Metagenome Family F102034

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102034
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	37 residues
Representative Sequence	ETSRIGAPYIYIYIYIYDISSLRVNDLTLILLTWRKW
Number of Associated Samples	9
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	13.73 %
% of genes from short scaffolds (< 2000 bps)	12.75 %
Associated GOLD sequencing projects	5
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (97.059 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.69% β-sheet: 0.00% Coil/Unstructured: 52.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13949	ALIX_LYPXL_bnd	0.98
PF01762	Galactosyl_T	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
All Organisms	root	All Organisms	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
cellular organisms	root	All Organisms → cellular organisms	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Polyneoptera	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Dictyoptera	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Blattodea	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Blattoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Termitoidae	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Kalotermitidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae	0.98 %
Rhinotermitidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Coptotermitinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae	0.98 %
Cryptotermitinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Cryptotermes	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes	0.98 %
Coptotermes	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.06 %
Cryptotermes secundus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus	0.98 %
Coptotermes formosanus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002238\|JGI20169J29049_11156118	Not Available	1058	Open in IMG/M
3300002238\|JGI20169J29049_11163045	Not Available	1070	Open in IMG/M
3300002238\|JGI20169J29049_11214074	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus	1173	Open in IMG/M
3300002238\|JGI20169J29049_11252069	Not Available	1270	Open in IMG/M
3300002238\|JGI20169J29049_11307543	Not Available	1463	Open in IMG/M
3300002238\|JGI20169J29049_11328992	Not Available	1567	Open in IMG/M
3300002238\|JGI20169J29049_11381398	Not Available	1973	Open in IMG/M
3300028325\|Ga0268261_10107270	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea	2497	Open in IMG/M
3300028325\|Ga0268261_10317837	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus	1372	Open in IMG/M
3300028325\|Ga0268261_10390276	Not Available	1184	Open in IMG/M
3300028325\|Ga0268261_10405504	Not Available	1150	Open in IMG/M
3300028325\|Ga0268261_10412215	Not Available	1136	Open in IMG/M
3300028325\|Ga0268261_10601702	Not Available	805	Open in IMG/M
3300028325\|Ga0268261_10669015	Not Available	702	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	100.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001343	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5	Host-Associated	Open in IMG/M
3300001466	Nasutitermes corniger midgut segment microbial community from laboratory colony in Florida, USA - Nc150M	Host-Associated	Open in IMG/M
3300001542	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C	Host-Associated	Open in IMG/M
3300002238	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1	Host-Associated	Open in IMG/M
3300002308	Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4	Host-Associated	Open in IMG/M
3300027539	Nasutitermes corniger midgut segment microbial community from laboratory colony in Florida, USA - Nc150M (SPAdes)	Host-Associated	Open in IMG/M
3300027670	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C (SPAdes)	Host-Associated	Open in IMG/M
3300027966	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300028325	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20172J14457_100895981	3300001343	Termite Gut	DLETSRIGTVCVCIYIYDISSLRVNDLTLILLPWRK*
JGI20168J15290_10158371	3300001466	Termite Gut	CDLETSRLGAPYIYIYIYDISSVRVNDLTLILLPWRK*
JGI20167J15610_100651872	3300001542	Termite Gut	SRMGAPYIYIYIYIYIYDISSLRVNDLTHILLTWRKW*
JGI20169J29049_106089081	3300002238	Termite Gut	IGAPYIYIYIYIYIYDISSLRVNDLTLMMLTWRKW*
JGI20169J29049_106904431	3300002238	Termite Gut	DLETSRIGAPYIYIYDISSPRVNDLTLILLTCRKW*
JGI20169J29049_107110452	3300002238	Termite Gut	ETSRIGAPYIYIYIYIYIYDISSLRVNDLTLIPLT*
JGI20169J29049_107143471	3300002238	Termite Gut	IGAPYIYIYIYIYIYDISSLRVNDLKLILLTWRKW*
JGI20169J29049_107175291	3300002238	Termite Gut	ETSRIGAPYIYIYIYIYDISSLRVNDLTLILLMWRK*
JGI20169J29049_107413911	3300002238	Termite Gut	RMGAPYIYIYIYIYIYDISSLKVNNLTLILLTRRKW*
JGI20169J29049_107457502	3300002238	Termite Gut	IYIYIYIYIYIYDISSLRVNDLTLILLTCKKMLS*
JGI20169J29049_107790391	3300002238	Termite Gut	LETSRMGAPYIYIYIYIYDISSLRVNDLTLILQSWRKW*
JGI20169J29049_107813112	3300002238	Termite Gut	YIYIYIYIYIYDISSLRVNDLTIILLTWRKWRANNASK*
JGI20169J29049_108052231	3300002238	Termite Gut	ETSRLGAPYIYIYIYIDDVRSLRVNDLNLILLTWRKW*
JGI20169J29049_108496792	3300002238	Termite Gut	LETSRIGAPYIYIYIYIYDISSLRVNDLTLILVTWRK*
JGI20169J29049_109427091	3300002238	Termite Gut	LETSRIGAPYIYIYIYIYDISSLRVNDLTLILLTWRKW*
JGI20169J29049_109734083	3300002238	Termite Gut	SRIGVPYIYIYIYIYIYDISSLRVNDLTLILLTWRKC*
JGI20169J29049_109767963	3300002238	Termite Gut	KGAPYIYIYIYIYIYNISSLRVNDLNLILLTWRKW*
JGI20169J29049_110142743	3300002238	Termite Gut	ETSRMGAPYIYIYIYIYIYDISSVMVNNLTLILLT*
JGI20169J29049_110166021	3300002238	Termite Gut	LETSRIGAPYIYIYIYDIRSLRVNDSTLILLPWRKW*
JGI20169J29049_110486881	3300002238	Termite Gut	DLETSRIGAPYIYIYIYIYDISSLRVNDLTLILLT*
JGI20169J29049_110490421	3300002238	Termite Gut	ETSRIGAPYIYIYIYIYIYDISSLRVNSLHSVIRTWRMGEVLK*
JGI20169J29049_111549651	3300002238	Termite Gut	RIGAPYIYIYIYIYDISSLRVNDLTLILLKWRKW*
JGI20169J29049_111561181	3300002238	Termite Gut	ISSLYIYIYIYIYIYDISSLRVNDLTLILLMFRKW*
JGI20169J29049_111630451	3300002238	Termite Gut	IGAPYIYIYIYIYIYDISSLRVNDFTLILLTWRKL*
JGI20169J29049_111800911	3300002238	Termite Gut	SRMGAPYIYIYIYIYDISSLRVNDLTFILLTWKNG*
JGI20169J29049_111822341	3300002238	Termite Gut	SRIGAPYIYIYIYIYIYDISSLKVNNLTLILLLTWKKW*
JGI20169J29049_112140741	3300002238	Termite Gut	SRMGAPYIYIYIYIYDISSLEVNNLTLILLTWKKW*
JGI20169J29049_112162221	3300002238	Termite Gut	SRIGAPYIYIYIYIYDISSLRVNDLTLILLTWTKR*
JGI20169J29049_112451424	3300002238	Termite Gut	ETSRIGAPYIYIYIYDIRSLRVNDLTLILLPWRKW*
JGI20169J29049_112520691	3300002238	Termite Gut	SRIGAPYIYIYIYIYDIKSLRVNDLSLILLTWRKW*
JGI20169J29049_112973541	3300002238	Termite Gut	TSRIGAPYIYIYIYIYIYDISSLRVNDLTLIQLT*
JGI20169J29049_113058692	3300002238	Termite Gut	RIGAPYIYIYIYIYIYDISSLKVNDLTLILLKWRK*
JGI20169J29049_113075435	3300002238	Termite Gut	KNGCSIYIYIYIYIYDISSLKVNNLTLIQLTWRKW*
JGI20169J29049_113075671	3300002238	Termite Gut	DLETSRMGAPYIYIYIYIYDISSLRVNDLTLIQLTWRKW*
JGI20169J29049_113289924	3300002238	Termite Gut	LRLLMLYIYIYIYIYIYDISSLRVNDLTLILLTWKKW*
JGI20169J29049_113304345	3300002238	Termite Gut	DLETSRICAPYIYIYIYIYIYDIRSLSVNDLTIILLTWRKW*
JGI20169J29049_113349541	3300002238	Termite Gut	DLETSRIGAPYIYIYDIRNLRVNDLTLILLTCEKMVS*
JGI20169J29049_113445572	3300002238	Termite Gut	NRRYIYIYIYIYIYDISSLRVNDLNLILLTWREW*
JGI20169J29049_113590074	3300002238	Termite Gut	RVGAPYIYIYIYIYDISSLRVNDLTLILLTWRKW*
JGI20169J29049_113761024	3300002238	Termite Gut	RIGAPYIYIYIYIYDISSLRVNDLTLILLTWREW*
JGI20169J29049_113813981	3300002238	Termite Gut	TSRIGAPYIYIYIYIYDISSLRVNDLILILLTWRKW*
JGI20169J29049_114120314	3300002238	Termite Gut	DLETSRIGAPYIYIYIYIYDISSLRVNDLTLIRLKWRKW*
JGI20169J29049_114228884	3300002238	Termite Gut	ETSRIGAPYIYIYIYIYDISSLRVNDLTLILLSSKKW*
JGI20171J29575_116139872	3300002308	Termite Gut	LETSRIGAPYIYIYIYIYIYDISSLRVNDLTLILLTWRKW*
JGI20171J29575_116651321	3300002308	Termite Gut	DLETSRIGAPYIYVYIYIYIYDIRSLRVNDLTLILLTCRW*
JGI20171J29575_123837561	3300002308	Termite Gut	DLETSRMGAPYIYIYIYIYEISRLKVNDLILILLMWRKW*
JGI20171J29575_124672193	3300002308	Termite Gut	ETSRIGAPYIYIYIYIYIYDISSLKVNDLTLNLLTWKKWNS*
Ga0209424_11785661	3300027539	Termite Gut	RIGAPYIYIYIYIYIYDISSLRVNDLTLILLTCRKW
Ga0209424_13606161	3300027539	Termite Gut	CDLETSRLGAPYIYIYIYDISSVRVNDLTLILLPWRK
Ga0209423_102335781	3300027670	Termite Gut	TSRMGAPYIYIYIYIYDISRIRVNDLTLILLTWRKW
Ga0209423_102641281	3300027670	Termite Gut	RIGAPYIYIYIYIYIYDIRSLRVNDITLILLTWIKW
Ga0209423_102694172	3300027670	Termite Gut	DLETSRIGVPYNIYIYIYIYDISSLRVNDLTLILLTWRKW
Ga0209423_102761421	3300027670	Termite Gut	SRIGAPYIYIYIYIYDISSLRVNDLNLILLPWRKW
Ga0209423_103294881	3300027670	Termite Gut	RIGAPYIYIYIYIYIYDISSLRVNDLTIILLTWRKWFAPNNASK
Ga0209423_105025001	3300027670	Termite Gut	APYIYIYIYIYIYDISSLRVNDLTLILLTWRPLTC
Ga0209738_101801081	3300027966	Termite Gut	LETSRIGAPYIYIYIYIYDISSLRVNDLTRLLIVAIAEAY
Ga0209738_101849141	3300027966	Termite Gut	SRIGAPYIYIYIYIYIYDISSLRVNDLTLILLTWRK
Ga0209738_102144132	3300027966	Termite Gut	RMGAPYIYIYIYIYIYDISSLRVNVLNKTIYLTKKWRKG
Ga0209738_102230421	3300027966	Termite Gut	RIGAPYIYIYIYIYIYDISSLRVNDLTLILPTWRIW
Ga0209738_102696111	3300027966	Termite Gut	DLETSKIRAPYIYIYDIRSLRFNDLTLILLTWRKR
Ga0209738_104377421	3300027966	Termite Gut	VVMCDLETSRIGTVCVCIYIYDISSLRVNDLTLILLPWRK
Ga0209738_105150881	3300027966	Termite Gut	KTSRIGAPYIYIYIYIYDISSLRVNDLTLILLTRRKW
Ga0268261_100161271	3300028325	Termite Gut	RIGALYIYIYIYIYIYDISSLRVNDLTLILLTWRNW
Ga0268261_100849001	3300028325	Termite Gut	DLETSRMGAPYIYIYIYIYDISSLRVNDLTLILLTWRKL
Ga0268261_100998591	3300028325	Termite Gut	RIGAPYIYIYIYIYIYDISSLRVNDLTLILLTWGKW
Ga0268261_101046471	3300028325	Termite Gut	ETSRIGAPYIYIYIYIYIYDISSLKVNDLTLILLTWRK
Ga0268261_101072701	3300028325	Termite Gut	RIGAPYIYIYIYIYDISSLKVNDLTLILLTCEKMVSS
Ga0268261_101576381	3300028325	Termite Gut	ETSRIGAPYIYIYIYIYDISSLRVNDLILILLTWRKW
Ga0268261_101797431	3300028325	Termite Gut	ADLETSRIGAPYIYIYIYIYIYDISSLRVNDLTLILLTWRKW
Ga0268261_102107881	3300028325	Termite Gut	RMGAPYIYIYIYIYIYDISSLKVNNLTLILLKWRKW
Ga0268261_102280132	3300028325	Termite Gut	VCDLETSRICAPYIYIYIYIYIYDVSSLGVIDLTLILLTWRKW
Ga0268261_102884861	3300028325	Termite Gut	TSRMGAPYIYIYIYIYDISSLRVNDLTLIQLTWRKW
Ga0268261_102923601	3300028325	Termite Gut	RMGAPYIYIYIYIYIYDISRLRVNVLTFILLTWRKW
Ga0268261_103178372	3300028325	Termite Gut	IGALYIYIYIYIYIYDIISLRVNNFTLILLTWRKW
Ga0268261_103194421	3300028325	Termite Gut	TSRIGAPYIYIYIYIYDIRSLRVNDLTLILLTWRKW
Ga0268261_103902761	3300028325	Termite Gut	NRRSIYIYIYIYIYIYDISSLRVNDLTLILLTWKKW
Ga0268261_103984631	3300028325	Termite Gut	ETSRIGAPYIYIYIYIYDISSLRVNDLTLILLKWRK
Ga0268261_104055041	3300028325	Termite Gut	ETSRIGAPYIYIYIYIYDISSLRVNDFTLILLTWRKW
Ga0268261_104122151	3300028325	Termite Gut	LRLLMSYIYIYIYIYIYDISSLRVNDLTLILLTWRKW
Ga0268261_104320061	3300028325	Termite Gut	SRMGAPYIYIYIYIYIYDISSLKVNDSTLILVKWRKW
Ga0268261_104473321	3300028325	Termite Gut	RIGAPYIYIYIYIYIYDISSLRVNDLTLILLTWRKW
Ga0268261_104541911	3300028325	Termite Gut	ETSRIGAPYIYIYIYIYDISSLRVNDLTLILLTRRKW
Ga0268261_104662521	3300028325	Termite Gut	ETSRMGAPYIYIYIYIYDISSLRVNDLTLILLTWRKW
Ga0268261_105039871	3300028325	Termite Gut	IGAPYIYIYIYIYIYDISSLRVNDLNLILLTWKKW
Ga0268261_105271351	3300028325	Termite Gut	VVCDLETSRIGAPYIYIYIYIYDISSLRVNDLTLILLT
Ga0268261_105439501	3300028325	Termite Gut	SRIGAPYIYIYIYIYDISSLRVNDLTLIVLTWRKW
Ga0268261_105816751	3300028325	Termite Gut	SRIGDTYIYIYIYIYIYDISSLRVNDLTLILLTWRKW
Ga0268261_105846171	3300028325	Termite Gut	ETSRIGAPYIYIYIYIYDISSLRVNDLTLILLTWRKW
Ga0268261_105920771	3300028325	Termite Gut	RIGAPYIYIYIYIYIYDISSLKDDDLTLILLTWRKW
Ga0268261_105942271	3300028325	Termite Gut	TSRIGAPYIYIYIYIYDIRSLRVNDLTLILLTWRKL
Ga0268261_106017021	3300028325	Termite Gut	SRIGAPYIYIYIYIYIYDIISLRVNNLTLILLTWRKW
Ga0268261_106147203	3300028325	Termite Gut	ETSRIGAPYIYIYIYIYDISSLRVNDLTLILLMWRKW
Ga0268261_106193941	3300028325	Termite Gut	SRMGAPYIYIYIYIYIYDISSLKVSNLTLILLMWRKW
Ga0268261_106256042	3300028325	Termite Gut	DLETSRIGAPYIYIYIYIYDISSLRVNDLTLIVLTWRKW
Ga0268261_106317451	3300028325	Termite Gut	ETSRIGAPYIYIYIYIYDISSLRVNDLTLILLTWRKWKAPNNASK
Ga0268261_106358331	3300028325	Termite Gut	APHIHIYIYIYIYIYIYDISSLRVNDLNLILLTWRK
Ga0268261_106376551	3300028325	Termite Gut	TSRIGGPYIYIYIYIYDISSLRVNDLTLILLTWRKW
Ga0268261_106496311	3300028325	Termite Gut	DLETSRIGAPYIYIYIYIYDISSLRVNDLTLILLT
Ga0268261_106690151	3300028325	Termite Gut	SFTVCVCIYIYIYIYDVSSLRVNDLTLILLTWRKW
Ga0268261_107463412	3300028325	Termite Gut	TSRIGAPYIYIYIYIYDISSLRVNDLTLILLTWRK
Ga0268261_107608371	3300028325	Termite Gut	IGAPYIYIYIYIYIYDISSLRVNDLSLILLTWRKC
Ga0268261_107732931	3300028325	Termite Gut	VCDLETSRMGAPYIYIYIYIYDISSLRVNDLTLILLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102034

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences