Metagenome / Metatranscriptome Family F102027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	75 residues
Representative Sequence	MHRPFVTTVKFENENGGVMRLEYAVAAVDTADAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Number of Associated Samples	72
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.71 %
% of genes near scaffold ends (potentially truncated)	35.29 %
% of genes from short scaffolds (< 2000 bps)	88.24 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.569 % of family members)
Environment Ontology (ENVO)	Unclassified (28.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.588 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.73% β-sheet: 19.23% Coil/Unstructured: 49.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF10073	DUF2312	27.45
PF01734	Patatin	1.96
PF00300	His_Phos_1	1.96
PF00072	Response_reg	0.98
PF00582	Usp	0.98
PF07690	MFS_1	0.98
PF07238	PilZ	0.98
PF01068	DNA_ligase_A_M	0.98
PF01370	Epimerase	0.98
PF14534	DUF4440	0.98
PF08541	ACP_syn_III_C	0.98
PF00589	Phage_integrase	0.98
PF01565	FAD_binding_4	0.98
PF02738	MoCoBD_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.96
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.96
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.96
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.98
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.37 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.47 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.98 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.98 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.98 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Sinobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae	0.98 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	0.98 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Sinobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	0.98 %
unclassified Methylocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa	0.98 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Methylocapsa sp. S129	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	0.98 %
Sinobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	0.98 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10032854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1339	Open in IMG/M
3300001546\|JGI12659J15293_10029319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1365	Open in IMG/M
3300003505\|JGIcombinedJ51221_10070932	Not Available	1357	Open in IMG/M
3300003505\|JGIcombinedJ51221_10280766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300005332\|Ga0066388_104529384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	708	Open in IMG/M
3300005366\|Ga0070659_102023860	Not Available	517	Open in IMG/M
3300005764\|Ga0066903_100892004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1607	Open in IMG/M
3300005764\|Ga0066903_104417573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300005764\|Ga0066903_106301562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	619	Open in IMG/M
3300009156\|Ga0111538_12773376	Not Available	614	Open in IMG/M
3300009522\|Ga0116218_1030004	All Organisms → cellular organisms → Bacteria → Proteobacteria	2439	Open in IMG/M
3300009522\|Ga0116218_1473303	Not Available	558	Open in IMG/M
3300009792\|Ga0126374_11515850	Not Available	551	Open in IMG/M
3300009826\|Ga0123355_10608734	Not Available	1293	Open in IMG/M
3300009826\|Ga0123355_10788483	Not Available	1063	Open in IMG/M
3300009826\|Ga0123355_11045576	Not Available	859	Open in IMG/M
3300009826\|Ga0123355_11791584	Not Available	580	Open in IMG/M
3300009826\|Ga0123355_11908641	Not Available	555	Open in IMG/M
3300010043\|Ga0126380_10848220	Not Available	753	Open in IMG/M
3300010043\|Ga0126380_11266073	Not Available	640	Open in IMG/M
3300010046\|Ga0126384_10949312	Not Available	780	Open in IMG/M
3300010047\|Ga0126382_10814680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	798	Open in IMG/M
3300010049\|Ga0123356_10150831	Not Available	2307	Open in IMG/M
3300010049\|Ga0123356_10474883	Not Available	1402	Open in IMG/M
3300010049\|Ga0123356_11123247	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300010049\|Ga0123356_11187955	Not Available	929	Open in IMG/M
3300010049\|Ga0123356_12844121	Not Available	605	Open in IMG/M
3300010162\|Ga0131853_11298034	Not Available	539	Open in IMG/M
3300010360\|Ga0126372_10267764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1478	Open in IMG/M
3300010361\|Ga0126378_10946822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	966	Open in IMG/M
3300010362\|Ga0126377_12813340	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300010366\|Ga0126379_12498465	Not Available	615	Open in IMG/M
3300010369\|Ga0136643_10534887	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300010375\|Ga0105239_10552804	Not Available	1311	Open in IMG/M
3300010376\|Ga0126381_100488134	Not Available	1735	Open in IMG/M
3300010376\|Ga0126381_105158021	Not Available	500	Open in IMG/M
3300010379\|Ga0136449_100138704	Not Available	4815	Open in IMG/M
3300010379\|Ga0136449_100265710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3168	Open in IMG/M
3300010379\|Ga0136449_100376347	Not Available	2535	Open in IMG/M
3300010398\|Ga0126383_11951543	Not Available	675	Open in IMG/M
3300010399\|Ga0134127_12637121	Not Available	582	Open in IMG/M
3300011418\|Ga0153954_1074981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	847	Open in IMG/M
3300012948\|Ga0126375_10847239	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300012960\|Ga0164301_11136226	Not Available	623	Open in IMG/M
3300013307\|Ga0157372_12270270	Not Available	623	Open in IMG/M
3300013308\|Ga0157375_12575204	Not Available	608	Open in IMG/M
3300016270\|Ga0182036_11177771	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300016294\|Ga0182041_11234650	Not Available	682	Open in IMG/M
3300016319\|Ga0182033_11960699	Not Available	533	Open in IMG/M
3300016319\|Ga0182033_12227071	Not Available	500	Open in IMG/M
3300016341\|Ga0182035_11225622	Not Available	670	Open in IMG/M
3300016357\|Ga0182032_10722473	Not Available	837	Open in IMG/M
3300016357\|Ga0182032_11476205	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300016371\|Ga0182034_10950472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	741	Open in IMG/M
3300016371\|Ga0182034_11129460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	680	Open in IMG/M
3300016371\|Ga0182034_11847653	Not Available	533	Open in IMG/M
3300016387\|Ga0182040_10479543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	990	Open in IMG/M
3300016422\|Ga0182039_10217574	All Organisms → cellular organisms → Bacteria → Proteobacteria	1535	Open in IMG/M
3300017970\|Ga0187783_10051911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3025	Open in IMG/M
3300017972\|Ga0187781_10324075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1094	Open in IMG/M
3300017995\|Ga0187816_10329300	Not Available	673	Open in IMG/M
3300020580\|Ga0210403_10478724	Not Available	1013	Open in IMG/M
3300020582\|Ga0210395_10034172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3729	Open in IMG/M
3300020582\|Ga0210395_10876225	Not Available	668	Open in IMG/M
3300020583\|Ga0210401_10180793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1965	Open in IMG/M
3300020583\|Ga0210401_10514020	Not Available	1060	Open in IMG/M
3300020583\|Ga0210401_10766770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	825	Open in IMG/M
3300021171\|Ga0210405_10242115	All Organisms → cellular organisms → Bacteria → Proteobacteria	1428	Open in IMG/M
3300021171\|Ga0210405_10279386	Not Available	1320	Open in IMG/M
3300021401\|Ga0210393_11495085	Not Available	538	Open in IMG/M
3300021407\|Ga0210383_10418541	Not Available	1156	Open in IMG/M
3300021432\|Ga0210384_10311702	All Organisms → cellular organisms → Bacteria → Proteobacteria	1417	Open in IMG/M
3300021474\|Ga0210390_10083278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2655	Open in IMG/M
3300021474\|Ga0210390_10212556	Not Available	1636	Open in IMG/M
3300021477\|Ga0210398_10421052	Not Available	1089	Open in IMG/M
3300021560\|Ga0126371_12327409	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300022512\|Ga0242676_1045351	Not Available	535	Open in IMG/M
3300027505\|Ga0209218_1109493	Not Available	579	Open in IMG/M
3300027908\|Ga0209006_11358057	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300028381\|Ga0268264_10957041	Not Available	861	Open in IMG/M
3300028906\|Ga0308309_10594066	Not Available	961	Open in IMG/M
3300031525\|Ga0302326_11787389	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300031545\|Ga0318541_10298532	All Organisms → cellular organisms → Bacteria → Proteobacteria	898	Open in IMG/M
3300031573\|Ga0310915_10919122	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300031708\|Ga0310686_101448716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	680	Open in IMG/M
3300031754\|Ga0307475_10693999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	812	Open in IMG/M
3300031896\|Ga0318551_10950110	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300031910\|Ga0306923_10626486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1205	Open in IMG/M
3300031912\|Ga0306921_12077278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	603	Open in IMG/M
3300031912\|Ga0306921_12729868	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300031942\|Ga0310916_11036038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	684	Open in IMG/M
3300031947\|Ga0310909_11278658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	591	Open in IMG/M
3300032001\|Ga0306922_12051700	Not Available	556	Open in IMG/M
3300032001\|Ga0306922_12223243	Not Available	528	Open in IMG/M
3300032076\|Ga0306924_10701304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1137	Open in IMG/M
3300032160\|Ga0311301_10112665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5201	Open in IMG/M
3300032160\|Ga0311301_10234726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3059	Open in IMG/M
3300032160\|Ga0311301_10354802	Not Available	2290	Open in IMG/M
3300032261\|Ga0306920_101253769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1069	Open in IMG/M
3300032898\|Ga0335072_10018555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9824	Open in IMG/M
3300033289\|Ga0310914_10338120	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300033289\|Ga0310914_10719349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	895	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.37%
Host-Associated	Host-Associated	18.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.39%
Arthropoda	Host-Associated → Arthropoda	11.76%
Plants	Host-Associated → Plants	5.88%
Aquatic	Environmental → Aquatic	0.98%
Fungi	Host-Associated → Fungi	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.41%
Digestive System	Host-Associated → Arthropoda → Digestive System	11.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.90%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Peat	Environmental → Terrestrial → Peat	0.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%
Mycelium	Host-Associated → Fungi → Mycelium	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.69%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	11.76%
Loam	Environmental → Terrestrial → Soil → Loam	10.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.51%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.73%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	11.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010369	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 3)	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100328542	3300001471	Forest Soil	MHRPFVTTVKFENDRGDALRLNYAVAAVDTAGAKAELERRFLDLEVDDYTIENIVEASVLQARMLRLPPRCIMLLA*
JGI12659J15293_100293193	3300001546	Forest Soil	MAAQRSDMLMHRPFVTTVKFENDRGDALRLNYAVAAVDTAGAKAELERRFLDLEVDDYTIENIVEASVLQARMLRLPPRCIMLLA*
JGIcombinedJ51221_100709323	3300003505	Forest Soil	MHRPFVTTVKFENENGGALRLHYAVAAADTADAKAELERRFLDLEVDHYTIERIVEATTLQARMLKLPPRCVMLLA*
JGIcombinedJ51221_102807662	3300003505	Forest Soil	MAAQRSDMLMHRPFVTTVKFENDRGDALRLNYAVAAVDTAGAKAELERRFLDLEVDDYTIENIVEASVLQARMLRLPP
Ga0066388_1045293842	3300005332	Tropical Forest Soil	MHRPFVTTVKFENEDGGVMRIEYAVAAVDATDAKTELERRFLDLEVDRYTIERIVEATTLQARMLKLPPRCVMLLA*
Ga0070659_1020238601	3300005366	Corn Rhizosphere	MHRPFVTTVKFENAAGGAMRLDYAVAATDTTAARSELERRFLDLEVNDYTIERIIEATMLQARMLKLPPHCVMLLA*
Ga0066903_1008920042	3300005764	Tropical Forest Soil	MHRPFVTTVKFETKTGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIEKIVEATTLQARMLKLTV*
Ga0066903_1044175733	3300005764	Tropical Forest Soil	MHRPFVTTVKSENENGGVMRLECAVAAVDTANAKTVLKRRFLDLEAEHYTIEKIVQATTLQARMLKLPPSCVML
Ga0066903_1063015621	3300005764	Tropical Forest Soil	MHRPFVTTVKFETKTGGVMRLEYAVAAVDTAKAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA*
Ga0111538_127733762	3300009156	Populus Rhizosphere	MHRPFVTTVKFENTAGGAMRLDYAVAATDTTAARSELERRFLDLEVNDYTIERIIEATMLQARMLKLPPHCVMLLA*
Ga0116218_10300045	3300009522	Peatlands Soil	MHRPFVTTIKFENEDGGALRLDYAVAAVDTADAKAFLDLEMDRYAIEKIVEATTLQARMLKLPCVLLA*
Ga0116218_14733032	3300009522	Peatlands Soil	VKFENEDGGVMRLEYAADAKTELERHFHYLEVNGYTIEKIVEATSLQARMLKLPLRCVMLLA*
Ga0126374_115158501	3300009792	Tropical Forest Soil	TVKFETKTGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIEKIVEATTLQARMLKLTV*
Ga0123355_106087342	3300009826	Termite Gut	MHRPFVATVKFENEYGDVVRVEYAVAAVDTIAAKTELDRRFVDLEIVGYTIERIIEATTLQAQTLNLPPRCVMLLAA*
Ga0123355_107884831	3300009826	Termite Gut	GVPMYRPFVATVKFENEGGDVVHVEYAVAAVDTTAAKSELERRFFDLEIAGYTIERIMEATTLQAQTLDLPPRCVMLLAA*
Ga0123355_110455761	3300009826	Termite Gut	MHRPFVATVRFENEDGDVVRVEYAVAAVDTIAAKTELERRFVDLEIVGYTIERIMEATTLQAQTLNLPPRCVMLLAA*
Ga0123355_117915841	3300009826	Termite Gut	RPFVATVKFENEGGDVVHVEYAVAAVDTIAAKTELERRFFDLEIAGYTIEGIMEATTLQAQMLNLPPRCVMLLAA*
Ga0123355_119086412	3300009826	Termite Gut	MYRPFVATVKFQNEDGDAVCVEYAVAAVDTIAAKTELERRFVDLEIVGYTIERIMEATTLQAQMLNLPPRCVMLLA
Ga0126380_108482202	3300010043	Tropical Forest Soil	GLDGHWWSGVPMHRPFVTTVKFENQDGGVLRLDYAVAAVDTIAAKTELERRFLDLEVDGYTIERIVEATALQARMLKLPPRCVMLLA*
Ga0126380_112660731	3300010043	Tropical Forest Soil	WSGVPMHRPFVTTVKFETKTGGVMRLEYAVAAVDTAKAKTELERRFLDLEVEHYTIEKIVEATTLQARMLKLPPSCVMLLA*
Ga0126384_109493123	3300010046	Tropical Forest Soil	EWRTNASAFVTTVKFETKTGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIEKIVEATTLQARMLKLPPSCVMLLA*
Ga0126382_108146803	3300010047	Tropical Forest Soil	MLRPFVTTVKSENENGGVMRLECAVAAVDTANAKTELERRFLDLEVEHYTIEKIVEATTLQTRMLKLTV*
Ga0123356_101508314	3300010049	Termite Gut	MHRPFVATVKFENEDGDVVRVEYAVAAVDTIAAKTELERRFVDLEIAGYTVERIMEATTLQAQMLNLPPRCVMLLAA*
Ga0123356_104748833	3300010049	Termite Gut	MYRPFVATVKFENEGGDVVHVEYAVAAVDTTAAKIELERRFFDLEIAGYTIEGIMEATTLQAQMLNLPPRCVMLLAA*
Ga0123356_111232471	3300010049	Termite Gut	MYRPFVATVKFENEGGDVVHVEYAVAAVDTTAAKSELERRFFDLEIAGYTIERIMEATTLQAQTLDLPPRCVMLLAA*
Ga0123356_111879552	3300010049	Termite Gut	LSAAPRPGDKHLLKLWKLDGRQWSGVLMHRPFVATVKFENQDGDVVCVEYAVAAVDTITAKAELERRFVDLEIVGYTIERINEATILQAQMLDLPPRCVMLLAA*
Ga0123356_128441212	3300010049	Termite Gut	MHGPFVATVKFENEYGDVVRVEYAVAAVDTIAAKTELDRRFVDLEIVGYTIERIIEATTLQAQTLNL
Ga0131853_112980342	3300010162	Termite Gut	TLWSGVLMHRPFVATVRFENEDGDVVRVEYAVAAVDTIAAKTELERRFVDLEIVGYTIERIMEATTLQAQTLNLPPRCVMLLAA*
Ga0126372_102677642	3300010360	Tropical Forest Soil	MHRPFVTTVKFQNENGGVMRLEYAVAAVDTADAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA*
Ga0126378_109468221	3300010361	Tropical Forest Soil	MHRPFVTTVKFENKNGCVMRLECAVAAVDTADAKTELERCFLDLEVDGYAIERIVEATALQARMLKLPPHCVMLLA*
Ga0126377_128133401	3300010362	Tropical Forest Soil	KFENENGGVMRLEYAVAAVDTADAKTELEGRFLDLEVEHYTIEKIVEATTLQARMLKLPPSCVMLLA*
Ga0126379_124984652	3300010366	Tropical Forest Soil	MHRPFVTTVKFENKNGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIEKIVEATTLQTRMLKLTV*
Ga0136643_105348871	3300010369	Termite Gut	MDAVECVLMHRPFVATVKFENEDGDVVRVEYAVAAVDTMSAKTELERRFVDLEIVGYTIERIIEATTLQAQTLNLPPRCVMLLAA*
Ga0105239_105528042	3300010375	Corn Rhizosphere	MTTARFENASGGAMRLDYAVAAVDTTDAKAELKRRFLDLEVNDYTIERIIEATMLQARMLKLPPHCVMLLA*
Ga0126381_1004881344	3300010376	Tropical Forest Soil	MHRPFVTIVRFENEDGDVVRVEYAVAAIDTIAAKTELERRFVDLEIAGYTIERIIEATTLQAQMLNLPPRCVMLLAA*
Ga0126381_1051580211	3300010376	Tropical Forest Soil	GDVVRVEYAVDAVDTIAAKTELERRFVDLEIVGYTIERIIEATTLQAQMLKLPPRCVMLLA*
Ga0136449_1001387045	3300010379	Peatlands Soil	MHRPFVTTVKFENENGGVLRLHYAVAAADTADATAELERRFLDLEVDHYTIERIVEATTLQARMLKLPPRCVMLLA*
Ga0136449_1002657102	3300010379	Peatlands Soil	MHRPFVTTVKFENENGGVIRLEYAVAAVDTTDAKTELERRFLDLEVDRYTIEKIVEATTLQARMLKLPPRCIMLLA*
Ga0136449_1003763471	3300010379	Peatlands Soil	TTVKFENEDGGVMRLEYAADAKTELERHFHYLEVNGYTIEKIGEATSLQARMLKLPLRCVMLLA*
Ga0126383_119515432	3300010398	Tropical Forest Soil	MHRPFVTTVKFETKTGGVIRLEYAVAAVDTAKAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA*
Ga0134127_126371211	3300010399	Terrestrial Soil	ISKCLLKLSTLDSRTEWRAMHRPFVTTVKFENAAGGAMRLDYAVAATDTTAARSELERRFLDLEVNHYTIERIIEATMLQARMLKLPPHCVMLLA*
Ga0153954_10749812	3300011418	Attine Ant Fungus Gardens	MHRPFVTTVKFENDRGDALRLDYAVAALDTADAKAELERRFLDLEVDHYTIEKIVEATTLHARMLALPPRCIMLLA*
Ga0126375_108472391	3300012948	Tropical Forest Soil	WSGVPMHRPFVTTVKLETKTGGVMRLEYAVADVDTANAKTELERRFLDLAVEHYKIEKIVEATTLQARMLKLPPSCVMLLA*
Ga0164301_111362261	3300012960	Soil	SGGAMRLDYAVAAVDTTDAKAELKRRFLDLEVNDYGIERIIEATMLQARMLKLPPRCVMLLA*
Ga0157372_122702701	3300013307	Corn Rhizosphere	ISKCLLKLSTLDSRTVWRAMHRPFVTTVKFENAAGGAMRLDYAVAATDTTAARSELERRFLDLEVNDYTIERIIEATMLQARMLKLPPHCVMLLA*
Ga0157375_125752041	3300013308	Miscanthus Rhizosphere	SRTEWRAMHRPFVTTVKFENAAGGAMRLDYAVAATDTTAARSELERRFLDLEVNDYTIERIIEATMLQARMLKLPPHCVMLLA*
Ga0182036_111777712	3300016270	Soil	MHRPFVTTVKFETKTGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Ga0182041_112346502	3300016294	Soil	MHRPFVTTVKFENENGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Ga0182033_119606992	3300016319	Soil	MHRPFVTKVKFENENGGVMRLEYAVAAVDTADAKTELERRFLDLEVEHHTIEKIVEATTLQARMLKLPPSCVMLLA
Ga0182033_122270712	3300016319	Soil	MHRPFVTTVKFENEDGGAMRLEYAVAAVDTTDAKTELERRFLDLEVDRYTIERIVEATTLQARMLKLPPRCVMLLA
Ga0182035_112256222	3300016341	Soil	MHRPFVTTVKFEGENGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Ga0182032_107224733	3300016357	Soil	MHRPFVTTVKFENENGGVMRLEYAVAAVDTADTKTELQRRFLDLEVEHYAIERIVEATTLQARMLKLPPSCVMLLA
Ga0182032_114762051	3300016357	Soil	NGGVVRLEYAVAALDAADAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Ga0182034_109504722	3300016371	Soil	MHRPFVTAVKFENEDGGVMRLEYAVAAVDATDAKTELERRFLDLEVDRYTIERIVEATTLQARMPKLPQRCVMLLA
Ga0182034_111294602	3300016371	Soil	MHPPFVTTVKFENENGGVVRLEYAVAALDAADAKTELERRFLDLEVERYTIEKIVEATTLQARMLNLPPS
Ga0182034_118476531	3300016371	Soil	MHRPFVTTAKFEGENGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Ga0182040_104795433	3300016387	Soil	MHRPFVTTVKFETKTGGVMRLEYAVAAVDTAKAKTELERRFLDLEVEHYTIEKIVEATTLQARMLKLTV
Ga0182039_102175742	3300016422	Soil	MHWIATQWGWRRPFVTTVKFENENDIVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIEKIVEATTLQARMLKLPPSCVMLLA
Ga0187783_100519116	3300017970	Tropical Peatland	MHRPFVTTVKFENEHGGVVHLDYAVAALDTADAKTELERRFLDLELNGYTIQRIVEATALQARMLKLPPRCVMLFA
Ga0187781_103240752	3300017972	Tropical Peatland	MQRPFVTTVKFENQDGGVLRLDYAVAAVDTIDAKTELERRFIDLEVDGYTIERIVEATTLQARMLKLPPRCVMLLA
Ga0187816_103293002	3300017995	Freshwater Sediment	MHRPFVTTVKFENENGGALRLDYAVAAVDTADAKAELEQRFLDLELDRYTIEKIVEATTLQARMLKLPPRYVMLLA
Ga0210403_104787242	3300020580	Soil	VTTVKFENEDGGVMRLEYAVAAVDTTDAKTELERRFLDLEVDRYTIERIVEATTLQARMLKLPPR
Ga0210395_100341723	3300020582	Soil	MHRPFVTTVKFENDRGDALRLNYAVAAVDTAGAKAELERRFLDLEVDDYTIENIVEASVLQARMLRLPPRCIMLLA
Ga0210395_108762252	3300020582	Soil	HAVHRPFVTTVKFENEDGDIVRVEYAVAAVDTSAAKTELERRFLDLEVDGYTIERIVEATTLQARMLKLPPRCVILLA
Ga0210401_101807931	3300020583	Soil	MHRPFVTTVKFENDRGDALRLNYAVAAVDTAGAKAELERRFLDLEVDDYTIENIVEASVLQARMLRLPP
Ga0210401_105140201	3300020583	Soil	MHRPFVTTVKFENENGGALRLHYAVAAADTADAKAELERRFLDLEVDHYTIERIVEATTLQARMLKLPPRCVMLLA
Ga0210401_107667702	3300020583	Soil	MHRPFVTTVKFENENGGVMRLEYAVAAVDTADARTELERRFLDLGVEHYAIERIVEATTLQARMLKLPPSCVMLLA
Ga0210405_102421152	3300021171	Soil	MHRPFVTTVKFENEDGGVMRLEYAVAAVDTTDAKTELERRFLDLEVDRYTIEKIVEATTLQARMLKLPPRCVMLLA
Ga0210405_102793864	3300021171	Soil	MHRPFVTTVKFENEHGDVARVEYAVAAVDTIDAKNELERRFLDHEIIGYTIERIIEATKLQARMLKLPPRCVMLLA
Ga0210393_114950851	3300021401	Soil	VHRPFVTTVKFENEDGDIVRVEYAVAAVDTSAAKIELERRFLDLEVDGYTIERIVEATTLQARMLKLPPRCVILLA
Ga0210383_104185413	3300021407	Soil	FVTTVKFENEDGGVIRLEYAVAAVDMTDAKTELERRFLDLEVHRYTIEKIEEATTLQARMLKLPPRCLMLLA
Ga0210384_103117023	3300021432	Soil	MHRPFVTTVKFENENGGVMRLEYAVAAVDTADARTELERRFLDLEVEHYAIERIVEATTLQARMLKLPPSCVMLLA
Ga0210390_100832781	3300021474	Soil	MHRPFVTTVKFENDRGDALRLNYAVAAVDTAGAKAELERRFLDLEVDDYTIENIVEASVLQARMLR
Ga0210390_102125562	3300021474	Soil	MHWPFVTTVKFENEDGGVIRLEYAVAAVDMTDAKTELERRFLDLEVHRYTIEKIEEATTLQARMLKLPPRCLMLLA
Ga0210398_104210522	3300021477	Soil	VHRPFVTTVKFENEDGDIVRVEYAVAAVDTSAAKTELERRFLDLEVDGYTIERIVEATTLQARMLKLPPRCVILLA
Ga0126371_123274092	3300021560	Tropical Forest Soil	QLSGVPMHRPFVTTVKFQNENGGVMRLEYAVAAVDTADAKTELERRFLALEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Ga0242676_10453511	3300022512	Soil	PMHQPFVTTVKFENEDGGVMRLEYAVSAIDTTDAKTELERRFLDLEVERYTIERIVEATTLQARMLKLPPRCVMLLA
Ga0209218_11094931	3300027505	Forest Soil	MAAQRSDMLMHRPFVTTVKFENDRGDALRLNYAVAAVDTAGAKAELERRFLDLEVDDYTIENIVEASVLQARMLRLPPRCIMLLA
Ga0209006_113580571	3300027908	Forest Soil	RGDALRLDYAVAASDTADAKAELERRFLDLEVDHYTIEKIVEATTLQARMLGLPPRCIMLLA
Ga0268264_109570411	3300028381	Switchgrass Rhizosphere	HRSISKCLLKLSTLDSRTEWRAIHRPFVTTVKFENAAGGAMRLDYAVAATDTTAARSELERRFLDLEVNDYTIERIIEATMLQARMLKLPPHCVMLLA
Ga0308309_105940663	3300028906	Soil	FENENGGALRLHYAVAAADTADAKAELERRFLDLEVDHYTIERIVEATTLQARMLKLPPRCVMLLA
Ga0302326_117873892	3300031525	Palsa	MHRPFVTTVKFENDRGDALRLDYAVAASDTADVKAELERRFLDLEVDHYTIEKIVEATTLQARMLGLPPRCIMLLA
Ga0318541_102985321	3300031545	Soil	SGIPMHRPFVTTVKFENENGGVVRLEYAVAALDAADAKTELERRFLDLEVEHYTIEKIIEATTLQARMLKLPPSCVMLLA
Ga0310915_109191221	3300031573	Soil	PFVTTVKFENENGGVMRLEYAVAAVDTADAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Ga0310686_1014487161	3300031708	Soil	MHWPFVTTVKFESEDGGVLRLDYAVAAVDIISAKAELERRFLDLEVGRYTIENIAEATTMQARMLSCIRHSQIT
Ga0307475_106939991	3300031754	Hardwood Forest Soil	MHRPFVTTVKFENEDGGVMRLEYAVAAVDTTDAKTELERRFLDLEVDRYTIERIVEATTLQARMLKPPPR
Ga0318551_109501102	3300031896	Soil	MHRPFVTTVKFENENGGVVRLEYAVAALDTPDAKTELERRFLDLEVEHHTIEKIVEATTLQARMLKLPPSCVMLLA
Ga0306923_106264862	3300031910	Soil	MHRPFVTTVKFENENGGVMRLEYAVAAVDTADAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Ga0306921_120772782	3300031912	Soil	MHRPFVTTVKFENENGGEMRVEYAVAAVDTADAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLLA
Ga0306921_127298681	3300031912	Soil	NENGGVVRLEYAVVALDAADAKTELERRFLDLEVEHYTIEKTVEATTLQARMLKLPPSCVMLLA
Ga0310916_110360382	3300031942	Soil	MHRPFVTTVKFENENGGVVRLEYAVAALDTPDAKTELERRFLDLEVEHYTIEKIVEATTLQARMLKLPPSCVMLLA
Ga0310909_112786582	3300031947	Soil	MHRPFVTTVKFENENGIVMRLEYADAAVDTANAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSCVMLL
Ga0306922_120517001	3300032001	Soil	MHRPFVTTVKFENENGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIERIVEATTLQARMLKLPPSW
Ga0306922_122232432	3300032001	Soil	MHRPFVTTVKFENEEGGVMRLEYAVAAVDTSDAKTELERRFLDLEVDRYTIERIVEATTLQARMLELPPRCVVLLA
Ga0306924_107013042	3300032076	Soil	MHRPFVTTVKFENENGGVMRLEYAVAAVDTANAKTELERRFLDLEVEHYTIEKIVEATTLQARMLKLPPSCVMLLA
Ga0311301_101126657	3300032160	Peatlands Soil	MHRPFVTTVKFENENGGVLRLHYAVAAADTADATAELERRFLDLEVDHYTIERIVEATTLQARMLKLPPRCVMLLA
Ga0311301_102347264	3300032160	Peatlands Soil	MHRPFVTTIKFENEDGGALRLDYAVAAVDTADAKAFLDLEMDRYAIEKIVEATTLQARMLKLPCVLLA
Ga0311301_103548021	3300032160	Peatlands Soil	MHRPFVTTVKFENEDGGVMRLEYAADAKTELERRFHYLEVNGYTIEKIVEATSLQARMLKLPLRCVMLLA
Ga0306920_1012537693	3300032261	Soil	MHRPFVTTVKFENEDGGLMRIEYAVAAVDTTDAKTELERRFLDLEVDRYTIERIVEATTLQARMPKLPQRCVMLLA
Ga0335072_100185557	3300032898	Soil	MHRPFVTTVKFENDRGDALRLNYAVAALDTAGAKAELERRFLDLEVDDYTIENIVEASVLQARMLRLPPRCIMLLA
Ga0310914_103381202	3300033289	Soil	MHRPFVTTVKFENENGGVVRLEYAVAALDTADAKTELERRFLDLEVEHYTIEKIIEATTLQVRMLKLPPSCVMLLA
Ga0310914_107193492	3300033289	Soil	MHRPFVTTVKFENEDGGVMRIEYAVAAVDTTDAKTELERRFLDLEVDRYTIERIVEATTLQARMPKLPQRCVMLLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences