Metagenome / Metatranscriptome Family F101781

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101781
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	73 residues
Representative Sequence	MGWLISVQIPDAPHRSLYATVASTYEQARLQVFNRCALTNETIRLERILTDEEIKQLGLQPGEVKLYAS
Number of Associated Samples	75
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.41 %
% of genes near scaffold ends (potentially truncated)	17.65 %
% of genes from short scaffolds (< 2000 bps)	84.31 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.824 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (12.745 % of family members)
Environment Ontology (ENVO)	Unclassified (26.471 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.314 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.59% β-sheet: 28.87% Coil/Unstructured: 51.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.375.1.1: NE1680-like	d2hfqa1	2hfq	0.66384
d.343.1.1: MM3350-like	d2i1sa1	2i1s	0.63236
d.355.1.1: RplX-like	d2jxta1	2jxt	0.63178
c.55.3.0: automated matches	d2ehga_	2ehg	0.61857
d.284.1.0: automated matches	d2zw2a_	2zw2	0.58605

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07728	AAA_5	9.80
PF00589	Phage_integrase	8.82
PF13356	Arm-DNA-bind_3	2.94
PF00004	AAA	2.94
PF00903	Glyoxalase	2.94
PF13531	SBP_bac_11	1.96
PF00533	BRCT	1.96
PF04964	Flp_Fap	1.96
PF03330	DPBB_1	1.96
PF04392	ABC_sub_bind	1.96
PF13467	RHH_4	0.98
PF04773	FecR	0.98
PF17036	CBP_BcsS	0.98
PF14534	DUF4440	0.98
PF14196	ATC_hydrolase	0.98
PF16188	Peptidase_M24_C	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.96
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	1.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
All Organisms	root	All Organisms	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
cellular organisms	root	All Organisms → cellular organisms	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.29 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.39 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.57 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.94 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.88 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.98 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.90 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.98 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.90 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Fimbriiglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus	0.98 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.90 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Fimbriiglobus ruber	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	0.98 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_1227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2742	Open in IMG/M
3300004114\|Ga0062593_100452731	Not Available	1170	Open in IMG/M
3300004156\|Ga0062589_100574666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	971	Open in IMG/M
3300004479\|Ga0062595_100077028	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300004479\|Ga0062595_100199664	Not Available	1236	Open in IMG/M
3300004643\|Ga0062591_100534819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1017	Open in IMG/M
3300005162\|Ga0066814_10017543	Not Available	962	Open in IMG/M
3300005332\|Ga0066388_100057143	All Organisms → cellular organisms → Bacteria → Proteobacteria	4088	Open in IMG/M
3300005332\|Ga0066388_106132338	Not Available	607	Open in IMG/M
3300005336\|Ga0070680_100130644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2101	Open in IMG/M
3300005347\|Ga0070668_101712801	Not Available	577	Open in IMG/M
3300005366\|Ga0070659_101254376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	656	Open in IMG/M
3300005434\|Ga0070709_10150580	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300005437\|Ga0070710_10124228	All Organisms → cellular organisms → Bacteria → Proteobacteria	1566	Open in IMG/M
3300005437\|Ga0070710_10160798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1392	Open in IMG/M
3300005439\|Ga0070711_100440966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1064	Open in IMG/M
3300005440\|Ga0070705_101891938	Not Available	507	Open in IMG/M
3300005543\|Ga0070672_100847426	Not Available	806	Open in IMG/M
3300005718\|Ga0068866_10976803	Not Available	600	Open in IMG/M
3300005719\|Ga0068861_102191951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300005764\|Ga0066903_100692218	All Organisms → cellular organisms → Bacteria → Proteobacteria	1794	Open in IMG/M
3300005764\|Ga0066903_100989455	Not Available	1536	Open in IMG/M
3300005764\|Ga0066903_101470310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1284	Open in IMG/M
3300005842\|Ga0068858_102176384	Not Available	548	Open in IMG/M
3300006028\|Ga0070717_10812212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	851	Open in IMG/M
3300006050\|Ga0075028_100253082	Not Available	968	Open in IMG/M
3300006172\|Ga0075018_10815423	Not Available	513	Open in IMG/M
3300006173\|Ga0070716_100503762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300006573\|Ga0074055_10737321	Not Available	767	Open in IMG/M
3300006804\|Ga0079221_11588965	Not Available	529	Open in IMG/M
3300009137\|Ga0066709_103418921	Not Available	576	Open in IMG/M
3300010043\|Ga0126380_11483412	Not Available	600	Open in IMG/M
3300010048\|Ga0126373_12435327	Not Available	583	Open in IMG/M
3300010359\|Ga0126376_10205151	Not Available	1637	Open in IMG/M
3300010366\|Ga0126379_11405677	Not Available	804	Open in IMG/M
3300010376\|Ga0126381_101641430	Not Available	929	Open in IMG/M
3300010376\|Ga0126381_103063223	Not Available	663	Open in IMG/M
3300010399\|Ga0134127_10696638	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300010400\|Ga0134122_10001777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	15664	Open in IMG/M
3300012948\|Ga0126375_11971932	Not Available	515	Open in IMG/M
3300012955\|Ga0164298_10119799	Not Available	1427	Open in IMG/M
3300012971\|Ga0126369_10129670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2338	Open in IMG/M
3300012971\|Ga0126369_11076385	Not Available	893	Open in IMG/M
3300012985\|Ga0164308_10634992	Not Available	913	Open in IMG/M
3300013105\|Ga0157369_10305581	Not Available	1654	Open in IMG/M
3300015371\|Ga0132258_10694761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2561	Open in IMG/M
3300015371\|Ga0132258_10940832	All Organisms → cellular organisms → Bacteria	2182	Open in IMG/M
3300015371\|Ga0132258_12454639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1305	Open in IMG/M
3300015371\|Ga0132258_12509200	Not Available	1289	Open in IMG/M
3300015371\|Ga0132258_12511377	Not Available	1289	Open in IMG/M
3300015371\|Ga0132258_12681868	Not Available	1243	Open in IMG/M
3300015371\|Ga0132258_13057146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1158	Open in IMG/M
3300015372\|Ga0132256_100907317	Not Available	997	Open in IMG/M
3300015372\|Ga0132256_102223347	Not Available	653	Open in IMG/M
3300015373\|Ga0132257_100803183	Not Available	1174	Open in IMG/M
3300015373\|Ga0132257_101488739	Not Available	863	Open in IMG/M
3300015374\|Ga0132255_105072253	Not Available	557	Open in IMG/M
3300016357\|Ga0182032_11615783	Not Available	564	Open in IMG/M
3300017974\|Ga0187777_10374960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	981	Open in IMG/M
3300018060\|Ga0187765_10070135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1850	Open in IMG/M
3300021344\|Ga0193719_10152751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	996	Open in IMG/M
3300021478\|Ga0210402_10263035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1594	Open in IMG/M
3300021560\|Ga0126371_11068358	Not Available	947	Open in IMG/M
3300025898\|Ga0207692_10664940	Not Available	674	Open in IMG/M
3300025905\|Ga0207685_10485447	Not Available	648	Open in IMG/M
3300025906\|Ga0207699_10093303	Not Available	1894	Open in IMG/M
3300025915\|Ga0207693_10054425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3139	Open in IMG/M
3300025916\|Ga0207663_10873390	Not Available	718	Open in IMG/M
3300025924\|Ga0207694_10205833	Not Available	1602	Open in IMG/M
3300025928\|Ga0207700_10370628	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	1250	Open in IMG/M
3300026118\|Ga0207675_101753349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	640	Open in IMG/M
3300027910\|Ga0209583_10165053	Not Available	918	Open in IMG/M
3300027910\|Ga0209583_10589749	Not Available	564	Open in IMG/M
3300030844\|Ga0075377_11557271	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300030844\|Ga0075377_11687875	Not Available	1532	Open in IMG/M
3300030916\|Ga0075386_12197610	Not Available	689	Open in IMG/M
3300030916\|Ga0075386_12230972	Not Available	1133	Open in IMG/M
3300030945\|Ga0075373_11306628	Not Available	617	Open in IMG/M
3300030945\|Ga0075373_11460541	Not Available	672	Open in IMG/M
3300031057\|Ga0170834_100291206	Not Available	1197	Open in IMG/M
3300031057\|Ga0170834_107186621	Not Available	688	Open in IMG/M
3300031122\|Ga0170822_10681603	Not Available	921	Open in IMG/M
3300031184\|Ga0307499_10009277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1971	Open in IMG/M
3300031231\|Ga0170824_120932402	Not Available	3645	Open in IMG/M
3300031231\|Ga0170824_127604557	Not Available	676	Open in IMG/M
3300031446\|Ga0170820_14753018	Not Available	662	Open in IMG/M
3300031446\|Ga0170820_16112622	Not Available	584	Open in IMG/M
3300031455\|Ga0307505_10036873	All Organisms → cellular organisms → Bacteria → Proteobacteria	2196	Open in IMG/M
3300031469\|Ga0170819_11195966	Not Available	1326	Open in IMG/M
3300031474\|Ga0170818_101703335	Not Available	1391	Open in IMG/M
3300031474\|Ga0170818_103855780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4551	Open in IMG/M
3300031716\|Ga0310813_10218105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1573	Open in IMG/M
3300031740\|Ga0307468_100105176	All Organisms → cellular organisms → Bacteria → Proteobacteria	1691	Open in IMG/M
3300032174\|Ga0307470_10042155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2270	Open in IMG/M
3300032174\|Ga0307470_10425174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	947	Open in IMG/M
3300033412\|Ga0310810_10239271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2009	Open in IMG/M
3300033433\|Ga0326726_10037516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4224	Open in IMG/M
3300033433\|Ga0326726_10471288	Not Available	1198	Open in IMG/M
3300033433\|Ga0326726_11759932	Not Available	603	Open in IMG/M
3300034090\|Ga0326723_0007600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4176	Open in IMG/M
3300034090\|Ga0326723_0044717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1866	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.41%
Host-Associated	Host-Associated	20.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.49%
Plants	Host-Associated → Plants	20.59%
Aquatic	Environmental → Aquatic	3.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.86%
Peat	Environmental → Terrestrial → Peat	4.90%
Sediment	Environmental → Aquatic → Sediment	3.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	18.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	9.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_519280	2035918004	Soil	MGWLISVQTPDAPHRSPYATVASTYEQARLQVFNRCSITNETIRLERILAETEVKQLGLA
deepsgr_02002210	2199352025	Soil	MAKPTSTNKQPMGWLISVQTPDAAHRSLYATVASTYEQARLQVFNRCALTSETIRLERILTDEEIKQVGLQPGEVKLYAA
Ga0062593_1004527313	3300004114	Soil	MGWLISVQAPDAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGLQPGDVKLYAT*
Ga0062589_1005746661	3300004156	Soil	MAHFKDRQTVRPMGWLISVEVLDGTRRPLYATVAGSYEKARLQVFNQCSLSSEVIRLERILTEPEIKQLGLQLGEVKLYST*
Ga0062595_1000770281	3300004479	Soil	MAKPTSTNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA*
Ga0062595_1001996642	3300004479	Soil	MRPMGWLISVQAPDAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGLQPGDVKLYAT*
Ga0062591_1005348191	3300004643	Soil	VRPMGWLISVEVLDGTRRPLYATVAGSYEKARLQVFNQCSLSSEVIRLERILTEPEIKQLGLQLGEVKLYST*
Ga0066814_100175432	3300005162	Soil	MRPMGWLISVQAPEATYRPLYATVANSYEQARLQVFNQCSLSNETIRLERILTEREIKLLGLQPCEVKLYAV*
Ga0066388_1000571432	3300005332	Tropical Forest Soil	MPKSTPTPRPMGWLISIEAADADYRPVYATVANTYEQARLQVFNRCAITSETIRLERILTDAEIKQLGLQPGEVKLYAT*
Ga0066388_1061323381	3300005332	Tropical Forest Soil	MGWLISVEAYDGSRRPLYATVANSYEQGRLQVFNYCSLTNEIVRLERILAEEEIKRLGLQPGEVKLYAT*
Ga0070680_1001306442	3300005336	Corn Rhizosphere	MGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA*
Ga0070668_1017128012	3300005347	Switchgrass Rhizosphere	MVKPTPTIRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA*
Ga0070659_1012543762	3300005366	Corn Rhizosphere	SRQGEMAKPTSTNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA*
Ga0070709_101505801	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRPMGWLISVQAPGAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGLQPGDVKLYAT*
Ga0070710_101242282	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRPMGWLISVEGPEHRPLYATVANSYEQGRLQVFNQCSLTSETLRLERILTEEEIKQLGLQPGEVKLYAT*
Ga0070710_101607982	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MVKPTPTIRQPMGWLISVQTPDAPHRSPYATVASTYEQARLQVFNRCSITNETIRLERILTETEVKQLGLQQGEVKLYAS*
Ga0070711_1004409662	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPTPTNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCGLTSETIRLERILTEAEVKQLGLQPGEVKLYAAA*
Ga0070705_1018919381	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPTSTNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLY
Ga0070672_1008474262	3300005543	Miscanthus Rhizosphere	MGWLISVQAPGAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGLQPGDVKLYAT*
Ga0068866_109768032	3300005718	Miscanthus Rhizosphere	MGWLISVQAPGAPHRSLCVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGLQPGDVKLYAT*
Ga0068861_1021919511	3300005719	Switchgrass Rhizosphere	TNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA*
Ga0066903_1006922183	3300005764	Tropical Forest Soil	MGWLISIEAADADYRPVYATVANTYEQARLQVFNRCAITSETIRLERILTDAEIKQLGLQPGEVKLYAT*
Ga0066903_1009894552	3300005764	Tropical Forest Soil	MRPTGWLISVQVHDGSRRPLYATVANTYEQAKLQVFNKCSLSNEVIRLERILTEAEIKHLGLQLTEVKLYAA*
Ga0066903_1014703102	3300005764	Tropical Forest Soil	MGRMGWLISVQALDGSRRPLYATVANTYEQAKLQVFNHCSLSDEVIRQERILTEAEIKQLGLQFAEVKLYAG*
Ga0068858_1021763842	3300005842	Switchgrass Rhizosphere	PEMRPMGWLISVQAPDAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGLQPGDVKLYAT*
Ga0070717_108122121	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGWLISVQTPDAPHRSPYATVASTYEQARLQVFNRCSITNETIRLERILTETEVKQLGLQQGEVKLYAS*
Ga0075028_1002530821	3300006050	Watersheds	MRPMGWLISVQSSGNGHRPLYATVANSHEQARLQVFNHCSITNETIRLERILTDGEINLLGLQPGEVKLYAT*
Ga0075018_108154231	3300006172	Watersheds	MRPMGWLISVQSPGDGHRPLYATVANSHEQARLQVFNHCSITNETIRLERILTDGEISLLGLQPGEVKLYAT*
Ga0070716_1005037622	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPTPTNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQQGEVKLYAS*
Ga0074055_107373212	3300006573	Soil	MRPMGWLISVQSPVAARRPLYATVANAHDQARLRVLKYCSITNETIRVERILSDEEIKRLGLQPGEVKLYAT*
Ga0079221_115889652	3300006804	Agricultural Soil	MAKPTSTNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNHCSITSETIRLERILTEAEIKQLGLQPGEVKLCAT*
Ga0066709_1034189212	3300009137	Grasslands Soil	MRPIGWLISVQAPEASHRRLYGTVAFTHEQARLQVFNQCSLSNETIRLERILTDGEIKLLGLHP
Ga0126380_114834121	3300010043	Tropical Forest Soil	MGRMGWLISVQVLDGSRRPLYATVANTYEQAKLQVFNKCSLSNEVIRLERILTEAEIKQLGLQFTEVKLYAA*
Ga0126373_124353272	3300010048	Tropical Forest Soil	LAILGLDEMKGPEMQPMGWLISVQVLDGSRRPLYATVANTYEQAKLQVFSKCSLSNEIIRLERILTEAEIKQLGLQLAEVKLYAT*
Ga0126376_102051513	3300010359	Tropical Forest Soil	LAILGLDEMKGPEMQPMGWLISVQVLDGSRRPLYATVANTYEQAKLQVFSKCSLSNEIIRLERILTEAEIKQLGLQHAEVKLYAT*
Ga0126379_114056773	3300010366	Tropical Forest Soil	MQPMGWLISVQVHDGSRRPLYATVANTYEQAKLQVFNKCSLSNEVIRLERILTEAEIKHLGLQLTEVKLYAA*
Ga0126381_1016414301	3300010376	Tropical Forest Soil	MGRMGWLISVQVLDGSRRPLYVTLANTYEQAKLQVFNHCSLSDEVIRLERILTEAEIKQLGLQFTEVKLYAA*
Ga0126381_1030632231	3300010376	Tropical Forest Soil	MGFLLSVEAIDGCRRPLYATVAESYEKARTQVFNHCSLTGEVIRLERLLGEMEIKQIGLQCGEVKLYAT*
Ga0134127_106966382	3300010399	Terrestrial Soil	RQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA*
Ga0134122_100017776	3300010400	Terrestrial Soil	MGWLISVQTPDAPHRSLYATVTSTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA*
Ga0126375_119719321	3300012948	Tropical Forest Soil	GQMPKSTPTPRPMGWLISIQAANAAYRPVYATVANTYEQARLQVFNRCAITSETIRLERILTDAEIKQLGLQPGEVKLYAT*
Ga0164298_101197993	3300012955	Soil	MGWLISVQAPGTPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGLQPGDVKLYAT*
Ga0126369_101296703	3300012971	Tropical Forest Soil	MGWLLSVQVLDGSRPLYATVANTYEQAKLQVFNKCSLSNEVIRLERILTEAEIKHLGLQLTEVKLYAT*
Ga0126369_110763852	3300012971	Tropical Forest Soil	MGWLISIEAADADYRPVYATVANTYEQARLQVFNRCAITSETIRLERILTDAEIKQLGLQPGSMLLKR*
Ga0164308_106349921	3300012985	Soil	MAKPTSTNRQPMGWLISVQTPDASHRSLYATVASTYEQARLTAFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA*
Ga0157369_103055811	3300013105	Corn Rhizosphere	MGWLISVQAPDAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERFLTDEEIKQLGLQPGDVKLYAT*
Ga0132258_106947613	3300015371	Arabidopsis Rhizosphere	MGWLISVQIPDAPHRSLYATVASTYEQARLQVFNRCSITNEIIRLERILTEAEVKQLGLQPGEVKLYAA*
Ga0132258_109408324	3300015371	Arabidopsis Rhizosphere	MGWLISVQAPAANYRQIYATIANTHEQARLQVFKYCSLTNETIRLERILTEAEIRQLGLQPGEVKLYAS*
Ga0132258_124546393	3300015371	Arabidopsis Rhizosphere	MGFLISVQAIDGSQRPLYATVAESYEKARVQVVNHCSLTGEIIRLERLLGDMEIKRVGVQSGEVKLYAA*
Ga0132258_125092002	3300015371	Arabidopsis Rhizosphere	MGWLISVQALDCSRRPLHATVGKSYEQAKLQVFNHCSLTNEVLRLERILADEEIKRLGLQPGEVKLYAA*
Ga0132258_125113771	3300015371	Arabidopsis Rhizosphere	MGWLISVQAPGANYRQLYATVANTHEQARLQVFNYCSAIDETIRLERILAEAEVKQLGIQPGEVKLYAT*
Ga0132258_126818682	3300015371	Arabidopsis Rhizosphere	MRSIGFLLSVQAIDGSGRPLYATVAESYEKARVQVFNHCCLTAEVIRLERLLGEMEVKRIGLQSGQVKLYAT*
Ga0132258_130571462	3300015371	Arabidopsis Rhizosphere	MRPMGWMISVQLADDSRRPLYATVANSYEQARLQIFNQCCLTSETIRLERILTEAETTQLGLEPGEVKLYAT*
Ga0132256_1009073172	3300015372	Arabidopsis Rhizosphere	MRPMGWMISVQLADDSRRPLYATVANSYEQARLQIFNQCCLTNETIRLERILTEAETTQLGLEPGEVKLYAT*
Ga0132256_1022233471	3300015372	Arabidopsis Rhizosphere	RPMGWLISVQPPDDSRRPLYATVANSYEQAKLQVCNQCSLSNEVLRLERILTEAEINQLGLQFTEVKLYAA*
Ga0132257_1008031831	3300015373	Arabidopsis Rhizosphere	MGWLISVQPPDDSRRPLYATVANSYEQAKLQVCNQCSLSNEVLRLERILTEAEINQLGLQFTQVKL
Ga0132257_1014887392	3300015373	Arabidopsis Rhizosphere	MRPMGWMISVQLADDSRRPLYATVANSYEQARLQIFNQCCLTSEIIRLERILTEAETKQLGLEPGEVKLYAT*
Ga0132255_1050722531	3300015374	Arabidopsis Rhizosphere	MGWLISVQIPDAPHRSLYATVASTYEQARLQVFNRCALTNETIRLERILTDEEIKQLGLQPGEVKLYAS*
Ga0182032_116157831	3300016357	Soil	MRSMGFLLSVAAIDGSRRPLYATVAESYEKARTQVFNHCSLTGEVIRLERLLGEMEIKKIGLQCGEVKLYAT
Ga0187777_103749602	3300017974	Tropical Peatland	MGWLISVEAYDGSRRPLYATVANSYEQGRLQVFNYCSLTNEIVRLERILAEEEIKRLGLQPGEVKLYAT
Ga0187765_100701352	3300018060	Tropical Peatland	MRPMGWLISVEAYDGSRRPLYATVANSYEQGRLQVFNYCSLTNEIVRLERILAEEEIKRLGLQPGEVKLYAT
Ga0193719_101527511	3300021344	Soil	KPTSTNKHPMGWLISVQTPDAAHRSLYATVASTYEQARLQVFNRCALTSETIRLERILTDEEIKQVGLQPGEVKLYAA
Ga0210402_102630352	3300021478	Soil	MGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCALTSEAIRLEKILTEAEVKQLGLQPGEVKLYAA
Ga0126371_110683581	3300021560	Tropical Forest Soil	MRPTGWLISVQVHDGSRRPLYATVANTYEQAKLQVFNKCSLSNEVIRLERILTEAEIKHLGLQLTEVKLYAT
Ga0207692_106649402	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GWLISVEGPEHRPLYATVANSYEQGRLQVFNQCSLTSETLRLERILTEEEIKQLGLQPGEVKLYAT
Ga0207685_104854472	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPTSTNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA
Ga0207699_100933032	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGWLISVQAPGAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGLQPGDVKLYAT
Ga0207693_100544254	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRPMGWLISVQAPGAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQVGLQPGEVKLYAA
Ga0207663_108733902	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAKPTPTNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCGLTSETIRLERILTEAEVKQLGLQPGEVKLYAAA
Ga0207694_102058333	3300025924	Corn Rhizosphere	MGWLISVQAPDAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGPQPGDVKLYAT
Ga0207700_103706282	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRPMGWLISVQAPGAPHRSLYVTLADSYEQGRLQVFNQCSLTSETIRLERILTDEEIKQLGLQPGDVKLYAT
Ga0207675_1017533491	3300026118	Switchgrass Rhizosphere	TNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCAITSETIRLERILTETEVKQLGLQPGEVKLYAA
Ga0209583_101650532	3300027910	Watersheds	MRPMGWLISVQSPGDGHRPLYVTVANSHEQARLQVFNHCSLTNETIRLERILTDGEINLLGLQPGEVKLYAT
Ga0209583_105897491	3300027910	Watersheds	MRPMGWLICVQTPEATYRPLYATVANSYEQARLQVFNQCSLTDETIRLERILTEREIKQLGLQSGEVKLYAA
Ga0075377_115572712	3300030844	Soil	GWLISVHAPDDIQRPLYATVANSYEDARLQVFNLHSLTNEVIRLERILAEAEIKRLGLQPGEVKLYAT
Ga0075377_116878754	3300030844	Soil	MGWLISVQALDCSRRPLYATVGKSYEQAKLQVLNHCSLTNEVLRLERILSDEEIKRLGLQPGEVKLYA
Ga0075386_121976102	3300030916	Soil	MGWLISVQALDCSRRPLYATVGKSYEQAKLQVLNHCSLTNEVLRLERMLSDEEIKRLG
Ga0075386_122309721	3300030916	Soil	MRPKGWLISVHAPDDIQRPLYATVANSYEDARLQVFNLHSLTNEVIRLERILAEAEIKRLGLQPGEVKLYAT
Ga0075373_113066281	3300030945	Soil	MQPMGWLISVRALDCSRRPLYATVGKSYEQAKLQVLNHCSLTNEVLRLERMLSDEEIKRLGLQPDEV
Ga0075373_114605412	3300030945	Soil	MRPKGWLISVHAPDDIQRPLYATVANSYEDARLQVFNLHSLTNEVIRLERILAEAEIKRLGLQPGEVKLYAS
Ga0170834_1002912062	3300031057	Forest Soil	MAKPTSTNKQPMGWLISVQTPDAAHRSLYATVASTYEQARLQVFNRCALTSETIRLERILTEAEVKQLGLQPGEVKLYAE
Ga0170834_1071866212	3300031057	Forest Soil	GWLISVRALDCSRRPRYATVGKSYEQAKLQVFNHCSLTNEDLRLERILADDEIKRLGLQLGEVKLYAT
Ga0170822_106816032	3300031122	Forest Soil	MAKPTSTNNQPMGWLISVQTPDAAHRSLYATVASTYEQARLQVFNRCALTSETIRLERILTEAEVKQLGLQPGEVKLYAE
Ga0307499_100092772	3300031184	Soil	MAKPTSTNKQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCALTSETIRLERILTDEEIKQVGLQPGEVKLYAA
Ga0170824_1209324024	3300031231	Forest Soil	MGWLISVQVLNCPRRPLYATVGKSYEQAKLQVFNHCSLTNEVLRLERILSDEEIKRLGLRPCEVKLYAT
Ga0170824_1276045571	3300031231	Forest Soil	MGWLISVQALDCSRRPLYATVGKSYEQAKLQVLNHCSLTNEVLRLERILSDEEIKRHGLQPGEVKLYAS
Ga0170820_147530182	3300031446	Forest Soil	MRPKGWLISVQAPDDFQRPLYATVANSYEDARLQVFNLHSLTNEVIRLERILAEAEIKRLGLQPGEVKLYAT
Ga0170820_161126221	3300031446	Forest Soil	MQPMGWLISVRALDCSRRPLYATVGKSYEQAKLQVFNHCSLTNEVLRLERILADEEIKRLGLQPGEVKLYAT
Ga0307505_100368732	3300031455	Soil	MAKPTSTNKQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCALTSETIRLERILTEAEVKQLGLQPGEVKLYAA
Ga0170819_111959665	3300031469	Forest Soil	MRPKGWLISVHAPDDFQRPLYATVANSYEDARLQVFNLHSLTNEVIRLERILAEAEIKRLGLQPGEVKLYAT
Ga0170818_1017033352	3300031474	Forest Soil	MGWLISVQGAEHRPLYATVANSYEQGRLQVFNRCSLTSETLRLERILTEAEIKQLGLQLGEVKLYAT
Ga0170818_1038557801	3300031474	Forest Soil	MRPMGWLISVQALDCSRRPLYATVGKSYEQAKLQVLNHCSLTNEVLRLERILSDEEIKRHGLQPGEVKLYAS
Ga0310813_102181052	3300031716	Soil	MGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCGLTSETIRLERILTEAEVKQLGLQPGEVKLYAAA
Ga0307468_1001051762	3300031740	Hardwood Forest Soil	MRPMGWLISVEGPEHRPLYATVANSYEQGRLQVFNQCSLTSETLRLERILTEDEIKQLGLQPGEVKLYAT
Ga0307470_100421552	3300032174	Hardwood Forest Soil	MAEPTPTNRQPMGWLISVQTPDAPHRSLFATVASTYEQARLHVFNRCALTGETIRLERILTETEVKQLGLQPGEVKLYAA
Ga0307470_104251742	3300032174	Hardwood Forest Soil	MAKPTPTNRQPMGWLISVQTPDAPHRSLFATVAGTYEQARLQVFNRCAVTGETIRLERILTGTEVKQLGLQPGEVKLYAA
Ga0310810_102392712	3300033412	Soil	MAKPTSTNRQPMGWLISVQTPDAPHRSLYATVASTYEQARLQVFNRCGLTSETIRLERILTEAEVKQLGLQPGEVKLYAAA
Ga0326726_1003751610	3300033433	Peat Soil	MRPMGWLISVQTPEATYRPLYATVANSYEQARLQVFNQCSLSNETVRLERILTDEEIKQLGLQPGEVQTVRHLTTVPRQ
Ga0326726_104712882	3300033433	Peat Soil	MRPMGWLISVQSPGDGHRPLYATVANSHEQARLQVSNHCSITNETIRLERILTDGEINLLGLQPGEVKLYAT
Ga0326726_117599321	3300033433	Peat Soil	PHSTATTEALLWRAKEDGMHPMGWLISVQTPGDGHRPLYATVANTHEQARLQVFNHCSITNETIRLERILTDGEINLLGLQPGEVKLYAT
Ga0326723_0007600_1614_1844	3300034090	Peat Soil	MGWLISVQTPEATYRPLYATVANSYEQARLQVFNQCSLSNETVRLERILTDEEIKQLGLQPGEVQTVRHLTTVPRQ
Ga0326723_0044717_961_1170	3300034090	Peat Soil	MGWLILVQAPDAQYRPLYATVANSYEQARLQVFNQCSLTDETIRLERILTEREIKHLGLQPGEVKLYAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101781

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences