NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F102512

Metagenome / Metatranscriptome Family F102512

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F102512
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 73 residues
Representative Sequence MSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV
Number of Associated Samples 69
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 32.67 %
% of genes near scaffold ends (potentially truncated) 28.71 %
% of genes from short scaffolds (< 2000 bps) 83.17 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (90.099 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater
(32.673 % of family members)
Environment Ontology (ENVO) Unclassified
(62.376 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(92.079 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 90.54%    β-sheet: 0.00%    Coil/Unstructured: 9.46%
Feature Viewer
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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A90.10 %
All OrganismsrootAll Organisms9.90 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000736|JGI12547J11936_1018873Not Available1674Open in IMG/M
3300002835|B570J40625_100061766All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Branchiopoda → Phyllopoda → Diplostraca → Cladocera → Anomopoda → Daphniidae → Daphnia → Daphnia pulex5114Open in IMG/M
3300004688|Ga0065169_1009741Not Available538Open in IMG/M
3300004689|Ga0065172_1010843Not Available633Open in IMG/M
3300004690|Ga0065175_1012821Not Available640Open in IMG/M
3300004806|Ga0007854_10201225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes850Open in IMG/M
3300004806|Ga0007854_10393157Not Available565Open in IMG/M
3300005044|Ga0071351_1038586Not Available941Open in IMG/M
3300005044|Ga0071351_1053856Not Available748Open in IMG/M
3300005069|Ga0071350_1038588Not Available1304Open in IMG/M
3300005069|Ga0071350_1043271Not Available1247Open in IMG/M
3300005069|Ga0071350_1074644Not Available1009Open in IMG/M
3300005069|Ga0071350_1076482Not Available1000Open in IMG/M
3300005069|Ga0071350_1125894Not Available822Open in IMG/M
3300005565|Ga0068885_1883340Not Available883Open in IMG/M
3300006071|Ga0007876_1033192Not Available1423Open in IMG/M
3300006100|Ga0007806_1023212Not Available1288Open in IMG/M
3300006104|Ga0007882_10175431Not Available742Open in IMG/M
3300006104|Ga0007882_10277990Not Available544Open in IMG/M
3300006111|Ga0007848_1088186Not Available574Open in IMG/M
3300006118|Ga0007859_1010760All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Branchiopoda → Phyllopoda → Diplostraca → Cladocera → Anomopoda → Daphniidae → Daphnia → Daphnia pulex2098Open in IMG/M
3300006118|Ga0007859_1103905Not Available565Open in IMG/M
3300006127|Ga0007805_1114080Not Available580Open in IMG/M
3300008105|Ga0114338_1171164Not Available744Open in IMG/M
3300008105|Ga0114338_1267770Not Available547Open in IMG/M
3300008105|Ga0114338_1273998Not Available538Open in IMG/M
3300008106|Ga0114339_1029969Not Available3092Open in IMG/M
3300008106|Ga0114339_1078240Not Available1374Open in IMG/M
3300008106|Ga0114339_1080878Not Available1337Open in IMG/M
3300008109|Ga0114342_1023105Not Available2191Open in IMG/M
3300008109|Ga0114342_1049244Not Available1190Open in IMG/M
3300008109|Ga0114342_1064606Not Available987Open in IMG/M
3300008109|Ga0114342_1075905Not Available887Open in IMG/M
3300008109|Ga0114342_1115974Not Available677Open in IMG/M
3300008112|Ga0114345_1050840Not Available1231Open in IMG/M
3300008112|Ga0114345_1061731Not Available1139Open in IMG/M
3300008112|Ga0114345_1101796Not Available927Open in IMG/M
3300008112|Ga0114345_1136459Not Available815Open in IMG/M
3300008112|Ga0114345_1159188Not Available760Open in IMG/M
3300008112|Ga0114345_1174340Not Available727Open in IMG/M
3300008112|Ga0114345_1195220Not Available688Open in IMG/M
3300008112|Ga0114345_1320172Not Available514Open in IMG/M
3300008118|Ga0114352_1006398Not Available2733Open in IMG/M
3300008118|Ga0114352_1028514Not Available1160Open in IMG/M
3300008118|Ga0114352_1038105Not Available994Open in IMG/M
3300008118|Ga0114352_1064578Not Available755Open in IMG/M
3300008122|Ga0114359_1035237Not Available1899Open in IMG/M
3300008122|Ga0114359_1037987Not Available1808Open in IMG/M
3300008122|Ga0114359_1256567Not Available614Open in IMG/M
3300009068|Ga0114973_10472281Not Available651Open in IMG/M
3300009419|Ga0114982_1153380Not Available711Open in IMG/M
3300012686|Ga0157560_1088378Not Available1261Open in IMG/M
3300012694|Ga0157559_1030087Not Available618Open in IMG/M
3300012700|Ga0157576_1131740Not Available1414Open in IMG/M
3300012704|Ga0157574_1126091Not Available1770Open in IMG/M
3300012715|Ga0157599_1002726Not Available543Open in IMG/M
3300012724|Ga0157611_1140135Not Available1456Open in IMG/M
3300012749|Ga0157566_1122713Not Available632Open in IMG/M
3300012752|Ga0157629_1079376Not Available524Open in IMG/M
3300013004|Ga0164293_10784264Not Available605Open in IMG/M
3300013005|Ga0164292_10967671Not Available532Open in IMG/M
3300013093|Ga0164296_1373314Not Available529Open in IMG/M
3300013094|Ga0164297_10117713Not Available1099Open in IMG/M
3300013094|Ga0164297_10122695Not Available1068Open in IMG/M
3300013094|Ga0164297_10176516Not Available841Open in IMG/M
3300016688|Ga0180039_1030300Not Available895Open in IMG/M
3300020502|Ga0208087_1000534All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Branchiopoda → Phyllopoda → Diplostraca → Cladocera → Anomopoda → Daphniidae → Daphnia → Daphnia pulex6970Open in IMG/M
3300020504|Ga0208484_1000672All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Branchiopoda → Phyllopoda → Diplostraca → Cladocera → Anomopoda → Daphniidae → Daphnia → Daphnia pulex7641Open in IMG/M
3300020507|Ga0208697_1012543Not Available1087Open in IMG/M
3300020516|Ga0207935_1007707Not Available1757Open in IMG/M
3300020544|Ga0207937_1004451Not Available3558Open in IMG/M
3300020574|Ga0208221_1095059Not Available518Open in IMG/M
3300020677|Ga0214169_100386Not Available3782Open in IMG/M
3300020716|Ga0214207_1026127Not Available681Open in IMG/M
3300020727|Ga0214246_1021997Not Available1066Open in IMG/M
3300020728|Ga0214202_1002652Not Available4931Open in IMG/M
3300020729|Ga0214251_1019221Not Available1224Open in IMG/M
3300021112|Ga0214186_100771Not Available2771Open in IMG/M
3300021134|Ga0214171_1010825Not Available1502Open in IMG/M
3300021134|Ga0214171_1043650Not Available588Open in IMG/M
3300021138|Ga0214164_1071425Not Available701Open in IMG/M
3300024239|Ga0247724_1005080Not Available2057Open in IMG/M
3300025355|Ga0208254_1006350Not Available805Open in IMG/M
3300025369|Ga0208382_1005047All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Branchiopoda → Phyllopoda → Diplostraca → Cladocera → Anomopoda → Daphniidae → Daphnia → Daphnia pulex2579Open in IMG/M
3300025388|Ga0208503_1000597All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Branchiopoda → Phyllopoda → Diplostraca → Cladocera → Anomopoda → Daphniidae → Daphnia → Daphnia pulex6610Open in IMG/M
3300025396|Ga0208874_1016772Not Available1213Open in IMG/M
3300025401|Ga0207955_1068021Not Available545Open in IMG/M
3300025410|Ga0208875_1023186Not Available1049Open in IMG/M
3300025467|Ga0208260_1034687Not Available1073Open in IMG/M
3300025470|Ga0208389_1004228All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Branchiopoda → Phyllopoda → Diplostraca → Cladocera → Anomopoda → Daphniidae → Daphnia → Daphnia pulex4524Open in IMG/M
3300025487|Ga0208105_1033894Not Available948Open in IMG/M
3300025723|Ga0208741_10047991Not Available976Open in IMG/M
3300025723|Ga0208741_10085087Not Available715Open in IMG/M
3300025773|Ga0208104_1002291Not Available3111Open in IMG/M
3300025779|Ga0208869_1001036All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Branchiopoda → Phyllopoda → Diplostraca → Cladocera → Anomopoda → Daphniidae → Daphnia → Daphnia pulex5724Open in IMG/M
3300028025|Ga0247723_1036952Not Available1486Open in IMG/M
3300033980|Ga0334981_0224841Not Available862Open in IMG/M
3300033993|Ga0334994_0175056Not Available1183Open in IMG/M
3300034108|Ga0335050_0099092Not Available1689Open in IMG/M
3300034200|Ga0335065_0636444Not Available618Open in IMG/M
3300034279|Ga0335052_0089871All Organisms → Viruses → Predicted Viral1862Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater32.67%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton25.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater19.80%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater11.88%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater, Plankton1.98%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater1.98%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.98%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.99%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.99%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.99%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000736Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300004688Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07 (version 2)EnvironmentalOpen in IMG/M
3300004689Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE20Aug07 (version 2)EnvironmentalOpen in IMG/M
3300004690Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Jul07 (version 2)EnvironmentalOpen in IMG/M
3300004806Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08EnvironmentalOpen in IMG/M
3300005044Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0048EnvironmentalOpen in IMG/M
3300005069Metagenomes from Harmful Algal Blooms in Lake Erie, HABS-E2014-0024EnvironmentalOpen in IMG/M
3300005565Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006071Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09EnvironmentalOpen in IMG/M
3300006100Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09EnvironmentalOpen in IMG/M
3300006104Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1EnvironmentalOpen in IMG/M
3300006111Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul08EnvironmentalOpen in IMG/M
3300006118Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07EnvironmentalOpen in IMG/M
3300006127Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09EnvironmentalOpen in IMG/M
3300008105Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, sample E2014-0046-100-LTREnvironmentalOpen in IMG/M
3300008106Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-53-LTREnvironmentalOpen in IMG/M
3300008109Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-53-LTREnvironmentalOpen in IMG/M
3300008112Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-100-LTREnvironmentalOpen in IMG/M
3300008118Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-100-LTREnvironmentalOpen in IMG/M
3300008122Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample HABS-E2014-0124-100-LTREnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300012686Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES055 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012694Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES054 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012700Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES079 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012704Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES077 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012715Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES122 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012724Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES138 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012749Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES066 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012752Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES162 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013093Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaGEnvironmentalOpen in IMG/M
3300013094Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaGEnvironmentalOpen in IMG/M
3300016688Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES053 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020502Freshwater microbial communities from Lake Mendota, WI - 29OCT2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020504Freshwater microbial communities from Lake Mendota, WI - 09AUG2011 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020507Freshwater microbial communities from Lake Mendota, WI - 12SEP2008 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020516Freshwater microbial communities from Lake Mendota, WI - 30AUG2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020544Freshwater microbial communities from Lake Mendota, WI - 04SEP2011 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020574Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020677Freshwater microbial communities from Trout Bog Lake, WI - 13JUN2007 epilimnionEnvironmentalOpen in IMG/M
3300020716Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnionEnvironmentalOpen in IMG/M
3300020727Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnionEnvironmentalOpen in IMG/M
3300020728Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 epilimnionEnvironmentalOpen in IMG/M
3300020729Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 hypolimnionEnvironmentalOpen in IMG/M
3300021112Freshwater microbial communities from Trout Bog Lake, WI - 13JUN2008 epilimnionEnvironmentalOpen in IMG/M
3300021134Freshwater microbial communities from Trout Bog Lake, WI - 02JUL2007 epilimnionEnvironmentalOpen in IMG/M
3300021138Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnionEnvironmentalOpen in IMG/M
3300024239Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-EEnvironmentalOpen in IMG/M
3300025355Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Jul07 (SPAdes)EnvironmentalOpen in IMG/M
3300025369Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)EnvironmentalOpen in IMG/M
3300025388Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07 (SPAdes)EnvironmentalOpen in IMG/M
3300025396Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)EnvironmentalOpen in IMG/M
3300025401Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)EnvironmentalOpen in IMG/M
3300025410Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)EnvironmentalOpen in IMG/M
3300025467Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09 (SPAdes)EnvironmentalOpen in IMG/M
3300025470Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)EnvironmentalOpen in IMG/M
3300025487Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07 (SPAdes)EnvironmentalOpen in IMG/M
3300025723Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)EnvironmentalOpen in IMG/M
3300025773Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09 (SPAdes)EnvironmentalOpen in IMG/M
3300025779Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun08 (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300033980Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007EnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300034108Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157EnvironmentalOpen in IMG/M
3300034200Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190EnvironmentalOpen in IMG/M
3300034279Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12547J11936_101887313300000736Freshwater And SedimentEALVTYIRREMCDNIVMLCTEMRTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
B570J40625_10006176643300002835FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0065169_100974123300004688FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRLHNQIFGMMEEVKESFLQLV*
Ga0065172_101084323300004689FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRVHNQIFGMMEEVKESFLQLV*
Ga0065175_101282113300004690FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMRTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0007854_1020122513300004806FreshwaterMSVKNLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIRVHNQVFGMMEEVKESFLQLI*
Ga0007854_1039315723300004806FreshwaterIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRVHNQIFGMMEEVKESFLQLV*
Ga0071351_103858623300005044Freshwater, PlanktonMSVRKLIDEALVTYIRREMCDNIVMLCTEMRTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0071351_105385613300005044Freshwater, PlanktonMSVRKLIDKALVTYIRREMCDNIVMLCIEMKTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0071350_103858823300005069FreshwaterMSVKRLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLI*
Ga0071350_104327133300005069FreshwaterMSVKSLIDEALVTYTRREMCDSIVILCTEMKIFAETLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0071350_107464423300005069FreshwaterMSVKNLIDEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPVEKLQLLKTEIIKVHNQIFGMMEEVKESFLQLV*
Ga0071350_107648233300005069FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCMEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0071350_112589423300005069FreshwaterMSVKSLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIRVHNQVFGMMEEVKESFLQ
Ga0068885_188334033300005565Freshwater LakeMSVRKLIDEALVTYIRREMCDNIVMLCTEMRIFAEILEKFPVEKLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0007876_103319223300006071FreshwaterMSVKRLIDEALVTYTRREMCDSIVILCTEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLI*
Ga0007806_102321243300006100FreshwaterMSVKNLIDEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPVERLQLLKTEIIKVHNQIFGMMEEVKESFLQLV*
Ga0007882_1017543113300006104FreshwaterMSVRKLIDEALVSYIRREMCDNIVMLCTEMKTFAEILEKFPVEKLQLLKTEVIKVHNQVFGMMEEVKESFLQL
Ga0007882_1027799023300006104FreshwaterMSVKNLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLI*
Ga0007848_108818613300006111FreshwaterRGHYCERHFRRKTKKHSRRTSRVSRINMSVKSLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0007859_101076033300006118FreshwaterMSVRKLIDEALVTYIRREMCDNIIMLCTEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0007859_110390533300006118FreshwaterVTYIRREMCDGIVKLCIEMKTFAEILEKFPVERLQLLKTEVIKIHNQVFGMMEEVKESFLQLV*
Ga0007805_111408023300006127FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKGSFLQLV*
Ga0114338_117116413300008105Freshwater, PlanktonISRINMSVRKLIDEALVTYIRREMCDNIIMLCTEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114338_126777013300008105Freshwater, PlanktonVTYIRREMCDNIVMLCTEMRTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114338_127399813300008105Freshwater, PlanktonMSVRKLIDKALVTYIRREICDNIVMLCIEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEE
Ga0114339_102996923300008106Freshwater, PlanktonMSVRKLIDKALVTYIRREMCDNIVMLCIEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114339_107824023300008106Freshwater, PlanktonMSVKSLIEEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVERLQLLKTEIIRVHNQVFGMMEEVKESFLQLI*
Ga0114339_108087833300008106Freshwater, PlanktonMSVKSLIDEALVTYTRREMCDSIVILCTEMKIFAETLEKFPVEKLQLLKTEIIKVHNQVFGMMVEVKESFLQLV*
Ga0114342_102310523300008109Freshwater, PlanktonMSVKRLIDEALVTYTRREMCDSIVILCTEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0114342_104924413300008109Freshwater, PlanktonMSVKNLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0114342_106460643300008109Freshwater, PlanktonKLIDEALVTYIRREMCDNIVMLCTEMRTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114342_107590523300008109Freshwater, PlanktonMSVRSLIDEALVTYTRREMCDSIVILCTEMKIFAETLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0114342_111597413300008109Freshwater, PlanktonMSVRKLIDKALVTYIRREMCDNIVMLCIEMKTFAEILEKFPVERLQLLKTDVIKVHNQVFGMMEEVKESFLQLV*
Ga0114345_105084023300008112Freshwater, PlanktonMSVKSLIDEALVTYIRREMCDNIVMLCIEMKTFAENLEKFPVERLQLLKTEIIRVHNQVFGMMEEVKESFLQLV*
Ga0114345_106173133300008112Freshwater, PlanktonMSVRKLIDKALVTYIRREMCDNIVMLCIEMKTFAEILEKYPAERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114345_110179623300008112Freshwater, PlanktonMSVKNLIDEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPVERLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0114345_113645933300008112Freshwater, PlanktonMSVRRLIDEALVTYIRREMCDNIVILCTEMKTFAETLEKFPVEKLQLLKAEIIKVHNQVFGMMEEVKESFLQLV*
Ga0114345_115918823300008112Freshwater, PlanktonMSVRKLINKALVTYIRREMCDNIVTLCTEMRTFAEILEKFPVEKLQLLKAEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114345_117434013300008112Freshwater, PlanktonMSVRRLIDEALVTYIRREMCDGIVKLCIEMKTFGEILEKFPVERLQLLKTEIIKIHNQVFGMME
Ga0114345_119522013300008112Freshwater, PlanktonALVTYTRREMCDSIVVLCTEMKTFAETLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0114345_132017223300008112Freshwater, PlanktonMSVRKLIDKALVTYIRREMCDNIVMLCTEMRIFAEILEKFPVERIQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114352_100639873300008118Freshwater, PlanktonMSVRKLIDKALVTYIRREICDNIVMLCIEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114352_102851443300008118Freshwater, PlanktonMSVKRLIDEALATYIRREMCDNIVMLCTEMRTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114352_103810523300008118Freshwater, PlanktonMSVKNLIDEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0114352_106457823300008118Freshwater, PlanktonMSVRRLIDEALVTYTRREMCDSIVILCTEMKIFAETLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLI*
Ga0114359_103523743300008122Freshwater, PlanktonMSVRKLIDEALVTYIRREMCDNIVMLCIEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0114359_103798733300008122Freshwater, PlanktonMSVKNLIDEALVTYTRREMCDSIVVLCTEMKTFAETLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0114359_125656723300008122Freshwater, PlanktonMSVKRLIDEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPVEKLQLLKTEIIRVHNQIFGMMEEVKESFLQLV*
Ga0114973_1047228123300009068Freshwater LakeMSVKNLIDKALVTYVRREMCDNIVMLCTEMNTFAETLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0114982_115338023300009419Deep SubsurfaceMSVKNLIDEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPAERLQLLKTEIIKVHNQVFGMMEEVKESFLQLV*
Ga0157560_108837823300012686FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0157559_103008713300012694FreshwaterRISRISRINMSVKNLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIRVHNQVFGMMEEVKESFLQLV*
Ga0157576_113174033300012700FreshwaterMSVKNLIDEALVTYTRREMCDSIVILCTEMKIFAETLEKFPVEKLQLLKTEIIKVHNQIFGMMEEVKES
Ga0157574_112609133300012704FreshwaterMSVRKLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIRVHNQVFGMMEEVKESFLQLI*
Ga0157599_100272623300012715FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPIERLQLLKKEVIKVHNQVFGMMEEVKESFL
Ga0157611_114013523300012724FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCMEMKTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0157566_112271313300012749FreshwaterMSVKNLIVEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPVERLQLLKTEIIKVHNQIFGMMEEVKES
Ga0157629_107937623300012752FreshwaterMSVKRLIDEALVTYTRREMCDSIVILCTEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQ
Ga0164293_1078426423300013004FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMNTFAETLEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0164292_1096767123300013005FreshwaterMSVKRLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIRVHNQVFGMMEEVKESFLQLV*
Ga0164296_137331423300013093FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVEKLQLLKTEVIKVHNQVFGMMEEVKESFLQLV*
Ga0164297_1011771333300013094FreshwaterMSVKRLIDEALVTYIRREMCDGIVKLCIEMKTFAEILEKFPVERLQLLKTEVIKIHNQVFGMMEEVKESFLQLV*
Ga0164297_1012269523300013094FreshwaterMSVKNLIDEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPAERLQLLKTEIIKVHNQIFGMMEEVKESFLQLV*
Ga0164297_1017651623300013094FreshwaterMSVRRLIDEALVTYIRREMCDNIVILCTEMKTFAETLEKFPVEKLQLLKTEIIKVHNQIFGMMEEMKESFLQLV*
Ga0180039_103030023300016688FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRVHNQIFGMMEEMKESFLQLV
Ga0208087_100053433300020502FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV
Ga0208484_100067243300020504FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCMEMKTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV
Ga0208697_101254343300020507FreshwaterSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV
Ga0207935_100770743300020516FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILERFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLV
Ga0207937_1004451103300020544FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVERLQLLKTEVIKVHNQVFGMMEEVKESFLQLV
Ga0208221_109505913300020574FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCMEMKTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKES
Ga0214169_100386103300020677FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRVHNQIFGMMEEVKESFLQLV
Ga0214207_102612713300020716FreshwaterMSVRKLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMM
Ga0214246_102199733300020727FreshwaterMSVKNLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLLLLKTEIIRVHNQIFGMMEEVKESFLQLV
Ga0214202_100265233300020728FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRVHNQIFGMMEEVKESFLQFV
Ga0214251_101922123300020729FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRLHNQIFGMMEEVKESFLQLV
Ga0214186_10077133300021112FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRVHNQVFGMMEEVKESFLQLI
Ga0214171_101082513300021134FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRVHNQIFGMMEEVKESF
Ga0214171_104365033300021134FreshwaterRISRINMSVRSLINEALVTYTRREMCDSIVILCTEMKIFAETLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLI
Ga0214164_107142523300021138FreshwaterMSVKNLIDEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPVERLQLLKTEIIKVHNQIFGMMEEVKESFLQLV
Ga0247724_100508023300024239Deep Subsurface SedimentMSVKNLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIRVHNQVFGMMEEVKESFLQLI
Ga0208254_100635023300025355FreshwaterMSVRSLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLLLLKTEIIKVHNQVFGMMEEVKESFLQLI
Ga0208382_100504733300025369FreshwaterMSVRKLIDEALVTYVRREMCDNIVMLCTEMNIFAETLEKFPVERLQLLKIEIIKVHNQVFGMMEEVKESFLQLV
Ga0208503_100059793300025388FreshwaterMSVRKLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIRVHNQIFGMMEEVKESFLQLV
Ga0208874_101677213300025396FreshwaterLVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRVHNQIFGMMEEVKESFLQLV
Ga0207955_106802123300025401FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLI
Ga0208875_102318633300025410FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLQLLKTEIIRVHNQVFGMMEEVKES
Ga0208260_103468723300025467FreshwaterMSVKNLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLI
Ga0208389_100422823300025470FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV
Ga0208105_103389433300025487FreshwaterMSVKRLIDEALVTYIRREMCDGIVKLCIEMKTFAEILEKFPVERLQLLKTEVIKIHNQVFGMMEEVKESFLQLV
Ga0208741_1004799113300025723FreshwaterLVTYVRREMCDNIVMLCTEMNTFAETLEKFPVERLQLLKTEIIKVHNQIFGMMEEVKESFLQLV
Ga0208741_1008508723300025723FreshwaterMSVKKNLIDEALVTYTRREMCDSIVILCIEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLI
Ga0208104_100229113300025773FreshwaterLVTYIRREMCDGIVKLCIEMKTFAEILEKFPVERLQLLKTEVIKIHNQVFGMMEEVKESFLQLV
Ga0208869_100103633300025779FreshwaterMSVKRLIDEALVTYIRREMCDGIVKLCIEMKTFAEILEKFPVERLQLLKTEIIKVHNQIFGMMEEVKESFLQLV
Ga0247723_103695223300028025Deep Subsurface SedimentMSVKRLIDEALVTYTRREMCDSIVILCTEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV
Ga0334981_0224841_245_4693300033980FreshwaterMSVKRLIDEALVTYTRREMCDSIVILCTEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLI
Ga0334994_0175056_974_11833300033993FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESF
Ga0335050_0099092_1289_15133300034108FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCIEMKTFAENLEKFPVEKLQLLKTEIIKVHNQVFGMMEEVKESFLQLV
Ga0335065_0636444_400_6183300034200FreshwaterVKNLIDEALVTYVRREMCDNIVMLCTEMNTFAETLEKFPVERLQLLKTEIIKVHNQVFGMMEEVKESFLQLV
Ga0335052_0089871_1484_17083300034279FreshwaterMSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAEILEKFPVERLQLLRTEVIKVHNQVFGMMEEVKESFLQLI

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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