Metagenome / Metatranscriptome Family F102544

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102544
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	122 residues
Representative Sequence	MRKLMLVLALVVVMVPLLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKDDKIIARGGHNLILANKYGNDTDIIRAGRGSFDKINVRDGDPRDRIRAGAGAHDWCIVDANSELAAGCERVN
Number of Associated Samples	39
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.42 %
% of genes near scaffold ends (potentially truncated)	39.60 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	38
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.356 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (54.455 % of family members)
Environment Ontology (ENVO)	Unclassified (57.426 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.327 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.03% β-sheet: 18.95% Coil/Unstructured: 66.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00150	Cellulase	1.98
PF00144	Beta-lactamase	1.98
PF00877	NLPC_P60	1.98
PF13586	DDE_Tnp_1_2	0.99
PF01548	DEDD_Tnp_IS110	0.99
PF00464	SHMT	0.99
PF08240	ADH_N	0.99
PF00582	Usp	0.99
PF00196	GerE	0.99
PF13563	2_5_RNA_ligase2	0.99
PF01494	FAD_binding_3	0.99
PF01544	CorA	0.99
PF06736	TMEM175	0.99
PF14023	DUF4239	0.99
PF00089	Trypsin	0.99
PF07366	SnoaL	0.99
PF01510	Amidase_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.98
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	1.98
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.98
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.98
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.98
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	1.98
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	1.98
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.99
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.99
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.99
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.99
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.99
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.99
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.99
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
All Organisms	root	All Organisms	35.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
cellular organisms	root	All Organisms → cellular organisms	35.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.65 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.73 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.73 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	21.78 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	21.78 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	21.78 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	11.88 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	1.98 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.99 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	11.88 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1.98 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.99 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000095\|LCrCPGB2aDRAFT_c091066	Not Available	516	Open in IMG/M
3300002568\|C688J35102_118112222	Not Available	530	Open in IMG/M
3300002568\|C688J35102_119599267	Not Available	728	Open in IMG/M
3300004081\|Ga0063454_100073557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1497	Open in IMG/M
3300004463\|Ga0063356_100675452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1414	Open in IMG/M
3300004463\|Ga0063356_101536371	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005562\|Ga0058697_10224928	Not Available	862	Open in IMG/M
3300007790\|Ga0105679_10299179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1478	Open in IMG/M
3300009094\|Ga0111539_12333607	Not Available	621	Open in IMG/M
3300009789\|Ga0126307_10126912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2035	Open in IMG/M
3300009789\|Ga0126307_10156277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1827	Open in IMG/M
3300009789\|Ga0126307_10328619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1231	Open in IMG/M
3300009789\|Ga0126307_10467473	Not Available	1018	Open in IMG/M
3300009840\|Ga0126313_10035190	All Organisms → cellular organisms → Bacteria	3461	Open in IMG/M
3300009840\|Ga0126313_10099384	Not Available	2137	Open in IMG/M
3300009840\|Ga0126313_10297031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1262	Open in IMG/M
3300009840\|Ga0126313_10383537	Not Available	1113	Open in IMG/M
3300009840\|Ga0126313_10537820	Not Available	938	Open in IMG/M
3300010036\|Ga0126305_10436993	Not Available	867	Open in IMG/M
3300010036\|Ga0126305_11016255	Not Available	569	Open in IMG/M
3300010036\|Ga0126305_11075835	Not Available	553	Open in IMG/M
3300010036\|Ga0126305_11270427	Not Available	508	Open in IMG/M
3300010037\|Ga0126304_10089614	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300010037\|Ga0126304_10668623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	701	Open in IMG/M
3300010037\|Ga0126304_10785635	Not Available	645	Open in IMG/M
3300010038\|Ga0126315_10629942	Not Available	695	Open in IMG/M
3300010038\|Ga0126315_10815468	Not Available	616	Open in IMG/M
3300010039\|Ga0126309_10043817	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300010039\|Ga0126309_10044811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2087	Open in IMG/M
3300010039\|Ga0126309_10079339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1645	Open in IMG/M
3300010039\|Ga0126309_10135414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1308	Open in IMG/M
3300010039\|Ga0126309_10349396	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010039\|Ga0126309_10384915	Not Available	835	Open in IMG/M
3300010039\|Ga0126309_10447639	Not Available	784	Open in IMG/M
3300010039\|Ga0126309_10763741	Not Available	627	Open in IMG/M
3300010039\|Ga0126309_10786903	Not Available	620	Open in IMG/M
3300010040\|Ga0126308_10397402	Not Available	919	Open in IMG/M
3300010040\|Ga0126308_10400321	Not Available	916	Open in IMG/M
3300010040\|Ga0126308_10760975	Not Available	669	Open in IMG/M
3300010040\|Ga0126308_10991397	Not Available	588	Open in IMG/M
3300010040\|Ga0126308_11159910	Not Available	546	Open in IMG/M
3300010041\|Ga0126312_10080913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2201	Open in IMG/M
3300010041\|Ga0126312_10104177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1942	Open in IMG/M
3300010041\|Ga0126312_10134927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1707	Open in IMG/M
3300010041\|Ga0126312_10590558	Not Available	798	Open in IMG/M
3300010041\|Ga0126312_10977421	Not Available	619	Open in IMG/M
3300010042\|Ga0126314_10528399	Not Available	857	Open in IMG/M
3300010042\|Ga0126314_10669826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	759	Open in IMG/M
3300010042\|Ga0126314_10746845	Not Available	718	Open in IMG/M
3300010042\|Ga0126314_10812862	Not Available	688	Open in IMG/M
3300010044\|Ga0126310_10004857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5775	Open in IMG/M
3300010044\|Ga0126310_10010778	All Organisms → cellular organisms → Bacteria	4245	Open in IMG/M
3300010044\|Ga0126310_10274337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1149	Open in IMG/M
3300010044\|Ga0126310_10294318	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	1115	Open in IMG/M
3300010044\|Ga0126310_10402802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	975	Open in IMG/M
3300010044\|Ga0126310_10604036	Not Available	818	Open in IMG/M
3300010044\|Ga0126310_11237414	Not Available	601	Open in IMG/M
3300010044\|Ga0126310_11736560	Not Available	519	Open in IMG/M
3300010045\|Ga0126311_10107565	Not Available	1926	Open in IMG/M
3300010045\|Ga0126311_10204359	Not Available	1443	Open in IMG/M
3300010045\|Ga0126311_10252599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1309	Open in IMG/M
3300010045\|Ga0126311_10375646	Not Available	1089	Open in IMG/M
3300010045\|Ga0126311_10552425	Not Available	907	Open in IMG/M
3300010145\|Ga0126321_1284594	Not Available	517	Open in IMG/M
3300010166\|Ga0126306_10639340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	850	Open in IMG/M
3300010395\|Ga0058701_10750942	Not Available	534	Open in IMG/M
3300011332\|Ga0126317_10415820	Not Available	520	Open in IMG/M
3300012212\|Ga0150985_108739622	Not Available	891	Open in IMG/M
3300012469\|Ga0150984_101699233	Not Available	739	Open in IMG/M
3300014487\|Ga0182000_10120620	Not Available	909	Open in IMG/M
3300014488\|Ga0182001_10284310	Not Available	660	Open in IMG/M
3300017965\|Ga0190266_11075503	Not Available	546	Open in IMG/M
3300017965\|Ga0190266_11155654	Not Available	532	Open in IMG/M
3300018432\|Ga0190275_10006757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8331	Open in IMG/M
3300018432\|Ga0190275_10017558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5476	Open in IMG/M
3300018432\|Ga0190275_10028679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	4433	Open in IMG/M
3300018432\|Ga0190275_12065735	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300018432\|Ga0190275_12574481	Not Available	586	Open in IMG/M
3300018432\|Ga0190275_13493960	Not Available	509	Open in IMG/M
3300018465\|Ga0190269_11438976	Not Available	562	Open in IMG/M
3300018466\|Ga0190268_10047792	Not Available	1673	Open in IMG/M
3300018466\|Ga0190268_10152118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1184	Open in IMG/M
3300018920\|Ga0190273_10229361	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300018920\|Ga0190273_10466384	Not Available	912	Open in IMG/M
3300018933\|Ga0193614_1085856	Not Available	880	Open in IMG/M
3300018939\|Ga0193593_1170951	Not Available	517	Open in IMG/M
3300019767\|Ga0190267_10176923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	969	Open in IMG/M
3300019767\|Ga0190267_10352451	Not Available	794	Open in IMG/M
3300019767\|Ga0190267_10615418	Not Available	676	Open in IMG/M
3300019767\|Ga0190267_10833913	Not Available	619	Open in IMG/M
3300028705\|Ga0307276_10022896	Not Available	1240	Open in IMG/M
3300028705\|Ga0307276_10085710	Not Available	746	Open in IMG/M
3300028705\|Ga0307276_10181490	Not Available	547	Open in IMG/M
3300028705\|Ga0307276_10215059	Not Available	509	Open in IMG/M
3300028771\|Ga0307320_10311379	Not Available	626	Open in IMG/M
3300031091\|Ga0308201_10041249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1110	Open in IMG/M
3300031091\|Ga0308201_10318314	Not Available	560	Open in IMG/M
3300031091\|Ga0308201_10319075	Not Available	559	Open in IMG/M
3300031092\|Ga0308204_10189078	Not Available	635	Open in IMG/M
3300031995\|Ga0307409_102142071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	589	Open in IMG/M
3300031995\|Ga0307409_102657387	Not Available	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.09%
Host-Associated	Host-Associated	8.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.11%
Plants	Host-Associated → Plants	8.91%
Aquatic	Environmental → Aquatic	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.97%
Freshwater	Environmental → Aquatic → Freshwater	1.98%
Phylloplane	Host-Associated → Plants → Phylloplane	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.18%
Sand	Environmental → Terrestrial → Soil → Sand	3.96%
Loam	Environmental → Terrestrial → Soil → Loam	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.98%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	82.18%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	3.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	54.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.97%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.98%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.98%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LCrCPGB2aDRAFT_0910661	3300000095	Soil	MPKKTMMVVALVVVMVPLLAAAAVAHDQLIQCRAIPCYGTGNDDKILERIGNGKSDKIIPGGGHDLINAHKYGRDIDVVKSSKGWDKIKVNDNDLNDTANAGKGKHDWCIVDARSEVGRGCNKVSVR*
C688J35102_1181122221	3300002568	Soil	MPRKPMMVLALVVVMMVPSFGAAALAAGQIIQCRSLPCHGSGQADKILERIGDGKSDKIIARGGRDLIVANNYDQEIDTIRGGLGSDKINVADGDISDKADGGAGGHDWCIVDVRSELGR
C688J35102_1195992671	3300002568	Soil	MRKLMMVVALVVVMVPLVGAAALAANQIIQCESLPCFGSGNDDLIYERTGNGKDDKIYARGGHDRILANKYSNDHDIVKGGPGGFDKINVRDGDPKDRIRAGTGAHDWCIVDANSELAGGCERIN*
Ga0063454_1000735572	3300004081	Soil	MPRKLMMALVVVMMVPLVGAAALAAGQIIQCQSLPCHGSGQADKILERIGDGKSDKIIARGGRDLILANNYDQEIDTIRGGLGSDKINVADGDISDTAGGGAGGHDWCIVD
Ga0063356_1006754524	3300004463	Arabidopsis Thaliana Rhizosphere	AALAADQIIQCGTIPCFGSGNDDKILERIGNGKDDKILARGGHDLILANKYTNDHDIVRGGPGGFDKINVRDGDPRDRIRASAGAHDWCIVDANSELAGGCERIN*
Ga0063356_1015363711	3300004463	Arabidopsis Thaliana Rhizosphere	MPRKLMMVVALVVVMVPSFGAAALAAGQIIQCRSVTCYGSGQDDKILERIGNGKDDKIIARGGHDLILARKYDQEIDVIRGGLGSDKINVADGDISDTAGGGAGRQDWCIVDVRSELGSGCERVSIR*
Ga0058697_102249281	3300005562	Agave	MPRKLMIVVALVVVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGSDLILANKYGQEIDVIRGGLGSDQINVADGDISDTAGGGAGGHDWCIVDVRSELGRGCERVTIR*
Ga0105679_102991791	3300007790	Soil	MEEVSMRKLTMVIALVVVMVPLVGAVAFAADQLIQCKSVPCYGSGNDDKILERIGNGKTDKIYPKGGHDLINAHKYGNDIDVVISSKGWDKIKVNDNDRLDHAGGGKGAHDWCIVDARKEAGTGCNKVTVR*
Ga0111539_123336071	3300009094	Populus Rhizosphere	MRKLMLVLALVVVMVPLLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKDDKILARGGHDLILANKYTNDKDIIWAGRGGFDNINVRDGDPRDRIRAGAGAHDWCIVDANSELAGGCE
Ga0126307_101269123	3300009789	Serpentine Soil	VMVPLLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKDDKIYAKGGHDLILANKYTNDKDIIRAGRGSFDKINVRDGDPRDRIRAGAGAHDWCITDANSELAGGCERIN*
Ga0126307_101562772	3300009789	Serpentine Soil	MMGVALVVVMVPLVGAAALAADQIIQCKSIPCYGSSNDDKILERIGNGKSDKIIVRGGHDLILANKYGNDIDVVKGGRGWDKINVRDGDPNDTAGGGKGGHDWCIVDANSELTGSCERIN
Ga0126307_103286191	3300009789	Serpentine Soil	MPRKLMMVVALVVVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGSDLILADKYDQEIDVIRGGLGSDQINVADGDISDTAGGGAGRQDWCIVDVRSELGRGCERVTIR*
Ga0126307_104674732	3300009789	Serpentine Soil	MRKLMMVVALVAVMVPLGSVAAFAADQIIQCKSIPCYGSGNDDLILERIGNGKSDKIIPRGGHDLIRASKYGNDIDVAKGSPGGYDKIRVDDGDFADLAGGGRGGHDWCIVDARGELGSGCEKVTVR*
Ga0126313_100351901	3300009840	Serpentine Soil	MLVLALVVVMVPLLGAAALAADQLIQCKSIPCYGSGNDDKILERIGNGKDDKIYAKGGHDLILANKYTNDQDIIRAGSGSFDKINVRDGDPRDRIRAGAGAHDWCIVDANSELAGGCERVN*
Ga0126313_100993842	3300009840	Serpentine Soil	MPRKLMMVVALVVVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGRDLILANKYDQEIDVIRGGLGSDQINVADGDISDTAGGGAGRQDWCIVDVRSELGRGCERVTIR*
Ga0126313_102970312	3300009840	Serpentine Soil	MREERCMRKLMMAFALVVVLVPLVGAAALAADQLIQCKSIPCYGSGNDDKILERIGNGKSDKIIVRGGHDVILANKYTNDIDVVKGGRGWDKINVRDGDPNDTAGGGKGGHDWCIVDANSELTGGCEKLN*
Ga0126313_103835371	3300009840	Serpentine Soil	MMVLALVVVMVPLLGAAALAADQIIQCRSIPCYGSGNDDLILERIGNGKSDKIIPRGGHDLVRANKYHNDIDVVKGSPGGYDKLRVDDGDISDTASGGRGGHDWCIVDSRSEVGKGCEKVTVR*
Ga0126313_105378201	3300009840	Serpentine Soil	MRKSMMVVALVVVMVPLLGAAALAADQLIQCKSIPCYGSGNDDLILERIGNGKSDKIIPRGGHDLVRASKYGNDIDVVKGSPGGYDKLRVDDGDTNDTAGGGRGGHDWCIVDARSELGSGCEKVTVR*
Ga0126305_104369932	3300010036	Serpentine Soil	LRKLMMGVALVVVMVPLVGAAALAADQLIQCKSIPCYGSSNDDKILERIGNGKSDKIIVRGGHDVILANKYGNDIDVVKGGRGWDKINVRDGDPNDTAGGGKGGHDWCIVDANSEL
Ga0126305_110162551	3300010036	Serpentine Soil	KLMLVLALVVVMVPLLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKDDKIYAKGGHDLILANKYGNDQDIIKAGRGSFDKINVRDGDPRDRIRAGAGAHDWCITDANSELAGGCERIN*
Ga0126305_110758351	3300010036	Serpentine Soil	MRKSMMVVALVVVMVPLLGAAALAADQLIQCKSIPCYGSGNDDLILERIGNGKSDKIIPRGGHDLVRASKYGNDIDVVKGSPGGYDKLRVDDGDTNDTAGGGRGGHDWCIVDARSELGSGCEKV
Ga0126305_112704271	3300010036	Serpentine Soil	KLMLVLALVVVMVPLLGAAALAADQLIQCRSIPCYGSGNDDLILERIGNGKSDKIIPRGGHDLIRASKYGNDIDVAKGSPGGYDKIRVDDGDFADLAGGGRGGHDWCIVDARGELGSGCEKVTVR*
Ga0126304_100896142	3300010037	Serpentine Soil	MMGVALVVVMVPLVGAAALAADQIIQCKSIPCYGSSNDDKILERIGNGKSDKIIVRGGHDVILANKYGNDIDVVKGGRGWDKINVRDGDPNDTAGGGKGGHDWCIVDANSELTGSCERIN
Ga0126304_106686232	3300010037	Serpentine Soil	VVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGSDLILADKYDQEIDVIRGGLGSDQINVADGDISDTAGGGAGRHDWCIVDVRSELGRGCERVTIR*
Ga0126304_107856351	3300010037	Serpentine Soil	RPKDGRGEVDMRKLMMVVALVVVMVPLVGVAAFAADQLIQCKAIPCYGSGNDDLILERIGNGKTDKILPGGGHDLIRANKYTNDIDVVTSSAGWDKINVKDGDTNDTANGGKGGHDWCIVDARSEAGKGCEKVTF*
Ga0126315_106299421	3300010038	Serpentine Soil	MRKLMMVLSLVVVLVPLAAAAALAATDQLIQCKSIPCYGAGNDDKILERIGNGKDDKIYAKGGHDLILANKYTNDQDIIRAGRGSFDKINVRDGDPNDRIRAGAGAHDWCIVDANSELAGGCERIN*
Ga0126315_108154681	3300010038	Serpentine Soil	MPRKLMIVVALVVVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDRIIARGGSDLILANKYDQEIDVIRGGLGSDKINVADGDISYTAGGGAGRQDWCIVDVRSELGRGCERVTIR*
Ga0126309_100438172	3300010039	Serpentine Soil	VRKLTMVIALVVVMLPLVGAAALAADQLILCKIKPCYGAGNDDKIFERIGNGKNDKILPRGGHDLILANKYTRDVDVVKGGKGGDKIKVNDGDIRDEAAGGKGRHDWCIVDSRSEVGRGCNKVSVR*
Ga0126309_100448113	3300010039	Serpentine Soil	MRKLTLIVALVVMTIPVLAGVAFAADQLIQCRSIPCYGSGNDDKILERIGNGKDDKIYARGGHDLILANKYTNDTDIIRGGRGGFDKINVADGDRRDRIRGGAGARDWCIVDSRSEAGSGCERVTVR*
Ga0126309_100793392	3300010039	Serpentine Soil	MRKLTMVLAVVVVMVPLVGAAALAADQLIQCQSIPCYGSGNDDKILERIGNGKADKILPGGGHDLIKANGYTNDIDVVKSSKGFDKINVRDGDTNDTANGGRGGHDWCIVDSRSEAGRGCEKVTR*
Ga0126309_101354142	3300010039	Serpentine Soil	MRKSAMVLLVVVMLVPLVAAAAFAADQLIQCKAIPCYGTSNDDLILERIGNGKSDKILPKGGHDLIRANKYGNDIDVVKSSKGWDKIKVNDNDRLDHAGGGKGAHDWCIVDARREAGSGCDKVSVR*
Ga0126309_103493961	3300010039	Serpentine Soil	EPKTASRGLRVGAGRANVLCIVDTRGEERCMRKLAMVFALVVVLVPLLGAAALAADRIIQCRSIPCYGSGNDDKILERIGRGVPDKIIARGGHDLILANKYGNDHDIVRSGGGLDKINVRDGDPNDRIRAGKGAQDWCIVDANSELAGGCERIN*
Ga0126309_103849151	3300010039	Serpentine Soil	MRKLTMIVALVVVMVPLVAAAAFAADQLIQCQSIPCYGSGNDDKILERKGNGKSDKILPGGGHDLIKANAYTNDIDVVKSSKGWDKINVRDGDTNDKANGGKGAHDWCIVDSRSEAGRGCDKVTR*
Ga0126309_104476392	3300010039	Serpentine Soil	MRKSMMVVALVVVLVPLVAAAAFAADQLIQCQSIPCYGSGNDDKILERKGNGKPDKILPGGGHDLILANKYTNDIDVVKSSKGWDKIKVNDGDTNDTASGGRGAHDWCIV
Ga0126309_107637411	3300010039	Serpentine Soil	VPLVGAAALAADQIILCKIKPCYGTGNNDKIYERIGNGKNDKILPKGGHDLILANRYNQDIDVVKGGKGGDKIKVNDGDISDTAAGGKGRHDWCIVDSRSEVGRGCNKVSVR*
Ga0126309_107869031	3300010039	Serpentine Soil	MLVLALVVVMVPLLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKSDKILPAGGHDLVLANKYGHDIDVAKGSAGGYDKINVNDGDTFDTAAGGGGGHDYCIVDSRSELG
Ga0126308_103974021	3300010040	Serpentine Soil	MRKLMMVVALVVVMVPLVGVAAFAADQLIQCKAIPCYGSGNDDLILERIGNGKSDKILPSGGHDLIRANKYTNDIDVVTSSKGWDKINVKDGDSNDTASGGRGAHDWCIVDDRSEVGRGCNKVTGF*
Ga0126308_104003211	3300010040	Serpentine Soil	MPRKLMIVVALVVVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGSDLILADKYDQEIDVIRGGLGSDQINVADGDISDTAGGGAGRHDWCIVDVRSELGRGCERVTIR*
Ga0126308_107609751	3300010040	Serpentine Soil	MLVLALVVVMVPLLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKNDKIIARGGHDVINASKYGNDTDIVRSGKGLDKINVRDGDPRDRIRAGAGAHDWCIVDANSELAGGCERIN
Ga0126308_109913971	3300010040	Serpentine Soil	MMGVALVVVMVPLVGAAALAADQIIQCKSIPCYGSSNDDKILERIGNGKSDKIIVRGGHDLILANKYGNDIDVVKGGRGWDKINVRDGDPNDTAGGGKGGHDWCIVDANSELTGSCE
Ga0126308_111599101	3300010040	Serpentine Soil	PRSRPEYGKVEVSMRKLTMVLAVVVVMVPLVGAAALAADQLIQCQSIPCYGSGNDDKILERKGNGKSDKILPGGGHDLIKANGYTNDIDVVKSSKGFDKINVRDGDTNDTANGGRGGHDWCIVDSRSEAGRGCEKVTR*
Ga0126312_100809133	3300010041	Serpentine Soil	MMVVALVVVMVPLVAAAAFAADQLIQCQSIPCYGSGNDDKILERKGNGKPDKILPGGGHDLILANGYTNDIDVVKSSKGWDKIKVNDGDTNDTASGGRGAHDWCIVDSRSEAGRGCDKVTVR*
Ga0126312_101041772	3300010041	Serpentine Soil	MLVLALVVVMVPLLGAAALAADQLIQCKSIPCYGSGNDDKILERIGNGKDDKIYAKGGHDLILANKYTNDKDIIRAGRGSFDKINVRDGDPRDRIRAGAGAHDWCIVDANSELAGGCERVN*
Ga0126312_101349272	3300010041	Serpentine Soil	MPRKLMMVVALVVVMVPSFGAAALASGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGRDLILANKYDQEIDVIRGGLGSDQINVADGDISDTAGGGAGRHDWCIVDVRSELGRGCERVTIR*
Ga0126312_105905581	3300010041	Serpentine Soil	MMGVALVVVMVPLVGAAALAADQLIQCKSIPCYGSGNDDKILERIGNGKSDKIIVRGGHDVILANKYTNDIDVVKGGRGWDKINVRDGDPNDTAGGGKGGHDWCIVDANSELTGSCERIN
Ga0126312_109774211	3300010041	Serpentine Soil	PLVGAAALAADQLIQCQSIPCYGSGNDDKILERIGNGKADKILPGGGHDLIKANGYTNDIDVVKSSKGWDKINVRDGDTNDTANGGRGGHDWCIVDSRSEAGRGCEKVTR*
Ga0126314_105283992	3300010042	Serpentine Soil	MARKLMIVVALMVVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGSDLILADKYDQEIDVIRGGLGSDQINVADGDISDTAGGGAGRHDWCIVDVRSELGRGCERVTIR*
Ga0126314_106698262	3300010042	Serpentine Soil	MLVLALVVVMVPLLGAAALAADQLIQCKSIPCYGSGNDDKILERIGNGKDDKIYAKGGHDLILANKYTNDQDIIRAGSGSFDKINVRDGDPRDRIRAGAGAH
Ga0126314_107468451	3300010042	Serpentine Soil	MRKLMMVVALVVVMVPLLGAAALAADQIIQCRSIPCYGSGNDDLILERIGNGKSDKIIPRGGHDLVRASKYGNDIDVVKGSPGGYDKLRVDDGDVNDTAGGGRGGHDWCIVDARSELGKGCDKVTVR*
Ga0126314_108128621	3300010042	Serpentine Soil	QLIQCRSIPCYGSGNDDKILVRIGNGKDDKIYAKGGHDLILANKYGNDKDIIRAGRGSFDKINVRDGDPRDRIRAGAGAHDWCITDANSELAGGCERIN*
Ga0126310_100048571	3300010044	Serpentine Soil	MRKLMMVLALVVVMVPVLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKNDKIIARRGHDLIKANGYTNDTDIVRSGRGMDKINVRDGDPHDRIRAGKGAHDWCIVDANSELAGGCERIN*
Ga0126310_100107781	3300010044	Serpentine Soil	MRKLMMAFALVVVMVPLVGAAALAADQLILCKIKPCYGAGNDDKIFERIGNGKNDKILPRGGHDLILANKYTRDVDVVKGGKGGDKIKVNDGDIRDEAAGGKGRHDWCIVDSRSEVGRGCNKVSVR*
Ga0126310_102743371	3300010044	Serpentine Soil	MRKLTMVVALVVVMVPLLGAAAFAADQLIQCRAIPCYGSGNDDLILERIGNGKADKIIPRGGHDLVRANKYHNDIDVVKGSKGGFDKLRVDDGDLNDTAGGGGGGHDWCIVDARSELGSGCDKVTVR*
Ga0126310_102943182	3300010044	Serpentine Soil	VVVMVPLVGAAAFAADQLIQCNTLPCYGSGNNDKILERIGNGKADKILPGGGHDLILANKYTRDIDVVKSSKGWDKIKVNDNDRLDKANGGKGKHDWCIVDVRSEAGRGCNKVSVR*
Ga0126310_104028022	3300010044	Serpentine Soil	MLVLALVVVMVPLLGAAALAADQLIQCKSIPCYGSGNDDKILERIGNGKDDKIYAKGGHDLILANKYTNDQDIIRAGSGSFDKINVRDGDPRDRIRAGAGAHDWCIVDANSELA
Ga0126310_106040362	3300010044	Serpentine Soil	MRKLMLVLGLVVVMVPLVGAAALAADQIIQCRSIPCYGSGNDDLIYERMGNGKDDKIYARGGHDRILANKYTNDHDIIKGGKGGFDKINVRDGDPKDRIRAGKGAHDWCIVDANSELSGACERIN*
Ga0126310_112374141	3300010044	Serpentine Soil	LVVVMVPLIGAAAFAADQLIQCQSIPCYGSSNDDKILERIGNGKADKILPGGGHDLIKANNYTNDIDVVKSSKGWDKINVRDGDTNDKANGGRGGHDWCIVDVRSEAGRGCEKVTR*
Ga0126310_117365601	3300010044	Serpentine Soil	MRKLTMVLSLVVVMVPLVGAAAFAADQLIQCQSIPCYGSGNDDKILERIGNGKNDKIIPRGGHDLILANKYNQDIDVVKGSGGGFDKIKVNDGDISDKAAGGRGGHDWC
Ga0126311_101075652	3300010045	Serpentine Soil	MLVLALVVVMVPLLGAAALAADQLIQCKSIPCYGSGNDDKILERIGNGKDDKIYAKGGHDLILANKYTNDHDIIRAGRGSFDKINVRDGDPRDRIRAGAGAHDWCIVDANSELAGGCERVN*
Ga0126311_102043592	3300010045	Serpentine Soil	MVVAVVVVMVPLVGAAALAADQLILCKIKPCYGAGNDDKIFERIGNGKNDKILPRGGHDLILANKYTRDVDVVKGGKGGDKIKVNDGDIRDEAAGGKGRHDWCIVDSRSEVGRGCNKVSVR*
Ga0126311_102525992	3300010045	Serpentine Soil	MRKLMMVVALVAVMVPLVGAAAFATDQLIQCKSIPCYGTGNDDLILERIGNGKADKIIPKGGHDLVRASKYGRDIDVAKGSKGGFDKLRVDDGDLNDTAGGGRGGHDWCIVDARSELGSGCDKVTVR*
Ga0126311_103756461	3300010045	Serpentine Soil	MRKLMLVLGLVVVMVPLVGAAALAADQIIQCRSIPCYGSGNDDLIYERMGNGKDDKIYARGGHDRILANKYTNDHDIIKGGKGGFDKINVRDGDPKDRIRAGKGAHDWCIVDANSELAAGCERIN*
Ga0126311_105524252	3300010045	Serpentine Soil	MPRKLMMVVALVVVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGRDLILANKYDQEIDVIRGGLGSDQINVADGDISDTAGGGAGRHDWCIVDVRSELGRGCERVTIR*
Ga0126321_12845941	3300010145	Soil	VVLDHVPGMREERCMPRKLMMVVALVVVMVPSFGAAALAAGQLIQCKSIPCDGSGQDDKILERIGIGKNDRIIARGGHDLILANKYDQEIDVIRGGLGSDKINVADGDISDTAGGGAGRDDWCIVDVRSELGRGCEKVTVR*
Ga0126306_106393402	3300010166	Serpentine Soil	MRKLMMAFALVVVMVPLVGAAALAADQLIQCKSIPCYGSSNDDKILERIGNGKSDKIIVRGGHDVILANKYGNDIDVVKGGRGWDKINVRDGDPNDTAGGGKGGHDWCIVDANSELTGGCEKLN*
Ga0058701_107509421	3300010395	Agave	VGAAALAANQIIQCESLPCFGSGNDDLIYERKGNGKDDKIYARGGHDRILANKYTNDHDIIKGGKGSFDKINVRDGDPKDRIRAGKGAHDWCIVDANSELSAACERIN*
Ga0126317_104158201	3300011332	Soil	MLVLALVVVMVPLLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKADKILARGGHDLILANKYGNDQDIIKAGRGSFDKINVRDGDPRDRIRAGAGAHDWCIVDANSELAGGCERIN*
Ga0150985_1087396222	3300012212	Avena Fatua Rhizosphere	ALVVVMVPLVGAAALAANQIIQCESLPCFGSGNDDLIYERTGNGKDDKIYARGGHDRILANKYSNDHDIVKGGPGGFDKINVRDGDPKDRIRAGTGAHDWCIVDANSELAGGCERIN*
Ga0150984_1016992332	3300012469	Avena Fatua Rhizosphere	GRRLKMRKLIIVLSLVVAMVSLVGAVALAANHIIQCESLPCFGSGNDDLIYERTGNGKDDKIYARGGHDRILANKYTNDHDIVKGGPGGFDKINVRDGDPKDRIRAGTGAHDWCIVDANSELAGGCERIN*
Ga0182000_101206202	3300014487	Soil	MRKLMMVVALVVVMVPLIGAAALAADQLIQCKSIPCYGSGNDDLILERIGNGKADKIIPRGGHDLVRASKYGRDIDVAKGSPGGFDKLRVDDGDTNDKAGGGRGGHDWCIVDARSELGSGCEKVTVR*
Ga0182001_102843102	3300014488	Soil	KGEVEMRKLMMVLALLVVMVPMIGAAALAADQIIQCKGIPCFGSGNDDLIYERKGNGKDDKIYARGGHDRILANKYTNDHDIIKGGKGSFDKINVRDGDPKDRIRAGKGAHDWCIVDANSELSAACERIN*
Ga0190266_110755031	3300017965	Soil	MPRKLMIVVALVVVMVPSFGAAALAAGQIIQCQSVPYYGFGQDDKILERIGNGKSDKIIARGGSDLILANKYDQEIDVIRGGLGSDQINAADGDISDTAGGGAGRHDWCIVDVRSELGRGCERVTIR
Ga0190266_111556541	3300017965	Soil	MPRKLMMVVALVVVMVPSFGAAALAAGQLIQCKSIPCDGSGQDDKILERIGNGKNDKIYAKGGHDLILANKYTNDQDIIRAGSGSFDKINVRDGDPRDRIRAGAGAHDW
Ga0190275_100067574	3300018432	Soil	VRKLLLVVALVAVMVPLVGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKDDKIYARGGHDLILANKYGNDKDIIRAGRGSFDKINVRDGDPLDRIRAGAGAHDWCITDANSELAAGCERVN
Ga0190275_100175585	3300018432	Soil	MRKLMLVLALVVVMVPVVGAAAFAADQLIQCRSIPCYGSGNDDKILERIGNGKDDKIFARGGHDLILANKYTNDHDIIRAGRGSFDKINVRDGDPRDRIRAGAGAHDWCIVDANSELAGGCERIN
Ga0190275_100286795	3300018432	Soil	MLVLALVVVMVPLIGAAALAADQLVQCRSIPCYGSGNDDKILERIGNGKDDKIYAKGGHDLILANKYTNDKDIIRAGRGSFDKINVRDGDPRDRIRAGAGARDWCIVDANSELAAGCERV
Ga0190275_120657351	3300018432	Soil	MRKLMLVLALVVVMVPLLGAAALAADQVIQCKSIPCYGSGNDDLILERIGNGKADKIIPRGGHDLIRASKYTNDIDVVKGSGGGFDKLRVDDGDISDTAGGGRGGHDWCLVDSRSELGKGCEKVTVR
Ga0190275_125744811	3300018432	Soil	MRKLMMVVALVAVMVPLGAVAAFAHDQLIQCRAIPCYGSGSDDLILERIGNGKADKIIPRGGHDLVRASKYGRDIDVAKGSKGGFDKLRVDDGDTNDTAGGGRGGHDWCIVD
Ga0190275_134939601	3300018432	Soil	MRKLMLVLGLVVVMVPLLGAAALAANQIIQCKSIPCYGAGNDDKILERIGRGVPDKIIARGGHDLILANKYGNDHDIVRSGRGRDKINVRDGDPNDRIRAGTGAHDWCIVDANSELAGGCERVN
Ga0190269_114389761	3300018465	Soil	MRKLMLVLALVVVMVPLLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKDDKIIARGGHNLILANKYGNDTDIIRAGRGSFDKINVRDGDPRDRIRAGAGAHDWCIVDANSELAAGCERVN
Ga0190268_100477922	3300018466	Soil	MRKLMLVLGLVVVMVPLLGAAALAANQIIQCKSIPCYGAGNDDKILERIGRGVPDKIIARGGHDLILANKYGNDHDIVRSGRGRDKINVRDGDPNDRIRAGTGAH
Ga0190268_101521182	3300018466	Soil	MPRKLMIVVALMVVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGSDLILANKYDQEIDVIRGGLGSDQINVADGDISDTAGGGAGRQDWCIVDVRSELGRGCERVTIR
Ga0190273_102293611	3300018920	Soil	MPRKLMIVVALVVVMVPSFGAAALAAGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGGDLILARRYNQEIDVIRGGLGSDKINVADGDISDTAGGGAGRHDWCIVDVRSELGRGCERVTIR
Ga0190273_104663841	3300018920	Soil	MRKLMLVLGLVVVMVPLLGAAALAANQIIQCKGIPCYGAGNDDKIIERIGRGVPDKILARGGHDLILANKYGNDHDIVRSGLGRDKINVRDGDPNDRIRAGTGAHDWCIVDANSELAGGCERVN
Ga0193614_10858561	3300018933	Soil	MPKKTMMVVALVVVMVPLLAAAAVAHDQLIQCRAIPCYGTGNDDKILERIGNGKSDKIIPGGGHDLINAHKYGRDIDVVKSSKGWDKIKVNDNDLNDTANAGKGKHDWCIVDARSEVGRGCNKVSVR
Ga0193593_11709511	3300018939	Soil	QEASEKKEDRALMPKKTMMVVALVVVMVPLLAAAAVAHDQLIQCRAIPCYGTGNDDKILERIGNGKSDKIIPGVGHDLINAHKYGRDIDVVKSSKGWDKIKVNDNDLNDTANAGKGKHDWCIVDARSEVGRGCNKVSVR
Ga0190267_101769231	3300019767	Soil	SFGAAALAAGQLIQCKSIPCDGSGQDDKILERIGIGKNDRIIARGGHDLILANKYDQEIDVIRGGLGSDKINVADGDISDTAGGGAGRHDWCIVDVRSELGRGCEKVTVR
Ga0190267_103524511	3300019767	Soil	MRKLMLVLGLVVVMVPLVGAAALAADQIIQCKSIPCFGSGNDDLIYERIGNGKDDKIYARGGHDRILANKYTNDHDIIKGGKGGFDKINVRDGDPKDRIRAGKGAHDWCIV
Ga0190267_106154181	3300019767	Soil	GAAALAADQIIQCKSIPCYGSGNDDLILERIGNGKADKIIPRGGHDLVRASKYGRDIDVAKGSKGGFDKLRVDDGDVNDTAGGGRGGHDWCIVDARSELGSGCDKVTVR
Ga0190267_108339131	3300019767	Soil	MRKLMMVLALVVVMVPVLGAAALAADQLIQCRSIPCYGAGNDDKILERIGNGKDDKIIARGGHDLILANKYTNDHDIVRSGLGRDKINVRDGDPHDRIRAGQGAHDWCIVDANSELAGGCERIN
Ga0307276_100228961	3300028705	Soil	MRKLMLVLGLVVVMVPLVGAAALAADQIIQCKSIPCYGSGNDDLIYERIGNGKDDKIYARGGHDRILANKYTNDHDIIKGGKGGFDKINVRDGDPKDRIRAGAGAHDWCIVDANSELGGGCERIN
Ga0307276_100857101	3300028705	Soil	MRKLMLVLGLVVVMVPLLGAAALAANQIIQCKSIPCYGSGNDDKILERIGRGVPDKIIARGGHDLILANKYGNDHDIVRSGGGLDKINVRDGDPNDRIRAGKGAQDWCIVDANSELAGGCERIN
Ga0307276_101814901	3300028705	Soil	MRKLMMVAALVVVIVPVLGAAALAADQIIQCKSIPCYGSGNDDQILERIGNRKTDKIIARGGHDLIKANKYHNDTDIVRAGRGLDKINVRDGDPYDRIHAGKGAH
Ga0307276_102150591	3300028705	Soil	RGEVNMRKLMMVIALVVVMVPLVGAAALAADQLILCKIKPCFGTGNDDKIFERIGNGKNDKILPKGGHDLVLANKYNQDIDVVKGGKGGDKIKVNDGDISDTADGGKGRHDWCIVDSRSEVGRGCNKVSVR
Ga0307320_103113791	3300028771	Soil	MRKLMLVLGLVVVMVPLLGAAALAANQIIQCKSIPCYGAGNDDKILERIGRGVPDKIIARGGHDLILANKYGNDHDIVRSGRGRDKINVRDGDPNDRIRAGTGAHDWCIVDANSELAGGCERIN
Ga0308201_100412491	3300031091	Soil	MRKLMMVVALVVLMVPLVGAAALAADQIIQCKAIPCYGSGNDDLILERIGNGKADKIIPRGGHDLIRASKYTRDIDVLKGSGGGFDKLRVDDGDTNDTAGGGKGGHDWCLVDARSELGSGCEKVTVR
Ga0308201_103183142	3300031091	Soil	MPRKLMIVVALVVVMVPSFGAAALASGQIIQCQSVPCYGFGQDDKILERIGNGKSDKIIARGGSDLILANKYDQEIDVIRGGLGSDQINVADGDISDTAGGGAGRHDW
Ga0308201_103190751	3300031091	Soil	MRKLMLVLALVVVMVPLLGAAALAADQLIQCRSIPCYGSGNDDKILERIGNGKDDKIFAKGGHDLILANKYTNDQDIIRAGSGSFDKINVRDGDPRDRIRAGAGAHDWCIVDANSELAGGCERIN
Ga0308204_101890781	3300031092	Soil	MVLTLVVVLVPLVGAAALAAGQIIQCKSVPCNGAGDNNKILERIGNGKQDLILPRGGNDLILATKYNQDIDVVRGGKGWDKIKVNDGDISDTAGGGRGRNDWCFVDSRSEVGMGCDKVTI
Ga0307409_1021420711	3300031995	Rhizosphere	MRKLMMAFALVVVLVPLVGAAALAADQLIQCKSIPCYGSGNDDKILERIGNGKSDKIIVRGGHDVILANKYGNDIDVVKGGRGWDKINVRDGDPNDTAGGGKGGHDWCIVDANSELTGGCEKLN
Ga0307409_1026573871	3300031995	Rhizosphere	MMRKLMMVLALVVVMVPVVGAAALAADQIIQCRSIPCYGSGNDDLILERIGNGKSDKILPSGGYDLIRASKYGNDIDVVTSSAGWDKIRVDDGDTLDTANGGRGGHDWCIVDARSEAGRGCDKVTPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102544

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences