Metagenome Family F102228

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102228
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	47 residues
Representative Sequence	MSRTQAGTPAPMARTAPASAPTEVVNHKSMVPEPGWFNGDRKTFED
Number of Associated Samples	29
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.59 %
% of genes near scaffold ends (potentially truncated)	0.99 %
% of genes from short scaffolds (< 2000 bps)	0.99 %
Associated GOLD sequencing projects	29
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (84.158 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens (70.297 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Fungus → Fungus corpus (70.297 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.05% β-sheet: 0.00% Coil/Unstructured: 95.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF08284	RVP_2	17.82
PF00098	zf-CCHC	13.86
PF00665	rve	7.92
PF00078	RVT_1	2.97
PF13975	gag-asp_proteas	2.97
PF03732	Retrotrans_gag	1.98
PF16297	DUF4939	0.99
PF00385	Chromo	0.99
PF13976	gag_pre-integrs	0.99
PF07727	RVT_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	7.92
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	7.92
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	7.92
COG4584	Transposase	Mobilome: prophages, transposons [X]	7.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
All Organisms	root	All Organisms	15.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
cellular organisms	root	All Organisms → cellular organisms	14.85 %
Viruses	superkingdom	All Organisms → Viruses	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	14.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	14.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	14.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	14.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	14.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	14.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	14.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Agaricomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae	11.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Agaricales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	11.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Agaricaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae	7.92 %
Agaricineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Agaricus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus	5.94 %
Agaricineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Agaricus bisporus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus	5.94 %
Agaricineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.16 %
Agaricus bisporus var. burnettii	varietas	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus → Agaricus bisporus var. burnettii	0.99 %
Agaricineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300011394\|Ga0153970_1000958	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	6755	Open in IMG/M
3300011394\|Ga0153970_1001133	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus → Agaricus bisporus var. burnettii	6301	Open in IMG/M
3300012054\|Ga0154007_1006656	All Organisms → Viruses → Predicted Viral	2431	Open in IMG/M
3300012069\|Ga0153965_1000477	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae	9278	Open in IMG/M
3300012144\|Ga0153996_1001297	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus	10247	Open in IMG/M
3300012995\|Ga0157361_1000346	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	20321	Open in IMG/M
3300012995\|Ga0157361_1000494	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus	15394	Open in IMG/M
3300012995\|Ga0157361_1000666	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae	12665	Open in IMG/M
3300012995\|Ga0157361_1001409	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	8184	Open in IMG/M
3300012998\|Ga0157362_1000280	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus	16590	Open in IMG/M
3300012998\|Ga0157362_1000490	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus	13556	Open in IMG/M
3300012998\|Ga0157362_1000608	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus	12679	Open in IMG/M
3300012998\|Ga0157362_1000882	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	11472	Open in IMG/M
3300012998\|Ga0157362_1009114	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	5728	Open in IMG/M
3300012998\|Ga0157362_1065932	Not Available	1939	Open in IMG/M
3300013000\|Ga0157360_1001307	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricineae	9334	Open in IMG/M
3300013000\|Ga0157360_1003391	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	5727	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Fungi	Host-Associated → Fungi	100.00%

Habitat	Taxonomy	Distribution
Mycelium	Host-Associated → Fungi → Mycelium	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	70.30%
Fungus Garden	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden	29.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300011380	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ020 MetaG	Host-Associated	Open in IMG/M
3300011390	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ016 MetaG	Host-Associated	Open in IMG/M
3300011394	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA054 MetaG	Host-Associated	Open in IMG/M
3300011396	Attine ant fungus gardens microbial communities from Florida, USA - TSFL044 MetaG	Host-Associated	Open in IMG/M
3300011401	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA068 MetaG	Host-Associated	Open in IMG/M
3300012054	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC091 MetaG	Host-Associated	Open in IMG/M
3300012057	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC079 MetaG	Host-Associated	Open in IMG/M
3300012059	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC075 MetaG	Host-Associated	Open in IMG/M
3300012069	Attine ant fungus gardens microbial communities from Florida, USA - TSFL049 MetaG	Host-Associated	Open in IMG/M
3300012070	Attine ant fungus gardens microbial communities from Florida, USA - TSFL047 MetaG	Host-Associated	Open in IMG/M
3300012073	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA063 MetaG	Host-Associated	Open in IMG/M
3300012078	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC083 MetaG	Host-Associated	Open in IMG/M
3300012120	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC082 MetaG	Host-Associated	Open in IMG/M
3300012130	Attine ant fungus gardens microbial communities from Florida, USA - TSFL048 MetaG	Host-Associated	Open in IMG/M
3300012135	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA066 MetaG	Host-Associated	Open in IMG/M
3300012136	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA069 MetaG	Host-Associated	Open in IMG/M
3300012139	Attine ant fungus gardens microbial communities from Florida, USA - TSFL045 MetaG	Host-Associated	Open in IMG/M
3300012141	Attine ant fungus gardens microbial communities from Florida, USA - TSFL042 MetaG	Host-Associated	Open in IMG/M
3300012144	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC080 MetaG	Host-Associated	Open in IMG/M
3300012150	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ029 MetaG	Host-Associated	Open in IMG/M
3300012165	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ026 MetaG	Host-Associated	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012674	Attine ant fungus gardens microbial communities from Florida, USA - TSFL046 MetaG	Host-Associated	Open in IMG/M
3300012995	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM2	Host-Associated	Open in IMG/M
3300012998	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM3	Host-Associated	Open in IMG/M
3300012999	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM1	Host-Associated	Open in IMG/M
3300013000	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM1	Host-Associated	Open in IMG/M
3300013001	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM3	Host-Associated	Open in IMG/M
3300013002	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta sexdens ASBM2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0153936_1019582	3300011380	Attine Ant Fungus Gardens	MSRTQADIPVPVARMASTSALIEIVNHKSMVPESGWFNRDRKTFED*
Ga0153932_10397672	3300011390	Attine Ant Fungus Gardens	SRTQADIPVPVARMASTSALIEIVNHKSMVPESGWFNRDRKTFED*
Ga0153970_100000517	3300011394	Attine Ant Fungus Gardens	MSRTQAGTLAPITRITSVLVPTEIVNHKSMVLEPGWFNGDKKTFED*
Ga0153970_100023011	3300011394	Attine Ant Fungus Gardens	MPGTYVGTPTPIARTVPVSAKVINHKSIVPKPGWFTGNRKTFEDW*
Ga0153970_10005132	3300011394	Attine Ant Fungus Gardens	MSGTQAGTPAPMAKMASTSALTEMVNHKSMVPEPRWFNGDRKMFEDW*
Ga0153970_10009582	3300011394	Attine Ant Fungus Gardens	MSGTQADTPVPMARTAPAPAPTEVVNHKSMVPEPGWFNRNRKMFKDW*
Ga0153970_10011331	3300011394	Attine Ant Fungus Gardens	SDAPSVGQPKQNMSGTRAGTPAPMARTAPTEVVNHKSMVPEPGWFNGDRKTFEDW*
Ga0153970_10014475	3300011394	Attine Ant Fungus Gardens	MSGTQAGTPAPMARTALASVPTEVVNHKLMVPEPGWFNGDRKTFED*
Ga0153970_10019962	3300011394	Attine Ant Fungus Gardens	MSRTQAGTPAPMARTAPVSAPTEVINHKSMVPEPGWFNGDRKIFEDW*
Ga0153970_10021052	3300011394	Attine Ant Fungus Gardens	MSRTQAGTQAPMARTAPASAPTEVVNHKSMVPKPKWFNRDRKIFKDW*
Ga0153970_10025554	3300011394	Attine Ant Fungus Gardens	MSGTRAGTPAPMARTAPASAPTVVVNHKSIVPEPGWFNGDRKTFKDW*
Ga0153970_10029195	3300011394	Attine Ant Fungus Gardens	MSGTRSGTPAPMARTAPVSAPVEMVNHKSMVPEPGWFNGDRKTFEDW*
Ga0153970_10031372	3300011394	Attine Ant Fungus Gardens	MSRTRAGTLAPMARIAPAVAPTEVVNHKLMVPEPGWFNGDKKTFEN*
Ga0153970_10046941	3300011394	Attine Ant Fungus Gardens	MSRTQAGIPAPMARTTPASAPTEVVNHKLMVPEPGWFNGDRKTFEDW*
Ga0153970_10114513	3300011394	Attine Ant Fungus Gardens	MSRTQAGTPALMARMAPALAPTEVVNHKSMVLEPGWFNGDRKIFKD*
Ga0153970_10138422	3300011394	Attine Ant Fungus Gardens	MSRTQVGIPALMVRTAPASAPIEVVNHKSMVPEPGWFNRDRKTFED*
Ga0153970_10477981	3300011394	Attine Ant Fungus Gardens	MSRTQAGTLAPMARMAPASALTEVVNHKSMVPEPGWFNRDRKIFKD*
Ga0153960_10092273	3300011396	Attine Ant Fungus Gardens	MSRTQAGTPVLVTRIALVPAPTEVVNHKSMVPEPEWFNRNRKTFKDW*
Ga0153960_10217551	3300011396	Attine Ant Fungus Gardens	MSRTRAGTPALIARMIPALAPTEVVNHKSMVPEPKWFNGDRKIFEDW*
Ga0153960_10353272	3300011396	Attine Ant Fungus Gardens	MSRTQVGIPAPMVRTAPASAPIEVVNHKSMVPEPGWFNGDRKTFED*
Ga0153984_10002921	3300011401	Attine Ant Fungus Gardens	MSKTQAGTPAPIARIALVPVLTEVVNHKSMVPEPGWFNGDRKIFKD*
Ga0153984_10010824	3300011401	Attine Ant Fungus Gardens	MPGTYVGTPTPMARTVPVLAKVINHKSIVPKPGWFTGNRKTFEDW*
Ga0153984_10954571	3300011401	Attine Ant Fungus Gardens	MSRTQAGTPAPMARMAPASALTEVVNHKSMVPEPGWFNRDRKIFKD*
Ga0154007_10012811	3300012054	Attine Ant Fungus Gardens	MSGTRSDTPAPMARTAPVLAPAEVVNHKSIVPEPEWFNGDRKTFEDW*
Ga0154007_10014487	3300012054	Attine Ant Fungus Gardens	MSRTQAGIPAPMARITPASAPTEVVNHKLMVPEPGWFNGDRKTFEDW*
Ga0154007_10016036	3300012054	Attine Ant Fungus Gardens	MSGTQADTPVPMARTAPAPAPTEVVNHKSMVPEPGWFNRNRKTFKDW*
Ga0154007_10031992	3300012054	Attine Ant Fungus Gardens	MSRTQAGTPAPMARTAPVSAPTEVINHKSMVPEPGWFNGDRKTFEDW*
Ga0154007_10060892	3300012054	Attine Ant Fungus Gardens	MSRTQVGIPAPMARTAPASAPIEVVNHKSMVLEPGWFNGDRKTFED*
Ga0154007_10066562	3300012054	Attine Ant Fungus Gardens	MSRTRAGTPAPIARTVPASAPTKVVNHKSIVPEPGWFNGDRKTFEDW*
Ga0154007_10073515	3300012054	Attine Ant Fungus Gardens	MSRTQAGTLAPMVRTALASAPTEVVNHKSMVPKPRWFNGDRKTFEDW*
Ga0154007_10207562	3300012054	Attine Ant Fungus Gardens	MSRTQVGIPAPMVRTAPASVPIEVVNHKSMVPEPGWFNGDRKTFED*
Ga0153995_10479851	3300012057	Attine Ant Fungus Gardens	MSRTQAGTPAPMARMAPALAPTEVVNHKSMVPEPGWFNGDRKIFKD*
Ga0153991_10029461	3300012059	Attine Ant Fungus Gardens	MSGTRAGTPAPMARTAPTEVVNHKSMVPEPGWFNGDRKTFEDW*
Ga0153965_100005317	3300012069	Attine Ant Fungus Gardens	MPGTHVGTPAPMARTVPALAKVINHKSMVLKPRWFTGDRKMFEDW*
Ga0153965_100047720	3300012069	Attine Ant Fungus Gardens	MSRTQVGIPAPIEVVNHKSMVPEPGWFNRDRKTFED*
Ga0153965_100060717	3300012069	Attine Ant Fungus Gardens	MSRTRAGTPALMTRTVPALAPTEVVNHKSMVPEPKWFNGDRKIFEDW*
Ga0153965_10030929	3300012069	Attine Ant Fungus Gardens	MSRTQVGIPAPMVRTAPASAPIEIVNHKSMVPEPEWFNGDRKIFED*
Ga0153965_10031751	3300012069	Attine Ant Fungus Gardens	MSGTQAGTLAPMARMALASAPTEVVNHKSMVPEPGWFNGDKKTFKD*
Ga0153965_10057022	3300012069	Attine Ant Fungus Gardens	MSRTRAGTLAPMARIAPAVAPTEVVNHKLMVLEPGWFNGDKKTFEN*
Ga0153965_10223134	3300012069	Attine Ant Fungus Gardens	MSGTHTGTPAPIARIAPVSIPVEVVNHKSMVPEPGWFNGNRKMFEDW*
Ga0153965_10337862	3300012069	Attine Ant Fungus Gardens	MSRTRAGTLAPIARTVLASAPTKVVNHKSMVPEPGWFNGDRKTFEDW*
Ga0153965_10347411	3300012069	Attine Ant Fungus Gardens	MSGTRAGTPALMARTAPASAPTEVVNHKSMVPEPGWFNGDRKTFEDW*
Ga0153965_10373411	3300012069	Attine Ant Fungus Gardens	MSRTQAGTLAPMARMAPASAPTEVVNHKSMVPEPGWFNRDRKIFKD*
Ga0153965_10571331	3300012069	Attine Ant Fungus Gardens	MSRTQAGTQAPMARTAPASAPTEVVNHKSMVPKPEWFNGDRKIFKDW*
Ga0153965_10660091	3300012069	Attine Ant Fungus Gardens	MSRTQAGTPAPMARMAPVLAPTEVVNHKSMVPEPGWFNGDRKIFKD*
Ga0153963_10003822	3300012070	Attine Ant Fungus Gardens	MSGTQAGTLAPMAKMASTSALTEMVNHKSMVPEPRWFNGDRKMFEDW*
Ga0153963_10034414	3300012070	Attine Ant Fungus Gardens	MSGTRAGTPAPMARTAPASVPTVVVNHKSIVPEPGWFNGDRKTFKDW*
Ga0153963_10129721	3300012070	Attine Ant Fungus Gardens	MSRTQAGTPAPMARTAPASAPTEVVNHKSMVPEPGWFNGDRKTFED*
Ga0153963_10276411	3300012070	Attine Ant Fungus Gardens	MSRTQAGTPAPIARMAPASALTEVVNHKSMVPEPGWFNRDRKIFKD*
Ga0153979_10585551	3300012073	Attine Ant Fungus Gardens	MSGTQAGTLALMARTVPALAPTEVVNHKSMVPEPGWFNGDRKTFEDW*
Ga0153999_10528771	3300012078	Attine Ant Fungus Gardens	MSGIQAGILAPIARMVSAPVPTDVVNHKSMVPESEWFNGDRKTFKDWWK
Ga0153999_10722511	3300012078	Attine Ant Fungus Gardens	MSRTRAGTPAPIARTVPASAPTKVVNHKSMVPEPGWFNGDRKTFEDW*
Ga0153998_10016568	3300012120	Attine Ant Fungus Gardens	MSGICLGTPALMARMAPALASAEVVNHKLMVPEPGWFNSDRKTFEDWWR*
Ga0153964_10166042	3300012130	Attine Ant Fungus Gardens	MFRTRAGTPAPMARTAPAAAPTEVVNHKSMVPEPGWFNRDRKTFEDW*
Ga0153964_10515031	3300012130	Attine Ant Fungus Gardens	MSGTRAGTLALMARTVPALAPTEVVNHKSMVPEPGWFNG
Ga0153982_10539301	3300012135	Attine Ant Fungus Gardens	MSGTRAGTLALMARTVPALAPTEVVNHKSMVPEPGWFNGDRKTFEDW*
Ga0153985_100073011	3300012136	Attine Ant Fungus Gardens	MSRTQAGTPAPMAKMASTSALTEMVNHKSMVPEPRWFNGDRKMFEDW*
Ga0153985_10075351	3300012136	Attine Ant Fungus Gardens	MSRTQAGIPAPMARTTPASAPTEVVNHKLMVPEPGWFNGDRKTFEDW
Ga0153961_10153441	3300012139	Attine Ant Fungus Gardens	MSRTQAGTQVPMARTAPASAPTEVVNHKSMVPKPEWFNGDRKIFKDW*
Ga0153961_10176721	3300012139	Attine Ant Fungus Gardens	MSGTHTGTPAPIARIAPISIPVEVVNHKSMVPEPGWFNGNRKMFEDW*
Ga0153958_10054632	3300012141	Attine Ant Fungus Gardens	MFRTQAGTPAPMTRMAPASAPTEVVNHKSMVPEPGWFNGDRKIFKD*
Ga0153996_10012973	3300012144	Attine Ant Fungus Gardens	MSGTQADTPVPMARTAPAPAPTEVVNYKSMVPEPGWFNRNRKTFKDW*
Ga0153996_100273311	3300012144	Attine Ant Fungus Gardens	MSRTRAGTLALMARTVPALAPTEVVNHKSMVPEPKWFNGDRKIFEDW*
Ga0153996_10036388	3300012144	Attine Ant Fungus Gardens	MSRTHAGIPALIARMAPAPAPAEVINYKLMVPEPGWFNENRKTFKDW*
Ga0153996_10132063	3300012144	Attine Ant Fungus Gardens	MSGTCTGTLAPMARTAPASALAEVINHKLMVSEPGWFNGDRKTFED*
Ga0153945_10628601	3300012150	Attine Ant Fungus Gardens	MSRTQAGILVPVARMASASALIEIVNHKSMVPEPGWFNRDRKTFEDWWRAMKLYLKAN
Ga0153942_10541322	3300012165	Attine Ant Fungus Gardens	MSRTQAGILVPVARMASASALIEIVNHKSMVPEPGWFNRDRKTFED*
Ga0153990_10141324	3300012169	Attine Ant Fungus Gardens	VLSVGQPKQNMSRTQAGTPVLVTRIALVPAPTEVVNHKSMVPEPEWFNRNRKTFKDW*
Ga0153990_10420411	3300012169	Attine Ant Fungus Gardens	EQPKQNMSRTQVGIPAPMARTALASAPTEVVNHKSMVLEPGWFNGDRKTFED*
Ga0153962_10002267	3300012674	Attine Ant Fungus Gardens	MSRTQTGTLAPMVRTALASAPTEVVNHKSMVPKPRWFNGDRKTFEDW*
Ga0153962_10011362	3300012674	Attine Ant Fungus Gardens	MSGTQADTPVPMARTAPAPVPTEVVNHKSMVPEPGWFNRNRKMFKDW*
Ga0157361_100034627	3300012995	Fungus Garden	MPALIARTLVLAPTEVANHKSIVPEPRWFNKNKKMFEDW*
Ga0157361_100049420	3300012995	Fungus Garden	MSRTRAGTPAPMARTAPAVVPTEVVNHKSMVPEPGWFNGDRKTFEN*
Ga0157361_100060110	3300012995	Fungus Garden	MSGTRAGTPAPMARTALAATPTEVVNHKSMVPEPRWFNGDRKTFED*
Ga0157361_10006666	3300012995	Fungus Garden	MSGTYTGILVLMARTVPALAPIEVINYKLMVLEPRWLNGDKKSFEDW*
Ga0157361_10012652	3300012995	Fungus Garden	MSRTCSGTPAPMARTAPASAPAEVVNYKSMVPEPRWSNRDRKTFEDW*
Ga0157361_10014093	3300012995	Fungus Garden	MSGTRADTPALMARTAPASAPTEVVNHKSMVPEPGWFNRDRKTFKDW*
Ga0157361_10014133	3300012995	Fungus Garden	VGKPKQNISRTQASTPVLMTRTVLVSVPIEVVNHKSMVPEPRWFNRDRKIFEDW*
Ga0157361_10016321	3300012995	Fungus Garden	MSRTQAGTLAPITRITSVPVPTEIVNHKSMVLEPGWFNGDKKTFED*
Ga0157361_10248771	3300012995	Fungus Garden	MSRTQAGTPAPMVRMAPASAPTEVVNHKSMVPKPRWFNGDRKTFED*
Ga0157361_10248781	3300012995	Fungus Garden	MSRTQAGTPVPMVRMAPASAPTEVVNHKSMVPKPRWFNGDRKTFEDW*
Ga0157362_10002806	3300012998	Fungus Garden	MSRTQAGTPAPIARTALASAPTEVVNHKSMVPEPGWFNGDRKTFEN*
Ga0157362_10004907	3300012998	Fungus Garden	MSGTCAGTPVLTAKMAPASAPAEVINHKLMVSEPGWFNGDRKMFEDW*
Ga0157362_100060812	3300012998	Fungus Garden	MSRIRLGTPAPMARTIPVSALAEVVNHKSMVPEPGWFNGDRKTFEDW*
Ga0157362_10008829	3300012998	Fungus Garden	MSRTRAGTPVPMARMAPAAAPTEVVNHKLMVLEPRWFNKDRKMFEDW*
Ga0157362_10091146	3300012998	Fungus Garden	MSRTRAGTPAPMARTAPTAAPTEVVNHKSMVPEPRWFNGNRKIFED*
Ga0157362_10136062	3300012998	Fungus Garden	MSGTRAGTPAPMARTAPAPAPTEVVNHKSMVPEPGWFNGDRKTFKD*
Ga0157362_10659322	3300012998	Fungus Garden	MSGTCVGTPVPIARTAPVSALTEVINHKSIVPEPEWFNRDRKTFED*
Ga0157362_11245272	3300012998	Fungus Garden	MSGTCSGTPVPIARMAPALAPVEVINHKSMVPEPEWFNGDKKTFEDW*
Ga0157362_11672781	3300012998	Fungus Garden	MSRTRSGTPAPIARTAPVSTPAEVVNHKSMVPEPGWFNGDRKTFEDW*
Ga0157362_12186311	3300012998	Fungus Garden	MSGTRAGTPAPMARTAPVSAPAEVVNHKSMVPEPGWFNGDRKTFEDWWRAMKLY
Ga0157363_11212222	3300012999	Fungus Garden	MSGTCSGTPAPMARMAPVSAPAEVVNHKSMVPEPGWFNGDRKTFED*
Ga0157363_11761272	3300012999	Fungus Garden	MSRIRAGTPVPIARMALVPAPTEMVNHKSMVSEPGWFNGDRKMFEN*
Ga0157360_10012802	3300013000	Fungus Garden	MSRTCSGTPAPMARTAPASAPAEVVNYKSMVPEPRWSNRDRKAFEDW*
Ga0157360_10013072	3300013000	Fungus Garden	MSGTCVGTPVPIARTAPVSEVINHKSIVPEPKWFNRDRKTFED*
Ga0157360_10033914	3300013000	Fungus Garden	MSRTRAGTPAPMARTAPTAAPTEVVNHKSIVPEPRWFNGNRKIFED*
Ga0157360_10089113	3300013000	Fungus Garden	MSGTRSGTPAPMARMALAPAEVVNHKSVVPETGWFNGDKKTFEDW*
Ga0157360_10206761	3300013000	Fungus Garden	MSRTRAGTPAPMARTAPASAPTEVVNHKSMVPESGWFNGDRKTFED*
Ga0157360_10223012	3300013000	Fungus Garden	MSRIRAGTPVPIARMALVLAPTEMVNHKSMVSEPGWFNGDRKMFEN*
Ga0157365_102658581	3300013001	Fungus Garden	MSETHSGTPAPMARTVPVSAPAKVVNHKLMVLEPVWFNGDRKMFEDWWRAI
Ga0157364_11876541	3300013002	Fungus Garden	MSRTQAGTPAPMVRMAPASAPTEVVNHKSMVPKPRWFNGDRKTFED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102228

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences