Metagenome Family F102221

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102221
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	47 residues
Representative Sequence	MARVLKVVSLLFKAVNYSQQFLIVGIIPNFRSLEFSTIEYYWSLVELGSV
Number of Associated Samples	17
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.33 %
% of genes near scaffold ends (potentially truncated)	23.76 %
% of genes from short scaffolds (< 2000 bps)	42.57 %
Associated GOLD sequencing projects	17
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.485 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza (75.248 % of family members)
Environment Ontology (ENVO)	Unclassified (77.228 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (66.337 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.69% β-sheet: 0.00% Coil/Unstructured: 42.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF06985	HET	1.98
PF07727	RVT_2	1.98
PF07690	MFS_1	0.99
PF01494	FAD_binding_3	0.99
PF13637	Ank_4	0.99
PF13506	Glyco_transf_21	0.99
PF00385	Chromo	0.99
PF00400	WD40	0.99
PF13358	DDE_3	0.99
PF13415	Kelch_3	0.99
PF12550	GCR1_C	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.98
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.99
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.99
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
All Organisms	root	All Organisms	48.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
cellular organisms	root	All Organisms → cellular organisms	46.53 %
Viruses	superkingdom	All Organisms → Viruses	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	45.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	22.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	20.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	19.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	19.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	19.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	9.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
dothideomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta	6.93 %
sordariomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta	1.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Eurotiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Dothideomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes	6.93 %
Leotiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes	1.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Eurotiomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Helotiales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales	1.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Eurotiales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales	0.99 %
Pleosporomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Aspergillaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Aspergillaceae	0.99 %
Pleuroascaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Pleuroascaceae	0.99 %
Pleosporales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Venustampulla	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Pleuroascaceae → Venustampulla	0.99 %
Aspergillus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Aspergillaceae → Aspergillus	0.99 %
Pleosporineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.98 %
Venustampulla echinocandica	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Pleuroascaceae → Venustampulla → Venustampulla echinocandica	0.99 %
Aspergillus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Aspergillaceae → Aspergillus	0.99 %
Pleosporineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100134781	All Organisms → Viruses → Predicted Viral	2332	Open in IMG/M
3300002245\|JGIcombinedJ26739_101101246	Not Available	681	Open in IMG/M
3300012205\|Ga0137362_11145044	Not Available	661	Open in IMG/M
3300012206\|Ga0137380_11414978	All Organisms → cellular organisms → Eukaryota → Opisthokonta	580	Open in IMG/M
3300012206\|Ga0137380_11436322	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae	575	Open in IMG/M
3300012208\|Ga0137376_11138898	Not Available	667	Open in IMG/M
3300012209\|Ga0137379_10732812	Not Available	894	Open in IMG/M
3300012209\|Ga0137379_11479204	All Organisms → cellular organisms → Eukaryota → Opisthokonta	581	Open in IMG/M
3300012210\|Ga0137378_11444631	Not Available	600	Open in IMG/M
3300012210\|Ga0137378_11570992	Not Available	567	Open in IMG/M
3300012351\|Ga0137386_10929286	Not Available	622	Open in IMG/M
3300012351\|Ga0137386_11130680	Not Available	551	Open in IMG/M
3300012357\|Ga0137384_10507474	Not Available	990	Open in IMG/M
3300012359\|Ga0137385_10508330	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes	1019	Open in IMG/M
3300012359\|Ga0137385_10688826	Not Available	854	Open in IMG/M
3300012359\|Ga0137385_11551169	All Organisms → cellular organisms → Eukaryota → Opisthokonta	526	Open in IMG/M
3300012683\|Ga0137398_11045516	Not Available	564	Open in IMG/M
3300012944\|Ga0137410_11468693	Not Available	594	Open in IMG/M
3300015051\|Ga0137414_1228463	All Organisms → Viruses → Predicted Viral	4134	Open in IMG/M
3300019890\|Ga0193728_1119867	Not Available	1193	Open in IMG/M
3300019890\|Ga0193728_1216588	Not Available	792	Open in IMG/M
3300019890\|Ga0193728_1240350	Not Available	732	Open in IMG/M
3300027908\|Ga0209006_10333657	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1288	Open in IMG/M
3300027908\|Ga0209006_10859292	Not Available	731	Open in IMG/M
3300027908\|Ga0209006_11094051	Not Available	629	Open in IMG/M
3300028794\|Ga0307515_10007777	Not Available	21089	Open in IMG/M
3300028794\|Ga0307515_10010656	All Organisms → cellular organisms → Eukaryota → Opisthokonta	17575	Open in IMG/M
3300028794\|Ga0307515_10014149	Not Available	14831	Open in IMG/M
3300028794\|Ga0307515_10017778	Not Available	12930	Open in IMG/M
3300028794\|Ga0307515_10023521	Not Available	10791	Open in IMG/M
3300028794\|Ga0307515_10027116	All Organisms → cellular organisms → Eukaryota → Opisthokonta	9812	Open in IMG/M
3300028794\|Ga0307515_10062718	Not Available	5241	Open in IMG/M
3300028794\|Ga0307515_10064471	Not Available	5121	Open in IMG/M
3300028794\|Ga0307515_10096996	Not Available	3608	Open in IMG/M
3300031838\|Ga0307518_10017801	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes	5093	Open in IMG/M
3300031838\|Ga0307518_10024433	Not Available	4356	Open in IMG/M
3300031838\|Ga0307518_10025128	Not Available	4294	Open in IMG/M
3300031838\|Ga0307518_10028729	Not Available	4017	Open in IMG/M
3300031838\|Ga0307518_10031622	Not Available	3835	Open in IMG/M
3300031838\|Ga0307518_10044027	Not Available	3249	Open in IMG/M
3300031838\|Ga0307518_10052221	Not Available	2970	Open in IMG/M
3300031838\|Ga0307518_10062682	Not Available	2700	Open in IMG/M
3300031838\|Ga0307518_10085201	Not Available	2278	Open in IMG/M
3300031838\|Ga0307518_10090861	All Organisms → cellular organisms → Eukaryota	2197	Open in IMG/M
3300031838\|Ga0307518_10105678	Not Available	2011	Open in IMG/M
3300031838\|Ga0307518_10107199	Not Available	1994	Open in IMG/M
3300031838\|Ga0307518_10108279	Not Available	1982	Open in IMG/M
3300031838\|Ga0307518_10113822	Not Available	1924	Open in IMG/M
3300031838\|Ga0307518_10126408	Not Available	1803	Open in IMG/M
3300031838\|Ga0307518_10131482	Not Available	1759	Open in IMG/M
3300031838\|Ga0307518_10167802	Not Available	1500	Open in IMG/M
3300031838\|Ga0307518_10171398	Not Available	1479	Open in IMG/M
3300031838\|Ga0307518_10193245	Not Available	1361	Open in IMG/M
3300031838\|Ga0307518_10217401	Not Available	1251	Open in IMG/M
3300031838\|Ga0307518_10218806	Not Available	1245	Open in IMG/M
3300031838\|Ga0307518_10256419	Not Available	1106	Open in IMG/M
3300031838\|Ga0307518_10280696	Not Available	1031	Open in IMG/M
3300031838\|Ga0307518_10291953	All Organisms → cellular organisms → Eukaryota → Opisthokonta	999	Open in IMG/M
3300031838\|Ga0307518_10544518	Not Available	578	Open in IMG/M
3300031838\|Ga0307518_10586349	Not Available	538	Open in IMG/M
3300031838\|Ga0307518_10603516	Not Available	523	Open in IMG/M
3300033179\|Ga0307507_10000029	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	196880	Open in IMG/M
3300033179\|Ga0307507_10000119	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes	132137	Open in IMG/M
3300033179\|Ga0307507_10000155	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	121698	Open in IMG/M
3300033179\|Ga0307507_10000452	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	85634	Open in IMG/M
3300033179\|Ga0307507_10000468	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes	84747	Open in IMG/M
3300033179\|Ga0307507_10000635	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Pleuroascaceae → Venustampulla → Venustampulla echinocandica	76009	Open in IMG/M
3300033179\|Ga0307507_10000774	All Organisms → cellular organisms → Eukaryota → Opisthokonta	70312	Open in IMG/M
3300033179\|Ga0307507_10000874	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	66913	Open in IMG/M
3300033179\|Ga0307507_10000991	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	63101	Open in IMG/M
3300033179\|Ga0307507_10001174	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	58218	Open in IMG/M
3300033179\|Ga0307507_10001181	All Organisms → cellular organisms → Eukaryota → Opisthokonta	58111	Open in IMG/M
3300033179\|Ga0307507_10001204	All Organisms → cellular organisms → Eukaryota → Opisthokonta	57662	Open in IMG/M
3300033179\|Ga0307507_10001402	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	54127	Open in IMG/M
3300033179\|Ga0307507_10001620	All Organisms → cellular organisms → Eukaryota → Opisthokonta	49813	Open in IMG/M
3300033179\|Ga0307507_10001799	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	47035	Open in IMG/M
3300033179\|Ga0307507_10001846	All Organisms → cellular organisms → Eukaryota → Opisthokonta	46296	Open in IMG/M
3300033179\|Ga0307507_10001947	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	44826	Open in IMG/M
3300033179\|Ga0307507_10001974	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Aspergillaceae → Aspergillus	44490	Open in IMG/M
3300033179\|Ga0307507_10002032	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	43871	Open in IMG/M
3300033179\|Ga0307507_10002063	All Organisms → cellular organisms → Eukaryota → Opisthokonta	43550	Open in IMG/M
3300033179\|Ga0307507_10002157	All Organisms → cellular organisms → Eukaryota → Opisthokonta	42269	Open in IMG/M
3300033179\|Ga0307507_10002226	All Organisms → cellular organisms → Eukaryota → Opisthokonta	41439	Open in IMG/M
3300033179\|Ga0307507_10002255	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes	41101	Open in IMG/M
3300033179\|Ga0307507_10002378	Not Available	39767	Open in IMG/M
3300033179\|Ga0307507_10002549	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales	37888	Open in IMG/M
3300033179\|Ga0307507_10002773	All Organisms → cellular organisms → Eukaryota → Opisthokonta	35734	Open in IMG/M
3300033179\|Ga0307507_10002872	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	34767	Open in IMG/M
3300033179\|Ga0307507_10003155	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes	32754	Open in IMG/M
3300033179\|Ga0307507_10004345	All Organisms → cellular organisms → Eukaryota → Opisthokonta	25326	Open in IMG/M
3300033179\|Ga0307507_10004542	All Organisms → cellular organisms → Eukaryota → Opisthokonta	24377	Open in IMG/M
3300033179\|Ga0307507_10004857	All Organisms → cellular organisms → Eukaryota → Opisthokonta	23053	Open in IMG/M
3300033179\|Ga0307507_10005166	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	21834	Open in IMG/M
3300033179\|Ga0307507_10005943	All Organisms → cellular organisms → Eukaryota → Opisthokonta	19386	Open in IMG/M
3300033179\|Ga0307507_10006093	All Organisms → cellular organisms → Eukaryota → Opisthokonta	18928	Open in IMG/M
3300033179\|Ga0307507_10007072	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	16615	Open in IMG/M
3300033179\|Ga0307507_10007861	All Organisms → cellular organisms → Eukaryota → Opisthokonta	15129	Open in IMG/M
3300033179\|Ga0307507_10381289	Not Available	812	Open in IMG/M
3300033179\|Ga0307507_10437767	Not Available	727	Open in IMG/M
3300033179\|Ga0307507_10441054	All Organisms → cellular organisms → Eukaryota → Opisthokonta	723	Open in IMG/M
3300033179\|Ga0307507_10578388	Not Available	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	75.25%
Environmental	Environmental	24.75%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	75.25%
Terrestrial	Environmental → Terrestrial	24.75%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	75.25%
Soil	Environmental → Terrestrial → Soil	24.75%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	75.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.80%
Loam	Environmental → Terrestrial → Soil → Loam	4.95%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	75.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.95%

Habitat	Taxonomy	Distribution
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	75.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300031838	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM	Host-Associated	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001347811	3300002245	Forest Soil	CVLKVMSPLFKAVNYSQQFLIXGIIPNFKPLEFSXIEYY*
JGIcombinedJ26739_1011012461	3300002245	Forest Soil	MACVLKVISPLFKAVNYSQQFLIMGIIPNFRLLEFSTIEYY*
Ga0137362_111450441	3300012205	Vadose Zone Soil	FKVMLLLFKVVDYSQQFLVVGIIPNFRPLQFSAVEYY*
Ga0137380_114149781	3300012206	Vadose Zone Soil	MSGIARVLKVMSPLFKAVDYGQQFLVVGIIPNFRPLEFFTIEYY*
Ga0137380_114363221	3300012206	Vadose Zone Soil	MAHVLKVMSPLIEIVDYGQQFLVMGVIPDFKSLKFSTIKCYWSPIELGNV*
Ga0137376_111388982	3300012208	Vadose Zone Soil	ISSISYILKVISPLFKAVDYSQQFLIIGIIPNFRPLEFSTIKYY*
Ga0137379_107328121	3300012209	Vadose Zone Soil	MAHVLKIMSLLFKAVDYGQQFLIMGIIPNFKPLEFPAIECY*
Ga0137379_114792041	3300012209	Vadose Zone Soil	MAYVLKVMLLLFEVVDYGQQFLIMGMIPNFRPLEFSTIEYYWSLIELGSI*
Ga0137378_114446311	3300012210	Vadose Zone Soil	MSGIAYILKIILLLFKAVDYGQQFFIMGIIPDFRPLEF
Ga0137378_115709921	3300012210	Vadose Zone Soil	FKVVDYGQQFLIMGIIFDFRPLKFSAIECYWSLVELGSVQIPVRLQEDPGKGKI*
Ga0137386_109292861	3300012351	Vadose Zone Soil	MARVLKVMSPLVKAVDYGQQFLVVGIIPNFRPLEFSAIKCYWSPIELSNIWIPIRL*
Ga0137386_111306802	3300012351	Vadose Zone Soil	MARVLKVMSPLFKAVNYGQQFFIMGIIPDFRPLEFSIVK
Ga0137384_105074741	3300012357	Vadose Zone Soil	MARVLKIMSPRFKAVDYSQQFLIMGIIPKFRPLEFSAIKCY
Ga0137385_105083301	3300012359	Vadose Zone Soil	MVYILKVMSPLFKAVDYGQQFLVIGIILNFRPLEFFIIKYYWSLMELGNI*
Ga0137385_106888261	3300012359	Vadose Zone Soil	MACVLKVMSPLFKAVDYGQQFLVVGIIPNFRPLEFSTIEYYWSPMELSSI*
Ga0137385_115511691	3300012359	Vadose Zone Soil	MSGIAHMLKVISPLFKVVDYGQQFLVVGMIPNFRPLEFSTVECY*
Ga0137398_110455161	3300012683	Vadose Zone Soil	ARVLKVVSLLFKVVNYSQQFLIIGIIPNFRPLEFSTIEYY*
Ga0137410_114686931	3300012944	Vadose Zone Soil	MARVLKVVSLLFKAVNYSQQFLIVGIIPNFRSLEFSTIEYYWSLVELGSV*
Ga0137414_12284632	3300015051	Vadose Zone Soil	MAYVLKVISLLFKVVNYSQQFLIVGIIPNFRPLEFSTIKYY*
Ga0193728_11198671	3300019890	Soil	MSGIARVLKVVLLLFKAVDYSQQFLVMGIIPNFRPLKFSTIEYYWSLVELGSV
Ga0193728_12165881	3300019890	Soil	MAYVLKVISPLFKAVDYSQQFLIIGIIPNFRPLEFSTIEYY
Ga0193728_12403501	3300019890	Soil	VISPLFKAVDYSQQFLIIGIIPNFRPLEFSTIEYY
Ga0209006_103336572	3300027908	Forest Soil	YVLKVMLPLFKAVNYSQQFLIIGIIPNFRPLKFSAIKYY
Ga0209006_108592921	3300027908	Forest Soil	CVFKVMSPLFKVVNYSQQFLIMGIIPNFRPLEFSAIECYWSLVKLGSI
Ga0209006_110940511	3300027908	Forest Soil	EYISGIAYILKVILLLFKAVNYSQQFLIMGIIPNFRPLEFSIIKYY
Ga0307515_100077773	3300028794	Ectomycorrhiza	MLKVVSPLFKVVNYSQQFLIVGIILNFRPLEFSAIKYYLSLIELGSV
Ga0307515_100106566	3300028794	Ectomycorrhiza	MSGIARVLKVVSPLFKAVDYSQQFLIIGIIPNFRSLEFSAIKYY
Ga0307515_100141491	3300028794	Ectomycorrhiza	MTRVLKIVSLLFKAVNYSQQFLIVGIIPNFRSLEFSTIKYY
Ga0307515_100177782	3300028794	Ectomycorrhiza	MAYMLKVVSLLFKVVNYSQWFFIIGIIPNFRPLEFSAIEYY
Ga0307515_100235212	3300028794	Ectomycorrhiza	MACVLKVVLPLFKAVNYSQQFLIVGIIPNFRSLKFSTIKYYWFLVELGSV
Ga0307515_100271161	3300028794	Ectomycorrhiza	MARVLKVVSPLFKVVNYSQQFLIIGIIPDFRPLEFSAIKYY
Ga0307515_100627181	3300028794	Ectomycorrhiza	MARVLKVVSPLFKAVDYSQQFFIMGIIPNFRSLEFSTIKYY
Ga0307515_100644711	3300028794	Ectomycorrhiza	MAHILKVISPLFKAVNYSQQFLVVGIIPNFRSLEFSTIKYY
Ga0307515_100969961	3300028794	Ectomycorrhiza	MSGIACVLKVVSPLFKVVNYSQQFLIEGIIPNFRSLKFSIIKYY
Ga0307518_100178011	3300031838	Ectomycorrhiza	MSGIACVLKVVSPLFKAVDYSQQFLVVGMIPNFKSLEFSAVECY
Ga0307518_100244332	3300031838	Ectomycorrhiza	MSGIARVLKVVSPLFKVVNYSQQFLIVGIILNFRSLEFSAIKCY
Ga0307518_100251282	3300031838	Ectomycorrhiza	MAHVLKVVSPPFKVVNYSQQFLIIGIIPNFKPLEFSIIKCHQSLIKLSSV
Ga0307518_100287291	3300031838	Ectomycorrhiza	MSGITRVLKVMSLLFKAVDYSKQFLIVGMIPNFRPLEFSAIKCYWSLVELGSI
Ga0307518_100316221	3300031838	Ectomycorrhiza	MAYVLKIVSLLFKIVDYSQQFLIIGIIPNFKPLEFSIIKYYQFLIELGSV
Ga0307518_100440271	3300031838	Ectomycorrhiza	MAHMLKVVSLLFKAVNYSQQFLIMGIIPNFKSLEFSTIKY
Ga0307518_100522211	3300031838	Ectomycorrhiza	MACVLKIILLLFEVVDYNKQFLIVGIILNFKSLEFSAVECY
Ga0307518_100626821	3300031838	Ectomycorrhiza	MARVLKVVSLLFKIVNYSQQFFIVDIIPNFKPLKFSVIECY
Ga0307518_100852011	3300031838	Ectomycorrhiza	YISGMACVLKVVLLLFKVINYSQQFFIVGIIPNFKSLEFFAIKCHQSLVELSSI
Ga0307518_100908611	3300031838	Ectomycorrhiza	MSGIVCVLKIMLPLFKTVNYSKKFFIMGIIPNFKPLEFSTIKCY
Ga0307518_101056781	3300031838	Ectomycorrhiza	MSGITHILKVMPPLFKTVNYSKQFLIVGIISNFKPLEFFVIKYY
Ga0307518_101071991	3300031838	Ectomycorrhiza	MTYILKVMLLLFKVINYNKQFLIIGIIPNFMPLEFSAIKYY
Ga0307518_101082791	3300031838	Ectomycorrhiza	MSGITYMLKVILLLFKIVNYNKQFLIMGIIPNFKSLGFSTVKCYWSLIELGSI
Ga0307518_101138221	3300031838	Ectomycorrhiza	MARVFKVVSPLFKVVNYSQQFLIMGIIPNFRPLKFSTIKYYQFLMELNSI
Ga0307518_101264081	3300031838	Ectomycorrhiza	MAHVFKVVSPLFKTVNYSQQFLIIGIIPNFRPLEFSIIKCYXSLIKLNSI
Ga0307518_101314821	3300031838	Ectomycorrhiza	SGIARILKVVLPLFKVVNYSQQFFIISIIPNFKSLKFSAIK
Ga0307518_101678021	3300031838	Ectomycorrhiza	MARVLKVVSPLFKAVDYSQQFLIIGIIPNFRSLEFSTVECY
Ga0307518_101713981	3300031838	Ectomycorrhiza	MSGITRVLKVMSLLFKAVDYSKQFLIIGIILNFRPLEFSAVKCY
Ga0307518_101932451	3300031838	Ectomycorrhiza	LPLFKAVNYSQQFFIVNIIPNFKPLEFSIIECYRSLIELGSV
Ga0307518_102174011	3300031838	Ectomycorrhiza	MSGIAHVLKVVSPLFKVINYSQQFLIMGIIPNFKPLEFSAVKCHQSLVELNSV
Ga0307518_102188061	3300031838	Ectomycorrhiza	MLKVISPLFKAVNYSQQFLIMGIIPNFRSLEFSTIEYY
Ga0307518_102564191	3300031838	Ectomycorrhiza	ISGMACVLKVVSPLFKVVDYSQQFLIIGIILNFRSLEFSTIEYY
Ga0307518_102806961	3300031838	Ectomycorrhiza	FKVMSLLFKVVNYNKQFLIMGIIPNFKSLEFSTIKYY
Ga0307518_102919531	3300031838	Ectomycorrhiza	MSGIARVFKVVSPLFKVVNYSQQFLIMGIIPNFKSLEFSAIKYD
Ga0307518_105445181	3300031838	Ectomycorrhiza	ISGITRVLKVISLLFKAVDYSKQFLIIGIIPNFRPLEFSAVKYY
Ga0307518_105863492	3300031838	Ectomycorrhiza	MLKVVSLLFKIINYSQQFLIMGILPNFKSLEFSIIKY
Ga0307518_106035161	3300031838	Ectomycorrhiza	SGIIYVLKVILLLFKVINYNKQFLIIGIIFNFKLLEFSTIKCYWSLVELNNV
Ga0307507_100000295	3300033179	Ectomycorrhiza	MGGIACVLKVVSPLFKAVNYSQQFLIVGIIPNFRSLEFSAIE
Ga0307507_100001198	3300033179	Ectomycorrhiza	MAYVIKVVLLLFKAVYYSQQFLIVGIIPNFRSLEFSAIEYYQSLVELGSV
Ga0307507_1000015533	3300033179	Ectomycorrhiza	MACVLKVVSPLFKAVNYSQQFLIMSIIPNFRSLEFSAIECY
Ga0307507_100004525	3300033179	Ectomycorrhiza	MSGIARVFKVVPPLFKAVNYSQQFLIISIIPNFRSLEFSAIKYYQSLVELGSVWMPIRL
Ga0307507_1000046814	3300033179	Ectomycorrhiza	MSGIACVLKVMSLLFKTVDYSQQFLIVGIIPNFRPLEFSIIECYWSLVELGSVRIPIRL
Ga0307507_1000063513	3300033179	Ectomycorrhiza	MAYMLKVVLPLFKVLNYSQQFLIIGIIPNFRFLEFSIIECYWSLVELGSI
Ga0307507_100007742	3300033179	Ectomycorrhiza	MACVLKVILPLFKAVNYSQQFLIVGIIPNFRPLEFSAIEYYWSLVELGSV
Ga0307507_100008744	3300033179	Ectomycorrhiza	MSGIAYMLKVMSPLFKVVNYSQQFLIVGIIPNFRPLEFFTIEYYWSLIELGSVQIPIRLQ
Ga0307507_1000099121	3300033179	Ectomycorrhiza	MAYVLKVVSPLFKVVNYGQQFLIVGIIPNFRSLEFSAIEYYRSLVELGSV
Ga0307507_100011741	3300033179	Ectomycorrhiza	MACVLEVVSPLFKVVGYGKQFLVVGIIPNFRSLEFSAIECYWSLVELGSIQIPIRLQ
Ga0307507_1000118110	3300033179	Ectomycorrhiza	MAYILKVVLPLFKVVNYGKQFLVIGIIPNFKFLEFSAIECYRSLVELGSV
Ga0307507_100012044	3300033179	Ectomycorrhiza	MACVLKVVSPLFKVVNYGQQFLVVGIILNFRSLEFSAIEYYQSLVELGSV
Ga0307507_100014023	3300033179	Ectomycorrhiza	MARVLKVVSLLFKAVNYSQQFLIVGIIPNFRSLEFSVIKCYQSLVELGSVQMPIRLQ
Ga0307507_100016204	3300033179	Ectomycorrhiza	VLKVVSPLFKTVDYSKQFLIVGIIPDFRSLEFSAIEYYRSLVELGSVQMPIRLQ
Ga0307507_100017998	3300033179	Ectomycorrhiza	MACVLKVVSLLFKVVNYSKQFLIVGIIPKFKSLEFSIIECYRSLVELGSVRMPIRLQ
Ga0307507_1000184614	3300033179	Ectomycorrhiza	MLKVVLLLFKAVNYSQQFLIIGVIPNFKSLGFSAIECYWSLVELGSV
Ga0307507_100019472	3300033179	Ectomycorrhiza	MAYVLKVVLPLFKAVDYSKQFLVMGIIPNFRSLEFSAIKCYWSLVELGSV
Ga0307507_100019742	3300033179	Ectomycorrhiza	MLKVVLLLFKAVNYGQQFLVVGIIPNFRSLEFSTIKCYRSLVELGSV
Ga0307507_100020326	3300033179	Ectomycorrhiza	MARVLKVVSPLFKVVNYGQQFLVMGVIPNFRSLEFSIVECYWFLMELGSVQMPIRL
Ga0307507_100020637	3300033179	Ectomycorrhiza	VLKVVSLLFKAVNYGKQFLIMGIIPNFRSLEFSAIEYYRSLVELGSV
Ga0307507_1000215714	3300033179	Ectomycorrhiza	MARVLKVVLPLFKAVNYSKQFLIMDIIPNFRSLEFSAIEYYWSLVELGSI
Ga0307507_100022267	3300033179	Ectomycorrhiza	MIIXEYISSMAYVFKVMLPLFKAVDYSQQFLIVGIIPNFRPLEFSAIEYYWSLVELGSVQIPIRLQ
Ga0307507_100022554	3300033179	Ectomycorrhiza	VLKVVSPLFKAVNYSKQFLIMGIIPNFRSLEFSAIEYYRSLVELGSV
Ga0307507_100023783	3300033179	Ectomycorrhiza	MACVLKVVSPLFKAVDYSKQFLIVGIIPNFRSLEFSAIEYYRSLIELGSV
Ga0307507_100025499	3300033179	Ectomycorrhiza	MAYVLEVVSLLFKAVNYSQQFLIVGIIPNFRSLEFSAIECYRSLIKLGSI
Ga0307507_100027734	3300033179	Ectomycorrhiza	MACVLKVVLLLFKVVNYGKQFLIMGIISNFRSLEFSTIKCYQFLVELGSV
Ga0307507_100028723	3300033179	Ectomycorrhiza	MSGMARVLKVVLPLFKVVNYSKQFLIMGIIPNFRSLEFSAIECYRSLVELGSVWMPIRLQ
Ga0307507_1000315510	3300033179	Ectomycorrhiza	MACVLKVMSPLFKAVNYSQQFLIVGIIPNFRPLEFSAVEYY
Ga0307507_100043452	3300033179	Ectomycorrhiza	MARVLKVVLLLFKAVNYSQQFLIVGIIPNFRSLKFSTIEYYWSLMELGSV
Ga0307507_100045424	3300033179	Ectomycorrhiza	MARVLKVVLPLFKAVDYSQQFLIMGIIPNFRSLEFSTIEYYQSLVELGSI
Ga0307507_100048575	3300033179	Ectomycorrhiza	MACVLKVVLPLFKVVNYSKQFLIMGIVPNFRSLEFSAIECYRSLIELGSVRMPIKL
Ga0307507_100051666	3300033179	Ectomycorrhiza	MARVLKVVSLLFKVVDYGKQFLVVGIIPNFRSLEFSAIEYYWSLVELGSVRMPIRL
Ga0307507_100059432	3300033179	Ectomycorrhiza	MARVLKVVLPLFKAVDYGQQFLIMGIIPNFRSLEFSAIECYRSLVELGSVWIPIRL
Ga0307507_100060934	3300033179	Ectomycorrhiza	MACVLKVVLLLFKAVNYGQQFLIIGIISNFRPLEFSTIKYY
Ga0307507_100070721	3300033179	Ectomycorrhiza	MAYVLKVVSLLFKAVNYSQQFLIMSVIPDFRSLEFSAIEYY
Ga0307507_100078613	3300033179	Ectomycorrhiza	MACMLKVVPPLFKAVNYSQQFLIISIIPNFRSLEFSAIECYQSLVELGSI
Ga0307507_103812891	3300033179	Ectomycorrhiza	MAHVLKIILLLFKAVNYSQQFLVVGIIPDFKPLEFSVVKYYWFPIKLGSIQIPIRL
Ga0307507_104377671	3300033179	Ectomycorrhiza	YMLKIILPLFKIVNYSQQFFVMGIIPNFKPLEFFTIKCYWFLVELGSI
Ga0307507_104410541	3300033179	Ectomycorrhiza	MAYMLKVMLLLFKAVDYSQQFFIMGIIPDFRPLEFSAIEC
Ga0307507_105783881	3300033179	Ectomycorrhiza	VLKVISLLFKAVNYSQQFLIIGIIPNFRPLEFSAIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102221

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences