Metagenome Family F102542

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Overview

Basic Information
Family ID	F102542
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	38 residues
Representative Sequence	HPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT
Number of Associated Samples	14
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	11
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont (95.049 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.44% β-sheet: 0.00% Coil/Unstructured: 51.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Annelida	Host-Associated → Annelida	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Annelida → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Digestive Tube	Host-Associated → Annelida → Digestive System → Digestive Tube	95.05%
Unclassified	Host-Associated → Annelida → Digestive System → Unclassified	4.95%

Habitat	Taxonomy	Distribution
Extracellular Symbionts	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts	95.05%
Unclassified	Host-Associated → Annelida → Digestive System → Unclassified → Unclassified	4.95%

Habitat	Taxonomy	Distribution
Marine Gutless Worms Symbiont	Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont	95.05%
Marine Gutless Worms	Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms	3.96%
Marine Gutless Worms Symbiont	Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003772	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus exumae BAHAMAS.2	Host-Associated	Open in IMG/M
3300005652	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1	Host-Associated	Open in IMG/M
3300005653	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1	Host-Associated	Open in IMG/M
3300005970	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2	Host-Associated	Open in IMG/M
3300005999	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.2	Host-Associated	Open in IMG/M
3300007818	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2	Host-Associated	Open in IMG/M
3300008215	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.1	Host-Associated	Open in IMG/M
3300010290	Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-54 metaG	Host-Associated	Open in IMG/M
3300010292	Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-67 metaG	Host-Associated	Open in IMG/M
3300010295	Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 2 OAHU.JWI-49 metaG	Host-Associated	Open in IMG/M
3300010315	Marine gutless worms symbiont microbial communities from Oahu, Hawaii - Inanidrilus sp. 1 OAHU.JWI-70 metaG	Host-Associated	Open in IMG/M
3300027001	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.2 (SPAdes)	Host-Associated	Open in IMG/M
3300027658	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1 (SPAdes)	Host-Associated	Open in IMG/M
3300027661	Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0049094_100060481	3300003772	Marine Gutless Worms Symbiont	LKLNDYPSPSYSVVSADTLRDLVTLTFDLLTLDSGQTWQVTSTKF
Ga0056135_101187582	3300005652	Marine Gutless Worms Symbiont	MVSYSVLAADMFRDFVTLTFDLLTLVSGHTCRVTL*
Ga0056135_101575974	3300005652	Marine Gutless Worms Symbiont	YDHPLPRYSVIAADTLRDLVTLTFDLLTLLSGHTWRVTW*
Ga0056135_101965033	3300005652	Marine Gutless Worms Symbiont	DHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTWSTGV*
Ga0056135_102761452	3300005652	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRDLVTLTFDLLTFFSGHTWRVT*
Ga0056135_104507803	3300005652	Marine Gutless Worms Symbiont	MPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTWSTPAP
Ga0056135_104622821	3300005652	Marine Gutless Worms Symbiont	LPSYIVIAADTLRDIVTLTFDLLTLVSGHTWRVTWSTPPPSL
Ga0056135_104943422	3300005652	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRDLVTLTFDLLTLVSDHTWLVR*
Ga0056135_105059251	3300005652	Marine Gutless Worms Symbiont	LKLIDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHT*
Ga0056135_105095391	3300005652	Marine Gutless Worms Symbiont	LPRYTVIAADTLRDLVTLTFDLLTLVSGHTWRVTW
Ga0056135_105537492	3300005652	Marine Gutless Worms Symbiont	DHPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWRVK*
Ga0056133_100861411	3300005653	Marine Gutless Worms Symbiont	MPRYSVIAADTLRDLVTLTFDLLTLVSGYTRRVT*
Ga0056133_101856581	3300005653	Marine Gutless Worms Symbiont	DHPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWQVT*
Ga0056133_102805171	3300005653	Marine Gutless Worms Symbiont	LPRYSVIAADTLRDLVILTFDLLTLVSGHTWRVTWST
Ga0056133_103573012	3300005653	Marine Gutless Worms Symbiont	MTVSTKLKLIDHPLPRYSVIAADTLRDLVTLTFDLLTLVS
Ga0056133_104078972	3300005653	Marine Gutless Worms Symbiont	YDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056133_104509842	3300005653	Marine Gutless Worms Symbiont	PLPRYSVIAADTLRDLVTLTFDLLTLVSGRTWRVM*
Ga0056133_104605411	3300005653	Marine Gutless Worms Symbiont	PRYSVIAADTLRDLVTLTFDLLTLVSGHTCRVTC*
Ga0056133_105186232	3300005653	Marine Gutless Worms Symbiont	DHPLPRNSVIAADTLRDLVTLTFDLLTLVSGHTWRIM*
Ga0056133_105244161	3300005653	Marine Gutless Worms Symbiont	YDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGRTWRVT*
Ga0056133_105440702	3300005653	Marine Gutless Worms Symbiont	DYPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056133_105605361	3300005653	Marine Gutless Worms Symbiont	LPRYSVIAADTLRDLVTLTFDLLTLVSGHTRRVT*
Ga0056133_105714972	3300005653	Marine Gutless Worms Symbiont	YDHPMPRYSVIAADTLRDIATLTFDLLTLVICHTWRVTL*
Ga0056133_105800192	3300005653	Marine Gutless Worms Symbiont	YDYPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWRVK*
Ga0056133_105849101	3300005653	Marine Gutless Worms Symbiont	MPRYSVIAADTLRDIVTLTFDLLTLVSGHTWRVTW
Ga0056133_105935361	3300005653	Marine Gutless Worms Symbiont	YDHPMPRYSVIAADTLRELVTLTFDLLTLVSGHTWRVT*
Ga0056134_100179271	3300005970	Marine Gutless Worms Symbiont	LPSYSLIAADTLRDLVTLTFDLLTLVSGHTWRVTWST
Ga0056134_101796482	3300005970	Marine Gutless Worms Symbiont	YDHPMPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTVRVD*
Ga0056134_101832891	3300005970	Marine Gutless Worms Symbiont	LPSYSVIAADTLRDLVTLTFDLLTLFSGHTWLVT*
Ga0056134_102211402	3300005970	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRDLVTLTYDLLTLVSGHTWRVT*
Ga0056134_102345201	3300005970	Marine Gutless Worms Symbiont	DHPLPRYSVIAADTLRDLVTLTFDLLTLVSDHTWRVTW*
Ga0056134_103439542	3300005970	Marine Gutless Worms Symbiont	LTSYSVIAADTLRELVILTFDLLTLVIGHTWRVTWS
Ga0056134_103704651	3300005970	Marine Gutless Worms Symbiont	LPSYNVIAADTLRDLVTLTFDLLTLVSGHTRRVTWS
Ga0056134_103796071	3300005970	Marine Gutless Worms Symbiont	PLPRYSVIAADTLRDLVTLTSHLLTLVSGHTWRVMWSTPHEV*
Ga0056134_103929411	3300005970	Marine Gutless Worms Symbiont	DHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTCRVT*
Ga0056134_103936791	3300005970	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRDLVTLTFDLLTLFSGRTWRVT*
Ga0056134_104342571	3300005970	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRYLVTLTFDLLTLVSGYTWRIT*
Ga0056134_104488041	3300005970	Marine Gutless Worms Symbiont	LKLIDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGRTWRVT*
Ga0056134_104604731	3300005970	Marine Gutless Worms Symbiont	MPRYSVIAADTLRDLVTFDLLTLVSGHTWRVTWSTPPPSL
Ga0056134_104701221	3300005970	Marine Gutless Worms Symbiont	LPRYSVIAADTLRDLVTLTFDLLTLVSGHTGGSRDQP
Ga0056134_104761961	3300005970	Marine Gutless Worms Symbiont	SYGHPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWR*
Ga0056134_104945792	3300005970	Marine Gutless Worms Symbiont	MPRYSVIATDTLRDLVTLTFDLLTLVSGHTWRVTW
Ga0056136_10206031	3300005999	Marine Gutless Worms Symbiont	DHPLPRYCVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056136_10273221	3300005999	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWQVT*
Ga0056136_10437152	3300005999	Marine Gutless Worms Symbiont	PLPSYSVIAADTLRDLVTLTFDLLTLVSGPTWRVT*
Ga0056136_10543322	3300005999	Marine Gutless Worms Symbiont	MPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTCSTPPP
Ga0056109_10167921	3300007818	Marine Gutless Worms Symbiont	YDHPLPSYSVIAADTLRDLVTLSFDLLTLVSDHTWRVT*
Ga0056109_11366462	3300007818	Marine Gutless Worms Symbiont	DHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056108_10368672	3300008215	Marine Gutless Worms Symbiont	DHPLPRYSVIAADTLRDLVTLTFDLLTLVNGHTWQVTWSSQLQQLK*
Ga0056108_11696611	3300008215	Marine Gutless Worms Symbiont	HPLPSYSFIAADTLRDLVTLTFDLLTLFSGHTWRVT*
Ga0056108_12506191	3300008215	Marine Gutless Worms Symbiont	DHPLPSYSVIAGDTLRDLVTLSFDILTLVSGHTWRAT*
Ga0056108_12915481	3300008215	Marine Gutless Worms Symbiont	PLPSYSVIAADTLRDLVTLTFNLLTLVSGNTAIRS*
Ga0056108_14123931	3300008215	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRDLATLTFDLLTLVSGRTWRVM*
Ga0056108_14231741	3300008215	Marine Gutless Worms Symbiont	LPRYSVIAADTLRDLVTLTFDLLTLFSGHTWRVT*
Ga0056108_14379861	3300008215	Marine Gutless Worms Symbiont	MPRYSVIAADTLRDIVTLTFDLLTLVSGHTWRVT*
Ga0056108_14383751	3300008215	Marine Gutless Worms Symbiont	PLPRYSVIAADTLRDLVTLTFDLLTLVSGHTCRVTW*
Ga0056108_14531321	3300008215	Marine Gutless Worms Symbiont	PLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWQVT*
Ga0056108_14639322	3300008215	Marine Gutless Worms Symbiont	MPRYSVIAADTLRDLVTLTFHLLTLVSGHTWRVTWSTPP
Ga0056108_14998541	3300008215	Marine Gutless Worms Symbiont	DHPLPRYSVIATDTLRDLVTLTFDLLTLVSGRTWRVT*
Ga0056108_15002872	3300008215	Marine Gutless Worms Symbiont	YDHPLPSYTVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056108_15051611	3300008215	Marine Gutless Worms Symbiont	DHLMPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTWSTPHEV*
Ga0056108_15307922	3300008215	Marine Gutless Worms Symbiont	YDHPLPRYSVIAADTLRDLVTLTFHLLTLVSGHTWRVT*
Ga0056108_15327802	3300008215	Marine Gutless Worms Symbiont	MPRYSIIAADTLRDLVTLTFDLLTLVSGHTWRVTWSTPQ
Ga0056108_15365671	3300008215	Marine Gutless Worms Symbiont	HLLPSYSVIAADTLRDLVTLTFDLLTLVSAHTWRVM*
Ga0056108_15377681	3300008215	Marine Gutless Worms Symbiont	HPLPSNSVIAADTLRDLVTSTFDLLTLVSGHTWRVT*
Ga0056108_15423972	3300008215	Marine Gutless Worms Symbiont	HPLPRYSVIAADKLRDLVTLTFDLLTLVSGHTWRVR*
Ga0056108_15492541	3300008215	Marine Gutless Worms Symbiont	PLPNYSVIAVDRLRDLVTLTFDLLTLVSGHTWRVTGQSLHQV*
Ga0056108_15568201	3300008215	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT*
Ga0056108_15599291	3300008215	Marine Gutless Worms Symbiont	LPRYSVIAADTLGDLVTLTFDLLTLVSGHTWRVT*
Ga0056108_15612621	3300008215	Marine Gutless Worms Symbiont	MPRYSVIAADTFRDLVTLTFDLLTLVSGHTWRVTWSTPPPSLK
Ga0126333_12277881	3300010290	Marine Gutless Worms	MIIHCRVNVLSDDTLRDLVTLTFDLLTLNSCHTWR
Ga0126326_13065951	3300010292	Marine Gutless Worms	PLPSYSVLAADTLRDLVTLTFDLLTLSSCPAWRVT*
Ga0126334_102713391	3300010295	Marine Gutless Worms	LSSYSVLAADTLRDLVTLTFDLLTLKSCHTRRVT*
Ga0136654_13487341	3300010315	Marine Gutless Worms	GHPLPSYSVLAADTLRDLVTLTFDLLTLSSCPAWRVT*
Ga0209790_10258421	3300027001	Marine Gutless Worms Symbiont	PLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT
Ga0209259_11100623	3300027658	Marine Gutless Worms Symbiont	PMPRYSVMADDTLRDLVTLTFDLLTLVSGRTWRVT
Ga0209259_11168801	3300027658	Marine Gutless Worms Symbiont	DHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT
Ga0209259_11575821	3300027658	Marine Gutless Worms Symbiont	MPRYSVIAADTLRDLVTFDLLTLVSGHTWRVTWSTRPPSLKV
Ga0209259_11914811	3300027658	Marine Gutless Worms Symbiont	YDHPLPRYSVIAADTLRDLVTLTFDLLTLLTDHTWRVT
Ga0209259_12191191	3300027658	Marine Gutless Worms Symbiont	YDHPLPPYSVIAADTLRDLVTLTFDLLTLVSGHTWRVT
Ga0209259_12357781	3300027658	Marine Gutless Worms Symbiont	YSVIAADTLRDLVTLTFDLLTLVSGHTWRVTRIAVGEF
Ga0209259_12472241	3300027658	Marine Gutless Worms Symbiont	DYPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTTFECPT
Ga0209259_12515592	3300027658	Marine Gutless Worms Symbiont	DHLLPSYSVLAADTLRDLLTSTFDLLTLVSGHTWRVT
Ga0209259_12601851	3300027658	Marine Gutless Worms Symbiont	HPLPSYSVIAADTLRDLVTLTFDLLTLVSGHTWRVVVNTSTKF
Ga0209259_13449941	3300027658	Marine Gutless Worms Symbiont	LPSYSVIAADTLRDLVTLTFDLLTLDNGHTLEDPT
Ga0209259_13480231	3300027658	Marine Gutless Worms Symbiont	HPLPSYSVIAADTLLDLVTLTFDLLTLVSGHACLVT
Ga0209259_13715212	3300027658	Marine Gutless Worms Symbiont	YDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRIT
Ga0209259_14022412	3300027658	Marine Gutless Worms Symbiont	YDHPLPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRVK
Ga0209259_14166031	3300027658	Marine Gutless Worms Symbiont	DNRLPRSSVIDADTLRDLVTLTFDLWTLVSGHTWRVT
Ga0209259_14402351	3300027658	Marine Gutless Worms Symbiont	PKPRYSVIAADTLRDLVTLTFDLLTLVSGYTWRVT
Ga0209259_14440261	3300027658	Marine Gutless Worms Symbiont	PMPRYSVIAADTLRDIVTLTFDLLNLVSGHTWRVM
Ga0209459_100032111	3300027661	Marine Gutless Worms Symbiont	PSYSVIADDTLRDLVTLTFDLLTLVSGHTWRVTWSIPLHQV
Ga0209459_100711341	3300027661	Marine Gutless Worms Symbiont	LPSYSVIAADTLRDLVTLTFDLLTLVSGHTWRVTRIAVGEF
Ga0209459_101129153	3300027661	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRDLVTLTFDLLTLVSGRTWGSRD
Ga0209459_102075041	3300027661	Marine Gutless Worms Symbiont	MHSYSVIAADTLRDIVTLTFDLLTLVSGRTWRVTW
Ga0209459_102661251	3300027661	Marine Gutless Worms Symbiont	YDHPLRSYRVIAAGTSRDLVTLTFNLLTLVSGHTPYHVTYA
Ga0209459_103318651	3300027661	Marine Gutless Worms Symbiont	YDHPMPRYSVIAADTLRDLVTLTFDLLTLFSGRTWRVT
Ga0209459_103392912	3300027661	Marine Gutless Worms Symbiont	HPLPRYSVIAADTLRDLVTLTFDLLTLVSDHTWLVR
Ga0209459_103393291	3300027661	Marine Gutless Worms Symbiont	LPRYSVIAADTLRDLVTLTFDLLTLVSGHTWRGTWSTPPPS
Ga0209459_104187741	3300027661	Marine Gutless Worms Symbiont	YSVIAADTLRDLVTLTFDLLTLVSGHTWRVTWQPLH
Ga0209459_104332652	3300027661	Marine Gutless Worms Symbiont	PLPRYSVIAADTLRDLVILTFDLLTLVSGRTWRVT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102542

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences