Metagenome Family F101848

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101848
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	50 residues
Representative Sequence	MSPFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALVKEKK
Number of Associated Samples	72
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	11.76 %
% of genes near scaffold ends (potentially truncated)	22.55 %
% of genes from short scaffolds (< 2000 bps)	90.20 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.961 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (82.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.216 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.96% β-sheet: 0.00% Coil/Unstructured: 43.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.128.1.0: automated matches	d3ipia_	3ipi	0.80286
a.128.1.0: automated matches	d4lfea1	4lfe	0.79132
f.20.1.1: Clc chloride channel	d4enea_	4ene	0.7818
a.128.1.0: automated matches	d3npka1	3npk	0.74815
f.41.1.1: Preprotein translocase SecY subunit	d1rh5a_	1rh5	0.74706

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13280	WYL	2.94
PF10544	T5orf172	1.96
PF01593	Amino_oxidase	0.98
PF12796	Ank_2	0.98
PF14281	PDDEXK_4	0.98
PF05050	Methyltransf_21	0.98
PF00338	Ribosomal_S10	0.98
PF00012	HSP70	0.98
PF13455	MUG113	0.98
PF13365	Trypsin_2	0.98
PF08282	Hydrolase_3	0.98
PF13156	Mrr_cat_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0051	Ribosomal protein S10	Translation, ribosomal structure and biogenesis [J]	0.98
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.98
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.98
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.98
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.98
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
All Organisms	root	All Organisms	48.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
cellular organisms	root	All Organisms → cellular organisms	48.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.14 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.22 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.98 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	38.24 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.98 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	30.39 %
unclassified Pelagibacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales	6.86 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.98 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	25.49 %
Pelagibacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	6.86 %
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	0.98 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	0.98 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	18.63 %
Pelagibacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	6.86 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	2.94 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.98 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	0.98 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	18.63 %
Pelagibacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	6.86 %
Candidatus Pelagibacter sp. HTCC7211	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. HTCC7211	2.94 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.98 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	0.98 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001353\|JGI20159J14440_10054844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1473	Open in IMG/M
3300001354\|JGI20155J14468_10062001	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300001974\|GOS2246_10126468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1412	Open in IMG/M
3300001974\|GOS2246_10142744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	1473	Open in IMG/M
3300005398\|Ga0066858_10041713	Not Available	1359	Open in IMG/M
3300005398\|Ga0066858_10220929	Not Available	543	Open in IMG/M
3300005422\|Ga0066829_10241379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300005508\|Ga0066868_10147690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	731	Open in IMG/M
3300005593\|Ga0066837_10214771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	685	Open in IMG/M
3300005603\|Ga0066853_10212442	Not Available	642	Open in IMG/M
3300005912\|Ga0075109_1011125	All Organisms → cellular organisms → Bacteria → Proteobacteria	3986	Open in IMG/M
3300005912\|Ga0075109_1175484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	683	Open in IMG/M
3300006166\|Ga0066836_10461948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	767	Open in IMG/M
3300006166\|Ga0066836_10724683	Not Available	602	Open in IMG/M
3300006900\|Ga0066376_10145060	Not Available	1451	Open in IMG/M
3300006900\|Ga0066376_10157123	Not Available	1384	Open in IMG/M
3300006900\|Ga0066376_10169348	Not Available	1324	Open in IMG/M
3300006900\|Ga0066376_10508679	Not Available	679	Open in IMG/M
3300006902\|Ga0066372_10952997	Not Available	523	Open in IMG/M
3300006916\|Ga0070750_10388128	Not Available	584	Open in IMG/M
3300007512\|Ga0105016_1047133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3136	Open in IMG/M
3300008735\|Ga0115657_1088639	Not Available	1969	Open in IMG/M
3300008954\|Ga0115650_1208198	Not Available	1190	Open in IMG/M
3300009071\|Ga0115566_10064762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2431	Open in IMG/M
3300009071\|Ga0115566_10288555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	971	Open in IMG/M
3300009172\|Ga0114995_10075289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1903	Open in IMG/M
3300009172\|Ga0114995_10098976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1636	Open in IMG/M
3300009173\|Ga0114996_10581955	Not Available	834	Open in IMG/M
3300009173\|Ga0114996_10666425	Not Available	766	Open in IMG/M
3300009193\|Ga0115551_1212798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	865	Open in IMG/M
3300009409\|Ga0114993_10455044	Not Available	956	Open in IMG/M
3300009409\|Ga0114993_10945706	Not Available	615	Open in IMG/M
3300009420\|Ga0114994_10372342	Not Available	947	Open in IMG/M
3300009420\|Ga0114994_10383091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	932	Open in IMG/M
3300009420\|Ga0114994_10896439	Not Available	575	Open in IMG/M
3300009425\|Ga0114997_10195485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1167	Open in IMG/M
3300009425\|Ga0114997_10294533	Not Available	900	Open in IMG/M
3300009425\|Ga0114997_10418310	Not Available	722	Open in IMG/M
3300009437\|Ga0115556_1160438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	826	Open in IMG/M
3300009443\|Ga0115557_1148178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	951	Open in IMG/M
3300009449\|Ga0115558_1423423	Not Available	517	Open in IMG/M
3300009472\|Ga0115554_1066675	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300009476\|Ga0115555_1063623	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300009476\|Ga0115555_1206387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	808	Open in IMG/M
3300009497\|Ga0115569_10394066	Not Available	598	Open in IMG/M
3300009497\|Ga0115569_10415433	Not Available	579	Open in IMG/M
3300009512\|Ga0115003_10399423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	808	Open in IMG/M
3300009550\|Ga0115013_11345322	Not Available	528	Open in IMG/M
3300009593\|Ga0115011_11735639	Not Available	561	Open in IMG/M
3300009703\|Ga0114933_10567459	Not Available	733	Open in IMG/M
3300009703\|Ga0114933_10985798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	533	Open in IMG/M
3300009705\|Ga0115000_10927349	Not Available	532	Open in IMG/M
3300009790\|Ga0115012_12034037	Not Available	510	Open in IMG/M
3300010883\|Ga0133547_11279163	Not Available	1394	Open in IMG/M
3300018036\|Ga0181600_10560681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. HTCC7211	536	Open in IMG/M
3300018428\|Ga0181568_10716934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	780	Open in IMG/M
3300020262\|Ga0211537_1048495	All Organisms → cellular organisms → Bacteria → Proteobacteria	783	Open in IMG/M
3300020262\|Ga0211537_1079555	Not Available	569	Open in IMG/M
3300020361\|Ga0211531_1032121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	1572	Open in IMG/M
3300020361\|Ga0211531_1036353	Not Available	1456	Open in IMG/M
3300020368\|Ga0211674_10163373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	573	Open in IMG/M
3300020391\|Ga0211675_10049981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2019	Open in IMG/M
3300020418\|Ga0211557_10105801	Not Available	1387	Open in IMG/M
3300020423\|Ga0211525_10297271	Not Available	667	Open in IMG/M
3300020455\|Ga0211664_10059415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1813	Open in IMG/M
3300020459\|Ga0211514_10651074	Not Available	514	Open in IMG/M
3300020463\|Ga0211676_10008909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	8822	Open in IMG/M
3300020463\|Ga0211676_10409245	Not Available	740	Open in IMG/M
3300020478\|Ga0211503_10074365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	2050	Open in IMG/M
3300020478\|Ga0211503_10320204	Not Available	844	Open in IMG/M
3300020478\|Ga0211503_10383580	Not Available	756	Open in IMG/M
3300022225\|Ga0187833_10024671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	4603	Open in IMG/M
3300022225\|Ga0187833_10094900	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	1925	Open in IMG/M
3300022225\|Ga0187833_10146867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	1443	Open in IMG/M
3300022225\|Ga0187833_10551060	Not Available	582	Open in IMG/M
3300022227\|Ga0187827_10217441	Not Available	1285	Open in IMG/M
3300022227\|Ga0187827_10336299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	959	Open in IMG/M
3300022837\|Ga0222711_1012041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1316	Open in IMG/M
3300022843\|Ga0222631_1000302	All Organisms → cellular organisms → Bacteria	14888	Open in IMG/M
3300022853\|Ga0222652_1035935	Not Available	755	Open in IMG/M
3300025666\|Ga0209601_1183544	Not Available	565	Open in IMG/M
3300025694\|Ga0209406_1209283	Not Available	579	Open in IMG/M
3300025707\|Ga0209667_1089995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1001	Open in IMG/M
3300025712\|Ga0209305_1111987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. HTCC7211	862	Open in IMG/M
3300025821\|Ga0209600_1117836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. HTCC7211	773	Open in IMG/M
3300025890\|Ga0209631_10143054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1302	Open in IMG/M
3300025890\|Ga0209631_10315107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	752	Open in IMG/M
3300026188\|Ga0208274_1129164	Not Available	560	Open in IMG/M
3300026192\|Ga0207986_1083318	Not Available	712	Open in IMG/M
3300026253\|Ga0208879_1128473	Not Available	1051	Open in IMG/M
3300026263\|Ga0207992_1106729	Not Available	734	Open in IMG/M
3300027687\|Ga0209710_1030964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2636	Open in IMG/M
3300027779\|Ga0209709_10011761	All Organisms → cellular organisms → Bacteria → Proteobacteria	6201	Open in IMG/M
3300027779\|Ga0209709_10249567	Not Available	788	Open in IMG/M
3300027801\|Ga0209091_10208709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	970	Open in IMG/M
3300027838\|Ga0209089_10324157	Not Available	872	Open in IMG/M
3300027844\|Ga0209501_10146566	Not Available	1568	Open in IMG/M
3300027906\|Ga0209404_11056309	Not Available	557	Open in IMG/M
3300031800\|Ga0310122_10195821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	939	Open in IMG/M
3300031800\|Ga0310122_10270558	Not Available	759	Open in IMG/M
3300031801\|Ga0310121_10332483	Not Available	881	Open in IMG/M
3300032820\|Ga0310342_101187212	Not Available	902	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	95.10%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.90%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	50.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified	14.71%
Pelagic	Environmental → Aquatic → Marine → Pelagic	14.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.90%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.90%
Coastal	Environmental → Aquatic → Marine → Coastal	3.92%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.92%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	50.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	14.71%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	14.71%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.96%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.96%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	41.18%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	14.71%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	14.71%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.86%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	3.92%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.94%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.94%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.94%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	2.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.96%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.96%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.96%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300005912	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007512	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300008735	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um	Environmental	Open in IMG/M
3300008954	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020262	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)	Environmental	Open in IMG/M
3300020361	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)	Environmental	Open in IMG/M
3300020368	Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX556049-ERR599093)	Environmental	Open in IMG/M
3300020391	Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)	Environmental	Open in IMG/M
3300020418	Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)	Environmental	Open in IMG/M
3300020423	Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020459	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX555913-ERR599095)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022837	Saline water microbial communities from Ace Lake, Antarctica - #1699	Environmental	Open in IMG/M
3300022843	Saline water microbial communities from Ace Lake, Antarctica - #5	Environmental	Open in IMG/M
3300022853	Saline water microbial communities from Ace Lake, Antarctica - #371	Environmental	Open in IMG/M
3300025666	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025707	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300025821	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026192	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)	Environmental	Open in IMG/M
3300026253	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026263	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20159J14440_100548442	3300001353	Pelagic Marine	MSPFYKTIVPAGAALGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALVKEKK*
JGI20155J14468_100620011	3300001354	Pelagic Marine	VPAGAAIGLGWGVAEGYGIGGIIGLMIAGGFVGAMIALVKEKK*
GOS2246_101264684	3300001974	Marine	MSPFYKTIVPAGAAIGLGWGVAEGYGAAGIIGLMLAGGFVGAMIALIKERK*
GOS2246_101427445	3300001974	Marine	MSPFYKTIVPAGAAIGLGWGLAEGYGIGGIIGLMLAGGFVGAMIALIKEKK*
Ga0066858_100417132	3300005398	Marine	MSTFYKTAVIAGAGLGLGWAVAEGYGAAGIIGLILAGGFVGAMIAMIKERK*
Ga0066858_102209292	3300005398	Marine	MSSFYKAAVIAGAGIGLGWAVAAGYGIGGIIGLAIAGGFVGAMISLIKEKK*
Ga0066829_102413791	3300005422	Marine	FYKSIVIAGAGIGLGWAIAEGYGIAGIIGLMLAGGFVGAMIALIKEKK*
Ga0066868_101476903	3300005508	Marine	YKTIVPAGAAIGLGWAIAEGYGIGGIIGLVLAGGFIGAMIAMIKERK*
Ga0066837_102147713	3300005593	Marine	YKTIVPAGAAIGLGWGVAEGYGAAGIIGLMLAGGFVGAMIALIKERK*
Ga0066853_102124421	3300005603	Marine	MSSFYKTIVPAGAAIGLGWGVAEGYGVAGIIGLMLAGGFVGAMIALIKERK*
Ga0075109_10111259	3300005912	Saline Lake	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMLAGGFIGAMISLLKEKK*
Ga0075109_11754843	3300005912	Saline Lake	MSSFYKTIVPACAAIGLGWGIAEGYSIGAIIGLMLAGGFVGAMIALIKEKK*
Ga0066836_104619482	3300006166	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIVGLTLTGGFIGAMIALIKERK*
Ga0066836_107246833	3300006166	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLALAGGFIGAMIAMIKER*
Ga0066376_101450602	3300006900	Marine	MSSFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMLVGGFVGAMIALIKEKK*
Ga0066376_101571232	3300006900	Marine	MSPFYKTIVPAGAAIGLGWAIAEGYGAAGIIGLMLAGGFVGAMIALIKEKK*
Ga0066376_101693484	3300006900	Marine	MSSFYKTAVIAGAGIGLGWAVAEGYGIGGIIGLALAGGFIGAMIAMIKERK*
Ga0066376_105086792	3300006900	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLTLAGGFIGAMIALIKERK*
Ga0066372_109529972	3300006902	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLALAGGFIGAMIAMIKE
Ga0070750_103881281	3300006916	Aqueous	MSTFYTSIVIAGAGIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALVKEKK*
Ga0105016_10471333	3300007512	Marine	MSPFYKTIVPAGAAIGLGWAIAEGYGIAGIIGLMLAGGFVGAMIALIKERK*
Ga0115657_10886394	3300008735	Marine	MSSFYKTIVPAGAAIGLGWGVAEGYGAAGIIGLMLAGGFVGAMIALIKERK*
Ga0115650_12081982	3300008954	Marine	MSPFYRNIVIAGAAIGLGWAIAEDYGIGGIIGLALAGGFIGAMVAYVKEQILKR*
Ga0115566_100647623	3300009071	Pelagic Marine	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMVAGGFVGAMISLVKEKK*
Ga0115566_102885553	3300009071	Pelagic Marine	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALVKEKK*
Ga0114995_100752893	3300009172	Marine	LSSFYKTTIIAGAGLGLGWAVAEGYGLGGIIGLMLVGGFVGAMIALIKEKK*
Ga0114995_100989762	3300009172	Marine	MSPFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIGLVKEKK*
Ga0114996_105819552	3300009173	Marine	MSSFYKTTVIAGAGLGLGWAVAEGYGLGGIIGLMLVGGFVGAMIALIKEKK*
Ga0114996_106664253	3300009173	Marine	MSPFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLALA
Ga0115551_12127982	3300009193	Pelagic Marine	MSSFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMIAGGFVGAMIALVKEKK*
Ga0114993_104550443	3300009409	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLALAGGFI
Ga0114993_109457062	3300009409	Marine	MSPFYKTIVPAGAAIGLGWAIAEGYGIAGIIGLMLAGGFVGAMIALIKEKK*
Ga0114994_103723423	3300009420	Marine	MSPFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMLVGGFVGAMIGLVKEKK*
Ga0114994_103830913	3300009420	Marine	VSSFYKTTIIVGAGLGLGWAVAEGYGLGGIIGLMLVGGFVGAMIALIKEKK*
Ga0114994_108964392	3300009420	Marine	MSPFYKNIVPAGAAIGLGWAIAEGYGIGGIIGLALAGGFIGAMIAMIKER*
Ga0114997_101954853	3300009425	Marine	VSSFYKTTIIVGAGLGLGWAVAEGYGLGGIIGLMLVGGFVGAIIALIKEKK*
Ga0114997_102945331	3300009425	Marine	MSSFYKTTVIAGAGLGLGWAVAEGYGLGGIIGLMLVGGFIGAMIALIKEKK*
Ga0114997_104183102	3300009425	Marine	MSSFYKTIVPACAAIGLGWGVAEGYGIGGIIGLMLVGGFVGAMIALIKEKK*
Ga0115556_11604383	3300009437	Pelagic Marine	MSTFYTSIVIAGAGIGLGWGVAEGYGIGGIIGLMVAGGFVGAMISLVKEKK*
Ga0115557_11481784	3300009443	Pelagic Marine	MSSFYKTIVPAGAALGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALVKEKK*
Ga0115558_14234232	3300009449	Pelagic Marine	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMLAGGFVGAMISLLKEKK*
Ga0115554_10666751	3300009472	Pelagic Marine	VSSFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMIAGGFVGAMIALVKEKK*
Ga0115555_10636234	3300009476	Pelagic Marine	KSIVIAGAGIGLGWGVAEGYGIGGIIGLMLAGGFVGAMISLLKEKK*
Ga0115555_12063871	3300009476	Pelagic Marine	KTIVPAGAAIGLGWGFAEGYGIGGIIGLMIAGGFVGAMIAFVKEKK*
Ga0115569_103940664	3300009497	Pelagic Marine	LGWGVAEGYGIGGIIGLMVAGGFVGAMISLVKEKK*
Ga0115569_104154332	3300009497	Pelagic Marine	MSTFYTSIVIAGAGIGLGWGVAEGYGIGGIIGLMVAGGFVGAMISLVKEKKMK
Ga0115003_103994232	3300009512	Marine	MSPFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALVKEKK*
Ga0115013_113453222	3300009550	Marine	MSSFYKTVVPAGAAIGFGWALAEGYGIAGMIGLALAGGFLGAVIAYVKEQVL*
Ga0115011_117356392	3300009593	Marine	MSPFYKTIVPAGAAIGLGWAIAEGYGIAGIIGLMLAGGFVGAMIALIKE
Ga0114933_105674591	3300009703	Deep Subsurface	MSQFYKTIVPAGAAIGIGWAFAEGYGIAGIIGLALLGGFIGAMIALIKEKIL*
Ga0114933_109857982	3300009703	Deep Subsurface	MSQTYKTLVIAGAGIGIGWGIAEGYGILGIVGLATAGGFVGAMIALIKEQLLK*
Ga0115000_109273492	3300009705	Marine	MSSFYKTIVPACAAIGLGWGIAEGYSIGAIIGLMLAG
Ga0115012_120340372	3300009790	Marine	MSTFYKSIVIAGASIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALIKEKK*
Ga0133547_112791634	3300010883	Marine	MSTFYKSIVIAGAGIGLGWGVAEGYGIGAIIGLMLAGGFIGAMISLLKEKK*
Ga0181600_105606811	3300018036	Salt Marsh	MTPFYKSIVPIGAAIGLGWAIAEGYGIVGIFGLVIAGGFVGAVIAFVKENILKS
Ga0181568_107169343	3300018428	Salt Marsh	GAAIGLGWAIAEGYGITGIIGLALLGGFVGAMIALIKEKIL
Ga0211537_10484951	3300020262	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIVGLTLAGGFIGAMIALIKERK
Ga0211537_10795552	3300020262	Marine	MSPFYKTIVPAGAAIGLGWAIAEGYGIAGIIGLMLAGGFVGAMIA
Ga0211531_10321213	3300020361	Marine	MSPFYKTIVPAGAAIGLGWAIAEGYGIAGIIGLMLAGGFVGAMIALIKERK
Ga0211531_10363533	3300020361	Marine	MSPFYRNIVVAGAAIGLGWAIAEGYGIGGIIGLALAGGFVGAMVAYVKEQILKK
Ga0211674_101633732	3300020368	Marine	MTSFYKSIVPAGAAIGIGWAIAEGYGILGIIGLALLGGFLGAMIALLKEQVFKK
Ga0211675_100499815	3300020391	Marine	MTSFYKSIVPAGAAIGIGWAIAEGYGIFGIIGLALLGGFLGAMIALLKEQVFKK
Ga0211557_101058013	3300020418	Marine	MSQFYKTIVPAGAAIGIGWAFAEGYGIAGIIGLALLGGFIGAMIALIKEKIL
Ga0211525_102972711	3300020423	Marine	MSPFYKTIVPAGAAIGLGWAIAEGYGIAGIIGLMLAGGFVGAMIAL
Ga0211664_100594153	3300020455	Marine	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALVKEKK
Ga0211514_106510742	3300020459	Marine	MSTFYKSIVIAGASIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALIKEKK
Ga0211676_1000890910	3300020463	Marine	MSQTYKTLVIAGAGIGMGWGIAEGYGILGIIGLALAGGFVGAMIALIKEQLLK
Ga0211676_104092453	3300020463	Marine	MSSFYKSVVPAFAAIGIGWGIAEGYGILGIIGLAIAGGFVGAMIVLIKEQLLK
Ga0211503_100743655	3300020478	Marine	MSPFYRNIVIAGAAIGLGWAIAEDYGIGGIIGLALAGGFIGAMVAYVKEQILKR
Ga0211503_103202042	3300020478	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIIGFMLAGGFVGAMIALIKERK
Ga0211503_103835803	3300020478	Marine	YKTIVPAGAAIGLGWAIAEGYGIGGIIGLMLAGGFVGAMIALIKEKK
Ga0187833_100246719	3300022225	Seawater	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLVLAGGFIGAMIAMIKERK
Ga0187833_100949005	3300022225	Seawater	MSSFYKTAVIAGAGIGLGWAVADGHGIGGIIGLALAGGFIGAMIAMIKERK
Ga0187833_101468675	3300022225	Seawater	MSTFYKTAVIAGAGLGLGWAVAEGYGAAGIIGLILAGGFVGAMIAMIKERK
Ga0187833_105510602	3300022225	Seawater	MSPFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLALAGGFIGAMIAMIKERK
Ga0187827_102174413	3300022227	Seawater	MSSFYKTAVIAGAGIGLGWAVADGHGIGGIIGLALAGGFIGAMIAMIKERKXKKI
Ga0187827_103362992	3300022227	Seawater	MSSFYKAAVIAGAGIGLGWAVAAGYGIGGIIGLAIAGGFVGAMISLIKEKK
Ga0222711_10120413	3300022837	Saline Water	MSSFYKTIVPACAAIGLGWGIAEGYSIGAIIGLMLAGGFVGAMIALIKEKK
Ga0222631_100030217	3300022843	Saline Water	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMLAGGFIGAMISLLKEKK
Ga0222652_10359351	3300022853	Saline Water	MSSFYKTIVPACAAIGLGWGIAEGYSIGAIIGLMLAGGFVGAMIALIKEKKX
Ga0209601_11835442	3300025666	Pelagic Marine	MSSFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMIAGGFVGAMIALVKEKK
Ga0209406_12092831	3300025694	Pelagic Marine	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMVAGGFVGAMISLVKEK
Ga0209667_10899953	3300025707	Marine	MSSFYKTTVIAGAGLGLGWAVAEGYGLGGIIGLMLVGGFVGAMIALIKEKKXKKLNVLN
Ga0209305_11119873	3300025712	Pelagic Marine	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMVAGGFVGAMISLVKEKK
Ga0209600_11178361	3300025821	Pelagic Marine	IIKIMSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMVAGGFVGAMISLVKEKK
Ga0209631_101430542	3300025890	Pelagic Marine	MSPFYKTIVPAGAALGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALVKEKK
Ga0209631_103151071	3300025890	Pelagic Marine	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMLAGGFVG
Ga0208274_11291642	3300026188	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLVLAGGFIGAMIAMIKERKXKKI
Ga0207986_10833182	3300026192	Marine	MSTFYKTAVIAGAGLGLGWAVAEGYGAAGIIGLILAGGFVGAMIAMIKERKXKKI
Ga0208879_11284733	3300026253	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGAAGIIGLMLAGGFVGAMIALIKEKK
Ga0207992_11067292	3300026263	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIVGLTLTGGFIGAMIALIKERK
Ga0209710_10309643	3300027687	Marine	LSSFYKTTIIAGAGLGLGWAVAEGYGLGGIIGLMLVGGFVGAMIALIKEKK
Ga0209709_1001176111	3300027779	Marine	MSPFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMLVGGFVGAMIGLVKEKK
Ga0209709_102495673	3300027779	Marine	VSSFYKTTIIVGAGLGLGWAVAEGYGLGGIIGLMLVGGFVGAMIALIKEKK
Ga0209091_102087093	3300027801	Marine	MSPFYKTIVPAGAAIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALVKEKK
Ga0209089_103241571	3300027838	Marine	MSSFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLALAGGFIGAMIAMIKER
Ga0209501_101465664	3300027844	Marine	MSPFYKTIVPAGAAIGLGWAIAEGYGIGGIIGLALAGGFIGAMIAMIKER
Ga0209404_110563091	3300027906	Marine	MSTFYKSIVIAGAGIGLGWAIAEGYGIAGIIGLMLAGGFVGAMIALI
Ga0310122_101958212	3300031800	Marine	MSPFYKTIVPAGAAIGLGWGVAEGYGIAGIIGLMLAGGFVGAMIALIKERK
Ga0310122_102705581	3300031800	Marine	MSSFYKTAVIAGAGLGLGWAVAAGYGIGGIIGLSLAGGFVGAMIAMIKERK
Ga0310121_103324832	3300031801	Marine	MSTFYKSIVIAGAGIGLGWGVAEGYGVGGIIGLMLAGGFVGAMIALVKERK
Ga0310342_1011872122	3300032820	Seawater	MSTFYKSIVIAGAGIGLGWGVAEGYGIGGIIGLMLAGGFVGAMIALIKERK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101848

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences