NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F102206

Metagenome Family F102206

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102206
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 61 residues
Representative Sequence VQFEEWFPPRRDERASEGFYTPLQEDFYNAYLNSGVAFRSQRVCSIVAIVAAAGE
Number of Associated Samples 51
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.78 %
% of genes near scaffold ends (potentially truncated) 14.85 %
% of genes from short scaffolds (< 2000 bps) 17.82 %
Associated GOLD sequencing projects 51
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (82.178 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(97.030 % of family members)
Environment Ontology (ENVO) Unclassified
(98.020 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(98.020 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.71%    β-sheet: 0.00%    Coil/Unstructured: 72.29%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.18 %
All OrganismsrootAll Organisms17.82 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300015269|Ga0182113_1032388All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar699Open in IMG/M
3300015275|Ga0182172_1028045All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae670Open in IMG/M
3300015275|Ga0182172_1035862All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae627Open in IMG/M
3300015276|Ga0182170_1027359All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae677Open in IMG/M
3300015277|Ga0182128_1023998All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae706Open in IMG/M
3300015292|Ga0182141_1014724All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar851Open in IMG/M
3300015298|Ga0182106_1073637All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae558Open in IMG/M
3300015314|Ga0182140_1043459All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae678Open in IMG/M
3300015322|Ga0182110_1103609All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar533Open in IMG/M
3300015322|Ga0182110_1111118All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae521Open in IMG/M
3300015344|Ga0182189_1037361All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae963Open in IMG/M
3300015345|Ga0182111_1178397All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae569Open in IMG/M
3300015361|Ga0182145_1139527All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae562Open in IMG/M
3300017410|Ga0182207_1086482All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae640Open in IMG/M
3300017427|Ga0182190_1084867All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae632Open in IMG/M
3300017427|Ga0182190_1110734All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae577Open in IMG/M
3300017442|Ga0182221_1045670All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae754Open in IMG/M
3300017689|Ga0182231_1100328All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Saccharum → Saccharum officinarum complex → Saccharum hybrid cultivar559Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere97.03%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.99%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300015267Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015268Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015269Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015275Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015276Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015277Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015279Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015283Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015285Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015287Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015291Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015292Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015295Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015299Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015305Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015307Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015314Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015321Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015322Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015344Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017404Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017409Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017427Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017430Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017433Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017436Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017680Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017689Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017690Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300021060Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MGHost-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0182122_101046613300015267Miscanthus PhyllosphereVQFDDWFPPRRDERASEHFYTVVQEDFYNAYINSGVAFRSQRVYSLESLVVAVGEQIHPHLS
Ga0182122_103673513300015267Miscanthus PhyllosphereMAKQVQQLRFVPFEDWFPPRRDERASEGFYTPLQEDFYNAYLNSGATFKSQRVCSIESIVAAAGEQI
Ga0182122_107313913300015267Miscanthus PhyllosphereVQQLRFVQFEDWFPPRRDERASEGFYTPLQEDFYNAYLNSGVAFRSQRVCSIVAIVAAAGE*
Ga0182154_103691413300015268Miscanthus PhyllospherePSRDDRASEGFYTPLQEDFYNAYLNSGVVFRSQRVCHIDSIVAAAGEHIRPYLTYLSGL*
Ga0182154_105066413300015268Miscanthus PhyllosphereAKQVQQLRFVQFEDWFPSRWDERASEHFYTVLQEDFYNAYLNSGVAFRSQRVCSIESLVAATGK*
Ga0182113_103238813300015269Miscanthus PhyllosphereVDFEQWFPPRRDEHGSEGFYTPLQEDFYNAYLNNGAIFISQRVCNIETIVVAAGERIHPYLSYLP
Ga0182188_105380313300015274Miscanthus PhyllosphereVEFDVWFPTRRDERAAEGFYTPLQEDFYNAYLNSGVVFRSQRVYSIEAIVT
Ga0182172_100472023300015275Miscanthus PhyllosphereVQQLHFVEFEQWFPLRQDERALEQFYTVLQEDFYNAYLNSGVAFRSQRVCSLEAIIVVVGE*
Ga0182172_102804513300015275Miscanthus PhyllosphereVNFDQWFLPRQDENALEGFYTPLQEDFYNAYLNSGALFRSQRVCNIESIVAAAGEHISPYLA
Ga0182172_103586223300015275Miscanthus PhyllosphereMAKQVQQLRFVDFEVWFPPRRDERVLEGFYTPLQEDFYNAYLNSGAVFRLQRVCNRVYCCSSWR
Ga0182170_102735923300015276Miscanthus PhyllosphereMAKDVQQLRFVQFEEWFPPRWDKRASEGFYTPLQEDFYHAYLNSRAIFISQRVCNIESIVAATREHICPY
Ga0182170_103726823300015276Miscanthus PhyllosphereVQQLYFVEFEEWFPPRWNECALEQFYTLLQEDFYNAYLNSGMAFRSHGVCSLEVIVAVAG
Ga0182128_102399813300015277Miscanthus PhyllosphereMVKQVQQLRFVLFEDWFPLRRDERASEGFYTPLQEDFYNVYLNSGVAFRSQRVCSIEAIVAAAGE*
Ga0182128_103909623300015277Miscanthus PhyllosphereVEFEQWFPSRRDEHALEGFYTPLQEDFYNAYLNSGAVFISQRVCNIESIVAAAGEHILPYLSYLPGLTDL
Ga0182128_106591913300015277Miscanthus PhyllosphereVWFPPRRDERASEGFYTPLQEDFYNAYLNNGAVFRSQRVCSIEAIVAAAGEHIRPYLAYL
Ga0182174_108014723300015279Miscanthus PhyllosphereMAKQVQQLRFVDFEVWFPPRRDERASEGFYTPLQEDFYNAYLNNGAVFRPQRVCNIESI
Ga0182156_104721223300015283Miscanthus PhyllosphereMAKQVQQLRFVDFEQWFPPRRDERASEGFYTPLQEDFYNAYLNSGALFRSQRVCNIESIVAAAGEHIR
Ga0182156_106183013300015283Miscanthus PhyllosphereMAATAKQVQQLRFVEFEVWFPLRRDECTSEGFYTPLQEDFYNAYLNSGAVFRSQRVCSIGSIVAAAGEHIWP
Ga0182186_101557813300015285Miscanthus PhyllosphereVQQLRFVDFEQWFPPRRDDRASEGFYTPLQKDFYNAYLNSGAVFRSKRVCHIDSIVVAAREHIR*
Ga0182186_101990613300015285Miscanthus PhyllosphereQWFPPRRDERASEGFYTPLQEDFYNAYLNSGALFRSQRVCNIESIVAAAGE*
Ga0182171_108068513300015287Miscanthus PhyllosphereMAKQVQQLRFVEFEQWFPPRRDDRASEGFYTPLQEDFYNVYLNSGALFRSQRVCNIESIVAAAGEH
Ga0182125_106728623300015291Miscanthus PhyllosphereVDFEVWFLPRRDERASEGFYTPLQEDFYNAYLNSGAVFRPQRVCSIESIVAAIGEHIRPHLA
Ga0182125_107359613300015291Miscanthus PhyllosphereLHFVEFEEWFPPRRDEHALEQFYTVLQEDFYNAYLNSGVAFRSQRVCSFEAIVAVAGE*
Ga0182141_101472413300015292Miscanthus PhyllosphereVQQLRFVDFEQWFPPRRDDRASEDFYTPLQEDFYNAYLNSGAVFRPRRVCNIES
Ga0182141_107547713300015292Miscanthus PhyllosphereVTFEEWFPPRRDERASEHFYTVLQEDFYNAYLNSGVALRSQRVCSIESLVAAIGEQIHPHLFY
Ga0182175_102638013300015295Miscanthus PhyllosphereVQFEEWFPPRRDERASEGFYTPLQEDFYNAYLNSGVAFRSQRVCSIVAIVAAAGE*
Ga0182106_107363723300015298Miscanthus PhyllosphereLDLRATTDKQVQQLRFVDFERWFLPRRDDRASEGFYTSLQEDFYNAYLNSGVVFKSQRVCHIDSIVAATREHIR*
Ga0182107_103146513300015299Miscanthus PhyllosphereVQQLHFVEFEQWFPPRRDERASEQFYIVLHEDFYNAYLNSGMAFISQRVCSLEAIVAIAGE*
Ga0182112_103527623300015304Miscanthus PhyllosphereVEFDVWFPPRRDERATEGFYTPLQEDFYNAYLNSGAIFRSQWVCSIEAIVAAAGEHIRPYLAY
Ga0182112_105018713300015304Miscanthus PhyllosphereVQQLRFVQFEEWFPPRRDERTSEGFYTPLQEDFYNAYLNSGVAFRSQRVCSIEAIVVVARE*
Ga0182112_110498423300015304Miscanthus PhyllosphereMDFEAWFPPRRDDRASKGFYTPLQKDFYNAYLNSRVVFRSQRVCHIDSIVAA
Ga0182158_105591913300015305Miscanthus PhyllosphereLHLVEFEQWFPSRQDERASEQFYTMLQEDFYNAYLNSGVAFRSQRVCSLEAIVAVAGE*
Ga0182158_106967823300015305Miscanthus PhyllosphereVDFEQWFPSRRDNRALEGFYTPLQEDFYKAYLNSGALFRSQRVCNIESIVAAAGEHIRPYLAYL
Ga0182144_104806813300015307Miscanthus PhyllosphereFVYLEQWFPPRRDDRALEGIYTPLLEDFYNAYLNSGAVLRSQRVCNIESIIAAAG*
Ga0182144_109154213300015307Miscanthus PhyllosphereVDFEQWFPPRRDDRASEGFYTPLQEDFYNAYLNSGAVFRSQRVCSFESIVAVAGEHIHPYLSYLP
Ga0182144_109182513300015307Miscanthus PhyllosphereVEFEQWFPLRQDERASEQFYTVLQEDFYNAYLNSGVAFRSQRVCSLEAIVAVAGE*
Ga0182140_104345913300015314Miscanthus PhyllosphereMAKQVRQLRFVEFEDWFPPRRDERASEWFYTPLQEDFYNAYLNSGAVFR
Ga0182140_104804213300015314Miscanthus PhyllosphereVQFEDWFPPRRDERASEGFYTPLQEDFYNAYLNNGVAFRSQRVCSIEAIVVAAGE*
Ga0182140_107037213300015314Miscanthus PhyllosphereMRFVDFEVWFPLRRDERAAEGFYMPLQEDFYNAYLNSGAMFRSQRVCSIEPIVAAAGEHIRPYLS
Ga0182127_106331813300015321Miscanthus PhyllosphereVQFEDWFPSRRDECASEGFYTPLQEDFYNAYLNSGATFRSQRVCSIEAIIAAAGEQIYPH
Ga0182110_110360913300015322Miscanthus PhyllosphereVTHLDLRAATAKQVQQLRFMLFEDWFPPRRDERASEGFYTPLQEDFYNAYLNSGVAFRSQRVCSIESVVAA
Ga0182110_111111823300015322Miscanthus PhyllosphereMAKQVQQLRFVEFEQWFPPRRDDRASDGFYTPLQKDFYNAYLNSGAVFISQRVCNIESIVAAAGE
Ga0182129_105244323300015323Miscanthus PhyllosphereVQQLRFMQFEDWFPPRRDERALERFYTPLQEDFYNAYLNSGIAFRSQRVCSIEAIVAAAGE*
Ga0182129_109013023300015323Miscanthus PhyllosphereMAKQVQQLRFVDFEVWFPPRRDDRASEGFYTPLQEDFYNAYLNSGALFRSQRVCNIESIVAAAR
Ga0182187_114433713300015341Miscanthus PhyllosphereMQFEDWFPPRQDERALEHFYTVLQEDFYHAYLNSGVAFISQRVCSIESLVAATGE*
Ga0182187_116028823300015341Miscanthus PhyllosphereVQFEDWFPPRRDERALEGFYTPLYEEFYNAYLNSGVAFRSQRVYSIEALVSVVGEQIHPHLSYLSGLSDLLGWTG*
Ga0182189_103736113300015344Miscanthus PhyllosphereMAKQVQQLRFVDFEVWFPPRRDARASEGFYTPLQEDFYNAYLTSGTIFRSQRVCNIESIVEAV
Ga0182189_108758013300015344Miscanthus PhyllosphereVQQLRFVQFEEWFLPRRDERASEGFYTPLQEDFYNAYLNSGVAFRSQRVCSIVAIVAAAGE*
Ga0182189_117692013300015344Miscanthus PhyllosphereRFMQFEDWFPSRWDERASEHFYTPLQEDFYNAYLNNGVAFRSQRVCSIEAIVVATGE*
Ga0182189_117988213300015344Miscanthus PhyllosphereMDFEVWFPPKRDERASEGFYTPLQEDFYNAYLNSGAVFRLQRVCNIESIVVAAGEHIRLYLS*
Ga0182189_119937613300015344Miscanthus PhyllosphereMAKQVQQLRFVDFEVWFPPRRDERASEGFYTPLQEDFYNAYLTSGTIFRSQRVCNIESIVEAV
Ga0182111_114420513300015345Miscanthus PhyllosphereVEFEVWFPPKRDERAAEGFCIPHQEDFYNAYLNSGAVFRSQRVCSIEAIVAAAGEHIHPYLAY
Ga0182111_117839713300015345Miscanthus PhyllosphereMAKQVQQLRFVQFEEWFPPRRDEHASEGFYTPLQEDFYNTYLNSGAVFISQRVCNIETIVAAAREHIH
Ga0182139_116174413300015346Miscanthus PhyllosphereVWFPPRRDERAAEGFYTPLQEDFYNAYLNIGAVFRSQRVCSIESIVAAAGE
Ga0182139_119478213300015346Miscanthus PhyllosphereLRAATARQVQQLRFVEFEVWFPPRRDERAVEGFYTPLQEDFYNAYLNSGAMFRSQRVCRIESIVAA
Ga0182139_123035623300015346Miscanthus PhyllosphereVDFEHWFPPRRDDRASEGFYTPLQEDFYNAYLNGGAVFSSQRVCKIKSTVAAAGEH
Ga0182161_121079313300015351Miscanthus PhyllosphereLRFVEFDVWFPPRRDERAVEGFYTPLQEDFYNAYLNSGAVFRSQRVCSIEPIVAAAGE
Ga0182161_123934523300015351Miscanthus PhyllosphereMAKQVQQLRFVQFEEWFLPRRDERASEGFYTPVQKDFYNAYLNSVEVFRSQRVCNIETIVVAAREHIR
Ga0182161_124308313300015351Miscanthus PhyllosphereLRFVDFEVWFPPRRDERALEGFYTPLQEDFYNAYLNSGAVFRPQRVCNIE
Ga0182159_124558813300015355Miscanthus PhyllosphereVQFEDWFPPRRDECASEYFYTVLQEHFYNAYLNSDVAFRSQRVCSLESLIAVAGE*
Ga0182145_113952713300015361Miscanthus PhyllosphereMAKQVQQLRFMDFEQWFPPRRDDRASEGFYTPLQEDFYNAYLNSGALFRSQRLCNIESIVAAARKHIRPYLTYLPGLTYL
Ga0182145_116301913300015361Miscanthus PhyllosphereMAKQVQQLIFVQFEEWFPPRRDERASEGFYTSLQEDFYNAYLNSGAAFMSQRVYSIEAIVAAA
Ga0182203_113823013300017404Miscanthus PhyllosphereLPRRDERASEYFYIVLQEDFYNAYLNSDVAFISQRVWSLESLVAA
Ga0182204_110903723300017409Miscanthus PhyllosphereMWFPPRRDERASEGFYTPLQEDFYNAYLNSGAVFRSQRVCRLESIVAAA
Ga0182207_107873313300017410Miscanthus PhyllosphereWFSPRRDERASEGFYTPLQEDFYNAYLNSGVAFRSHRVCSIEAIVAVAG
Ga0182207_108648213300017410Miscanthus PhyllosphereLRFVEFEDWFPSRRDERASEWFYTPLQEDFYNAYLNSGVVFRSQRVCSIEA
Ga0182207_110438713300017410Miscanthus PhyllosphereVEFEEWFPPRWDVHASEQFYTVLQENFYNAYLNSGVTFRSQRVCYLEAIVKVGGE
Ga0182207_113626613300017410Miscanthus PhyllosphereVDFEQWFPPRRDDRASEGFYTPLQEDFYNAYLNNGALFRSQRVCNIESIVAAAEEHI
Ga0182208_106355723300017411Miscanthus PhyllosphereLRFVDFEVWFPPRRDERALEGFYTPLQEDFYNAYLNSGAVFRPQRVCTIESIIAAGEHIRPYLAYLL
Ga0182222_105281823300017413Miscanthus PhyllosphereVQFEEWFPLRRDKRALEGFYTPLQKDFYNAYLNSGAAFRSQRVCNIESIVAAAGEHICPYLSYLLG
Ga0182202_107363913300017415Miscanthus PhyllosphereLRFVQFEDWFSPRRDECASKGFYTPLQEDFYNAYLNSGVAFRSHRVCSIEAIIAAT
Ga0182202_109157313300017415Miscanthus PhyllosphereVQQLCFVEFEEWFPLRRDERASEQFYTVLQEDFYNAYLNHGVAFRSQRVFSLEAIVVVAG
Ga0182224_113006013300017425Miscanthus PhyllosphereMQFEDWFPPRQDEHASEGFYTPLQEDFYNAYLNNGVAFRSQRVCFIESLVAAAGEQIHPHLSYLLG
Ga0182224_114575923300017425Miscanthus PhyllosphereMAKQVQQLRFVDFDQWFRLRRDERASEGFYTPLQEDFYNAYLNSGALFRSQRVCNIESIVAAAG
Ga0182190_108486713300017427Miscanthus PhyllosphereMAKQVQQLRFVPFEDWFPPRRDERASEGFYTPLQEDFYNAYLNSGLAFRSQRVCSIESII
Ga0182190_111073423300017427Miscanthus PhyllosphereVDFEQWFPPRRDERASEGFYTPLQEDFYNAYLNNGAVFIFQRVCNIETIVVAAREHIRPY
Ga0182192_108876513300017430Miscanthus PhyllosphereMDFEVWFPPRRDERASEGFYTPLQEDFYNAYLNSGAVFRSQRVYNIEAI
Ga0182192_115286413300017430Miscanthus PhyllosphereMAKQVQQLRFVQFEEWFPPRRDECASKGFYTPLHEDFYNAYLNSGVAFRSQRVCSIESIVAAAG
Ga0182192_115438013300017430Miscanthus PhyllosphereQLRFVQFVDWFPPRRDERASEGFYTPLKEDFYNAYLNSGVAFRSHRVCSIEAIVTAAREQIYLDG
Ga0182206_102353323300017433Miscanthus PhyllosphereVQFEDWFPPRRDERASEGFYTLLQEDFYNAYLNSGVAFRSQRVCSIEAIVVAAGE
Ga0182206_112435823300017433Miscanthus PhyllosphereVEFHVWFPPVRDPRASLAFYTPLQEDFYDAYVNSQAMIRPQRVCELEAVVRAAGETIRPYLTYLPR
Ga0182206_113499113300017433Miscanthus PhyllosphereVQFEDWFPPRRDEHALEGFYTPLQEDFYNAYLNSGVAFRSQRVCSIEAIIAAAREQIYPH
Ga0182209_114466413300017436Miscanthus PhyllosphereLDLRAATAKQVQQLRFVPFKDWFPQRRDEHASEGFYTPLQEDFYNAYLNSGVAFRSQRVCSIEAIVAA
Ga0182209_116771213300017436Miscanthus PhyllosphereVQFEDWFLLRRDERASEHFYTVLQEDFYNAYLNSGVAFRSHKVCSIEAIVAATGEQMEEA
Ga0182191_110811233300017438Miscanthus PhyllosphereMAKQVQQLCFVEFDVWFPPRRDERAAEGFYTPLQEDFYNAYLNSGAAFRSQRVCSIESIVAAAG
Ga0182191_116742613300017438Miscanthus PhyllosphereVWFPPRRDERAAEGFYTPLQEDFYNGYLNSGAVFRSQWVCSIESIVAAVGEH
Ga0182221_104567013300017442Miscanthus PhyllosphereMAKQVRQLRFVEFEDWFPPRRDERASEGFYTPLLEDFYNAYLNSGAVFRSQRVCSIEAIV
Ga0182221_113277723300017442Miscanthus PhyllosphereVDFEQWFPPRRDDRASEGFYTSLQEDFYNAYLNSGAVFRSQRVYIIESIVAAAGEHIR
Ga0182221_113501713300017442Miscanthus PhyllosphereVEYEEWFPPRRDERASEQFYTVLQEDFYDAYLNSGVAFRSQRVCLLEALVVV
Ga0182221_115813213300017442Miscanthus PhyllosphereVQFEDWFPSRRDERASEHFYTPLQEDFYNAYLNSGVAFRSQRVCSIEALVVAVGEQIHPHLSYLPGLTDLL
Ga0182233_105319323300017680Miscanthus PhyllosphereVDFEVWFPSRRDDRALEGFYTTLQEDFYNAYLNSGAVFRSQRVCHIDSIVAVAG
Ga0182218_109336213300017683Miscanthus PhyllosphereMAKQVQQLRFVQFEEWFPPRRDEHASEGFYTPLQEDFYNAYLNSGVAFWSQRVCSIESIVAAAGE
Ga0182218_111105113300017683Miscanthus PhyllosphereVDFDQWFSLRWDDRASEGFYTPLQEDFYNTYLNSGALFRSQRVCNIESIVAATGEHIRSYLAY
Ga0182218_112434213300017683Miscanthus PhyllosphereMDFEVWFPPRRDERASERFYTPLQEDFYNAYLNSGAVFRPQRVCNIEFIVAAAR
Ga0182225_104398323300017684Miscanthus PhyllosphereVDFEQWFPLRRDDRASEGFYTPLQEDFYNAYLNSGVVLRSQRVCKIDAIIA
Ga0182225_109791413300017684Miscanthus PhyllosphereLRFVDFEVWFPPRKDERASERFYTPLQEDFYNAYLNSGVVFRPQRVCNIVSIVAVAGEHIHP
Ga0182231_110032813300017689Miscanthus PhyllosphereMQFEDWFPPRRDERALERFYTPLQEDFYNAYLNSGVAFRSQRVCSIEAIVVAVGEQIYPHLSYLPGLTDLLG
Ga0182223_109004613300017690Miscanthus PhyllosphereMQFEDWFPPRWDEHASEHFYTPLQEDFYNAYLNSGVAFKSQRVCSIESLVAAAGEQIRPHLSYL
Ga0182232_105759623300021060PhyllosphereLRFVEFDVWFPPSRDERAAEGFYTPLQEDFYNAYLNSGAVFRSQRVCSIEPIVAA
Ga0207669_1109432223300025937Miscanthus RhizosphereLRFVEFDVWFPPRRDERAAKGFYTPLQEDFYNAYLNSGAVFRSQRVCSIEAIVAAVGEHIRPYLSYLLG
Ga0207677_1165225023300026023Miscanthus RhizosphereMTKKVQQLRFVQFEEWFPPKRDERASEGFYTPLQKDFYNAYLNSGVAFRSQRVCSIEAIVVAAGE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.