Metagenome / Metatranscriptome Family F101924

Basic Information
Family ID	F101924
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	58 residues
Representative Sequence	MERSKSLELHLTEAELETLINAVRGTSDGRFGELEFKLRAAWRRALSQSDYRSVVPDVG
Number of Associated Samples	77
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.59 %
% of genes near scaffold ends (potentially truncated)	26.47 %
% of genes from short scaffolds (< 2000 bps)	90.20 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Unclassified (58.824 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.510 % of family members)
Environment Ontology (ENVO)	Unclassified (27.451 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.608 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.68% β-sheet: 0.00% Coil/Unstructured: 56.32%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00248	Aldo_ket_red	9.80
PF05036	SPOR	1.96
PF04344	CheZ	0.98
PF00072	Response_reg	0.98
PF03737	RraA-like	0.98
PF14347	DUF4399	0.98
PF07969	Amidohydro_3	0.98
PF08774	VRR_NUC	0.98
PF04075	F420H2_quin_red	0.98
PF00571	CBS	0.98
PF02195	ParBc	0.98
PF01738	DLH	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3143	Phosphoaspartate phosphatase CheZ, dephosphorylates CheY~P	Signal transduction mechanisms [T]	1.96
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
All Organisms	root	All Organisms	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
cellular organisms	root	All Organisms → cellular organisms	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.76 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bradyrhizobium sp. S69	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69	3.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig45023	Not Available	911	Open in IMG/M
3300001867\|JGI12627J18819_10451788	Not Available	526	Open in IMG/M
3300002245\|JGIcombinedJ26739_100802451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	821	Open in IMG/M
3300003505\|JGIcombinedJ51221_10020542	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300005332\|Ga0066388_100639181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1681	Open in IMG/M
3300005435\|Ga0070714_101145852	Not Available	758	Open in IMG/M
3300005435\|Ga0070714_101831816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	592	Open in IMG/M
3300005471\|Ga0070698_101446531	Not Available	638	Open in IMG/M
3300005610\|Ga0070763_10873575	Not Available	534	Open in IMG/M
3300006041\|Ga0075023_100078566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69	1099	Open in IMG/M
3300006059\|Ga0075017_100488393	Not Available	933	Open in IMG/M
3300006086\|Ga0075019_10073776	Not Available	1938	Open in IMG/M
3300006086\|Ga0075019_10422821	Not Available	818	Open in IMG/M
3300006086\|Ga0075019_10999362	Not Available	540	Open in IMG/M
3300006102\|Ga0075015_100592304	Not Available	648	Open in IMG/M
3300006163\|Ga0070715_10936255	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300006163\|Ga0070715_11045906	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300006174\|Ga0075014_100504501	Not Available	678	Open in IMG/M
3300006176\|Ga0070765_100529408	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300006176\|Ga0070765_101388166	Not Available	662	Open in IMG/M
3300006893\|Ga0073928_10096185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2495	Open in IMG/M
3300006893\|Ga0073928_11017081	Not Available	564	Open in IMG/M
3300006953\|Ga0074063_13152526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69	841	Open in IMG/M
3300007982\|Ga0102924_1234070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300009522\|Ga0116218_1012177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3808	Open in IMG/M
3300009522\|Ga0116218_1066984	Not Available	1634	Open in IMG/M
3300010046\|Ga0126384_11409098	Not Available	650	Open in IMG/M
3300010046\|Ga0126384_12294297	Not Available	521	Open in IMG/M
3300010047\|Ga0126382_11498432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300010371\|Ga0134125_13052952	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300010373\|Ga0134128_10976300	Not Available	937	Open in IMG/M
3300010375\|Ga0105239_10892975	Not Available	1020	Open in IMG/M
3300010376\|Ga0126381_100460272	Not Available	1786	Open in IMG/M
3300010376\|Ga0126381_101389967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1015	Open in IMG/M
3300010376\|Ga0126381_102477684	Not Available	744	Open in IMG/M
3300010379\|Ga0136449_100344569	All Organisms → cellular organisms → Bacteria	2682	Open in IMG/M
3300010379\|Ga0136449_100664402	All Organisms → cellular organisms → Bacteria → Proteobacteria	1758	Open in IMG/M
3300010379\|Ga0136449_102052371	Not Available	842	Open in IMG/M
3300010379\|Ga0136449_103884113	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300010398\|Ga0126383_11079158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300010398\|Ga0126383_12539126	Not Available	596	Open in IMG/M
3300012201\|Ga0137365_11206614	Not Available	541	Open in IMG/M
3300012951\|Ga0164300_11119626	Not Available	516	Open in IMG/M
3300012957\|Ga0164303_10809705	Not Available	645	Open in IMG/M
3300012961\|Ga0164302_10673083	Not Available	762	Open in IMG/M
3300012961\|Ga0164302_11778319	Not Available	519	Open in IMG/M
3300012986\|Ga0164304_10155252	All Organisms → cellular organisms → Bacteria → Proteobacteria	1446	Open in IMG/M
3300012987\|Ga0164307_10591956	Not Available	854	Open in IMG/M
3300012987\|Ga0164307_11487207	Not Available	572	Open in IMG/M
3300015371\|Ga0132258_11227218	Not Available	1895	Open in IMG/M
3300015372\|Ga0132256_103155657	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300016357\|Ga0182032_10915017	Not Available	746	Open in IMG/M
3300016445\|Ga0182038_11151567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	690	Open in IMG/M
3300017943\|Ga0187819_10451846	Not Available	735	Open in IMG/M
3300017955\|Ga0187817_10815186	Not Available	596	Open in IMG/M
3300017955\|Ga0187817_11031210	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300017970\|Ga0187783_10169341	Not Available	1608	Open in IMG/M
3300017970\|Ga0187783_10550357	Not Available	835	Open in IMG/M
3300017970\|Ga0187783_10630815	Not Available	775	Open in IMG/M
3300018001\|Ga0187815_10299648	Not Available	682	Open in IMG/M
3300020579\|Ga0210407_10687816	Not Available	794	Open in IMG/M
3300020579\|Ga0210407_11234811	Not Available	561	Open in IMG/M
3300020580\|Ga0210403_10437779	Not Available	1066	Open in IMG/M
3300020582\|Ga0210395_11073376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300020583\|Ga0210401_10089535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2895	Open in IMG/M
3300021168\|Ga0210406_11123808	Not Available	577	Open in IMG/M
3300021170\|Ga0210400_11069496	Not Available	654	Open in IMG/M
3300021170\|Ga0210400_11086282	Not Available	648	Open in IMG/M
3300021171\|Ga0210405_10493138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	960	Open in IMG/M
3300021178\|Ga0210408_10975872	Not Available	657	Open in IMG/M
3300021180\|Ga0210396_10113495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69	2446	Open in IMG/M
3300021403\|Ga0210397_10453905	Not Available	965	Open in IMG/M
3300021404\|Ga0210389_10712757	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300021405\|Ga0210387_10293067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69	1430	Open in IMG/M
3300021405\|Ga0210387_10526592	Not Available	1051	Open in IMG/M
3300021407\|Ga0210383_10227599	All Organisms → cellular organisms → Bacteria → Proteobacteria	1598	Open in IMG/M
3300021420\|Ga0210394_11038672	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300021432\|Ga0210384_11748576	Not Available	527	Open in IMG/M
3300021474\|Ga0210390_11186614	Not Available	617	Open in IMG/M
3300021478\|Ga0210402_10373877	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300021479\|Ga0210410_10341248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1343	Open in IMG/M
3300021559\|Ga0210409_11191099	Not Available	637	Open in IMG/M
3300021560\|Ga0126371_13070077	Not Available	565	Open in IMG/M
3300022557\|Ga0212123_10031245	All Organisms → cellular organisms → Bacteria	5457	Open in IMG/M
3300025320\|Ga0209171_10024772	All Organisms → cellular organisms → Bacteria	4574	Open in IMG/M
3300027047\|Ga0208730_1009749	Not Available	1019	Open in IMG/M
3300027604\|Ga0208324_1016258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2345	Open in IMG/M
3300027895\|Ga0209624_10816599	Not Available	612	Open in IMG/M
3300027898\|Ga0209067_10973987	Not Available	501	Open in IMG/M
3300027908\|Ga0209006_10243130	Not Available	1551	Open in IMG/M
3300029636\|Ga0222749_10100013	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300029636\|Ga0222749_10674097	Not Available	566	Open in IMG/M
3300030494\|Ga0310037_10134711	Not Available	1128	Open in IMG/M
3300030707\|Ga0310038_10181667	Not Available	1018	Open in IMG/M
3300031231\|Ga0170824_101320741	Not Available	500	Open in IMG/M
3300031708\|Ga0310686_116748167	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300031718\|Ga0307474_10296234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300031718\|Ga0307474_11453089	Not Available	540	Open in IMG/M
3300031890\|Ga0306925_11672342	Not Available	616	Open in IMG/M
3300031946\|Ga0310910_10898558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	695	Open in IMG/M
3300032160\|Ga0311301_10176049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3758	Open in IMG/M
3300032160\|Ga0311301_10523861	All Organisms → cellular organisms → Bacteria → Proteobacteria	1746	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.08%
Host-Associated	Host-Associated	2.94%
Engineered	Engineered	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.41%
Aquatic	Environmental → Aquatic	16.67%
Plants	Host-Associated → Plants	2.94%
Modeled	Engineered → Modeled	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.41%
Sediment	Environmental → Aquatic → Sediment	7.84%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.90%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.76%
Loam	Environmental → Terrestrial → Soil → Loam	14.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.84%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.84%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0023.00003340	2166559005	Simulated	MERSKSLELHLTEAELETLINAIRAYNGRLAELEFKLRAAWRRSLSQSDYGSVIADVG
JGI12627J18819_104517881	3300001867	Forest Soil	MERSKSLELHLTEAELETLINAVRTYNGRLAELEFKLRAAWRRSLSQSDYGSVIADVG*
JGIcombinedJ26739_1008024512	3300002245	Forest Soil	MERSKSLELHLTEAELETLINAVHSTSDGRFGELEFKLRAAWRRALYQSDYRSVVPDVG*
JGIcombinedJ51221_100205424	3300003505	Forest Soil	MESSKSLELQLTEAEIETLISAVRSTSNGRFADLEFKLRTAWRRAPSQSDYRSAIPDLG*
Ga0066388_1006391813	3300005332	Tropical Forest Soil	MEASKRLELQLTEPELETLISAVRSTPNGRFTELEFKLRAAWRRALYHADVG*
Ga0070714_1011458521	3300005435	Agricultural Soil	MDGSKSLELQLTEAELESLVNAVRSTSNGRFPELEFKLRTAWRRALSQSDYRSVIPDVG*
Ga0070714_1018318162	3300005435	Agricultural Soil	MERSKSLELHLTEAELETLINAIRAYNGRLAELEFKLRAAWRRSLSQSDYGSVIADVG*
Ga0070698_1014465311	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MARALLSRLIRGRKCTKKHRMERSKNLELHLAEAELETLVRAVRSDAELEFKLRAACRRALSQSDYRSAIPDVG*
Ga0070763_108735751	3300005610	Soil	GMEGHTSLELTLTEAELEMLISAVRGTSDGRFPELEFKLRAAWRRALPQSN*
Ga0075023_1000785661	3300006041	Watersheds	MERSKNLELHLTEAELETLVNAVRNTSDGRFAELEFKLRAAWRRALSQSDYRSAILTLD*
Ga0075017_1004883931	3300006059	Watersheds	MEGHTSLELTLTEAELEMLISAVRGTSGGRFPELEFKLRAAWRRALPQSN*
Ga0075019_100737762	3300006086	Watersheds	MERSKSLELHLTGAELETLINAIRAYNGRLAELEFKLRAAWRRSLSQSLLMLVDRVAG*
Ga0075019_104228212	3300006086	Watersheds	MERSKSLELQLTEAEFETFINAVCSTPGGRFAELEFKLRAAWRSAPSQSDYRSAIPDVG*
Ga0075019_109993622	3300006086	Watersheds	MEGHTSLELTLTEAELEMLISAVRGTSGGRFPELEFKLRAAWRRALPQSNYSSTIADVG*
Ga0075015_1005923042	3300006102	Watersheds	MERSKSLELQLTEAEFETFINAVCGTPGGRFAELEFKLRAAWRRAPSQSDYRSAIPDVG*
Ga0070715_109362551	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MEGNKTLELHLTEAELETLISAVRSTSGGRFPELEFKLRAAWGRALPQFDYSSTTADVG*
Ga0070715_110459062	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	EAELETLINAVRRTSDGRFAELEFKLRAAWRRALPRSDYSSITPDVG*
Ga0075014_1005045012	3300006174	Watersheds	MEKSLELHLTEAEFETLINAVCSTPGGRFAELEFKLRAAWRRAPSQSDYRSAIPDVG*
Ga0070765_1005294083	3300006176	Soil	MERNKSLELHLTEAELETLINAIRAYNGRLAELEFKLRAAWRRSLSQSDYGSVIADVG*
Ga0070765_1013881662	3300006176	Soil	MEGHTSLELTLTEAELKMLISAVRGTSGGRFPELEFKLRAAWRRALPQSNYSSTIADVG*
Ga0073928_100961857	3300006893	Iron-Sulfur Acid Spring	MQRERMERSKSLELHLTEAELETLINAVHSTSDGRFGELEFKLRAAWRRALSQSDYRSVVPDVG*
Ga0073928_110170811	3300006893	Iron-Sulfur Acid Spring	MERSKSLELHLTEVELETLINAVHKTSNGGFAELELKLRAAWRSGLPQSDYRSV
Ga0074063_131525261	3300006953	Soil	MERSKNLELHLTEAELETLVNAVRNTSDGRFAELEFKLRAAWRRALSQSDYRSAI
Ga0102924_12340701	3300007982	Iron-Sulfur Acid Spring	MERSKSLELRLTEAELETLINAVRSTSDGRFGELEFKLRAAWRRALSQSDYRSIVPDVG*
Ga0116218_10121773	3300009522	Peatlands Soil	MESSKLLELRLTEVELETLIGAVRKTPDGGFAELEFKLRAAWRSGLPQSDYRSVTPDVG*
Ga0116218_10669842	3300009522	Peatlands Soil	MERSKSLELHLTEAELETLINAVRGTSDGRFGELEFKLRAAWRRALSQSDYRSVVPDVG*
Ga0126384_114090981	3300010046	Tropical Forest Soil	MERSKRLELHLTEAELETLINAVRNYNGRLAELEFKLRTAWKSGLPQSDYRSVIPDVG*
Ga0126384_122942972	3300010046	Tropical Forest Soil	MTYTRKKMQKKVRMERAKSLELQLTEAELETLIKAVRSTSNGRFDELEFKLRAAWRKALSQSDFRSAIPDVG*
Ga0126382_114984322	3300010047	Tropical Forest Soil	MERSKSLELRLTEAELETLINAVRTYNGRLAELEFKLRAAWRRSLSQSDYGSVIADVG*
Ga0134125_130529522	3300010371	Terrestrial Soil	EGNKSLELHLTEAELETLISAVRSSSGGRVPELEFKLRAAWRRALPQSDHSSITADVG*
Ga0134128_109763001	3300010373	Terrestrial Soil	MDGSKSLELQLTEAELESLVNAVRSTSNGRFPELEFKLRAAWRRALSQSDYRSVIPDVG*
Ga0105239_108929751	3300010375	Corn Rhizosphere	MLLYQDSHVSDKNQKVPMEGSKSLELQLTEAELETLISAVRSTPIGRFRDLEFKLRAAWRRALPKSDYRSATPDVG*
Ga0126381_1004602723	3300010376	Tropical Forest Soil	MERSKSLELHLTEAELETLINAVRSTSGRPAELEFRLRAAWRRGLPQSDYRSVIPDVG*
Ga0126381_1013899672	3300010376	Tropical Forest Soil	MERSKRLELHLTEAELETLITAVHNTYNGRLAELEFKLRTAWRSGLPQSDYRSVIPDVG*
Ga0126381_1024776842	3300010376	Tropical Forest Soil	MERAKSLELQLTEAEFETLIKAVRSTSNGRFDELEFKLRAAWRKAVSQSDFRSAIPDVG*
Ga0136449_1003445695	3300010379	Peatlands Soil	MERSKSLELQLTEAELETLINAVRSSSNGRFAELEFKLRAAWRGALSHPDYRSVIPDVG*
Ga0136449_1006644022	3300010379	Peatlands Soil	MEGNKSLEPHLTEAELETLISAGRSSSGGRFPELEFKLRAAWRRALPQSGHSSTTADVG*
Ga0136449_1020523712	3300010379	Peatlands Soil	MEGSKSLELHLTEAELEMLINAVRGTSGGRFAELEFKLRAAWRRALSQSDYRSATPDVG*
Ga0136449_1038841131	3300010379	Peatlands Soil	LELQLTEAELETLINAVRTTSNGCFAELEFKLRAAWRRALSQSDYRSVIPDVG*
Ga0126383_110791581	3300010398	Tropical Forest Soil	MEASKRLELQLTEPELETLISAVRSTPNGRFTELEFKLRAAWRRAFYQSDYRSMVADVG*
Ga0126383_125391261	3300010398	Tropical Forest Soil	MTYTRKKMQKKVRMERAKSLELQLTEAELETLIKAVRSTSNGRFDELEFKLRAAWRKAVSQSDFRSAIPDVG*
Ga0137365_112066141	3300012201	Vadose Zone Soil	MEGHKSLELTLTEAELEMLISAVRSTSGGRVPELEFKLRAAWRRALSQSDYSSTTADVG*
Ga0164300_111196262	3300012951	Soil	MERRKSLELHLTEAELETLINAVRSASDGRLADLEFKLRAAWRKAPSQSDYRS
Ga0164303_108097051	3300012957	Soil	MLKVRDGRNKSLELHLTEAELEALISAVRSTSGGRLPELEFKLRAAWRRALPQSDYPSTTIDVG*
Ga0164302_106730831	3300012961	Soil	KSLELHLTEAELETLINAVRSASDGRLADLEFKLRAAWRKAPSQSDYRSAIPDVG*
Ga0164302_117783191	3300012961	Soil	MESSKSLELQLTEAGLETLINAVRSAPNGRFAELEFKLRGAWRRALSQSDYRSVIPDVG*
Ga0164304_101552522	3300012986	Soil	MEGNKSLELHLTEAELEALISAVRSTSGGRLPELEFKLRAAWGRALPQFDYSSTTADVG*
Ga0164307_105919561	3300012987	Soil	MERSKSLELHLTEAELETLINAIRAYNGRLAELEFKLRAAWRKAPSQSDYRSAIPDVG*
Ga0164307_114872071	3300012987	Soil	MEGNKTLELHLTEAELETLISAVRSTSGGRFPELEFKLRAACGRALPQFDY
Ga0132258_112272181	3300015371	Arabidopsis Rhizosphere	MDGSKSLELQLTEAELESLVNAVRSTSNGRFPELEFKLRAAWRRALSQSDYRSLIPDVG*
Ga0132256_1031556572	3300015372	Arabidopsis Rhizosphere	MERSKSLELHITEAELETLINAVRTYNGRLAELEFKLRAAWRRSLSQSDYGSVIADVG*
Ga0182032_109150173	3300016357	Soil	AELETLINAVRNTSGGLTELESRLRAAWRRGLTQSDYRSVIPDVG
Ga0182038_111515672	3300016445	Soil	MEGSKSLELHLTETELETLINAIRRTPDGRYAGLEFKLREAWRRALFQSDYRSAFPDVG
Ga0187819_104518462	3300017943	Freshwater Sediment	MERSKSLELQLTEAELETLINAVRTTSNGCFAELEFKLRAAWRRALSQSDYRSVIPDVG
Ga0187817_108151861	3300017955	Freshwater Sediment	MEASKSLELHLTEAEFETLINAVRSTSCGRFAELEFKLRAAWRRALSQSDYR
Ga0187817_110312101	3300017955	Freshwater Sediment	TEAELETLVRAVRSDGRFAELEFKLRAAWRRALSQSDYRSAIPNVG
Ga0187783_101693412	3300017970	Tropical Peatland	MEKSKSLELHLTEAELQTLINAVRSTSGGFAELEFKLRAAWRRGLPQSDYRTVTPDVG
Ga0187783_105503571	3300017970	Tropical Peatland	MEGIKSLEVHLTESELEALISAVRNISGCRLHELEFKLRAAWRRALPQSDHSSTTADVG
Ga0187783_106308151	3300017970	Tropical Peatland	MLFWSSTRGRKKREVRGGRSKSLELHLTEAELETLINAVRSNYNGRLAELEFKPRAAWRGGLPQSDYSSVNPDVG
Ga0187815_102996481	3300018001	Freshwater Sediment	MERSKSLELQLTEAELETLINAVRSASNGRFAELEFKLRAAWRGALSQPDYRSVIPDVG
Ga0210407_106878162	3300020579	Soil	MERRKSLELHLTEAELETLINAVRSASDGRLADLEFKLRAAWRKAPSQSDYRSAIPDVG
Ga0210407_112348111	3300020579	Soil	MEGHKSLELTLTEAELETLISAVRSTSSGRFPELEFKLRAAWRRALPQSDYSSTTADVG
Ga0210403_104377792	3300020580	Soil	LELHLTEAELETLINAVRSASDGRLADLEFKLRAAWRKAPSQSDYRSAIPDVG
Ga0210395_110733762	3300020582	Soil	MEGNKSLELHLTETELETLISAVRSTSGGRFRELEFKLRAAWRRALPQFDYLSITPDVG
Ga0210401_100895356	3300020583	Soil	MEGNKSLELHLTETELETLISAVRSTSGGRFRELEFKLRTAWRRALPQFDYPSITADVG
Ga0210406_111238081	3300021168	Soil	MEKRKSLELHLTEAELETLINAVRSASDGRLADLEFKLRAAWRKAPSQ
Ga0210400_110694962	3300021170	Soil	MESSKSLELQLTEAEIETLISAVRSTSNGRFADLEFKLRTAWRRAPSQSDYR
Ga0210400_110862822	3300021170	Soil	MEGSKSLELHLTEAELETLINAVRRTSDGRFAELEFKLRAAWRRALPRSDYSS
Ga0210405_104931382	3300021171	Soil	MERSKSLELHLTEAELETLINAVRTYNGRLAELEFKLRAAWRRSLSQSDYGAVIADVG
Ga0210408_109758721	3300021178	Soil	MEGTKTLELHLTEAELETLISAVRSTSGGRFPELEFKLRAACGRALPQFDYSSTTADVG
Ga0210396_101134955	3300021180	Soil	MERSKNLELHLTEAELETLVNAVRNTSDGRFAELEFKLRAAWRRALSQSDYRSAILTLVESVQ
Ga0210397_104539053	3300021403	Soil	MESSKSLELQLTEAEIETLISAVRSTSNGRFADLEFKLRTAWRRAPSQSDYRSAI
Ga0210389_107127572	3300021404	Soil	MEGSKSLELHLTEAELETLINAVRRTSDGRFAELEFKLRAAWRRALPRSDYSSITPDVG
Ga0210387_102930672	3300021405	Soil	MERSKNLELHLTEAELETLVNAVRNTSDGRFAELEFKLRAAWRRALSQSDYRSAILTLVESVQVDNFFMVP
Ga0210387_105265922	3300021405	Soil	MEGNKSLELHLTETELETFISAVRSTSGGRFRELEFKLRAAWRRALPQFDYPSITPDVG
Ga0210383_102275992	3300021407	Soil	MESSKSLELQLTEAEIETLISAVRSTSNGRFADLEFKLRTAWRRAPSQSDYRSAIPDLG
Ga0210394_110386722	3300021420	Soil	MEGNKSLELHLTEAELEALISAVRSTSGGRLPELEFKLRAAWRRALPQSDYPSTTIDVG
Ga0210384_117485762	3300021432	Soil	MERRKSLELHLTEAELETLINAVRSASDGRLADLEFKLRAAWRKAPSQSDY
Ga0210390_111866141	3300021474	Soil	MVRMEGNKSLELHLTETELEALISAVRSASGGTVRELEFKLRAAWRRALPQFDYPSIIPDVG
Ga0210402_103738771	3300021478	Soil	MERSKSLELHLTEAELETLINAIRAYNGRLAELEFKLHAAWRRSLSTMVRSLLTLVDRVA
Ga0210410_103412484	3300021479	Soil	LELHLTETELETLISAVRSTSGGRFRELEFKLRAAWRRALPQFDYLSITPDVG
Ga0210409_111910991	3300021559	Soil	MERSKSLELLLTEAELEMLINAVRTTSGGFAELEFKLRAAWRRALPRSDYSSITPDVG
Ga0126371_130700771	3300021560	Tropical Forest Soil	MERSKSLELHLTEAELETLINAVRNYNGRLAELEFKLRAAWRKSLSQSDYGSVIADVG
Ga0212123_100312458	3300022557	Iron-Sulfur Acid Spring	MQRERMERSKSLELHLTEAELETLINAVHSTSDGRFGELEFKLRAAWRRALSQSDYRSVVPDVG
Ga0209171_100247727	3300025320	Iron-Sulfur Acid Spring	MTYTRRKMQRERMERSKSLELHLTEAELETLINAVHSTSDGRFGELEFKLRAAWRRALSQSDYRSVVPDVG
Ga0208730_10097491	3300027047	Forest Soil	MERSKSLELHLTEAELETLVNAVRNTSDGRFAELEFKLRAAWRRALSQSDYRSAILTLVESVQVDNFLWCRKALR
Ga0208324_10162581	3300027604	Peatlands Soil	MESSKLLELRLTEVELETLIGAVRKTPDGGFAELEFKLRAAWRSGLPQSDYRSVTPDVG
Ga0209624_108165991	3300027895	Forest Soil	MEGNKSLELHLTETELEALISAVRSANGGRVRELEFKLRAAWRRALPQFDYPSIIPDVG
Ga0209067_109739871	3300027898	Watersheds	MEGHTSLELTLTEAELEMLISAVRGTSGGRFPELEFKLRAAWRRALPQSNYSSTIADVG
Ga0209006_102431301	3300027908	Forest Soil	MESSKSLELQLTEAEIETLISAVRSTSNGRFADLEFKLRTAWRRAPSLSDYRSAIPDLG
Ga0222749_101000133	3300029636	Soil	MERSKNLELHLTEAELETLINAIRAYNGRLAELEFKLRAAWRRSLSQSDYGSVIADVG
Ga0222749_106740972	3300029636	Soil	LELHLTEAELETLINAVRSASDGRLADLEFKLRAAWRKAPSQSDYRSAI
Ga0310037_101347111	3300030494	Peatlands Soil	MESSKLLELRLTEVELETLIGAVRKTPDGGFAELEFKLRAAWRSGLPQSDYR
Ga0310038_101816672	3300030707	Peatlands Soil	MQRERMERSKSLELHLTEAELETLINAVRGTSDGRFGELEFKLRAAWRRALSQSDYRSVVPDVG
Ga0170824_1013207411	3300031231	Forest Soil	MTPKPKAMERSKSLELHLTEAELETLINAVCSTPGGRFAELEFKLRAAWRRAPSQSDYRSAIPDVG
Ga0310686_1167481671	3300031708	Soil	LFLVVARRSSREAELETLINAIRAYNGRLAELEFKLRAAWRRSLSQSDYGSVIADVG
Ga0307474_102962343	3300031718	Hardwood Forest Soil	MERSKSLELHLTEAELETLINAVRTYNGRLAELEFKLRVAWRRSLSQSDYGSVIADVG
Ga0307474_114530891	3300031718	Hardwood Forest Soil	MERSKSLELQLTEAEFETFINAVCSTPGGRFAELEFKLRAAWRSAPSQSDYRSAIPDVG
Ga0306925_116723422	3300031890	Soil	MEGSRSLELHLTEAELETLINAVRSTPDGRYAGLEFKLREAWRRALFQSDYRSAF
Ga0310910_108985582	3300031946	Soil	MEGSKSLELHLTEAELETLINAVRSTSGGRYAELEFKLRAAWRRALSQFDHRSAIPDVG
Ga0311301_101760494	3300032160	Peatlands Soil	MEGHTSLELTLTEAELEMLISAVRGTSGGRFPELEFKLRAAWRRALPQSN
Ga0311301_105238612	3300032160	Peatlands Soil	MEGNKSLEPHLTEAELETLISAGRSSSGGRFPELEFKLRAAWRRALPQSGHSSTTADVG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101924

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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