Metagenome Family F101984

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101984
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	75 residues
Representative Sequence	MKKTLYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
Number of Associated Samples	85
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.80 %
% of genes near scaffold ends (potentially truncated)	34.31 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.314 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (30.392 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.961 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.58% β-sheet: 24.68% Coil/Unstructured: 59.74%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF11638	DnaA_N	27.45
PF02635	DrsE	23.53
PF13393	tRNA-synt_His	6.86
PF02511	Thy1	1.96
PF00712	DNA_pol3_beta	1.96
PF02768	DNA_pol3_beta_3	1.96
PF08704	GCD14	0.98
PF02518	HATPase_c	0.98
PF02767	DNA_pol3_beta_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	4.90
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	1.96
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	77.45 %
Unclassified	root	N/A	15.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.90 %

Name	Rank	Taxonomy	Distribution
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	77.45 %
Unclassified	root	N/A	15.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.90 %

Name	Rank	Taxonomy	Distribution
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	77.45 %
Unclassified	root	N/A	15.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.90 %

Name	Rank	Taxonomy	Distribution
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	77.45 %
Unclassified	root	N/A	15.69 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	4.90 %

Name	Rank	Taxonomy	Distribution
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	69.61 %
Unclassified	root	N/A	15.69 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	4.90 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	33.33 %
Unclassified	root	N/A	15.69 %
Nitrospira defluvii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	11.76 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	6.86 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	4.90 %
Nitrospira japonica	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	2.94 %

Name	Rank	Taxonomy	Distribution
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	21.57 %
Unclassified	root	N/A	15.69 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	11.76 %
Nitrospira defluvii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	11.76 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	6.86 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	4.90 %
Nitrospira japonica	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	2.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886006\|SwRhRL3b_contig_164037	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	822	Open in IMG/M
2170459018\|G1P06HT01C397E	Not Available	605	Open in IMG/M
2228664021\|ICCgaii200_c1056513	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	3912	Open in IMG/M
3300000559\|F14TC_100005397	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	2898	Open in IMG/M
3300000559\|F14TC_100900180	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1170	Open in IMG/M
3300001431\|F14TB_101640972	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	791	Open in IMG/M
3300001990\|JGI24737J22298_10055960	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1192	Open in IMG/M
3300003267\|soilL1_10077893	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	2340	Open in IMG/M
3300003321\|soilH1_10145275	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	2264	Open in IMG/M
3300003347\|JGI26128J50194_1005628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	822	Open in IMG/M
3300003993\|Ga0055468_10173343	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	653	Open in IMG/M
3300003996\|Ga0055467_10088197	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	865	Open in IMG/M
3300004156\|Ga0062589_102291813	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	555	Open in IMG/M
3300004463\|Ga0063356_100441339	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	1694	Open in IMG/M
3300005277\|Ga0065716_1011859	Not Available	618	Open in IMG/M
3300005289\|Ga0065704_10007099	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3298	Open in IMG/M
3300005289\|Ga0065704_10825587	Not Available	517	Open in IMG/M
3300005290\|Ga0065712_10364356	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	771	Open in IMG/M
3300005290\|Ga0065712_10386908	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	746	Open in IMG/M
3300005290\|Ga0065712_10499105	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	650	Open in IMG/M
3300005290\|Ga0065712_10598595	Not Available	568	Open in IMG/M
3300005329\|Ga0070683_102192218	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	530	Open in IMG/M
3300005339\|Ga0070660_100042500	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	3469	Open in IMG/M
3300005355\|Ga0070671_101200934	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005365\|Ga0070688_101571266	Not Available	536	Open in IMG/M
3300005466\|Ga0070685_10270316	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1134	Open in IMG/M
3300005543\|Ga0070672_100254611	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1479	Open in IMG/M
3300005719\|Ga0068861_100696774	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	943	Open in IMG/M
3300005764\|Ga0066903_102313965	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1038	Open in IMG/M
3300006163\|Ga0070715_10092088	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1397	Open in IMG/M
3300006173\|Ga0070716_100132553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1577	Open in IMG/M
3300006845\|Ga0075421_100034254	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	6427	Open in IMG/M
3300006845\|Ga0075421_100173761	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	2682	Open in IMG/M
3300006845\|Ga0075421_100447854	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	1543	Open in IMG/M
3300006853\|Ga0075420_100005365	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	11273	Open in IMG/M
3300006871\|Ga0075434_100227519	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	1884	Open in IMG/M
3300006880\|Ga0075429_100466935	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1106	Open in IMG/M
3300006880\|Ga0075429_100670656	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	908	Open in IMG/M
3300006903\|Ga0075426_10160904	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	1621	Open in IMG/M
3300006904\|Ga0075424_100560253	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	1220	Open in IMG/M
3300009100\|Ga0075418_11128453	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	849	Open in IMG/M
3300009147\|Ga0114129_10094734	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	4135	Open in IMG/M
3300009147\|Ga0114129_10332330	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	2017	Open in IMG/M
3300009156\|Ga0111538_12947692	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	595	Open in IMG/M
3300009157\|Ga0105092_10018646	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	3652	Open in IMG/M
3300009162\|Ga0075423_11162710	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	823	Open in IMG/M
3300010403\|Ga0134123_12061984	Not Available	630	Open in IMG/M
3300012900\|Ga0157292_10277577	Not Available	593	Open in IMG/M
3300012906\|Ga0157295_10006962	Not Available	1868	Open in IMG/M
3300012910\|Ga0157308_10000440	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	7190	Open in IMG/M
3300012951\|Ga0164300_10170591	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1039	Open in IMG/M
3300012951\|Ga0164300_10204085	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	971	Open in IMG/M
3300012955\|Ga0164298_10226253	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1112	Open in IMG/M
3300012955\|Ga0164298_10227158	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1110	Open in IMG/M
3300012957\|Ga0164303_10637452	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	708	Open in IMG/M
3300012958\|Ga0164299_10288627	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1002	Open in IMG/M
3300012958\|Ga0164299_10585901	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	760	Open in IMG/M
3300012958\|Ga0164299_10717910	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	701	Open in IMG/M
3300012961\|Ga0164302_11391661	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	572	Open in IMG/M
3300012984\|Ga0164309_10027970	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	3056	Open in IMG/M
3300012987\|Ga0164307_10802674	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	748	Open in IMG/M
3300012988\|Ga0164306_11609606	Not Available	560	Open in IMG/M
3300013096\|Ga0157307_1009520	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1486	Open in IMG/M
3300013306\|Ga0163162_10411714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1484	Open in IMG/M
3300014254\|Ga0075312_1003311	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2510	Open in IMG/M
3300014259\|Ga0075311_1122448	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	574	Open in IMG/M
3300014268\|Ga0075309_1007486	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2183	Open in IMG/M
3300014271\|Ga0075326_1168791	Not Available	646	Open in IMG/M
3300014310\|Ga0075331_1134071	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	597	Open in IMG/M
3300014968\|Ga0157379_12647579	Not Available	503	Open in IMG/M
3300015371\|Ga0132258_10200399	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	4841	Open in IMG/M
3300015371\|Ga0132258_10750621	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2458	Open in IMG/M
3300015371\|Ga0132258_11642986	Not Available	1621	Open in IMG/M
3300015371\|Ga0132258_12796933	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1215	Open in IMG/M
3300015372\|Ga0132256_100363686	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1543	Open in IMG/M
3300015373\|Ga0132257_100390444	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1690	Open in IMG/M
3300015374\|Ga0132255_104303995	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	604	Open in IMG/M
3300018067\|Ga0184611_1063311	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1249	Open in IMG/M
3300019362\|Ga0173479_10016648	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2018	Open in IMG/M
3300022737\|Ga0247747_1008300	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1032	Open in IMG/M
3300023067\|Ga0247743_1003105	Not Available	1878	Open in IMG/M
3300023168\|Ga0247748_1069211	Not Available	554	Open in IMG/M
3300023260\|Ga0247798_1004210	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1686	Open in IMG/M
3300025792\|Ga0210143_1074734	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	614	Open in IMG/M
3300025904\|Ga0207647_10051019	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2559	Open in IMG/M
3300025912\|Ga0207707_10477197	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1065	Open in IMG/M
3300025921\|Ga0207652_10301137	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1447	Open in IMG/M
3300025939\|Ga0207665_10047619	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2875	Open in IMG/M
3300025944\|Ga0207661_11760465	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	565	Open in IMG/M
3300026062\|Ga0208654_1008926	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1270	Open in IMG/M
3300026090\|Ga0208912_1050439	Not Available	618	Open in IMG/M
3300027252\|Ga0209973_1003379	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300027424\|Ga0209984_1000100	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	9785	Open in IMG/M
3300027552\|Ga0209982_1000408	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	5270	Open in IMG/M
3300027909\|Ga0209382_12240415	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	515	Open in IMG/M
3300028381\|Ga0268264_10988480	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	848	Open in IMG/M
3300031538\|Ga0310888_10021741	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira japonica	2701	Open in IMG/M
3300031562\|Ga0310886_10144671	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1244	Open in IMG/M
3300031562\|Ga0310886_10505198	Not Available	730	Open in IMG/M
3300032002\|Ga0307416_100176492	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1997	Open in IMG/M
3300032013\|Ga0310906_10086454	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1678	Open in IMG/M
3300033412\|Ga0310810_11230948	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	601	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.88%
Host-Associated	Host-Associated	43.14%
Engineered	Engineered	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.98%
Plants	Host-Associated → Plants	43.14%
Aquatic	Environmental → Aquatic	4.90%
Solid Waste	Engineered → Solid Waste	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.59%
Marine	Environmental → Aquatic → Marine	2.94%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Sediment	Environmental → Aquatic → Sediment	0.98%
Grass	Engineered → Solid Waste → Grass	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.67%
Loam	Environmental → Terrestrial → Soil → Loam	12.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	12.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Composting	Engineered → Solid Waste → Grass → Composting	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	12.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.71%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	6.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886006	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
2170459018	Litter degradation MG2	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003347	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM	Host-Associated	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026062	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026090	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL3b_0318.00001580	2162886006	Switchgrass Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
2MG_01393650	2170459018	Switchgrass, Maize And Mischanthus Litter	MKKTLYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRMFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
ICCgaii200_10565132	2228664021	Soil	MKKTLYLLRKPIDQIXSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
F14TC_1000053972	3300000559	Soil	MKKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMFSYEGGAVFSLTNGEVENGLTYDGLIRKIFECDHTVVI*
F14TC_1009001803	3300000559	Soil	MKKILYLLRKPVERIDPALFLPEQSQGDVVLLEESGGRLFPYEGGSMFLVTDGESQHGLTYDGLVRKIFECDHTIVI*
F14TB_1016409722	3300001431	Soil	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFECDHTVVI*
JGI24737J22298_100559602	3300001990	Corn Rhizosphere	MKKTLYLLRKPIDQIXSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
soilL1_100778932	3300003267	Sugarcane Root And Bulk Soil	MKKTLYLIRKPVDQIDPALFLPAESQGDVVLLEGSGGRRFPYSGGQIFSLIASGSSHDLTYEELVKKIFDCDHTVVI*
soilH1_101452754	3300003321	Sugarcane Root And Bulk Soil	MKKTLYLLRKPVEQVDPALFLREKSQGDVVLLQESGGRLFPFPGGSVFSITDVEAEHALTYDGLVTKIFECDHTLVI*
JGI26128J50194_10056282	3300003347	Arabidopsis Thaliana Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0055468_101733432	3300003993	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVDGVGGRKFPYAGGTVFTLQGGEADHVLTYDDLVKKIFECDHTVVI*
Ga0055467_100881973	3300003996	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVDGVGGRKFPYAGGTVFTLQGGEADHVLTYDDLV
Ga0062589_1022918131	3300004156	Soil	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESGGRIFPYEGGVVFSLRNDEVDDGLTYDDLVKK
Ga0063356_1004413393	3300004463	Arabidopsis Thaliana Rhizosphere	MKKTLYLLRKPPDRINPAVFHPSESQGDVVLLEESGGRMFPYTGGIVFSLRDDTADDALTYDDLVKKIFEYDHTVVI*
Ga0065716_10118591	3300005277	Arabidopsis Rhizosphere	MKKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMFSYEGGAVFSLTNGEVENGLTYDGLVRKIFECDHTVVI*
Ga0065704_100070994	3300005289	Switchgrass Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0065704_108255871	3300005289	Switchgrass Rhizosphere	KKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMFSYEGGAVLSLTNGEVENGLTYDGLIRKIFECDHTVVI*
Ga0065712_103643562	3300005290	Miscanthus Rhizosphere	IDQIDSALFHPTKSQGDVILLGESVGRMFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEHDHTMVI*
Ga0065712_103869082	3300005290	Miscanthus Rhizosphere	LLRKPVEQIDPALFLPEQSKGDVVLLQESGGRLFPYEGGSMFFVSDGEVQHGLTYDGLVKKIFECDHTIVI*
Ga0065712_104991051	3300005290	Miscanthus Rhizosphere	MKKTLYLLRKPVEQVDAALFLPGQSKGDVVLLDGSGGELFPYAGGSVSSLTEGDTEHGLTYDGLIRKIFECDHTIVI*
Ga0065712_105985952	3300005290	Miscanthus Rhizosphere	MKKTLYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRMFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0070683_1021922181	3300005329	Corn Rhizosphere	MKKTLYLLRKPVEQVDAALFLPGQSKGDVVLLDGSGGELFPYAGGSVSSLTEGDTEHGLTYDGLI
Ga0070660_1000425003	3300005339	Corn Rhizosphere	MKKTLYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0070671_1012009341	3300005355	Switchgrass Rhizosphere	LYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0070688_1015712662	3300005365	Switchgrass Rhizosphere	MKRTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0070685_102703162	3300005466	Switchgrass Rhizosphere	MKKTLYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0070672_1002546112	3300005543	Miscanthus Rhizosphere	IDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0068861_1006967741	3300005719	Switchgrass Rhizosphere	KKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0066903_1023139652	3300005764	Tropical Forest Soil	TLYLLRKPIDEIDPAVFLPGESQGDVVLLEENAGRQFSFAGGTVFSLTNVEAGNGITYDGLVKKIFECDHTIVI*
Ga0070715_100920882	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEASDGRVFPYTGGAIFSLTNGDAEHCLTYDGLVRKIFECDHTVVI*
Ga0070716_1001325532	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEASDGRVFPYTGGAIFSLTNGDAEHRLTYDGLVRKIFECDHTVVI*
Ga0075421_1000342541	3300006845	Populus Rhizosphere	MKKTLYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIF
Ga0075421_1001737615	3300006845	Populus Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQGDVLLLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIF
Ga0075421_1004478542	3300006845	Populus Rhizosphere	MKKILYLLRKPVEQIDPALFLPEQSKGDVVLLQESGGRLFPYEGGSMFFVSDGEVQHGLTYDGLVKKIFECDHTIVI*
Ga0075420_1000053659	3300006853	Populus Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQGDVLLLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0075434_1002275193	3300006871	Populus Rhizosphere	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEASDGRVFPYTGGAIFSLTYGDAEHGLTYDGLVRKIFEYDQTVVI*
Ga0075429_1004669351	3300006880	Populus Rhizosphere	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESGGRIFPYEGGVVFSIRNDEVDDGLTYDDLVKKI
Ga0075429_1006706561	3300006880	Populus Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQGDVLLLEESVGRLFPYEGGVVFSLRNNEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0075426_101609044	3300006903	Populus Rhizosphere	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESGGRIFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0075424_1005602534	3300006904	Populus Rhizosphere	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESGGRMFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0075418_111284533	3300009100	Populus Rhizosphere	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESGGRIFPYEGGVVFSIRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0114129_100947341	3300009147	Populus Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQWDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0114129_103323303	3300009147	Populus Rhizosphere	LRKPVEQIDPALFLPEQSKGDVVLLQESGGRLFPYEGGSMFFVSDGEVQHGLTYDGLVKKIFECDHTIVI*
Ga0111538_129476922	3300009156	Populus Rhizosphere	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESGGRIFSYEGGVVFSLRNDEVDDGLTYDDLVKKIFE
Ga0105092_100186465	3300009157	Freshwater Sediment	MKRTLYLLRKPPDQIDPAVFHPLESQGDVVLLEESGGRMFPYAGGAVFSLIDNSADHALTYDELVKKIFEHDHTVVI*
Ga0075423_111627102	3300009162	Populus Rhizosphere	YLLRKPVEQIDPALFLPEQSKGDVVLLQESGGRLFPYEGGSMFFVSDGEVQHGLTYDGLVKKIFECDHTIVI*
Ga0134123_120619841	3300010403	Terrestrial Soil	MKKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMFPYEGGAVFSLTNGEVENGLTYDGLIRKIFECDHTVVI*
Ga0157292_102775771	3300012900	Soil	PYAGLFMKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0157295_100069622	3300012906	Soil	DQIDSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0157308_100004403	3300012910	Soil	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0164300_101705912	3300012951	Soil	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEESGGRMFPYTGGAIFSLTNGHGEHGLTYDDLVKKIFECDHTVMI*
Ga0164300_102040851	3300012951	Soil	MKKTLYLLRKPIDQIDPALFLPAKSQGDVVLLEESGGRMFPYTGGAIFSFSLSDGLTYDDLVRKIFEFDHTVVI*
Ga0164298_102262532	3300012955	Soil	MKKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMFSYEGGAVLSLTNGEVENGLTYDGLIRKIFECDHTVVI*
Ga0164298_102271581	3300012955	Soil	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILVEESGGRMFPYTGGAIFSLTNGDGEHGLTYDDLVKKIFECDHTVMI*
Ga0164303_106374521	3300012957	Soil	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEESGGRMFPYTGGAIFSLTNGDGEHGLTYDDLVKKIFECDHTVMI*
Ga0164299_102886273	3300012958	Soil	MKKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMFFYEGGAVLSLTNGEVENGLTYDGLIRKIFECDHTVVI*
Ga0164299_105859011	3300012958	Soil	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEESGGRMFPYTGGAIFSLTNGHGEHGLTYDDLVKKIFESDHTVMI*
Ga0164299_107179101	3300012958	Soil	MKRTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0164302_113916611	3300012961	Soil	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDL
Ga0164309_100279701	3300012984	Soil	SLFMKKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMFSYEGGAVFSLTNGEVENGLTYDGLIRKIFECDHTVVI*
Ga0164307_108026741	3300012987	Soil	TGFFMKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEESGGRMFPYTGGAIFSLTNGDGEHGLTYDDLVKKIFECDHTVMI*
Ga0164306_116096062	3300012988	Soil	YLLRKPIDQIDPALFLPAKSQGAVVLLKESGGRMFPYTGGAIFSLSLSDGLTYDELVRKIFEFDHTVVI*
Ga0157307_10095201	3300013096	Soil	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHT
Ga0163162_104117142	3300013306	Switchgrass Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQGDVLLLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0075312_10033114	3300014254	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVDGIGGRKFPYAGGTVFTLHGGEADHVLTYDDLVKKIFECDHTVVI*
Ga0075311_11224482	3300014259	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVDGIGGRKFPYAGGTVFTLHVGEADYVLTYDDLVKKIFECDHTVVI*
Ga0075309_10074864	3300014268	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVDGVGGRKFPYAGGTVFTLQSGEADYVLTYDDLVKK
Ga0075326_11687911	3300014271	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVDGIGGRKFPYAGGTVFTLQGGEADHVLTYDDLVKKIFECDHTVVI*
Ga0075331_11340712	3300014310	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVDGTGGRKFPYAGGTVFTLHGGEADHVLTYDDLVKKIFECDHTVVI*
Ga0157379_126475792	3300014968	Switchgrass Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLGESVGRMFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0132258_102003994	3300015371	Arabidopsis Rhizosphere	MKKTLYLLRKPVEQIDPALFLPEQSKGDVVLLQESGGRLFPYEGGSMFFVSDGEVQHGLTYDGLVKKIFECDHTIVI*
Ga0132258_107506211	3300015371	Arabidopsis Rhizosphere	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEASDGRVFPYTGGAIFSLTNGDAEHGLTYDGLVRKIFECDHTVVI*
Ga0132258_116429862	3300015371	Arabidopsis Rhizosphere	FMKKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMSSYEGGAVFSLTNGEVENGLTYDGLIRKIFECDHTVVI*
Ga0132258_127969331	3300015371	Arabidopsis Rhizosphere	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESGGRMFPYEGGVVFALRNDEVDDGLTYDDLVKKIFEYDHTVVI*
Ga0132256_1003636862	3300015372	Arabidopsis Rhizosphere	MKKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMSSYEGGAVFSLTNGEVENGLTYDGLIRKIFECDHTVVI*
Ga0132257_1003904444	3300015373	Arabidopsis Rhizosphere	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESGGRMFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYD
Ga0132255_1043039951	3300015374	Arabidopsis Rhizosphere	MKKTLYLLRKPIDQIDSALFHPAKSQGDVIVLEESGGRMFPYEGGVVFALRNDEVDDGLTYDDLVKKIFEYDHTV
Ga0184611_10633112	3300018067	Groundwater Sediment	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEESGGRMFPYTGGAIFSLTNGDGEHGLTYDGLVKKIFECDHTVMI
Ga0173479_100166482	3300019362	Soil	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI
Ga0247747_10083002	3300022737	Soil	MKKTLYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
Ga0247743_10031052	3300023067	Soil	PIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI
Ga0247748_10692111	3300023168	Soil	MKKTLYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI
Ga0247798_10042103	3300023260	Soil	MKKTLYLLRKPIDQINSALFHPTKSQGDVLLLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
Ga0210143_10747342	3300025792	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVHEVGGRKFPYAGGTVFTLQGGEADYVLTYDDLVKKIFECDHTVVI
Ga0207647_100510192	3300025904	Corn Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRMFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
Ga0207707_104771971	3300025912	Corn Rhizosphere	TLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
Ga0207652_103011372	3300025921	Corn Rhizosphere	IDQINSALFHPTKSQGDVLLLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
Ga0207665_100476195	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTLYLLRKPIDQIDPALFLPAKSQGDVILLEASDGRVFPYTGGAIFSLTNGDAEHGLTYDGLV
Ga0207661_117604651	3300025944	Corn Rhizosphere	MKKTLYLLRKPVEQVDAALFLPGQSKGDVVLLDGSGGELFPYAGGSVSSLTEGDTEHGLTYDGLIRKIFECDHTI
Ga0208654_10089263	3300026062	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVDGVGGRKFPYAGGTVFTLQGGEADHVLTYDDLVKKIFECDHTVVI
Ga0208912_10504392	3300026090	Natural And Restored Wetlands	MKKTLYLLRKPLDQINPAVFLPSESQGDVVLVDGIGGRKFPYAGGTVFTLQGGEADHVLTYDDLVKKIFECDRTVVI
Ga0209973_10033794	3300027252	Arabidopsis Thaliana Rhizosphere	MKKTLYLLRKPPDRINPAVFHPSESQGDVVLLEESGGRMFPYTGGIVFSLRDDTADDALTYDDLVKKIFEYDHTVVI
Ga0209984_10001006	3300027424	Arabidopsis Thaliana Rhizosphere	MKKTLYLLRKPIDQIDSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVNDGLTYDDLVKKIFEYDHTVVI
Ga0209982_10004084	3300027552	Arabidopsis Thaliana Rhizosphere	MKKTLYLLRKPIDQINSALFHPTKSHGDVILLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI
Ga0209382_122404152	3300027909	Populus Rhizosphere	MKKILYLLRKPVEQIDPALFLPEQSKGDVVLLQESGGRLFPYEGGSMFFVSDGEVQHGLTYDGLVKKIFECDHTIVI
Ga0268264_109884801	3300028381	Switchgrass Rhizosphere	KKTLYLLRKPIDQINSALFHPTKSQGDVLLLEESVGRLFPYEGGVVFSLRNAEVDDGLTYDDLVKKIFEYDHTVVI
Ga0310888_100217413	3300031538	Soil	YAGLFMKKTLYLLRKPIDQINSALFHPTKSQGDVLLLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI
Ga0310886_101446712	3300031562	Soil	MKKTLYLLRKPIDQINSALFHPTKSQGDVLLLEESVGRLFPYEGGVVFSLRNNEVDDGLTYDDLVKKIFEYDHTVVI
Ga0310886_105051982	3300031562	Soil	MKKTLYLLRKPIDQIDPALFLPTNSQGDVVLLEESGGRMFSYEGGAVLSLTNGEVENGLTYDGLIRKIFECDHTVVI
Ga0307416_1001764921	3300032002	Rhizosphere	MKTLYLLRKPLHRIDPAIFLPAESQGDVVLLEESGERVFRYAGGSVFTLTGGELADGLTYDSLVRKIFECDNTVVI
Ga0310906_100864541	3300032013	Soil	MKKTLYLLRKPIDQINSALFHPTKSQGDVILLEESVGRLFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEY
Ga0310810_112309481	3300033412	Soil	MKKTLYLLRKPIDQIDSALFHPAKSQGDVILLEESGGRIFPYEGGVVFSLRNDEVDDGLTYDDLVKKIFEYDHTVVI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101984

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences