizosphere | MLQSIDGTPAGKTEPIEQEDMKALTMKFIPPDASLKDYKTRRSAFLEEVIALTPNVSTRAKEFRRWINENSPHGDNDEA* |
| Ga0075433_114005483 | 3300006852 | Populus Rhizosphere | DRRPRGHMLQSTDATPAARPNPSSKKDMKALTMKFAPPDASLKDYKTRRSAFLEEVIALTPNVSTRAKEFRRWIDQNSPHGDNDEA* |
| Ga0075426_113151452 | 3300006903 | Populus Rhizosphere | MRPTEGKGTALSIEASPNTSSTKHKKASTMKSIPPESFLKDYKKRRSAFLEELIASTPNLTVRAKEFRRWIDENSPHSDNDEA* |
| Ga0075424_1001562322 | 3300006904 | Populus Rhizosphere | MLQSIDGTPAGKTEPIEQEDMKALTMKFIPPDASLKDYKTRRSAFLEEVIALTPNVSTRAKEFRRWIDQNSPHGDNDEA* |
| Ga0111539_118659972 | 3300009094 | Populus Rhizosphere | MRPTEGKGTALSIEASPNTSSTKHKKASTMKSIPPESFLKDYKKRRSAFLEELIASTPNLSVRAKEFRRWIDENSPHNDNDEA* |
| Ga0105243_117072722 | 3300009148 | Miscanthus Rhizosphere | VIRRLKIKTHGKEIIPRGTLSMAARPKHKKASVMKFVSSDICPEDYRKRRTAFLKELIASTPNVSLRAKEFRRWIDENSRCSDNDKA* |
| Ga0111538_137489351 | 3300009156 | Populus Rhizosphere | MRPTEGNASQGTALSIEASPNTSSTEHKKASTMKLAPPDTHLKDYKKRRSAFLNELIASTSNVSVRAKEFRRWIHENSPHSDNDEA* |
| Ga0105249_130231121 | 3300009553 | Switchgrass Rhizosphere | MRRDPRKGSHLKGRLSIRERPSTSSTEHKKASIMKFVSPATHCHDYKKRRSAFLKELISSTPNVSLRAEEFRRWIDENSPNSDNDEA* |
| Ga0126380_103783382 | 3300010043 | Tropical Forest Soil | MLQCTDGTLAARPNTSSTKHKKALTMEFAPPDTCLKDYKKRRNSFLKELIASTPNVSVRAKEFRRWIDENSPNSDNDEA* |
| Ga0126380_115893261 | 3300010043 | Tropical Forest Soil | MLQCIDGTLAARPNTSSTKHKKALTMNFVPPDTCLKDYKKRRSSFLKELIASTPNVSVRAKEFRRWIDENSPNSDNDEA |
| Ga0126382_101530412 | 3300010047 | Tropical Forest Soil | MLQRTDGTLAARPNTSSTKHKKALTMEFAPPDTCLKDYKKRRNSFLKELIASTPNVSVRAKEFRRWIDENSPNSDNDEA* |
| Ga0134063_107499092 | 3300010335 | Grasslands Soil | MRPTEGKRTALSIEASPNTSSTKHKKASTMKSIPPDSYLKDYKKRRSAFLEELIASTPNLTVRAKEFRRWIDENSPHSDNDEA* |
| Ga0126370_119075721 | 3300010358 | Tropical Forest Soil | MLQRTDATPAARANPSSKKHMKGLTMKFVPPDTSLKDYKTRRSAFLTQLIASTPNVSARAKKFRRWIDENLPYSDNNEA* |
| Ga0126376_108588982 | 3300010359 | Tropical Forest Soil | MLQRADGALAVRPNASTKKAHEGLTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWIDENSPCSDKAASGNV* |
| Ga0126377_112980631 | 3300010362 | Tropical Forest Soil | QRADGTLAVRPSTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWIDENSPYSDNDEA* |
| Ga0126379_119905661 | 3300010366 | Tropical Forest Soil | MLQRTDARANPSSKKHMKGLTMKFVPPDTSLKDYKTRRSAFLTQLIASTPNVSARAKEFRRWMDENSPQSDNDEA* |
| Ga0126379_120768563 | 3300010366 | Tropical Forest Soil | IGLNLLRRSATKGQMLQRADGTLAVRPSTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWVDENSPHSDNDEV* |
| Ga0126381_1022550171 | 3300010376 | Tropical Forest Soil | APSIAARPNTSSSKHKKAPTMKFVPPDTCLKDYKERRGAFLKELIASTPNVSVRAKEFRRWIDEKLAL* |
| Ga0126381_1040571802 | 3300010376 | Tropical Forest Soil | MLQRTDATPAARANPSSKKHMKGLTMKFVPPDTSLKDYKTRRSAFLTQLIASTPNVSARAKEFRRWMDENSPYRDDDEA* |
| Ga0126383_116097631 | 3300010398 | Tropical Forest Soil | DGKATKASARPNTSSIRKVSTMNFVSPDSCLHDYKKRRSAFLQYLIASTPNVSLRAKEFRRWIDENSPYSDNDEA* |
| Ga0126383_122303241 | 3300010398 | Tropical Forest Soil | KACELALPQKGNLSRAAAPSIAARPNTSSSKHKKVPTMKFVSPDTCLKDYKERRSAFLKELIASTANVSVRAKEFRRWIDENSPYSDNDQA* |
| Ga0126383_125348143 | 3300010398 | Tropical Forest Soil | PSQGTALSIEASPNTSSTKHKKASTMKLVPSDTRLKDYKKRRSAFLQELIASTPNVSVRAKEFRRWIDENSPYGDNDEV* |
| Ga0134123_118789701 | 3300010403 | Terrestrial Soil | HGKNTPKRALSIVARPNAASAKHEKALTMKSALSNTCHEDYKKRRSAFLNELIASTPNVIVRAKEFRRWIDENSPNGDQ* |
| Ga0137363_110311862 | 3300012202 | Vadose Zone Soil | LNLLRRSATKGQMLQRTDGTLAARPNTSSKKHKKALTMKFVPPDSCLKDYKTRRSAFLTELIASTPNVSARAKEFRRWIDENSPYSDNDEA* |
| Ga0150985_1155217452 | 3300012212 | Avena Fatua Rhizosphere | MRERPSTSGTEHKKASIMKFVSPATRCHDYKKRRSAFLKELISSTPNVSLRAEEFRRWIDKNSPY |
| Ga0157301_103622802 | 3300012911 | Soil | MEPHGKNTPKRALSIVARPNAASAKHEKALTMKSALSNTCHEDYKKRRSAFLNELIASTPNVIVRAKEFRRWIDENSPNGDQ* |
| Ga0126375_101316622 | 3300012948 | Tropical Forest Soil | MLQCTDGTLAARPNTSSTKHKKALTMEFAPPDTCLKDYKKRRNSFLKELIASTPNVSMRAKEFRRWIDENSPNSDNDEA* |
| Ga0164298_101840632 | 3300012955 | Soil | MLQSTDATPAARPNPSSKKDMKALTMKFVPPDTSLKDYKTRRSAFLAEVIALTPNVSTRAKEFRRWIDENSPHGDNDEA* |
| Ga0164299_112408792 | 3300012958 | Soil | MRPTEENPLQGAALSIEASPNTSSTKHKKASTMKLVSPDTRLKDYKKRRSAFLDELIASTPNVSVRAKEFRRWIDENSPHSDNGEA* |
| Ga0164299_116212691 | 3300012958 | Soil | MLQSTDATPAARPNPSSKKDMKALTMKFDPPDTSLKDYKKRRSAFLNELIASTPNVSARAKEFRRWIHENSPYSDDHEA* |
| Ga0164301_101716732 | 3300012960 | Soil | MRPTEGKGTALSIEASPNTSSTKHKKASTMKSIPPDSFLKDYKKRRSAFLEELIASTPNLSVRAKEFRRWIEENSPHSNNDEA* |
| Ga0164301_103077072 | 3300012960 | Soil | MLQSTDATPAARPNPSSKKDMKALTMKFVPPDTSLKDYKTRRSAFLEEVIALTPNVSTRAKEFRRWIDENSPHGDNDEA* |
| Ga0126369_112075831 | 3300012971 | Tropical Forest Soil | LNLLRRSATKGQMLQRADGTLAVRPNTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWIDENSPYSYNDEA* |
| Ga0164309_100956022 | 3300012984 | Soil | MRPTEGKGTALSIEASPNTSSTKHKKASTMKSIPPEPCLKDYKKRRSAFLEELIASTPNLSVRAKEFRRWIDENSPHSDNDEA* |
| Ga0164309_104518462 | 3300012984 | Soil | MRPTEENPLQGAALSIEASPNTSSTKNKKASTMKLAPPDTHLKDYKKRRSAFLNELIASTSNVSVRAKEFRRWIEENSPHSNNDEA* |
| Ga0164304_113711481 | 3300012986 | Soil | MRPTEENPLQGAALSIEASPNTSSTKHKKASTMKSIPPDSFLKDYKKRRSAFLEELIASTPNLSVRAKEFRRWIDENSPHSDNDEA* |
| Ga0164305_110018481 | 3300012989 | Soil | MLQSTDATPAARPNPSSKKDMKALTMKFVPPDTSLKDYKTRRSAFLEEVIALTPNVSTRAKEFRRWIDENSPHGDNDEV* |
| Ga0157378_111266091 | 3300013297 | Miscanthus Rhizosphere | MLQSTDGTPAARPDTSSKKDMKALTMKFIPPDTSLKDYKTRRSAFLAEVIALTPNVSTRAKEFRRWIDENSPHGDNDEA* |
| Ga0163162_115916412 | 3300013306 | Switchgrass Rhizosphere | MRPTTLSIEASPNTSSTKHKKASTMKSIPPDSCLKDYKQRRSAFLEELIASTPNLSVRAKEFRRWIDENSPHSDNDEA* |
| Ga0132258_103500771 | 3300015371 | Arabidopsis Rhizosphere | MRATEGKRTALSTSNTKHKKASTMKSIPPDSYLKDYKKRRSAFLEELIASTPNLTVRAKEFRRWIDENSPHSDNDEA* |
| Ga0182035_104712081 | 3300016341 | Soil | RHFRLASPNTSSAKRKKASTMKLVPPETCLKDYKKRRSAFLEELIASTPNVSMRAKEFRRWIDENSPYSDNDEA |
| Ga0182034_113647912 | 3300016371 | Soil | ATALSIAARPNTSSSKHKKAPTMKFVPPDTCLKDYKERRGAFLKELIASTPNVSVRAKEFRRWIDENSPYSDNDQA |
| Ga0190270_120420161 | 3300018469 | Soil | ARKGTPSQGAVFDYGRPSASSTEHKKASTMKFVSPDTRCNDYKKRRSAFLMELIALTPNVSLRAQEFRRWIDKNSPYTDNDEA |
| Ga0184647_11047131 | 3300019263 | Groundwater Sediment | PRKGTHPKGRLSIRERPSTSSTEHKKASIMKFVSPATHCHDYKKRRSAFLKELISSTPNVSLRAREFRRWIDKNSLYSDNGEA |
| Ga0193697_10792791 | 3300020005 | Soil | PRKGTHPKGRLSIRERPSTSSTEHKKASIMKFVSPATHCHDYKKRRSAFLKELIASTQNVSLRAEEFRRWIDKNSPYSDNDEA |
| Ga0210407_106189011 | 3300020579 | Soil | AVRPNTSTKKHMKTLTMKFVPPDTCLKDYKKRRSAFLTELIASTPNVSAREEFRRWIDENSPYSANDEA |
| Ga0210397_109329091 | 3300021403 | Soil | MLQSTDATPAARPNPSSKKDMKALTMKFVPPDTSLKDYKTRRSAFLEEVIALTPNVSTRAKEFRRWIDENSPHGDNDEA |
| Ga0210387_108955241 | 3300021405 | Soil | MRPTEGEGTALSIEASPNTSSTKHKKASTMKSIPPESFLKDYKKRRSAFLEELIASTPNLSVRAKEFRRWIDENSPHSDNDEA |
| Ga0210394_110962543 | 3300021420 | Soil | PNTSSTKHKKASTMKLVSPDTRLKDYKKRRSAFLDELIASTPNVSVRAKEFRRWVHENSRHNDNDEA |
| Ga0210392_102393603 | 3300021475 | Soil | MRPTEENPLQGAALSIEASPNTSSTKNKKASTMKSIPPDSFLKDYKKRRSAFLEELIASTPNLSVRAKEFRRWIEENSPHSNNDEA |
| Ga0210410_115320671 | 3300021479 | Soil | MLQSTDATPAARPNPSSKKDMKALTMKFVPPDTSLKDYKTRRSAFLEEVIALTPNVSTRAKEFRRWIDENSPHGDN |
| Ga0242654_103170671 | 3300022726 | Soil | TDATLAARPNTSSTKHKKASTMKLVPPDSCIKDYKKRRSAFLDELIASTPNVSARAKEFRRWIDENSPHSDNDEA |
| Ga0207693_113325601 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | DGTLAVRPNTSTKKHMKALTMKFVPPDICLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWIDENSPYSDNDKA |
| Ga0207693_114191292 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MRPTEGKGTALSIEASPNTSSTKHKKASTMKSIPPESFLKDYKKRRSAFLEDLIASTPNLSVRAKEFRRWIDENSPHSDNDEA |
| Ga0209473_13225411 | 3300026330 | Soil | LSIEASPNTSSTKHKKASTMKSIPPDSYLKDYKKRRSAFLEELIASTPNLTVRAKEFRRWIDENSPHRDDDEA |
| Ga0209474_104147222 | 3300026550 | Soil | MRPTEGKRTALSIEASPNTSSTKHKKASTMKSIPPDSYLKDYKKRRSAFLEELIASTPNLTVRAKEFRRWIDENSPHRDDDEA |
| Ga0209465_103875072 | 3300027874 | Tropical Forest Soil | MLQRADGTLAVRPNTSTKKHMKALTMKFVPPDTCLKDYKKRRNSFLNELIASTPNVSTRAKEFRRWVDENSPHSDNDEV |
| Ga0307317_103142862 | 3300028720 | Soil | HPKGRLSIRERPSTSSTEHKKASIMKFVSPATHCHDYKKRRSAFLKELIASTQNVSLRAEEFRRWIDKNSPYSDNDEA |
| Ga0307296_106913321 | 3300028819 | Soil | RLSIRERPSTSSTEHKKASIMKFVSPATHCHDYKKRRSAFLKELISSTPNVSLRAEEFRRWIDKNSPYSDNDEA |
| Ga0307312_108394372 | 3300028828 | Soil | PFQGRLSIRERPSTSSTEHKKASIMKFVSPATHCHDYKKRRSAFLKELISSTPNVSLRAEEFRRWIDKNSPYSDNDEA |
| Ga0307289_102019942 | 3300028875 | Soil | MLQSTDGTPAARPNPSSKKDMKALTTKSVPPDTSLKDYKTRRNAFLAEVIALTPNVTTRAKEFRRWIDENSPHGDNDEA |
| Ga0307304_105857481 | 3300028885 | Soil | RLSIRERPSTSSTEHKKASIMKFVSPATHCHDYKKRRSAFLKELISSTPNVSLRAEEFRRWIDKNSPYNDNDEA |
| Ga0318516_106041302 | 3300031543 | Soil | MLQCTEGTLAARPNTSTTEHRKALTMKFVPPDTYLKDYKKRRSAFLKELIASTPNVSVRAKEFRRWIDENSPYNKMMCRA |
| Ga0318516_106226141 | 3300031543 | Soil | CGKTEHTSSTKHKKALTMKLVPPDTCLKDYKKRRSSFLEELIASTPNVSVRAKEFRRWIDENSPYSGNDET |
| Ga0306917_100490612 | 3300031719 | Soil | MLQCTEGTLAARPNTSTTEHRKALTMKFVPPDTYLKDYKKRRSAFLKELIASTPNVSVRAKEFRRWIDENSPYSDNDET |
| Ga0307468_1002738871 | 3300031740 | Hardwood Forest Soil | QRTDATPAARPKTSSKKHMKALTMKFDPPDTSLKNYKKRRSAFLNELIASTPNVSARAKEFRRWIDENSPYSDTHKV |
| Ga0318537_103714672 | 3300031763 | Soil | RYACGKTEHTSSTKHKKALTMKLVPPDTCLKDYKKRRSSFLEELIASTPNVSVRAKEFRRWIDENSPYSGNDET |
| Ga0307473_107035833 | 3300031820 | Hardwood Forest Soil | VDRRPRGHMLQSTDATPAARPNPSSKKDMKALTMKFVPPDTSLKDYKTRRSAFLEEVIALTPNVSTRAKEFRRWIDENSPHGDNDEA |
| Ga0307473_110793631 | 3300031820 | Hardwood Forest Soil | MLQRTDATPAARPKTSSKKHMKALTMKFDPPDTSLKNYKKRRSAFLNELIASTPNVSARAKEFRRWIDENSPYSDTHEA |
| Ga0310911_101086201 | 3300032035 | Soil | LPRRSATKGQMLQCTEGTLAARPNTSTTEHRKALTMKFVPPDTYLKDYKKRRSAFLKELIASTPNVSVRAKEFRRWIDENSPYNKMMCRA |
| Ga0318510_102323191 | 3300032064 | Soil | MLQCTEGTLAARPNTSTTEHRKALTIKFVPPDTYLKDYKKRRSAFLKELIASTPNVSVRAKEFRRWID |
| Ga0318510_102942443 | 3300032064 | Soil | KGNPSQGTALSIEASPNTSSTKHKKASTMKLVPPDTRLKDYKKRRSAFLQELIASTPNVSVRAKEFRRWIDENSPYGDNDEV |
| Ga0306920_1014958631 | 3300032261 | Soil | MLQWTDGTLAARPSTSSTKHKKALTMNFVPPDTCLKDYKKRRSAFLKELIASTPNVSARAKEFRRWIDENSPYSDNEAA |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |