NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F102082

Metagenome Family F102082

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F102082
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 71 residues
Representative Sequence MYELFATFCILVNGVPECTTYSDTEKQIYKDLKACEERAEYRFYETAGGFMQYNIPFESIVIGCKGGEDS
Number of Associated Samples 72
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 14.71 %
% of genes near scaffold ends (potentially truncated) 25.49 %
% of genes from short scaffolds (< 2000 bps) 70.59 %
Associated GOLD sequencing projects 61
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (74.510 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(37.255 % of family members)
Environment Ontology (ENVO) Unclassified
(94.118 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(97.059 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 34.29%    β-sheet: 20.00%    Coil/Unstructured: 45.71%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF13578Methyltransf_24 53.92
PF00268Ribonuc_red_sm 3.92
PF02195ParBc 3.92
PF05488PAAR_motif 2.94
PF05050Methyltransf_21 1.96
PF02653BPD_transp_2 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0208Ribonucleotide reductase beta subunit, ferritin-like domainNucleotide transport and metabolism [F] 3.92
COG4104Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretionIntracellular trafficking, secretion, and vesicular transport [U] 2.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.51 %
All OrganismsrootAll Organisms25.49 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10283202Not Available504Open in IMG/M
3300000116|DelMOSpr2010_c10098329Not Available1110Open in IMG/M
3300000117|DelMOWin2010_c10066116Not Available1485Open in IMG/M
3300000167|SI39nov09_120mDRAFT_c1093915Not Available515Open in IMG/M
3300000167|SI39nov09_120mDRAFT_c1094198Not Available513Open in IMG/M
3300001450|JGI24006J15134_10006613Not Available5943Open in IMG/M
3300001450|JGI24006J15134_10081710Not Available1207Open in IMG/M
3300001450|JGI24006J15134_10175556Not Available677Open in IMG/M
3300001460|JGI24003J15210_10005465All Organisms → cellular organisms → Bacteria → Proteobacteria5397Open in IMG/M
3300001460|JGI24003J15210_10008432Not Available4263Open in IMG/M
3300001460|JGI24003J15210_10013870All Organisms → Viruses → Predicted Viral3189Open in IMG/M
3300001460|JGI24003J15210_10013895All Organisms → Viruses → Predicted Viral3185Open in IMG/M
3300001460|JGI24003J15210_10014010Not Available3171Open in IMG/M
3300001460|JGI24003J15210_10015078Not Available3036Open in IMG/M
3300001460|JGI24003J15210_10021931Not Available2419Open in IMG/M
3300001460|JGI24003J15210_10038400All Organisms → Viruses → Predicted Viral1684Open in IMG/M
3300001472|JGI24004J15324_10003856Not Available5833Open in IMG/M
3300003478|JGI26238J51125_1073603Not Available665Open in IMG/M
3300004097|Ga0055584_100366961All Organisms → Viruses → Predicted Viral1486Open in IMG/M
3300004097|Ga0055584_100887970Not Available933Open in IMG/M
3300004110|Ga0008648_10080940Not Available912Open in IMG/M
3300005430|Ga0066849_10015945All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium3055Open in IMG/M
3300005521|Ga0066862_10132240Not Available843Open in IMG/M
3300006735|Ga0098038_1010620All Organisms → Viruses → Predicted Viral3611Open in IMG/M
3300006928|Ga0098041_1310188Not Available501Open in IMG/M
3300006947|Ga0075444_10261699Not Available677Open in IMG/M
3300007229|Ga0075468_10137233Not Available748Open in IMG/M
3300007276|Ga0070747_1284285Not Available570Open in IMG/M
3300009071|Ga0115566_10745062Not Available541Open in IMG/M
3300009420|Ga0114994_10062871Not Available2546Open in IMG/M
3300009422|Ga0114998_10158623Not Available1087Open in IMG/M
3300009428|Ga0114915_1121614Not Available760Open in IMG/M
3300009476|Ga0115555_1190365Not Available848Open in IMG/M
3300009508|Ga0115567_10305021Not Available998Open in IMG/M
3300009512|Ga0115003_10175682Not Available1294Open in IMG/M
3300009512|Ga0115003_10585263Not Available651Open in IMG/M
3300009593|Ga0115011_11586885Not Available582Open in IMG/M
3300010883|Ga0133547_11289087All Organisms → Viruses → Predicted Viral1388Open in IMG/M
3300011253|Ga0151671_1075671All Organisms → Viruses → Predicted Viral1299Open in IMG/M
3300017697|Ga0180120_10023388Not Available2884Open in IMG/M
3300017697|Ga0180120_10202957Not Available820Open in IMG/M
3300017725|Ga0181398_1071890Not Available830Open in IMG/M
3300017727|Ga0181401_1150171Not Available568Open in IMG/M
3300017734|Ga0187222_1066262Not Available830Open in IMG/M
3300017734|Ga0187222_1142128Not Available535Open in IMG/M
3300017743|Ga0181402_1140951Not Available613Open in IMG/M
3300017744|Ga0181397_1082751Not Available855Open in IMG/M
3300017750|Ga0181405_1056928Not Available1023Open in IMG/M
3300017750|Ga0181405_1088034Not Available789Open in IMG/M
3300017751|Ga0187219_1189580Not Available573Open in IMG/M
3300017752|Ga0181400_1130645Not Available721Open in IMG/M
3300017755|Ga0181411_1209249Not Available546Open in IMG/M
3300017762|Ga0181422_1144749Not Available730Open in IMG/M
3300017765|Ga0181413_1175826Not Available642Open in IMG/M
3300017770|Ga0187217_1039188Not Available1668Open in IMG/M
3300017781|Ga0181423_1010821All Organisms → Viruses → Predicted Viral3841Open in IMG/M
3300017782|Ga0181380_1125253Not Available883Open in IMG/M
3300017783|Ga0181379_1056801All Organisms → Viruses → Predicted Viral1487Open in IMG/M
3300020385|Ga0211677_10326368Not Available609Open in IMG/M
3300020428|Ga0211521_10025843Not Available3287Open in IMG/M
3300020428|Ga0211521_10042310Not Available2403Open in IMG/M
3300020438|Ga0211576_10144927Not Available1288Open in IMG/M
3300020438|Ga0211576_10271732Not Available886Open in IMG/M
3300020438|Ga0211576_10497158Not Available616Open in IMG/M
3300020438|Ga0211576_10543750Not Available583Open in IMG/M
3300020463|Ga0211676_10579710Not Available579Open in IMG/M
3300020469|Ga0211577_10083251All Organisms → Viruses → Predicted Viral2247Open in IMG/M
3300020469|Ga0211577_10571332Not Available677Open in IMG/M
3300021365|Ga0206123_10355101Not Available612Open in IMG/M
3300021957|Ga0222717_10051672Not Available2661Open in IMG/M
(restricted) 3300022931|Ga0233433_10250122Not Available750Open in IMG/M
(restricted) 3300024299|Ga0233448_1180274Not Available531Open in IMG/M
3300025099|Ga0208669_1015869All Organisms → Viruses → Predicted Viral2003Open in IMG/M
3300025120|Ga0209535_1001791All Organisms → cellular organisms → Bacteria14268Open in IMG/M
3300025120|Ga0209535_1002150All Organisms → cellular organisms → Bacteria → Proteobacteria12900Open in IMG/M
3300025120|Ga0209535_1002441All Organisms → cellular organisms → Bacteria → Proteobacteria12121Open in IMG/M
3300025120|Ga0209535_1014363All Organisms → Viruses → Predicted Viral4261Open in IMG/M
3300025120|Ga0209535_1020834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique3321Open in IMG/M
3300025120|Ga0209535_1035560All Organisms → Viruses → Predicted Viral2294Open in IMG/M
3300025120|Ga0209535_1052857All Organisms → Viruses → Predicted Viral1716Open in IMG/M
3300025120|Ga0209535_1192572Not Available584Open in IMG/M
3300025120|Ga0209535_1202943Not Available555Open in IMG/M
3300025120|Ga0209535_1211061Not Available533Open in IMG/M
3300025137|Ga0209336_10039939All Organisms → Viruses → Predicted Viral1516Open in IMG/M
3300025168|Ga0209337_1221212Not Available750Open in IMG/M
3300025276|Ga0208814_1093066Not Available773Open in IMG/M
3300025652|Ga0208134_1085359All Organisms → Viruses904Open in IMG/M
3300025676|Ga0209657_1017204All Organisms → Viruses → Predicted Viral3109Open in IMG/M
3300025770|Ga0209362_1243208Not Available585Open in IMG/M
3300025806|Ga0208545_1101605Not Available751Open in IMG/M
3300025881|Ga0209309_10254080Not Available815Open in IMG/M
3300025894|Ga0209335_10449724Not Available505Open in IMG/M
3300026257|Ga0208407_1012779All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium3119Open in IMG/M
3300027522|Ga0209384_1067956Not Available912Open in IMG/M
3300027788|Ga0209711_10084590Not Available1641Open in IMG/M
3300027813|Ga0209090_10025967Not Available3394Open in IMG/M
3300028177|Ga0257122_1172696Not Available550Open in IMG/M
3300028197|Ga0257110_1324558Not Available546Open in IMG/M
3300028706|Ga0257115_1033859Not Available1665Open in IMG/M
3300029448|Ga0183755_1004423Not Available6749Open in IMG/M
3300029448|Ga0183755_1011280All Organisms → Viruses → Predicted Viral3478Open in IMG/M
3300031510|Ga0308010_1114454All Organisms → Viruses → Predicted Viral1033Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine37.25%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater16.67%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine13.73%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine5.88%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.94%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.94%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean1.96%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine1.96%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.96%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.98%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.98%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.98%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.98%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.98%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000167Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 120mEnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300003478Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004110Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNAEnvironmentalOpen in IMG/M
3300005430Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69EnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011253Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeateEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017734Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300020385Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020463Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022931 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MGEnvironmentalOpen in IMG/M
3300024299 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_150_MGEnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025676Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025770Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300025894Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)EnvironmentalOpen in IMG/M
3300026257Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300028177Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_120EnvironmentalOpen in IMG/M
3300028197Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10mEnvironmentalOpen in IMG/M
3300028706Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_100mEnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1028320223300000101MarineMFKLFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDIPFESITIGCKGEENS*
DelMOSpr2010_1009832913300000116MarineRGLAHLATERALNTHMFKLFASMCILVNGILECTTYSDNKAEIYKTLTECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS*
DelMOWin2010_1006611623300000117MarineMYELFATFCILVNGVPECTTYSDTEKQIYKDLKACEERAEYRFYETASGFMQYNIPFESIVIGCKGGEDS*
SI39nov09_120mDRAFT_109391513300000167MarineNIYMYELFATFCILVNGVPECTTYSDNDKQIYKDLKTCEERAEVRFYETAGGFMQYNIPFESIVVGCKGGEES*
SI39nov09_120mDRAFT_109419813300000167MarineVHLATERTTFTLNIYMYELFATFCILVNGVPECTTYSDNQKQVYKDLKTCEERAEYRFYETAGGFMQYNIPFESIVIGCEGGDES*
JGI24006J15134_1000661363300001450MarineMYELFATMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADVPFESIVIGCKGGEES*
JGI24006J15134_1008171013300001450MarineMFKLFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETVGGFMMADVPFESIEIGCKGQEDS*
JGI24006J15134_1017555623300001450MarineMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDIPFESITIGCKGEENS*
JGI24003J15210_10005465103300001460MarineLAHLATERALNTYMYELFATMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADVPFESIVIGCKGGEES*
JGI24003J15210_1000843213300001460MarineLAHLATERALNTYMYELFATMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADIPFESIVIGCKGGEES*
JGI24003J15210_1001387053300001460MarineMFKLFASMCILVNGIPECTTYSDNKAEIFQTLIECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS*
JGI24003J15210_1001389513300001460MarineMYELFATFCILVNGVPECTTYSDTQKQIYKDLKTCEERAEYRFYETAGGFIQYNIPFESIVIGCKGGEDS*
JGI24003J15210_1001401053300001460MarineMYKLFATFCLLVNGVPECTTYSDNDKQIYKDLKTCEERAEVRFYETAYGFMQYNIPFETIIIGCKGGKES*
JGI24003J15210_1001507823300001460MarineMYELFATFCILVNGVPECTTYSDTEKQIYKDLKTCEERAEVRFYETAGGFMQYNIPFETIIIGCKGGENS*
JGI24003J15210_1002193143300001460MarineNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDIPFESITIGCKGEENS*
JGI24003J15210_1003840043300001460MarineMCILVNGIPECTTYSDNKAEIYKTLTECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS*
JGI24004J15324_1000385673300001472MarineMYELFATMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADIPFESIVIGCKGGEES*
JGI26238J51125_107360323300003478MarineMYELFATFCILVNGVPECTTYSDNQKQVYKDLKTCEERAEYRFYETAGGFMQYNIPFESIVIGCEGGDES*
Ga0055584_10036696133300004097Pelagic MarineMYELFATFCILVNGVPECTTYSDTDKKIYKDLQTCEERAEYRFYETAGGFMQYNIPFESIVIGCKGGEDS*
Ga0055584_10088797023300004097Pelagic MarineLQQNGPHFSLNICMYELFATFCILVNGVPECTTYSDTEKQVYKDLQTCEERAEYRFYETADGFMQYDIPFESIVIGCKGGDDS*
Ga0008648_1008094013300004110MarineMYELFATFCILVNGVPECTTYSDNDKQIYKDLKTCEERAEVRFYETAGGFMQYNIPFESIVVGCKGGEES*
Ga0066849_1001594553300005430MarineGHLNTHMYELFATFCILVNGVPECTTYSDTQKQIYNDLKTCEERAEVRFYETVDGFMQYGIPIESIVIGCKGGEES*
Ga0066862_1013224023300005521MarineMGHLNTHMYELFATFCILVNGVPECTTYSDTQKQIYNDLKTCEERAEVRFYETVDGFMQYGIPIESIVIGCKGGEES*
Ga0098038_101062013300006735MarineMYELFATFCILVNGVPECTTYSDTEKQVYKDLKTCEERAEHRFYETAGGFMQYNIPFESIVIGCKGGEES*
Ga0098041_131018813300006928MarineMYELFATMCILVNGVPECTTYSDTQKQIYNDLKTCEERAEVRFYETVDGFMQYGIPIESIVIGCKGGEES*
Ga0075444_1026169923300006947MarineMYELFATFCIMVNGVPECTTYSDTQKMIYKDLKTCEERAEYRFYETAGGFIQYNIPFETIVIGCKGGEDS*
Ga0075468_1013723313300007229AqueousMYELFATFCILVNGVPECTTYSDTEKQIYKDLKACEERAEYRFYETAGGFMQYNIPFESIVIGCKGGEDS*
Ga0070747_128428523300007276AqueousPPCNRTGLKYSMFKLFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDIPFESITIGCKGEENS*
Ga0115566_1074506223300009071Pelagic MarineMYELFATFCVLVNGVPECTTYSDTEKQVYKDLKTCEERAEHRFYETAGGFMQYNIPFESIVVGCKGGEES*
Ga0114994_1006287143300009420MarineMFKLVATMCLLVNGVPECITYSDSKAELFKTIVECDQKAEVRFYETMAGFMKYDIPFQSITIGCKNDKDS*
Ga0114998_1015862323300009422MarineMYELFATFCILVNGVPECTTYSDTQKMIYKDLKTCEERAEYRFYETAGGFIQYNIPFETIVIGCKGGEDS*
Ga0114915_112161423300009428Deep OceanIYMYELFATFCIMVNGVPECTTYSDTQKMIYKDLKTCEERAEYRFYETAGGFIQYNIPFETIVIGCKGGEDS*
Ga0115555_119036523300009476Pelagic MarineLNIYMYELFATFCVLVNGVPECTTYSDTEKQVYKDLKTCEERAEHRFYETAGGFMQYNIPFESIVVGCKGGEES*
Ga0115567_1030502113300009508Pelagic MarineMYELFATFCILVNGVPECTTYSDTEKQVYKDLQTCEERAEYRFYETADGFMQYDIPFESIVIGCKGGDDS*
Ga0115003_1017568233300009512MarineMFKLVATMCLLVNVVPECITYSDSKAELFKTIVECDQKAEVRFYETMAGFMKYDIPFQSITIGCKNDKDS*
Ga0115003_1058526313300009512MarineMFKMFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDIPFESITIGCKGEENS*
Ga0115011_1158688513300009593MarineMYELFATMCILVNGVPECTTYSDNRKQIYNDLKTCEEKAEVRFYETVGGFMQYEIPFKSIIIGCKGGEDS*
Ga0133547_1128908733300010883MarineMFKLFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDIPFEKITIGCKGGEDS*
Ga0151671_107567123300011253MarineMFKLFATMCILVNGIPECTTYSDNKAEIFQTLIECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS*
Ga0180120_1002338843300017697Freshwater To Marine Saline GradientMYELFATFCILVNGVPECTTYSDTEKQIYKDLKACEERAEYRFYETASGFMQYNIPFESIVIGCKGGEDS
Ga0180120_1020295723300017697Freshwater To Marine Saline GradientMFKLFASMCILVNGILECTTYSDNKAEIYKTLTECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS
Ga0181398_107189023300017725SeawaterLQQNGPFSLNIYMYELFATFCILVNGVPECTTYSDTDKKIYKDLQTCEERAEYRFYETAGGFMQYNIPFESIVIGCKGGEDS
Ga0181401_115017113300017727SeawaterMYELFATFCILVNGVPECTTYSDTQEQVYKDLKACEERAEYRFYETASGFMQYNIPFESIVIGCKGGKDS
Ga0187222_106626213300017734SeawaterLQQNGPHFSLNICMYELFATFCILVNGVPECTTYSDNEKQVYKDLQTCEERAEYRFYETADGFMQYDIPFESIVIGCKGGDDS
Ga0187222_114212813300017734SeawaterMYELFATMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADIPFESIVVGCKGGEES
Ga0181402_114095113300017743SeawaterNGIPECTTYSDNKAEIFQTLIECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS
Ga0181397_108275123300017744SeawaterMFKLFASMCILVNGIPACTTYSDNKAEIFQTLIECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS
Ga0181405_105692833300017750SeawaterATMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADVPFESIVIGCKGGEES
Ga0181405_108803423300017750SeawaterCILVNGIPECTTYSDNKAEIFQTLIECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS
Ga0187219_118958013300017751SeawaterMFKLFATMCIQVNGVPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDIPFESITIGCKGEENS
Ga0181400_113064523300017752SeawaterLNIYMYELFATFCILVNGVPECTTYSDTQEQVYKDLKACEERAEYRFYETAGGFMQYNIPFESIVIGCKGGKDS
Ga0181411_120924923300017755SeawaterMVHLATERTTLFLVNIHMYELFATFCILVNGVPECTTYSDTEKQVYKDLKACEERAEYRFYETAGGFMQYNIPFESIVIGCKGGKDS
Ga0181422_114474923300017762SeawaterVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADVPFESIVIGCKGGEES
Ga0181413_117582623300017765SeawaterMYELFATMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADVPFESIVIGCKGGEES
Ga0187217_103918813300017770SeawaterMYELFATFCILVNGVPECTTYSDNEKQVYKDLKTCEERAEYRFYETAAGFIQYNIPFESIVI
Ga0181423_101082173300017781SeawaterTLNIYMYELFATFCILVNGVPECTTYSDNQKQVYKDLKTCEEKAEYRFYETAGGFMQYNIPFESIVIGCKGGDES
Ga0181380_112525323300017782SeawaterMYELFATFCILVNGVPECTTYSDTEKQVYKDLQTCEERAEYRFYETADGFMQYDIPFESIVIGCKGGDDS
Ga0181379_105680133300017783SeawaterLQQNGPHFSLNICMYELFATFCILVNGVPECTTYSDTEKQVYKDLQTCEERAEYRFYETADGFMQYDIPFESIVIGCKGGDDS
Ga0211677_1032636823300020385MarineMVHLATERTTLFIKYIHMYELFATFCILVNGVPECTTYSDNEKQVYKDLQTCEERAEYRFYETAGGFLQYNIPFESIVIGCKGGEDS
Ga0211521_1002584323300020428MarineLAHLATERALNTYMYELFATMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADVPFESIVIGCKGGEES
Ga0211521_1004231043300020428MarineMYELFATFCILVNGVPECTTYTDTEKQVYKDLKTCEERAEYRFYETAAGFIQYNIPFESIVIGCKGGEDS
Ga0211576_1014492723300020438MarineMYELFATFCILVNGVPECTTYSDTEKQIYKDLKTCEERAEYRFYETAGGFMQYNIPFETIIIGCKGGEDS
Ga0211576_1027173223300020438MarinePPCNRTGLKYSMFKLFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFISANIPFESITIGCKGGEDS
Ga0211576_1049715813300020438MarineMYELFATFCILVNGVPECTTYSDTQEQVYKDLKACEERAEYRFYETAGGFMQYNIPFESIVIGCKGGKDS
Ga0211576_1054375023300020438MarineMVHLATERTTLFIKYIHMYELFATFCILVNGVPECTTYSDNEKQVYKDLKTCEERAEYRFYETADGFLRYDIPFESIIIGCKGGEES
Ga0211676_1057971013300020463MarineFRGLAHLATERALNTYMYELFATMCILVNGVSECTTFADTQDQIYKELRACEERAEVRFYETLSGFMMADIPFESIVIGCEKLPD
Ga0211577_1008325113300020469MarineLVHLATERTTFTLNIYMYELFATFCILVNGVPECTTYSDNQKQVYKDLKTCEEKAEYRFYETAGGFMQYNIPFESIVIGCKGGDES
Ga0211577_1057133213300020469MarineMFKLFASMCILVNGIPECTTYSDNKAEIFQTLIECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS
Ga0206123_1035510123300021365SeawaterMYELFATFCVLVNGVPECTTYSDTEKQVYKDLKTCEERAEHRFYETAGGFMQYNIPFESIVVGCKGGEES
Ga0222717_1005167243300021957Estuarine WaterMYELFATFCILVNGVPECTTYSDTDKKIYKDLQTCEERAEYRFYETAGGFMQYNIPFESIVIGCKGGEDS
(restricted) Ga0233433_1025012223300022931SeawaterMYELFATFCILVNGVPECTTYSDNDKQIYKDLKTCEERAEVRFYETAGGFMQYNIPFESIVVGCKGGEES
(restricted) Ga0233448_118027413300024299SeawaterMYELFATFCILVNGVPECTTYSDNDKQIYKDLKTCEERAEVRFYETAGGFMQYNIPFE
Ga0208669_101586923300025099MarineMYELFATFCILVNGVPECTTYSDTEKQVYKDLKTCEERAEHRFYETAGGFMQYNIPFESIVIGCKGGEES
Ga0209535_1001791133300025120MarineLAHLATERALNTYMYELFATMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADIPFESIVIGCKGGEES
Ga0209535_1002150183300025120MarineMYKLFATFCLLVNGVPECTTYSDNDKQIYKDLKTCEERAEVRFYETAYGFMQYNIPFETIIIGCKGGKES
Ga0209535_100244153300025120MarineMYELFATFCILVNGVPECTTYSDTQKQIYKDLKTCEERAEYRFYETAGGFIQYNIPFESIVIGCKGGEDS
Ga0209535_101436353300025120MarineMCILVNGIPECTTYSDNKAEIFQTLIECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS
Ga0209535_102083423300025120MarineMFKLFATFCILVSGVPECTTYSDNEKKIYNELKECEERAEHRFYETVGGFLKYDIPFESIVIGCEGGEDS
Ga0209535_103556043300025120MarineMFKLFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETVGGFMMADVPFESIEIGCKGQEDS
Ga0209535_105285713300025120MarineMCILVNGIPECTTYSDNKAEIYKTLTECEQKAEVRFYETMGGFISANIPFESITIGCKGGEDS
Ga0209535_119257223300025120MarineMFKLFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDIPFEKITIGCKGGEDS
Ga0209535_120294313300025120MarineMFKLFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDIPFESITIGCKGEENS
Ga0209535_121106123300025120MarineMYELFATFCILVNGVPECTTYSDTQKMIYKDLKTCEERAEYRFYETAGGFIQYNIPFETIVIGCKGGEDS
Ga0209336_1003993923300025137MarineMYELFATFCILVNGVPECTTYSDTQKQIYKDLKTCEERAEYRFYETAGGFIQYNIPFESIVIGCKGGDES
Ga0209337_122121223300025168MarineMYELFATFCILVNGVPECTTYSDTEKQIYKDLKTCEERAEVRFYETAGGFMQYNIPFETIIIGCKGGENS
Ga0208814_109306613300025276Deep OceanIYMYELFATFCIMVNGVPECTTYSDTQKMIYKDLKTCEERAEYRFYETAGGFIQYNIPFETIVIGCKGGEDS
Ga0208134_108535933300025652AqueousMYELFATFCILVNGVPECTTYSDTEKQIYKDLKACEERAEYRFYETAGGFMQYNIPFESIVIGC
Ga0209657_101720473300025676MarineMYELFATFCILVNGVPECTTYSDNQKQVYKDLKTCEERAEYRFYETAGGFMQYNIPFESIVIGCEGGDES
Ga0209362_124320813300025770MarineFCVLVNGVPECTTYSDTEKQVYKDLKTCEERAEHRFYETAGGFMQYNIPFESIVVGCKGGEES
Ga0208545_110160523300025806AqueousMYELFATFCILVNGVPECTTYSDTEKQIYKDLKACEERAEYRFYETAGGFMQYNIPFESIVIGCKGGEDS
Ga0209309_1025408023300025881Pelagic MarineMYELFATFCVLVNGVPECTTYSDTEKQVYKDLQTCEERAEYRFYETADGFMQYDIPFESIVIGCKGGDDS
Ga0209335_1044972413300025894Pelagic MarineSTLQQNGPHFSLNICMYELFATFCILVNGVPECTTYSDTEKQVYKDLQTCEERAEYRFYETADGFMQYDIPFESIVIGCKGGDDS
Ga0208407_101277953300026257MarineMYELFATFCILVNGVPECTTYSDTQKQIYNDLKTCEERAEVRFYETVDGFMQYGIPIESIVIGCKGGEES
Ga0209384_106795613300027522MarineMVNGVPECTTYSDTQKMIYKDLKTCEERAEYRFYETAGGFIQYNIPFETIVIGCKGGEDS
Ga0209711_1008459033300027788MarineMYELFATFCIMVNGVPECTTYSDTQKMIYKDLKTCEERAEYRFYETAGGFIQYNIPFETIVIGCKGGEDS
Ga0209090_1002596723300027813MarineMFKLVATMCLLVNGVPECITYSDSKAELFKTIVECDQKAEVRFYETMAGFMKYDIPFQSITIGCKNDKDS
Ga0257122_117269623300028177MarineNGVPECTTYSDNDKQIYKDLKTCEERAEVRFYETAGGFMQYNIPFESIVVGCKGGEES
Ga0257110_132455823300028197MarineMCILVNGVSECTTYADTQDQIYKELRACEERAEVRFYETLSGFMMADIPFESIVIGCKGGEES
Ga0257115_103385943300028706MarineFPLNIYMYELFATFCILVNGVPECTTYSDNDKQIYKDLKTCEERAEVRFYETAGGFMQYNIPFESIVVGCKGGEES
Ga0183755_100442353300029448MarineMYELFATFCILVNGVPECTTYTDTEKQVYKDLKTCEERAEYRFYETAAGFIQYNIPFESIVIGCKGEKDS
Ga0183755_101128023300029448MarineMYELFATFCILVNGVPECTTYSDNQKQVYKDLKTCEEKAEYRFYETAGGFMQYNIPFESIVIGCKGGDES
Ga0308010_111445423300031510MarineMFKLFATMCILVNGIPECTTYSDNKDEIFKTLVECEQRAEVRFYETMGGFMAYDLPFESITIGCKGEENS


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