Metagenome Family F102431

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102431
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	81 residues
Representative Sequence	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFIKQEHGPPRGSKQAKTDVLLTTVLGPLRS
Number of Associated Samples	20
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.00 %
% of genes near scaffold ends (potentially truncated)	0.99 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	11
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (90.099 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Marine (76.238 % of family members)
Environment Ontology (ENVO)	Unclassified (89.109 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Surface (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00078	RVT_1	2.97
PF00443	UCH	2.97
PF13359	DDE_Tnp_4	1.98
PF00077	RVP	1.98
PF04937	DUF659	1.98
PF00665	rve	1.98
PF04827	Plant_tran	1.98
PF03184	DDE_1	1.98
PF00125	Histone	1.98
PF02992	Transposase_21	0.99
PF13604	AAA_30	0.99
PF00071	Ras	0.99
PF00069	Pkinase	0.99
PF13374	TPR_10	0.99
PF10502	Peptidase_S26	0.99
PF03208	PRA1	0.99
PF13843	DDE_Tnp_1_7	0.99
PF02732	ERCC4	0.99
PF05699	Dimer_Tnp_hAT	0.99
PF13392	HNH_3	0.99
PF00400	WD40	0.99
PF00098	zf-CCHC	0.99
PF01079	Hint	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.96
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	2.97
COG5533	Ubiquitin C-terminal hydrolase	Posttranslational modification, protein turnover, chaperones [O]	2.97
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.98
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.98
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.98
COG3577	Predicted aspartyl protease	General function prediction only [R]	1.98
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.98
COG1948	ERCC4-type crossover junction endonuclease	Replication, recombination and repair [L]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.10 %
Rhodophyta	phylum	Rhodophyta	8.91 %
All Organisms	root	All Organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.10 %
Bangiophyceae	class	Rhodophyta → Bangiophyceae	8.91 %
cellular organisms	root	All Organisms → cellular organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.10 %
Bangiales	order	Rhodophyta → Bangiophyceae → Bangiales	8.91 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.10 %
Bangiaceae	family	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae	8.91 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.10 %
Porphyra	genus	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra	8.91 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.10 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	8.91 %
Oomycota	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.10 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	8.91 %
Pythiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.10 %
Porphyra umbilicalis	species	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	8.91 %
Pythiaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae	0.99 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004791\|Ga0068459_100353	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	31950	Open in IMG/M
3300004791\|Ga0068459_100371	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	29247	Open in IMG/M
3300005647\|Ga0079203_1006682	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	6558	Open in IMG/M
3300005647\|Ga0079203_1016930	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3614	Open in IMG/M
3300009073\|Ga0114957_1002762	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	16386	Open in IMG/M
3300027262\|Ga0209303_1010555	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	3229	Open in IMG/M
3300027509\|Ga0209187_1006365	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	7863	Open in IMG/M
3300027509\|Ga0209187_1006763	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	7475	Open in IMG/M
3300027509\|Ga0209187_1009725	Rhodophyta → Bangiophyceae → Bangiales → Bangiaceae → Porphyra → Porphyra umbilicalis	5585	Open in IMG/M
3300027554\|Ga0209831_1007029	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Pythiales → Pythiaceae	8046	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	86.14%
Environmental	Environmental	13.86%

Habitat	Taxonomy	Distribution
Algae	Host-Associated → Algae	86.14%
Aquatic	Environmental → Aquatic	13.86%

Habitat	Taxonomy	Distribution
Red Algae	Host-Associated → Algae → Red Algae	86.14%
Marine	Environmental → Aquatic → Marine	13.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Algae → Red Algae → Unclassified	86.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Algae → Red Algae → Unclassified → Unclassified	86.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.86%

Habitat	Taxonomy	Distribution
Marine	Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Marine	76.24%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	13.86%
Porphyra Umbilicalis	Host-Associated → Algae → Red Algae → Unclassified → Unclassified → Porphyra Umbilicalis	9.90%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004791	Porphyra umbilicalis microbial communities from the coast of Maine, USA, in Atlantic Ocean	Host-Associated	Open in IMG/M
3300005647	Marine algae microbial communities from Bantry Bay - Bantry Bay, Ireland	Environmental	Open in IMG/M
3300005651	Marine algae microbial communities from Blueberry Hill - Blueberry Hill, Maine	Environmental	Open in IMG/M
3300005654	Porphyra Blade Metagenome Co-Assembly	Environmental	Open in IMG/M
3300009072	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male1 metaG	Host-Associated	Open in IMG/M
3300009073	Marine algal microbial communities from Bantry Bay, Ireland - BantryBay_4 metaG	Host-Associated	Open in IMG/M
3300009410	Marine algal microbial communities from Porto, Portugal - Porto_5 metaG	Host-Associated	Open in IMG/M
3300009415	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex1 metaG	Host-Associated	Open in IMG/M
3300009417	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male2 metaG	Host-Associated	Open in IMG/M
3300009421	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex2 metaG	Host-Associated	Open in IMG/M
3300009439	Marine algal microbial communities from Maine, USA - Maine_Asex4_metaG	Host-Associated	Open in IMG/M
3300009446	Marine algal microbial communities from Maine, USA - Maine_Asex2 metaG	Host-Associated	Open in IMG/M
3300027009	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male1 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027028	Marine algal microbial communities from Porto, Portugal - Porto_5 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027262	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex1 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027325	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Male2 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027498	Marine algal microbial communities from Sidmouth, United Kingdom - Sidmouth_Asex2 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027509	Marine algal microbial communities from Bantry Bay, Ireland - BantryBay_4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027554	Marine algal microbial communities from Maine, USA - Maine_Asex4_metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027623	Marine algal microbial communities from Maine, USA - Maine_Asex2 metaG (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068459_10012224	3300004791	Porphyra Umbilicalis	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFLKQEHGPPRGSKQAKKDVLLTMVLDSLRCLAAAPRRVCDTS*
Ga0068459_1002014	3300004791	Porphyra Umbilicalis	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFLKQEHGPPKGSKQAKTDVLLTTVLGPLRCAIDCHHAARRAARPP
Ga0068459_10031129	3300004791	Porphyra Umbilicalis	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFIKQEHGPPRGSKQAKTDVLLTTVLGPLRS
Ga0068459_1003538	3300004791	Porphyra Umbilicalis	MALLAGAMCGVRNNSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFFKQEHGPPRGSKQAKTDVLLTTVLGPLRRQHVGTGCAH*
Ga0068459_10037122	3300004791	Porphyra Umbilicalis	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGGDLFFAQEICFFKQEHGPPRGSKQAKTDVLLTTVLGPLRCEHECRLPPLKRRTSPLI*
Ga0068459_10049525	3300004791	Porphyra Umbilicalis	MALLAVAMCGVRNDSCSRKDKYAKTSHGMASESLSRGVDLFFAQEFCFLNQEHGPPRGSKQAKTDVLLTMVVGSL*
Ga0068459_1007065	3300004791	Porphyra Umbilicalis	MALLAGAMCGVRNDSCSRKHRYAWTSHGMASESLSRGVDLFFAQEFSFFSQEHGPPRGSKQAETDVLLTTVLGPLRSDLARQETPKCNQVSNVPI*
Ga0068459_10085120	3300004791	Porphyra Umbilicalis	MALLAGGMCGRRNDSCSREHKCARTSHGIASESVSRGVDLFLTQEFCFFKQEHGPPRGSKQAKTDVLLTTVAGPLRSGPADGSQRR*
Ga0068459_10153011	3300004791	Porphyra Umbilicalis	MALLAGAMCGVRNDSCSRKHKYARTLHGMASESLSRGVDLFFSQEFCFFKQGHAPPRGSKQAKTDVLLTTVLCPLRRGES*
Ga0068459_1046945	3300004791	Porphyra Umbilicalis	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFLKQEPGPPRGSKQAKTDVLLTMVLGSLR*
Ga0079203_10066826	3300005647	Marine	MALLAGAMCGVRIDSCSRKHKYARTSHWMASESLSMGVDLFFAQEFCFLKQEHGPPRGSKQAKTDVLLRTVLGPLR*
Ga0079203_10126402	3300005647	Marine	MAMALLAGAMYGVRNDSCSRKHKYARTSHGMASEILSRGVDLFFAQEFCFFKQKHGPSRGSKQAKTDELLTTARKNPRTLN*
Ga0079203_10145332	3300005647	Marine	MCGVRNDSRSRKHKYARTSHGMASESLSTEVNHVFAQDFCFLKQEHGPPRGSKHGQTDVLLTTVRGSQRCVKAGQD*
Ga0079203_10169303	3300005647	Marine	MALLAGAMCGVRNDSCSRKRKYAKTSHEMASESLSRGVDLFFAQEFCFLNQEHGSPRGSKQAKTDVLLTMVLGSLRWSGIRTPRIC*
Ga0079203_10466382	3300005647	Marine	MALLAGGMCGRRNDSCSRKHKCARTSHGIASESVSRGVDLFLTQEFCFFKQEHGPPRGSKQAKTDVLLTTVVGPLRSGPADGSQRR*
Ga0079203_11427081	3300005647	Marine	MALLAGAMFGVSNDSCSREHKYARTSHGMASESLSRGVDLFFALEFCFFKQEHGPPRGSKQAKTDVLLTTILGPLRCL*
Ga0079203_11639091	3300005647	Marine	MALLAGAMCEVRNDSCSRKHKYARTSHGMASESLSSAVDLCFAQEFCFFKQEHGPPRGSKQAKTDVLLTMVLGSLRW
Ga0079203_11856762	3300005647	Marine	GAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQELCFFKQEHGPPRGSKQAKTDVLLTTVLGPLRCPWHGHDVTARVVASLA*
Ga0079202_100458551	3300005651	Marine	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSSGVDLFFAQEFCFFKQEHGPPRGSKQVKTD
Ga0079202_100537492	3300005651	Marine	MALLAGAMCGVRNDSCSREHKYARTSHGMASESLSRGVDLFFAQEFCFFKQEHGPPRGSKQAKSDVLLTTVLGPLRCAPR*
Ga0079202_101375161	3300005651	Marine	MALLAGAMCGVRNDSCSLKHNYARTSHGMASESLSRGVDLFFAQEICFFKQEHGPPRGSKQAKTDVLLTTVHA*
Ga0079204_101550361	3300005654	Marine	MARLAGAMCGVRNDSSSRKHKYARTSQGMASESLSRGVDLFFAQKVWLIKQEHGPPRGSKQAKTEMLLTTVQGPLRSER
Ga0079204_103896772	3300005654	Marine	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSSGVDLFFAQEFCFFKQEHGPPRGSKQVKTDV
Ga0079204_104247951	3300005654	Marine	MALLAGARCGVRNDSCSRKHKYARTSHGMASESLSSGVDLFFAQEFCFFKQEHGPPRGSKQVKTDV
Ga0115030_10004084	3300009072	Marine	MALLAGAMCGGRHDSCSRKHKYARTSQGMGSESLSSGVDLFFAPEFCFFKQEHGPRSGSEQARTDVLLTTVLGPLRSE*
Ga0115030_100089319	3300009072	Marine	MALLADAMCGGRHDSCSRKHKYARTSHGMRSESLSRGVDLFFAQEFCLFKQEHGPPSGSEQARTDVL*
Ga0115030_10015948	3300009072	Marine	MCGGRHDSCSREHKYARTSHGMGSESLSRGVDLLFAQEFCSFKQEHGPTSGTEQAKTDVLLATVLGPLRCDPGGPPTK*
Ga0114957_100276218	3300009073	Marine	VALLAGAMCGVRNDSCSRKHKYARTSHEMASESLSRGVDLFFPQEFCFFKQEHGPPRGSKQARTDVLLTTVLGPLRYPPPPP*
Ga0114957_100318911	3300009073	Marine	MALLAGAVCGVRNDSCSRKHNYPRTSNGMVSESLSRGVHPFCAQEFCFFKQEQGPPRGSKQVKIDVLLTTVLGPLHPGGGSRLERR*
Ga0114957_100729512	3300009073	Marine	MDLLAGAICGVRNDSCSRKHKYVRTWHGMAFESLSRGVDLSFAQEFCVIKPEHGPAIGSKQVKTDVLLATVLGPLRGERRGSRGGSK*
Ga0114957_10079216	3300009073	Marine	MALLAGRMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFIKQEHGPPRGSKQAKTDVLLTTVVGPLRS*
Ga0114957_10116641	3300009073	Marine	MCGVRNDSCSRKHKYARTSHGMASESLSTEVNHVFAQDFCFLKQEHGPPRGSKQGQTDVLLTTVRGSQRCVKAGQD*
Ga0114957_10184632	3300009073	Marine	MALLAGAMCGVRNDSCSRKHRYAWTSHGMASESLSRGVDLFFAQEFSFFGQEHGPPRGSKQAKTDVLLTTVLGPLRSDLARQETPECNQVSNVPI*
Ga0114957_10198435	3300009073	Marine	VCTLRNDSCSHKRKLARTSHGMAFESLSRGVDLIFAQKMCFIKQEHGPPRDSKQAKKDVLLTTVLGPLRRHRRDGCLS*
Ga0114957_10608062	3300009073	Marine	MALLAGPMCGVRNDSCSRKLKIARTSHGMASESLSRGVDLFFAQEFCFIEQEHGPPRGSKQAKTDVLLTTVMGPLRCRDSRAIFT*
Ga0114957_12100561	3300009073	Marine	MALLAGAMCGVMNGSCSRKHKDARTSHGMASESLSRGVDLFFAQEFCFIKQDHGSPRGSKKEKKDVFLTTVLGPLHWGGGAL
Ga0114957_12445981	3300009073	Marine	MALLAVAMCGVRNDSCSRKDKYAKTSHGMASESLSRGVDLFFAQEFCFLNQEHGPPRGSKQAKTDVLLTMVLGSL*
Ga0114955_10006352	3300009410	Marine	MALLAGAMCGGRHDSCSRKHKYARTSQGMGSESLSSGVDLFFAQEFCFFKQEHGPRSGSEQARTDVLLTTVLGPLRSE*
Ga0114955_10015725	3300009410	Marine	VALLVGAMCGGRHDSCSREHKYARTSHEMGSESLSRGVDLLFAQEFSFFKQEHGRTSGTEQAKTDVLLTTVLGPLRCDPGGPPPK*
Ga0115029_10056231	3300009415	Marine	MCGVRNDSYSRKHKYARTSHAIASESLSREVNHVFAQDFCFLKQEHGPPRGSKQGQTDVLLTTVRGSQRCVKAGQD*
Ga0115029_10253762	3300009415	Marine	MALLAGAMCGVRIDSCSRKHKYARTSHSMASESLSMGVDLFFAQEFCFLKQEHGPPRGSKQAKTDVLLRTVLGPLR*
Ga0115029_11355081	3300009415	Marine	MALLAGAMCGVRNDSCSRKHRYARTPHGMASESLSRGVDLFFAQEFCFFKQEHGPPRGSKQAKTDVLLTTVLGPLRCGRRE
Ga0114953_10034514	3300009417	Marine	MDLLSGAMCGGRHDSCSRKHRYARTSHGMDFESPSRSVSSFFAQDFFFFKQEHGRPGGSEHKKADVLLTTNMGPVRCG*
Ga0114952_12462171	3300009421	Marine	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGLDLFFAQEICFLKQEHGPPRGSKQAKSDVLLTTVLGPLRSWERPWRLARPRRRRRP
Ga0115031_100654411	3300009439	Marine	MALLAGAMCGVRNDSCSRKHKYARTLHGMASESLSRGVDLFFSQEFCFFKQGHAPPRGSKQAKTDVLLTTVLGPLRRGES*
Ga0115031_10124001	3300009439	Marine	MALLAGAMCGVMNGSCSRKHKDAMTSHGMASESLSRGVDLFFAQEFCFIKQEHGSPRGSKQAKTDVLLTTVLGPLRWGGGALAGGNQPRG*
Ga0114956_12736961	3300009446	Marine	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESMSRGVDLIFAQEFCFFKQEHGPSRGSKQAKTDVLLTKVLGPLRRQGDCHNPNSAV*
Ga0209093_100028626	3300027009	Marine	MCGGRHDSCSREHKYARTSHGMGSESLSRGVDLLFAQEFCSFKQEHGPTSGTEQAKTDVLLATVLGPLRCDPGGPPTK
Ga0209093_10007784	3300027009	Marine	MALLAGAMCGGRHDSCSRKHKYARTSQGMGSESLSSGVDLFFAPEFCFFKQEHGPRSGSEQARTDVLLTTVLGPLRSE
Ga0209093_10008006	3300027009	Marine	MALLADAMCGGRHDSCSRKHKYARTSHGMRSESLSRGVDLFFAQEFCLFKQEHGPPSGSEQARTDVL
Ga0209093_10011338	3300027009	Marine	MALLADAMCRGRHDSCYRKHKYARASHGMGSESLSRGVDLFFAQEFCFLKQEHGPPSGSEQAKTDVLLTTVLGPLRWDCF
Ga0209295_10011413	3300027028	Marine	VALLVGAMCGGRHDSCSREHKYARTSHEMGSESLSRGVDLLFAQEFSFFKQEHGRTSGTEQAKTDVLLTTVLGPLRCDPGGPPPK
Ga0209295_10020452	3300027028	Marine	MALLAGAMCGGRHDSCSRKHKYARTSQGMGSESLSSGVDLFFAQEFCFFKQEHGPRSGSEQARTDVLLTTVLGPLRSE
Ga0209303_100350610	3300027262	Marine	MALLAGALCGVRNDSCSRRHKYARTSHGMASESLSRGFDLLFAQEFCFLKQEHGPPRGSKQAKTDVLLTTVLGSLRWCNCVIPYVL
Ga0209303_10105552	3300027262	Marine	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLIFAQEFCFFKQEHGPPRGSKQAKTDVLLTTVLGPLRRQGDCHNPNSAV
Ga0209303_10127543	3300027262	Marine	MALLAGAMCGVRNDSCSRKHRYAWTSHGMASESLSRGVDLFFAQEFSFFSQEHGPPRGSKQAETDVLLTTVLGPLRSDLARQETPKCNQVSNVPI
Ga0209303_10271642	3300027262	Marine	MALLAGAMCGVRNDSCSRKQKYARTSHGMASESRLSRGVDLFFAQEFCFLKQEHAPPRGSKQAKTDVLLTMVLGSLRWAPRQTGYDTPLQKLVLF
Ga0209303_10284352	3300027262	Marine	MALLAVAMCGVRNDSCSRKDKYAKTSHGMASESLSRGVDLFFAQEFCFLNQEHGPPRGSKQAKTDVLLTMVVGSL
Ga0209186_100072116	3300027325	Marine	MDLLSGAMCGGRHDSCSRKHRYARTSHGMDFESPSRSVSSFFAQDFFFFKQEHGRPGGSEHKKADVLLTTNMGPVRCG
Ga0209186_10061094	3300027325	Marine	MCGGRHDSCSRKHKYARTSHGMGSESLSRGVDLFFAQEFCFFKQEHGPTSGSEQEKTDVILTTVLGPLRWVASFAAHPFSMV
Ga0209186_10139988	3300027325	Marine	VALLAGAMCGGRHDSCARKHKYARTSHEMGSESLSRGVDLFFAQEFCFFKQEHGPTSGSERAKTGVLLTTVLGPLR
Ga0209186_10222982	3300027325	Marine	MALLAGAMCGGRHDSCSRKHKYARTSHGMGSESLSRRVDLFFAQEFCFFKQEHGPPSGSEHAKTDVLLTTVLGPLRWLWYNRGRPVTKPCPV
Ga0209186_10714381	3300027325	Marine	MCGGRHDSCSRKHKYARTSHGMGSESLSRGVDLFFAQEFCFFKQEHGPTSGSEQAKTDVLLTTVLGPLRRGAGAVRAL
Ga0209185_10654872	3300027498	Marine	MALPAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFIKHEHGPPRGSKQAKTDALLTTVLDALRRDLTQGWKKSRVFTSRID
Ga0209185_11374611	3300027498	Marine	MCGVRNDSCSRKHKYARTSHGMASESMSRGVHLFFAQESCFFKQEHGPPTGSKQVKTDVLLTTVLGLLRWAEA
Ga0209185_11470021	3300027498	Marine	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGLDLFFAQEICFLKQEHGPPRGSKQAKSDVLLTTVLGSLRGGGDGEVGDGG
Ga0209185_11559671	3300027498	Marine	MCGVRNDSYSRKHKYARTSHAIASESLSREVNHVFAQDFCFLKQEHGPPRGSKQGQTDVLLTTVRG
Ga0209187_100380417	3300027509	Marine	MAMALLAGAMYGVRNDSCSRKHKYARTSHGMASEILSRGVDLFFAQEFCFFKQKHGPSRGSKQAKTDELLTTARKNPRTLN
Ga0209187_100551710	3300027509	Marine	VALLAGAMCGVRNDSCSRKHKYARTSHEMASESLSRGVDLFFPQEFCFFKQEHGPPRGSKQARTDVLLTTVLGPLRYPPPPP
Ga0209187_10059776	3300027509	Marine	MALLAGAMCGVRNDSCSRKHKYARTLHGMASESLSRGVDLFFAQEFCFLKQEHGPPRGSKQAKTDVLLTMVLGSLRWHPTTFLGWLLSGAHL
Ga0209187_10060195	3300027509	Marine	MDLLAGAICGVRNDSCSRKHKYVRTWHGMAFESLSRGVDLSFAQEFCVIKPEHGPAIGSKQVKTDVLLATVLGPLRGERRGSRGGSK
Ga0209187_100636513	3300027509	Marine	MCGVRNDSCSRKHKYARTSHGMASESLSRGVDLIFAQEFCFFKQEHGPSRGSKQAKTDVLLTTVLGPLRRQGDCHNPNSAV
Ga0209187_100676312	3300027509	Marine	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFIKQEHGPPRGSKQAKTDVLLTTV
Ga0209187_10068826	3300027509	Marine	MALLTGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVNLFFAQEFSFFKQKHGPPRGSKQTKTDVLLTTVLGALRGGTYSQVAVAGSAWGGE
Ga0209187_100761713	3300027509	Marine	MALLAGAVCGVRNDSCSRKHNYPRTSNGMVSESLSRGVHPFCAQEFCFFKQEQGPPRGSKQVKIDVLLTTVLGPLHPGGGSRLERR
Ga0209187_10088487	3300027509	Marine	MCGVRNDSCSRKHKYARTSHGMASESLSTEVNHVFAQDFCFLKQEHGPPRGSKQGQTDVLLTTVRGSQRCVKAGQD
Ga0209187_10096221	3300027509	Marine	MGLLAGPMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFIKQEHGPPRGSKQAKTDV
Ga0209187_10097256	3300027509	Marine	MALLAGAMCGVRIDSCSRKHKYARTSHWMASESLSMGVDLFFAQEFCFLKQEHGPPRGSKQAKTDVLLRTVLGPLR
Ga0209187_10137782	3300027509	Marine	MALLAGAMCGVRNDSCSRKHRYAWTSHGMASESLSRGVDLFFAQEFSFFGQEHGPPRGSKQAKTDVLLTTVLGPLRSDLARQETPECNQVSNVPI
Ga0209187_10148474	3300027509	Marine	VCTLRNDSCSHKRKLARTSHGMAFESLSRGVDLIFAQKMCFIKQEHGPPRDSKQAKKDVLLTTVLGPLRRHRRDGCLS
Ga0209187_10175172	3300027509	Marine	MALLAGPMCGVRNDSCSRKLKIARTSHGMASESLSRGVDLFFAQEFCFIEQEHGPPRGSKQAKTDVLLTTVMGPLRCRDSRAIFT
Ga0209187_10335774	3300027509	Marine	MALLAGAMCGVRNDSCSRKHKYARSSHGMASESLSRGVDLFFAQEFCFIKQEHGPPRGSKQAKTDVLLTTVLGPLRWPVDRRPCKNCT
Ga0209187_11105932	3300027509	Marine	MALLAVAMCGVRNDSCSRKDKYAKTSHGMASESLSRGVDLFFAQEFCFLNQEHGPPRGSKQAKTDVLLTMVLGSL
Ga0209187_11192232	3300027509	Marine	MALLAGRMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFIKQEHGPPRGSKQAKTDVLLTTVVGPLRS
Ga0209831_100111419	3300027554	Marine	MALLAGALCGVRNDSCSRRHKYARTSHGMASESLSRGFDLLFAQEFCFLKQEHGPPRGSKQAKTDVLLTTVLGSLRWCKCVIPYVL
Ga0209831_10015357	3300027554	Marine	MALLAGGMCGRRNDSCSREHKCARTSHGIASESVSRGVDLFLTQEFCFFKQEHGPPRGSKQAKTDVLLTTVAGPLRSGPADGSQRR
Ga0209831_10017521	3300027554	Marine	MCGVRNDSYSRKHKYARTSHAIASESLSREVNHVFAQDFCFLKQEHGPPRGSKQGQTDVLLTTVRGSQRCVKAGQD
Ga0209831_100383211	3300027554	Marine	MALLAGAMCGVRNDSCSRKHKYARTLHGMASESLSRGVDLFFSQEFCFFKQGHAPPRGSKQAKTDVLLTTVLGPLRRGES
Ga0209831_10070296	3300027554	Marine	MCGVRNDSCSRKHKYARTSHGMASESLSRGVHLFFAQELCFFKQEHGPPRGSKQAKTDVLLTTVLGPLRSPTAAKQKVAITKTGPARAL
Ga0209831_10116193	3300027554	Marine	MCGVRNHSCSRKHKYARTSHGMASESLSRGVDVLLAQEFCFLKQEHGPPRGSKQAKTDVLLTMVLGSLRSGAPA
Ga0209831_10163355	3300027554	Marine	MALLAGPMCGVRNDSCSRKLKFARTSHGMASESLSRGVDLFFAQEFCFIEQEHGPPRGSKQAKTEVLLTTVVGPLRCRDSRATFT
Ga0209831_10271403	3300027554	Marine	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESMSRGVDLIFAQEFCFFKQEHGPSRGSKQAKTDVLLTKVLGPLRRQGDCHNPNSAV
Ga0209831_10284651	3300027554	Marine	MALLAGAMCGVRNDSCSCKHKFARTSHGMASESLSRGVDLFFAQEFCFFKQEHGPPSGSKQAKTDVLLTTVLG
Ga0209831_10339313	3300027554	Marine	MALLAGAMCGVRNDSCSLKHNYARTSHGMASESLSRGVDLFFAQEICFFKQEHGPPRGSKQAKTDVLLTTVHA
Ga0209831_11735941	3300027554	Marine	MALLAGAMCGVMNGSCSRKHKDAMTSHGMASESLSRGVDLFFAQEFCFIKQEHGSPRGSKQAKTDVLLTTVLGPLRWGGGCFG
Ga0209828_10283353	3300027623	Marine	MALLAGGMCGVRNDSCSRKHKYAWTSHGMASECLSRGVDLFFAQEFCFIKQEHGPPRGSKQAKTDVLLTTVVG
Ga0209828_10328144	3300027623	Marine	MALLAGAMCGVRNDSCSRKHKYARTSHGMASESLSRGVDLFFAQEFCFFKQKHGPPRGSKQTKTDVLLTTVLGPLRG
Ga0209828_10370171	3300027623	Marine	MALLAGAMCGVRNDSCFGKHKYARTSHGMASESLSRGVDLFFAQEFCFFKQEHGPPRGSKEAKTDVLLATVLGPLRGGRQRQQQRRRWMEDG
Ga0209828_10605242	3300027623	Marine	MALLAGAMCGVRNDSCSRKRKYARTSHEMASESLSRGVDLFFAQEFCFFKQERGPPRGSKQAKTDVLLTTVLGPLRWAFP
Ga0209828_10798301	3300027623	Marine	MALLAGAMCGVRNDSCSREHKYARTSHGMASESLSRGVDLFFAQEFCFFKQEHGPPRGSKQAKSDVLLTTVLGPL
Ga0209828_12192911	3300027623	Marine	MALLPGAVCGVRHDSCFPKHRYVRTSHWMASDESLSKGVDLFFAREFCFFKQEHGLPTGSKQTNTDVLLTTVLGPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102431

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences