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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F101989 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 102 |
| Average Sequence Length | 56 residues |
| Representative Sequence | MTVVEIPSGTHMTEQWLGGRFRLDERIGLDDQVSGISGPCGSSWEARGLSLWKATDQ |
| Number of Associated Samples | 98 |
| Number of Associated Scaffolds | 102 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 99.02 % |
| % of genes from short scaffolds (< 2000 bps) | 97.06 % |
| Associated GOLD sequencing projects | 93 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.15 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (92.157 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.549 % of family members) |
| Environment Ontology (ENVO) | Unclassified (21.569 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (47.059 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.15 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 102 Family Scaffolds |
|---|---|---|
| PF01546 | Peptidase_M20 | 60.78 |
| PF07687 | M20_dimer | 6.86 |
| PF00106 | adh_short | 0.98 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 92.16 % |
| All Organisms | root | All Organisms | 7.84 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 22.55% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 6.86% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 6.86% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 5.88% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.90% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 4.90% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 3.92% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 3.92% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 2.94% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.94% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.96% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.96% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 1.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 1.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.96% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.98% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 0.98% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.98% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.98% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.98% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.98% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.98% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.98% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.98% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 0.98% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Sugar Cane Bagasse Incubating Bioreactor | Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor | 0.98% |
| Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 0.98% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000156 | Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic | Engineered | Open in IMG/M |
| 3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300005177 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 | Environmental | Open in IMG/M |
| 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
| 3300005560 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119 | Environmental | Open in IMG/M |
| 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300006086 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 | Environmental | Open in IMG/M |
| 3300006102 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013 | Environmental | Open in IMG/M |
| 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006354 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 | Environmental | Open in IMG/M |
| 3300006573 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
| 3300006800 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 | Environmental | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
| 3300009520 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG | Environmental | Open in IMG/M |
| 3300009522 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG | Environmental | Open in IMG/M |
| 3300009525 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG | Environmental | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010337 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010876 | Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
| 3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012359 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG | Environmental | Open in IMG/M |
| 3300012480 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610 | Host-Associated | Open in IMG/M |
| 3300012505 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610 | Host-Associated | Open in IMG/M |
| 3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014200 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG | Environmental | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300018060 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
| 3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300024178 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35 | Environmental | Open in IMG/M |
| 3300024181 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34 | Environmental | Open in IMG/M |
| 3300024279 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33 | Environmental | Open in IMG/M |
| 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027651 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027725 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes) | Environmental | Open in IMG/M |
| 3300027727 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
| 3300027889 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes) | Environmental | Open in IMG/M |
| 3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
| 3300031544 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26 | Environmental | Open in IMG/M |
| 3300031564 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21 | Environmental | Open in IMG/M |
| 3300031681 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20 | Environmental | Open in IMG/M |
| 3300031682 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22 | Environmental | Open in IMG/M |
| 3300031724 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20 | Environmental | Open in IMG/M |
| 3300031768 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22 | Environmental | Open in IMG/M |
| 3300031771 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19 | Environmental | Open in IMG/M |
| 3300031781 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20 | Environmental | Open in IMG/M |
| 3300031796 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24 | Environmental | Open in IMG/M |
| 3300031805 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23 | Environmental | Open in IMG/M |
| 3300031819 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21 | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300031845 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18 | Environmental | Open in IMG/M |
| 3300031846 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19 | Environmental | Open in IMG/M |
| 3300031896 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19 | Environmental | Open in IMG/M |
| 3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032052 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19 | Environmental | Open in IMG/M |
| 3300032067 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22 | Environmental | Open in IMG/M |
| 3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
| 3300032783 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3 | Environmental | Open in IMG/M |
| 3300032955 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| NODE_05510612 | 3300000156 | Sugar Cane Bagasse Incubating Bioreactor | MTVVEIPSGTRTAERWLGGRFRLDERISLDDQVNGPCGSWWEARGLSLWKATDQLLS |
| Ga0062387_1015327932 | 3300004091 | Bog Forest Soil | MTVVEIPSGTQGANSWPGQRLLGQRLLGGRFRLDERISLDDQVSGSLGPRGSSWEARGLSLWKATDQLL |
| Ga0066690_105137811 | 3300005177 | Soil | MTVVEIPSGTHTTEQWLGGRFRLDERIGLDDQVSGISGPCGSSWEARGLSL |
| Ga0070688_1012968022 | 3300005365 | Switchgrass Rhizosphere | MTVVDIPPGAHTAETWLGGRFRLDERVSLDDQVSGFSGSCGSLWEARGLSLWKATDQ |
| Ga0070711_1020175541 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVVEIPSGTHMTDQWLGGRFRLDERIGLDDQVSGISGPCGSSWEARGLSLWKATDQ |
| Ga0070694_1014941831 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVVEIPSGAHMTEQWLGGRFRLDERIGLDDQVSGISGPGGSSWEARGLSLWKATD |
| Ga0070706_1002401652 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVVDIPSGARTAETWLGGRFRLDERISLDDQVSGFSGSRSSSREARGLSLWKATDQLLN |
| Ga0066670_100987232 | 3300005560 | Soil | MTVAETPPGTHSAARLLGGRFRLDERIGLDDQVSGFSGPCGSWWEARGLSLW |
| Ga0068855_1015560302 | 3300005563 | Corn Rhizosphere | MTVVEIPSGTHTTKQWLGGRFRLDERIGLDDQVSGISGPCGSSWEARGLSL |
| Ga0068856_1024532281 | 3300005614 | Corn Rhizosphere | MTVVDIPAGARTGETWLGGRFRLGERISLDDQVSGFSGSCGSSWEARGLSLWKATDQLLNRPVTIY |
| Ga0066903_1037031622 | 3300005764 | Tropical Forest Soil | MTVVEVPSGTHTTERWLGGRFRLDERISLDDQVNGPCGSSWEARGLS |
| Ga0075019_104255592 | 3300006086 | Watersheds | MTVVEVPSGTQGANRWPGQRLLGRRLLGGRFRLDERISLDDQVSGSLGPR |
| Ga0075015_1003642071 | 3300006102 | Watersheds | MTVVEIPSGTHAGNRWLGGRLLGGRFRLDERISLDDQVSGPCGFSWEARGFSLWKASDQLLGRPVTIY |
| Ga0070715_100833792 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MAFVEIPPGTHGTISLLGGRFRLDERISLDDQVPSPCGSSWEARGLSLWK |
| Ga0070712_1019852631 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVVDIPPGARTGETWLGGRFRLGERVSLDDQVSGFSGSCGSLWEARGLSLWKATDQLLNRPVTIYLLPR |
| Ga0070765_1022948911 | 3300006176 | Soil | MTVVEVPSGTHMTDQWLGGRFRLDERIGLDDQVSGISGPCGSSWEARGLSLWKATDQL |
| Ga0075021_111797402 | 3300006354 | Watersheds | VTVVEIPSGTHVAERWLGGRFRLDERISLDDQVSGFSGSCGSSWEARGLSLWKATDQLLARPVTIYLLPA |
| Ga0074055_118188452 | 3300006573 | Soil | MTVVDIPSGARTAETWLGGRFRLDERISLDDQVSGFSGSRGSSREARGLSLWKATD |
| Ga0079222_108926312 | 3300006755 | Agricultural Soil | MAVVEIPSGTYGTTRLLGGRFRLDERISLDEQVSGPCGSSWEARGLSLWKATDSLLGRPVTIYLL |
| Ga0079222_114435131 | 3300006755 | Agricultural Soil | MTVVDIPAGARTGETWLGGRFRLGERISLDDQVSGFSGSCGSSWEARGLSLWKATDQLLNRP |
| Ga0066660_106969892 | 3300006800 | Soil | MTVVEIPSGAHMTEQWLGGRFRLDERIGLDEQVSGISGPCGSSWEARG |
| Ga0079221_113202962 | 3300006804 | Agricultural Soil | MAFVETPPGTHGTISLLGGRFRLDERISLDDQVSGPCGSSWEARGLSLWKATDSLLGRPV |
| Ga0079220_106497801 | 3300006806 | Agricultural Soil | MTVVDIPPGAHTGETRLGGRFRLDERVSLDDQVSGFSGSCGSLWEARGLSLWKATDQ |
| Ga0079220_113617431 | 3300006806 | Agricultural Soil | MTVVEIPSGTHTADSAPGRVDRALGGRFRLDERISLGDQLSGPCGSSWEARGLSLWKATD |
| Ga0075425_1007313211 | 3300006854 | Populus Rhizosphere | MTVVEIPSGTHMTEQWLGGRFRLDERIGLDDQVSGPCGSSWEARGLSLWKATDQLLN |
| Ga0068865_1003424592 | 3300006881 | Miscanthus Rhizosphere | MTVVDIPPGARTGETWLGGRFRLGERVSLDDQVSGFSGSCGSSWEARGLSL |
| Ga0075435_1020639511 | 3300007076 | Populus Rhizosphere | MTVVEIPSGTHMTEQWLGGRFRLDERIGLDDQVSGPCGSSWEARGLSLWKATDQLLNRPVTIYL |
| Ga0066710_1037888702 | 3300009012 | Grasslands Soil | MTVVGIPSGTHMTEQWLGGRFRLDERISLDDQVSGISGPCGSSWEARGLSLWK |
| Ga0099828_109166361 | 3300009089 | Vadose Zone Soil | MTVVEIPSGTHIADRWLGGRFRLDERISLDDQVSGSCDSSWEARGLS |
| Ga0066709_1003837781 | 3300009137 | Grasslands Soil | MTVDEMPAGAHMAKRWLGGRFRLDERICLDDQVSGFPGPCRFSWEARGFSLWKATDQLLSRPVTIYL |
| Ga0075423_129051711 | 3300009162 | Populus Rhizosphere | MAFVGIPPGTISLLGGRFRLDERISLDDQVPGPCGSSWEARGLS |
| Ga0116214_13872551 | 3300009520 | Peatlands Soil | MTVVEIPSGTHAGNRWLGGRLLGGRFRLDERNSLDDQVSGPRGFSWEARGFSLWKASDQLLG |
| Ga0116218_12991661 | 3300009522 | Peatlands Soil | MTVVEIPSGTHAGNRWLGGRLLGGRFRLDERNSLDDQVSGPRGFSWEARGFSLWKASDQLLGRPVTIYLL |
| Ga0116220_105448592 | 3300009525 | Peatlands Soil | MTVVEIPSGTQGANRWLFRRLLGGRFRLDERISLDNQVSGSLGPRGSSWEARGLSLWKAS |
| Ga0105237_111220491 | 3300009545 | Corn Rhizosphere | MTVVEIPSGAHMTEQWLGGRFRLDERIGLDDQVSGISGPGGSSWEARGLSLWKATDQLLNRPVTIYL |
| Ga0126382_123994921 | 3300010047 | Tropical Forest Soil | MTVVEIPSRTLGGRFRLNERISLDDQVSGPCGSSWEARGLSLWKATDQLLGRPVTIYLLPRG |
| Ga0134062_101352591 | 3300010337 | Grasslands Soil | MTVVEIPSGTHMAAHMSGRWLGGRFRLDERISLDDQVSGFPGPCGSSWEARGLSLWKAT |
| Ga0126370_108465422 | 3300010358 | Tropical Forest Soil | MTVVEIPSGTRTADRWLGGRFRLDERISLDDQVSGFPGPCGSSWEARGLSLWKATDRLL |
| Ga0126379_137311311 | 3300010366 | Tropical Forest Soil | MTVVEIPSRTLGGRFRLNERISLDDQVSGPCGSSWEARGLSLWKATDQLL |
| Ga0134125_130389501 | 3300010371 | Terrestrial Soil | MTVVDIPPGTRTGETRLGGRFRLDERVSLDDQVSGFSGSCGSLWEARGLSLWKATDQLLNRPVTI |
| Ga0126361_101957582 | 3300010876 | Boreal Forest Soil | MTVVEIPPGTHSAARLLGGRFPLDERISLDDQVPGPCGSSWEARGLSWWKATDQLLGRP |
| Ga0137389_103396121 | 3300012096 | Vadose Zone Soil | MTVVEIPSGTHIADRWLGGRFRLDERISLGDQVSGPCGSSWEARGLSWWKATDQ |
| Ga0137378_117888381 | 3300012210 | Vadose Zone Soil | MTLVETPSGADTADRRLGGRFRLDERISLDDQVGGSSGRCDSSWEARGLSLLKATDQL |
| Ga0137385_107147862 | 3300012359 | Vadose Zone Soil | MTVVRIPSGTHMTEQWLGGRFRLDERICLDDQVSGISGPCGSSWEARGLSLWKAT |
| Ga0157346_10106802 | 3300012480 | Arabidopsis Rhizosphere | MTVVDIPPGAHTGETWLGGRFRLDERVSLDDQVSGFSGSCGSLWEARGLSLW |
| Ga0157339_10252121 | 3300012505 | Arabidopsis Rhizosphere | MTVVDIPPGAHTAAHMSGRWLGGRFRLDERINLDDQVSGFSGSCGSLWEARGLSLWKATDQL |
| Ga0137413_109734351 | 3300012924 | Vadose Zone Soil | MTAVEIPSGTHMTEQWLGGRFRLDERIGLDDQVSGFSGPCGSSWEARGL |
| Ga0164302_108932422 | 3300012961 | Soil | MTVVDIPPGARTGETWLGGRFRLGERVSLDQVSGFSGSCGSLWEARGLSLWKATDQLLN |
| Ga0126369_120585552 | 3300012971 | Tropical Forest Soil | MTVVETPPGTNRTASLLGGRFRLDERISLDDQVSSPCGSSWEARGLSLWKATD |
| Ga0164308_105356211 | 3300012985 | Soil | MTVVDIPAGARTGETWLGGRFRLGERVSLDDQVSGFSGSCGSSWEARGLSLWKATDQLLNRP |
| Ga0157375_103640602 | 3300013308 | Miscanthus Rhizosphere | MTVVDIPPGARTGETWLGGRFRLGERVSLDDQVSGFSGSCGSSWEARGLSLWKA |
| Ga0181526_108310531 | 3300014200 | Bog | MTVVEIPSGTPAGNRWLGGRLLGRRFRLDERISLDDQVSGPCGFSWEARGFSLWK |
| Ga0157379_124437272 | 3300014968 | Switchgrass Rhizosphere | MTVVDIPPGARTGETWLGGRFRLDERVSLDDQVSGFSGSCGSLWEARGLSLWKATD |
| Ga0132258_120241311 | 3300015371 | Arabidopsis Rhizosphere | MAFVEIPPGTHTASLLGGRFRLDERISLDEQVSGPCGSSWEARG |
| Ga0182034_107700072 | 3300016371 | Soil | MTVVDIPSGTPTTERWLGGRFRLDERISLDDHVNGPCGSSWEARGLSLWKATD |
| Ga0182040_102397412 | 3300016387 | Soil | MTVVEIPPGRHMTGMRLGGRFRLDERISLDDQVSGACGSSWEAHGLSLWKA |
| Ga0182038_108644721 | 3300016445 | Soil | MTVVEIPPGTHMTGMRLGGRFRLDERISLDDHVNGPCGSSWEARGLS |
| Ga0187765_112100561 | 3300018060 | Tropical Peatland | MTAVEIPSGTHIAERWLGGRFRLDERISLDDQVSGFPGPRGSSWEARGLSL |
| Ga0210403_113667341 | 3300020580 | Soil | VTVVEMPSGAHMAERWLGGRFRLDERISTDDQVSGALGPCGSSWEAR |
| Ga0210396_108320711 | 3300021180 | Soil | MTVVEIPSGAQMAERWPGGRFRLDERISTDDQVSGALGPCGSSWEARGLSLWKASDQLL |
| Ga0210393_101577951 | 3300021401 | Soil | MTVVEIPSGTHAAQRSLGGRFRLEERISSGDQVSGSSGPCGSSWEARGLSLWKATDQLIGRPVAISLL |
| Ga0210390_108504032 | 3300021474 | Soil | MTVVEIPSGTHAAQRCLGGRFRLDERISLDDQVSGFSGPCGSSWEAR |
| Ga0126371_128127651 | 3300021560 | Tropical Forest Soil | MTVVEIPSGTHTAPRWLGGRFRLDERISLDDQVTRPCGSSWETRGLS |
| Ga0247694_10395861 | 3300024178 | Soil | MTVVDIPAGARTGETWLGGRFRLGERISLDDQVSGFSGSCGSSWEARGLSLWK |
| Ga0247693_10035233 | 3300024181 | Soil | MTVVDIPAGARTGETWLGGRFRLGERISLDDQVSGFSGSCGSSWEARGL |
| Ga0247692_10443722 | 3300024279 | Soil | MTVVDIPPGAHTAETWLGGRFRLDERVSLDQVSGFSGSCGSLWEAPGLSLW |
| Ga0207696_11580012 | 3300025711 | Switchgrass Rhizosphere | MTVVDIPAGARTGETWLGGRFRLDERVSLDDQVSGFSGSCGSLWEARGLSLWKA |
| Ga0207692_109674722 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVVEIPSGTHKADSAPGRVDRTLGGRFRLDERISLGDQLSGPCGSSWEARGLSLWKATDQLLGRPVTIYL |
| Ga0207684_104809261 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MTVVDIPSGARTAETWLGGRFRLDERISLDDQVSGFSGSRSSSREARGLSLWKATDQLLNRPVTIYLLP |
| Ga0207694_117526542 | 3300025924 | Corn Rhizosphere | MTVVDIPAGARTGETWLGGRFRLGERISLDDQVSGFSGSCGSSWEARGLSLWKATDQLLNRPVTI |
| Ga0209217_10715362 | 3300027651 | Forest Soil | MTVVEVPSGTHTTQGWLGERFRLDERISLDDQVSGFSGPCGSSWEARGLSLWKASDQ |
| Ga0209178_10699512 | 3300027725 | Agricultural Soil | MTVVETPPGTHSTASLLGGRFRLDERISLDDQVSSPCGSSWEARGLSLWKATDSLLGRPVTI |
| Ga0209328_102175431 | 3300027727 | Forest Soil | MTVVEVPSGAHRTQTSLGGRFRLDERISLDDQVSGPCGSSWEARGLSLWKATD |
| Ga0209073_104608771 | 3300027765 | Agricultural Soil | MTVVDIPSGARTAETWLGGRFRLDERISLDDQVSGFSGSRGSSREARGL |
| Ga0209380_100421214 | 3300027889 | Soil | MTVVEVPSGTHTTQGWLGGRFRLDERISLDDQVSGFSGPCGSSWEARGLSLWKASDQLLG |
| Ga0209068_102116551 | 3300027894 | Watersheds | MTVVEMPPGAHTTARMTAHTAGTWLGGRFRLDERISTDEQVSGALGPCGFSWE |
| Ga0209526_102353321 | 3300028047 | Forest Soil | MTVVEVPSGAHRTQTSLGGRFRLDERISLDDQVSGPCGSSWEARGLSLWKATDQLLGRPVTIYL |
| Ga0209526_104774642 | 3300028047 | Forest Soil | MTVVEIPSGTHMTEQWLGGRFRLDERIGLDDQVSGISGPCGSSWEARGLSLWKATDQ |
| Ga0302326_106232612 | 3300031525 | Palsa | MTVVEMPSGTQAWLGGRFRLGERISVSDHIGGPCATSWEARGLSLWKATDQLLGRPVTIYLLPA |
| Ga0318534_108617092 | 3300031544 | Soil | MTVVEMPSGTHTAAHTAGRRLGGRFRLDERIRLDDQVSGPCGSSWEARGLSLWKATD |
| Ga0318573_104861611 | 3300031564 | Soil | MTAVEMPSGTHVADRWLGGRFRLDERISLDDQLGEPCGSSW |
| Ga0318572_104491801 | 3300031681 | Soil | MAVVEIPSGRHMAVPMAGRWLGGRFRLDERISLDDQVSGFPGPCGSSWEARGLS |
| Ga0318560_102526651 | 3300031682 | Soil | MTVVEIPPGTHMTGMRLGGRFRLDERISLDDQVSDPCGSSWEAHGLS |
| Ga0318500_102563511 | 3300031724 | Soil | MTVVEIPPGRHMTGMRLGGRFRLDERISLDDQVSGFPGPCGSSWEARGLSLWKATDQLLSRPVTI |
| Ga0318509_104973071 | 3300031768 | Soil | MTVVEIPPGTHMTGMRLGGRFRLDERISLDDQVSGPCGSSWETHGLSLWKATDQLLSRPVTI |
| Ga0318546_109936921 | 3300031771 | Soil | MTVVEMPSGTHTAAHMAGRRLGGRFRLDERIRLDDQVSGPCGSSWEARGL |
| Ga0318547_100736883 | 3300031781 | Soil | MTVVDIPPGTPTTERWLGGRFRLDERISLDDHVNGPCGSSWEARGLSLWKATDQLLS |
| Ga0318576_104383811 | 3300031796 | Soil | MTVVEIPPGTHMTGMRLGGRFRLDERISLDDQVTGSCGSSWEAHGLSLWKA |
| Ga0318497_102162222 | 3300031805 | Soil | MTVAEIPSGTHAADRLLGGRFGLDERISLDDQVGGSCGSVWEARGLSLWKATDRLLARPVTVY |
| Ga0318568_100273271 | 3300031819 | Soil | MTVVDIPPGTPTTERWLGGRFRLDERISLDDHVNGPCGSSWEARGLSLW |
| Ga0307473_108756061 | 3300031820 | Hardwood Forest Soil | MTVVEMPSGAHIAERWLGGRFRLDERIGLDDQVSSISGPCGSSWEARGLSVWKATDQLL |
| Ga0318511_102110541 | 3300031845 | Soil | MTAVEIPSGTCVADRWLGERFRLDERISLDDLVSGPCGSSWE |
| Ga0318512_104932262 | 3300031846 | Soil | MTVVEIPPGTHMTGMRLGGRFRLDERISLDDQVSDPCGSSWEAHGL |
| Ga0318551_101276042 | 3300031896 | Soil | MTVVDIPPGTPTTERWLGGRFRLDERISLDDHVNGPCGSSWEARGLSLWKATDQLLSR |
| Ga0306923_112806122 | 3300031910 | Soil | MTAVEIPSGTCVADRWLGERFRLDERISLDDLVSGPCGSSWEARGLSLWKATD |
| Ga0306922_104375272 | 3300032001 | Soil | MTVVEIPPGRHMTGMRLGGRFRLDERISPDDQVSGSCGSSWEAH |
| Ga0318506_104968831 | 3300032052 | Soil | MTVVEMPSGTHTAAHMAGRRLGGRFRLDERIRLDDQVSGPCGSSWEARGLSLWKATDQLLSRPVTIYL |
| Ga0318524_102804432 | 3300032067 | Soil | MTAVEIPSGTCVADRWLGERFRLDERISLDDLVSGPCGSSWEARGLSLWKATDQL |
| Ga0306924_106422911 | 3300032076 | Soil | MTVVEMPSGTHTAAHMAGRRLGGRFRLDERVRLDDQVSEPCGSSWEARGLSLWKA |
| Ga0335079_102796841 | 3300032783 | Soil | MTIADLPSGAHMAAHMSGRSLGGRFRLDERISLEDQVSGFSGARGSSREARGLSL |
| Ga0335079_107425442 | 3300032783 | Soil | MTVVEIPSGTRTAERWLGGRFRLDERISLDDQVNGPCGSWWEARGLSLRKATDQLLSRPVTIYLLPS |
| Ga0335076_109716791 | 3300032955 | Soil | MTVVEIPPGAYTGERRLGGRFRLDERISLDDQVTGPCGSSWEARGLSLWKATDQLLSRPV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |