Metagenome Family F102685

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102685
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	101 residues
Representative Sequence	MLATTGVPRRVLGLRDFLEAGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGSAVENGNLLVVEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE
Number of Associated Samples	58
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.00 %
% of genes near scaffold ends (potentially truncated)	46.53 %
% of genes from short scaffolds (< 2000 bps)	99.01 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (93.069 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (81.188 % of family members)
Environment Ontology (ENVO)	Unclassified (81.188 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (81.188 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.55% β-sheet: 0.00% Coil/Unstructured: 95.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF04195	Transposase_28	2.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
All Organisms	root	All Organisms	6.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
cellular organisms	root	All Organisms → cellular organisms	6.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	5.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	5.94 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	5.94 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	5.94 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	5.94 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	5.94 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	4.95 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	0.99 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	4.95 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	0.99 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Saccharinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae	4.95 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	0.99 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Miscanthus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus	4.95 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	0.99 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Miscanthus lutarioriparius	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	4.95 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	0.99 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.07 %
Miscanthus lutarioriparius	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	4.95 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	0.99 %
uncultured Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005334\|Ga0068869_100365390	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1179	Open in IMG/M
3300005338\|Ga0068868_100461379	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	1106	Open in IMG/M
3300005338\|Ga0068868_100572800	Not Available	997	Open in IMG/M
3300005364\|Ga0070673_101235541	Not Available	701	Open in IMG/M
3300005459\|Ga0068867_100296473	Not Available	1331	Open in IMG/M
3300005459\|Ga0068867_100884769	Not Available	802	Open in IMG/M
3300005459\|Ga0068867_101653400	Not Available	599	Open in IMG/M
3300005614\|Ga0068856_101646418	Not Available	655	Open in IMG/M
3300005718\|Ga0068866_10876588	Not Available	629	Open in IMG/M
3300006881\|Ga0068865_101148820	Not Available	686	Open in IMG/M
3300009148\|Ga0105243_12024372	Not Available	610	Open in IMG/M
3300013296\|Ga0157374_12734586	Not Available	521	Open in IMG/M
3300013297\|Ga0157378_10778640	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → environmental samples → uncultured Phycisphaerae bacterium	981	Open in IMG/M
3300013297\|Ga0157378_11696573	Not Available	679	Open in IMG/M
3300014969\|Ga0157376_11284115	Not Available	762	Open in IMG/M
3300014969\|Ga0157376_11978917	Not Available	620	Open in IMG/M
3300015267\|Ga0182122_1034327	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	620	Open in IMG/M
3300015274\|Ga0182188_1018927	Not Available	685	Open in IMG/M
3300015275\|Ga0182172_1058177	Not Available	547	Open in IMG/M
3300015279\|Ga0182174_1071564	Not Available	532	Open in IMG/M
3300015281\|Ga0182160_1016550	Not Available	791	Open in IMG/M
3300015281\|Ga0182160_1025115	Not Available	707	Open in IMG/M
3300015282\|Ga0182124_1032098	Not Available	658	Open in IMG/M
3300015283\|Ga0182156_1076642	Not Available	524	Open in IMG/M
3300015285\|Ga0182186_1008995	Not Available	948	Open in IMG/M
3300015285\|Ga0182186_1075638	Not Available	518	Open in IMG/M
3300015285\|Ga0182186_1078543	Not Available	511	Open in IMG/M
3300015286\|Ga0182176_1030269	Not Available	696	Open in IMG/M
3300015286\|Ga0182176_1047324	Not Available	607	Open in IMG/M
3300015287\|Ga0182171_1043919	Not Available	618	Open in IMG/M
3300015287\|Ga0182171_1049660	Not Available	598	Open in IMG/M
3300015287\|Ga0182171_1080075	Not Available	518	Open in IMG/M
3300015288\|Ga0182173_1024917	Not Available	716	Open in IMG/M
3300015288\|Ga0182173_1033730	Not Available	659	Open in IMG/M
3300015291\|Ga0182125_1008749	Not Available	985	Open in IMG/M
3300015291\|Ga0182125_1063402	Not Available	568	Open in IMG/M
3300015292\|Ga0182141_1015972	Not Available	832	Open in IMG/M
3300015292\|Ga0182141_1085826	Not Available	517	Open in IMG/M
3300015294\|Ga0182126_1036981	Not Available	666	Open in IMG/M
3300015294\|Ga0182126_1080730	Not Available	530	Open in IMG/M
3300015296\|Ga0182157_1085031	Not Available	534	Open in IMG/M
3300015298\|Ga0182106_1026061	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	755	Open in IMG/M
3300015300\|Ga0182108_1080381	Not Available	550	Open in IMG/M
3300015300\|Ga0182108_1080895	Not Available	548	Open in IMG/M
3300015300\|Ga0182108_1102949	Not Available	508	Open in IMG/M
3300015304\|Ga0182112_1026733	Not Available	754	Open in IMG/M
3300015304\|Ga0182112_1040376	Not Available	670	Open in IMG/M
3300015305\|Ga0182158_1100771	Not Available	508	Open in IMG/M
3300015307\|Ga0182144_1031853	Not Available	725	Open in IMG/M
3300015314\|Ga0182140_1078560	Not Available	569	Open in IMG/M
3300015314\|Ga0182140_1097248	Not Available	531	Open in IMG/M
3300015321\|Ga0182127_1052392	Not Available	660	Open in IMG/M
3300015321\|Ga0182127_1078441	Not Available	584	Open in IMG/M
3300015321\|Ga0182127_1110602	Not Available	522	Open in IMG/M
3300015321\|Ga0182127_1125672	Not Available	501	Open in IMG/M
3300015321\|Ga0182127_1125812	Not Available	500	Open in IMG/M
3300015322\|Ga0182110_1051044	Not Available	663	Open in IMG/M
3300015322\|Ga0182110_1097380	Not Available	544	Open in IMG/M
3300015322\|Ga0182110_1114468	Not Available	516	Open in IMG/M
3300015323\|Ga0182129_1086769	Not Available	550	Open in IMG/M
3300015341\|Ga0182187_1070521	Not Available	728	Open in IMG/M
3300015341\|Ga0182187_1168949	Not Available	535	Open in IMG/M
3300015342\|Ga0182109_1150894	Not Available	585	Open in IMG/M
3300015342\|Ga0182109_1172475	Not Available	555	Open in IMG/M
3300015343\|Ga0182155_1016781	Not Available	1208	Open in IMG/M
3300015343\|Ga0182155_1059798	Not Available	807	Open in IMG/M
3300015343\|Ga0182155_1205090	Not Available	520	Open in IMG/M
3300015344\|Ga0182189_1085578	Not Available	725	Open in IMG/M
3300015344\|Ga0182189_1164543	Not Available	571	Open in IMG/M
3300015345\|Ga0182111_1134425	Not Available	634	Open in IMG/M
3300015345\|Ga0182111_1150841	Not Available	607	Open in IMG/M
3300015345\|Ga0182111_1157504	Not Available	597	Open in IMG/M
3300015345\|Ga0182111_1241901	Not Available	504	Open in IMG/M
3300015346\|Ga0182139_1161047	Not Available	593	Open in IMG/M
3300015346\|Ga0182139_1221919	Not Available	523	Open in IMG/M
3300015346\|Ga0182139_1245359	Not Available	502	Open in IMG/M
3300015347\|Ga0182177_1053159	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	896	Open in IMG/M
3300015347\|Ga0182177_1159037	Not Available	598	Open in IMG/M
3300015351\|Ga0182161_1173795	Not Available	598	Open in IMG/M
3300015351\|Ga0182161_1179317	Not Available	591	Open in IMG/M
3300015355\|Ga0182159_1068331	Not Available	998	Open in IMG/M
3300015355\|Ga0182159_1301557	Not Available	537	Open in IMG/M
3300015361\|Ga0182145_1135622	Not Available	568	Open in IMG/M
3300017404\|Ga0182203_1146929	Not Available	521	Open in IMG/M
3300017407\|Ga0182220_1033168	Not Available	698	Open in IMG/M
3300017407\|Ga0182220_1090761	Not Available	529	Open in IMG/M
3300017409\|Ga0182204_1032776	Not Available	741	Open in IMG/M
3300017409\|Ga0182204_1114893	Not Available	508	Open in IMG/M
3300017413\|Ga0182222_1051241	Not Available	612	Open in IMG/M
3300017417\|Ga0182230_1107527	Not Available	519	Open in IMG/M
3300017438\|Ga0182191_1134492	Not Available	559	Open in IMG/M
3300017442\|Ga0182221_1098703	Not Available	597	Open in IMG/M
3300017443\|Ga0182193_1059874	Not Available	752	Open in IMG/M
3300017682\|Ga0182229_1098936	Not Available	517	Open in IMG/M
3300017683\|Ga0182218_1076075	Not Available	625	Open in IMG/M
3300017683\|Ga0182218_1089359	Not Available	595	Open in IMG/M
3300017683\|Ga0182218_1137910	Not Available	520	Open in IMG/M
3300025940\|Ga0207691_11260257	Not Available	612	Open in IMG/M
3300025942\|Ga0207689_10526152	Not Available	992	Open in IMG/M
3300026089\|Ga0207648_10554349	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	1056	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	81.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	81.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	81.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	81.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	9.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015288	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017417	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068869_1003653901	3300005334	Miscanthus Rhizosphere	MCSPKSMLATTGVPERVLGLRGFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGRAVEVWDLLIAEVPASLSLVSATAGRTSRGIGSTKFRPSSCKKG*
Ga0068868_1004613792	3300005338	Miscanthus Rhizosphere	MLATTGVPERVLGLRGFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNLEETPGSAVENGNLLVAEAPASFSPVFATAGRTSRGIGSTKLHPNSNEKE*
Ga0068868_1005728002	3300005338	Miscanthus Rhizosphere	MCSPKSMLATTGVPEGVLGLRGFLETGKPDEDPSIRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGRAVKVRDLLIAEVPARRSPVSATAGRTSRGIGSTKFRPSSCEKR*
Ga0070673_1012355412	3300005364	Switchgrass Rhizosphere	MSSPKSMLATTGVPEKVLGLRGFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGRAVEVWDLLIAEVPASLSPVSATAGRTSRGIGSTKFRPSSCEKG*
Ga0068867_1002964731	3300005459	Miscanthus Rhizosphere	MSSPKSMLATTGVPERVLGLRGFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGRAVEVWDLLIAEVPASLSPVSATAGKASGETGSTKFRPNSCENG*
Ga0068867_1008847692	3300005459	Miscanthus Rhizosphere	MCSPKSMLATTGVPGRVLGLRGFLETGRPDEDPSVRPLFGTLQGPRGTRRGTYSSYTSTNPEETPGRAAEVWDLLTAEVPASLSPVSAAARKASGETGSTKFRPNSCEKG*
Ga0068867_1016534001	3300005459	Miscanthus Rhizosphere	GRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPKETPGSAVENGNLLVVEAPASFSPVFATAGRTSRGIGSTKLHPNSYEKE*
Ga0068856_1016464182	3300005614	Corn Rhizosphere	MLATTRVPEGVLGLRGFLEAGKPDEDPSIRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGRAVEVWDLLIAEVPASLSPVSATAGRTSRGIGSIKFHPSSYEKG*
Ga0068866_108765882	3300005718	Miscanthus Rhizosphere	MLATTGVPERVLGLRDFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGSAVEVGDLLVAEVPASLSPVSATAGRTSRGIGSTKFRPSSYEKG*
Ga0068865_1011488201	3300006881	Miscanthus Rhizosphere	MLATTGVPRRVLGWRDFLEAGKLDEEPSARPLFGTLRGPRGTGRGTYSSYTSTTPEETPGNTVVIGNLLVTEAPARFSPVFTTAGRTSRGIGSTKLRPNSYKEE*
Ga0105243_120243722	3300009148	Miscanthus Rhizosphere	MLATTGVPEGVLGLQGFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGRAVEVWDLLIAEVPASLSPVSATAGKTSGETGSTKFRPSSCEKE*
Ga0157374_127345861	3300013296	Miscanthus Rhizosphere	MLATTGVPERVLGLRGFLEIGRPNEDPSVRPLFGTLRGPRGTRQGTYSSYTSTNPEVTPGSAVEDGDLLVAEVPASLSPVSAMAGRTSRGIGSTKFHPSSYEKG*
Ga0157378_107786402	3300013297	Miscanthus Rhizosphere	LETGKSDEDPFVHPLFGTLRGPRGTRRGTYSSYTSTNPEETPGSTVENGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0157378_116965731	3300013297	Miscanthus Rhizosphere	MLATTGVPGGVLGLRDFLEAGRPNEDPFVRPLFGTLRGPRGTRQGTYSSYTSTNLEETPGSAVEVGDLLVAEVLASLSPVSATAGRTSRGIGSTKFCPSSYEKG*
Ga0157376_112841152	3300014969	Miscanthus Rhizosphere	MLATTGVPGRVLGLRDFLEAGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNLEETPGNTVEIGDLLAAEALASLSPVFPTAGRTSRGI
Ga0157376_119789172	3300014969	Miscanthus Rhizosphere	MLAMTGVPEGVLGLRGFLEAGRPDEDPSVRPLFGTLRGPRGTRQGTYSSYTSTNPEETPGRAVEVWDLLIAEVPAKRSPVSAMAGRTSRGIGSTK
Ga0182122_10343271	3300015267	Miscanthus Phyllosphere	FLEAGRPDEDPSIRPLFETLRGPRGTRRGTYSSYTSTNPEETPGSAVEIGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182188_10189272	3300015274	Miscanthus Phyllosphere	ITGVPERVLGLRDFLEAGRPDEDPSVHPLFGTLRGPWGTRRGTYSSYTSTNPEETLGSAMEIGNLLVAEAPASFSPVFATVGRTSRGIGSTKLRSNSYEKE*
Ga0182172_10581771	3300015275	Miscanthus Phyllosphere	MLATTGVPGRVLGLRDFLEAGRPDEDPSVRPLFETLQGPRGTRRGTYSSYTSTNPEETPGSAVEIGNLLVAEAPASFSPVFATVGRTSRGIRSTKLHPNSYEKE*
Ga0182174_10715641	3300015279	Miscanthus Phyllosphere	MLATTRVPGGVLGLRDFLEASRPDEFPSVRPLFETLRGPRGTRRGTYSSYTSTNPEETSGNAVEIGDLLVAEAPVSFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182160_10165501	3300015281	Miscanthus Phyllosphere	PKSMLATTKVPGRVLGLRDFSEAGRLDEEPSVHPLFKMLRGPQGTGRGTYSSYTSTTPEETLGNDVVIWNLLITEAPARSSPVFTTAGRTSRGIGSTKLHPNSYKEE*
Ga0182160_10251151	3300015281	Miscanthus Phyllosphere	MLATAGVPGRVLGLRDFLEAGRLDEDPSVHPLFGTLRGPRGTRRGTYSSNTSTNLEETPGSAVENGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182124_10320982	3300015282	Miscanthus Phyllosphere	RVPGRVLGLRDFLEAGRPDEDPSVRPLFGTLCGPWGTRRGTFSSYTSTNPEEILGSAVENGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182156_10766421	3300015283	Miscanthus Phyllosphere	ICSPKSMLATTRVPGGVLGLRDFLEAGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNLEETPGNAMEIVDLLVAEAMASSFPVFATTGETAREGIGSTKLRPNSYKKE*
Ga0182186_10089952	3300015285	Miscanthus Phyllosphere	MLATTGVPGRVLGLRDFLEAGRPDEDPSIRPLFGTLRGPRGTRRGTYSSYISTNPEETPGSAVEIGNLLVAEAPASFSLVFATAGRTSRGTGSTKLCPNSYEKE*
Ga0182186_10756382	3300015285	Miscanthus Phyllosphere	LEEGRPDEDPSVRPLFETLRGPRGTRRGTYSSYTSTNPKETPGNTMEIRNLLVAEAPASFSPVFTTAGRTSRGIGSTKLCPNSYEKE*
Ga0182186_10785431	3300015285	Miscanthus Phyllosphere	KSMLATTGVPRGVLGLRDFLEEGRPDEDPSIRPLFGTLRGPWGTRRGTYSSYTSTNLEETPGSAVEIGNLLVAEALASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182176_10302691	3300015286	Miscanthus Phyllosphere	CSPKSMLATTGVPGGVLGLRDFLEAGRPDEDPSVRPCFETLRGPWGTRRGTYSSYTSTNPEETLGNVVEIGDLLVAEATASSFLVFAMTGGTAREGIGSTKLRPNSYEKE*
Ga0182176_10473242	3300015286	Miscanthus Phyllosphere	MLATTGVPERVLGLRDFLETGRPDEDPSVRPLFETLRGPRGTRRGTYSSYTSTNPEETLGSAVEVGNLLVTEVPASLSPVSAMAGRTSRGIGSTKFCPSSYEKG*
Ga0182171_10439192	3300015287	Miscanthus Phyllosphere	MLATTGVPEGLLGLRDFLETGRPDEDPSVRPLFGTLRGPQGTRRGTYSSYTSTNPEETPGSAVEVGDLLVAEVPASLSPVSAMAGRTSRGIGSTKFRPSSYEKG*
Ga0182171_10496601	3300015287	Miscanthus Phyllosphere	MLATTGVPGGVLGLRDFLEAGRPDEDPSVHPLFETLRGPQGTRQGTYSSYTSTNPEETPGSAVEIGNLLVAEAPTSFSLVFTTAGRTSRGIGSIKLRPNSYEKE*
Ga0182171_10800751	3300015287	Miscanthus Phyllosphere	MLATTGVPRGVLGLRDFLEAGRPDEDPSVCPLFETLRGPWGTRRGTYSSYTSTNPEETPGNAGEIRDLLVAEAPPSSFPVFVVTGGTTREGIGSTRLRPNSYEKE*
Ga0182173_10249171	3300015288	Miscanthus Phyllosphere	KSMLATTRVPGQVLSLRDFLEAGRLDEEPSVRPLFETLRGPRGTGRGTYSSYTSTTPEETPGNDVVIWNLLITEALARSSPVFTTAGRTSRGIGSTKLHPNSYKEE*
Ga0182173_10337302	3300015288	Miscanthus Phyllosphere	MLATTGVPEGVLGLRGFLETGRPDEDPSVCPLFGTLRGPQGTRRGTYSSYTSANPEETLGSAVEGGDLLVAEVPASLSPVSATAGRTSRGIGSTKFRPSSYEKG*
Ga0182125_10087492	3300015291	Miscanthus Phyllosphere	MLATTGVPRRVLGLRDFLEAGRPDEDPSVCPLFGTLRGPRGTRRGTYSSYTSTNLEETLGSAMENGNLLVAEAPASFSLVFVMSGRTSRGIGSTKLRPNSYEKE*
Ga0182125_10634021	3300015291	Miscanthus Phyllosphere	SPKSMLATTGVPGGVLGLRDFLEAGRLDEDPSVCPLFETLRGPWGTRRGTYSSYTSTNPEETPGNAGEIRDLLVAEAPPSSFPVFVVTGGTTREGIGSTRLRPNSYEKE*
Ga0182141_10159722	3300015292	Miscanthus Phyllosphere	MLATTGVPRRVLGLRDFLEAGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGSAVENGNLLVVEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182141_10858262	3300015292	Miscanthus Phyllosphere	LEAGRPDEDPSICPLFETLRGPWGTRRGTYSSYTSTNLEETLGNAVEIGDLLVAEAPASSFPVFATTGGTTREGIGS
Ga0182126_10369812	3300015294	Miscanthus Phyllosphere	MLATTRVPGRVLGLQDFLEAGRPDEDPSIRPVFETLRGPRGTKRGTYSSYTSTNLEETLGNAVEIGDLLVAEAPASSFPVFATTGGTTREGIRSTKLRPNSYEKE*
Ga0182126_10807301	3300015294	Miscanthus Phyllosphere	KICSPKSMLATTRVPGRVLGLRDFLEVGRPDEDPSVRPLFETLRGPRGTRRGTYSSYTSTNPEETPGSAVEIGNLLVAEAPASFSSVFATVGRTSRGIGSTKLRPNSYEKE*
Ga0182157_10850311	3300015296	Miscanthus Phyllosphere	MLATTGVPERVLGLRGFLETGRLDEDPSIRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGNAVEVGDLLVAEVPASLSPVSATAGRTSRGIGSTKFRPSSYEKG*
Ga0182106_10260611	3300015298	Miscanthus Phyllosphere	PKSMLATTGVPRGVLGLRDFLEAGRPDEDPSVCPLFETLRGPRGTRRGTYSSYTSTNLEETPGNAMEIGDLLVAEAPASFFPVFAMTGGTTREGIGSTKLRPNSYEKE*
Ga0182108_10803811	3300015300	Miscanthus Phyllosphere	MLATTGVPGGVLGLQDFLEAGRPDEDPSVRPLFETLRGPRGTRRGTYSSYTSTNPEETLGNAMEIGDLLVAETTTSSFPVFATTGGTAREGIGSTKLRPNSYEKE*
Ga0182108_10808951	3300015300	Miscanthus Phyllosphere	MLATTGVPGRVLGLQDFLEAGRLDEDPSVRPLFETLRGPRGTRRGTYSSYTSTNPEETSGSAVEIRNLLVAEAPASFSPVFATVGRTSRGIGSTKLRPNSYEKE*
Ga0182108_11029491	3300015300	Miscanthus Phyllosphere	MLATTGVPRGVLGLRDFLEAGRPDEDPSIRPLFETLRGSRGTKRGTYSSYTSTNPEETLGNTVEIGDLLVAEAPMSSFPVFDTIGGTVREGIG
Ga0182112_10267333	3300015304	Miscanthus Phyllosphere	MLATTGVPRRVLGLRDFLEAGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGSAVEIGNLLVAEALASFSPVFATAGRTSRGIGSTKLRPNS
Ga0182112_10403761	3300015304	Miscanthus Phyllosphere	MLATTGVPRTVLGLRDFLETGRPDENPSIHPLFETLRGPRGTRRGTYSSYTSTNPEETPGNAGEIRDLLVAEAPPSSFPVFVVTGGTTREGIGSTRLRPNSYEKE*
Ga0182158_11007711	3300015305	Miscanthus Phyllosphere	KQRDREYKICSPKSMLATTGVLRRVLGLRDFLEAGKPDEDPSIRPLFETLRGPRGTRQGTYSSYTSTNPEETPGNTMEIGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182144_10318532	3300015307	Miscanthus Phyllosphere	MLATTGVPRGVLGLRDFLEAGRPDEDPSVCPLFETLRGPWGTRRGTYSSYTSTNPEETPGNAGEIRDLLVAEAPPSSFPVFVVTGGTTREGIGS
Ga0182144_10984791	3300015307	Miscanthus Phyllosphere	MLATTGVPERVLGLQGFLETGRPDEDPSVRPLFRTLQGPRGTRRGTYSSYTSTNSEETPGSAVEVGDLLVAEVPASLSPVSATA
Ga0182140_10785601	3300015314	Miscanthus Phyllosphere	MLATIGVPRRVLGLRDFLEAGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETLGTAVENRNLLVAEAPSSFSLVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182140_10972482	3300015314	Miscanthus Phyllosphere	LEAGRPDEDPSVRPLFETLRGPWGTRRGTYSSYTSTNPEETPGNAVEIGDLLVAEAPPSSFLVFATAGGTTREGIGSTKLRPNSYEKE*
Ga0182127_10523921	3300015321	Miscanthus Phyllosphere	CSPKSMLATTEVPGRVLGLRDFLEAGRPDEDPSVHPLFGTLRGPRGTRRGTYSSYTSTNLEETPGSAVEIGNLLVAEAPASFSLVFAMAGRTSRGIGSTKLRPNSYEKE*
Ga0182127_10784411	3300015321	Miscanthus Phyllosphere	TRFKIKTRKQRDREYKICSPKSMLATTRVPGGVLGLRDFLEASRPDEYPSVRPLFETLRGPRGTRRETYSSYTSTNLEETPGNTMEIGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182127_11106021	3300015321	Miscanthus Phyllosphere	MSSPKSMLATTGVPEKVLGLRGFLETGRPDEDPSVHPLFGTLRGPRGTIRGTYSSYTSTNPEETPGRAVVVWDLLIAEVPASLPSVSATTGKASGETGSTKFRPNSCENG*
Ga0182127_11256721	3300015321	Miscanthus Phyllosphere	MLATTGVPGRVLGLRDFLEAGRPDEDPSVRPLFGTLRGPRETRRGTYSSYTSINPEETLLSAVENGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182127_11258121	3300015321	Miscanthus Phyllosphere	MLATTGVPGRVLGLRDFLEAGRPDEEPSVCPLFETLRGPRGTRRGTYSSYTSTNPEETPGNTMEIGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYKKE*
Ga0182110_10510442	3300015322	Miscanthus Phyllosphere	LEAGRPDEDPSIRPFFETLRGPRGTRQGTYSSYTSTNPEETPGNAVEIGDLLVAEATVSSFLVFATTGGTAREGIGSTKLRPNSYEKE*
Ga0182110_10973801	3300015322	Miscanthus Phyllosphere	LETGKPDEEPSARPLFEMLRGPRGIGRGTYSSYTSTTPEETLGNDVVIWNLLITEALARSSPVFTMAGRTSRGIGSTKLRPNSYKEE*
Ga0182110_11144681	3300015322	Miscanthus Phyllosphere	GVLGLRDFLEAGRPDEDPSVRPLFETLRGPQGTRRGTYSSYTSTNPEETLGNAMEIGDLLVAEAPASSFPVFATTGGTTREGIGSTKLCPNSYEKE*
Ga0182129_10867691	3300015323	Miscanthus Phyllosphere	TRKQRDREYKICSPKSMLATTRVPGGVLGLRDFLEAGRPDEDPSVHPLFETLRGPRGTRRVTYSSYTSTNPEETLGNAVEIGDLLATEAPASLSPVFAMVGRTSREIGSTKLCPNSYKKE
Ga0182187_10705212	3300015341	Miscanthus Phyllosphere	MLATTGVPGRVLGLRDFLEAGRPDEEPSVRPLFETLRGPRGTRRGTYSSYTSTNPEETPGNNVEIGNLLVVEAPASFSLVFATAGRTLRGIGSTKLRPNSYEKG*
Ga0182187_11689491	3300015341	Miscanthus Phyllosphere	LATTGEPRGVLGLRDFLEAGRPDEDPSVRPFFETLRGPWGTRRGTYSSYTSTNPEETPGNTVSIRNLLVMEAPARFSLGFTTAGRTSRGIRSTKLRPNSYEKE*
Ga0182109_11508942	3300015342	Miscanthus Phyllosphere	MLATTGVPEGLLGLRDFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYISINPEETPGSAVEVGNLLVTEVPASLSLVSAMAGRTSRGVESTKFRPSSYEKG*
Ga0182109_11724751	3300015342	Miscanthus Phyllosphere	MLATTRVPGRVLGLRDFLEAGRPDEDPSVRPLFGTLCGPRGTRRGTYSSYTSTHPEETPGSAVENGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182155_10167811	3300015343	Miscanthus Phyllosphere	MLATTGVPRRALGLRDFLEAGRPDEDPSIRPLFETLRGPRGTRRGTYSSYTSTNPEETLGNAMEIGDLLVAEATASSFLVFAMTGGTAREGIGSTKLCPNSYKKE*
Ga0182155_10597983	3300015343	Miscanthus Phyllosphere	MLATTGVPGRVLGLRDFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYASTNPEETPGSAVENRNLLVAEAPASFSLVFTTTGRTSRGIGSTKLRPNSYEKE*
Ga0182155_12050901	3300015343	Miscanthus Phyllosphere	MLATTGVPERVLGLRGFLETGRPDEDPSVRPLFGTLRGLRGTRQGTYSSYTSTNPEETPGSAMEGGDLLVAEVPTSLSPVSATVGRTSRGIGSTKFRPSSYEKG*
Ga0182189_10855781	3300015344	Miscanthus Phyllosphere	MLATTRVPGRVLGLRDFLEAGRPDEDQSVRPLFGTLHGPWGTKRGTYSSYISINPEETLGSAVENGNLLVAEAPASFSLIFAMA
Ga0182189_11645431	3300015344	Miscanthus Phyllosphere	MLATTGVPGRVLGLRDFLEAGRPDEDPFVCPLFETLRGPQGTKRGTYSSYTSTNPEETPGSAVENGNLLVAEAPASFSPVFAMAGRTSRGIGSTKLRPNSYEKE*
Ga0182111_11344251	3300015345	Miscanthus Phyllosphere	EAGRPDEDPSIRPVFETLRGPRGTKRGTYSSYTSTNLEETLGNAMEIGDLLVAEATASSFPAFTTTGGTAREGIGSTKLHPSSYEKE*
Ga0182111_11508411	3300015345	Miscanthus Phyllosphere	MLAITGVPGRVLGWRDFLETGKPDEEPSARPLFETLRGPRGTGRGTYSSYTSTTPEETPGNTMVIWNLLVTEAPARFSPVFTTAGRTSKGIGSTKLRPNS*
Ga0182111_11575042	3300015345	Miscanthus Phyllosphere	GFLETGRLEEDPSVRPLFGTLRGPRGTRQGTYSSYTSTTPEETLGNTVVIGNLLVTEALGRFSPVFTMTRRTSRGIGSTKLRPNSYKKE*
Ga0182111_12419012	3300015345	Miscanthus Phyllosphere	LATTRVPGGVLGLRDFLEAGKPDEDPSVRPLFETLRGAWGTRQGTYSSYTSTNPEETPGNTMEIGNLLVVEAPASFSLVFATAGRTSRGIRSTKLRPNSYEKE*
Ga0182139_11610472	3300015346	Miscanthus Phyllosphere	MLATTGVPERVLGLRDFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGSAVEVGDLLVAEVPASLSPVSPTARRTSRGIGSTKFRPSSYKKG*
Ga0182139_12219191	3300015346	Miscanthus Phyllosphere	MLATTGVPGRVLGLRDFLEAGRPDEDPSVRPLFGTLCGPWGTRRGTFSSYTSTNPEEILGSAVENGNLLVAVAPASFSPVFATAGRTSRGIGSTKLRPNS
Ga0182139_12453591	3300015346	Miscanthus Phyllosphere	TTGVPEGVLGLRGFLETGRPDEDPSVRPLFGTLRGPRGTKRGTYSSYTSTNPEETLGRAVEVWDLLIAEVPAKRSLVSATAGRTSRGIGSTKFRPSSYEKE*
Ga0182177_10531591	3300015347	Miscanthus Phyllosphere	MLATTGIPGRVLGLRDFLGAGRPDEDPSVRPLFERLRGPRGTRRGTYSSYTSTNPEETLGNTVEIGNLLVAEAPASFPPVFATAGRTSRGIGSTKLRPNSYEKE*
Ga0182177_11590371	3300015347	Miscanthus Phyllosphere	AGRPDEDPSIRPLFETLRGPRGTRRGTYSSYTSTNPEETLGNTVEIRNLLVVEASASFSPVFATAGRTSRGIGSTKLHPNSYEKE*
Ga0182161_11737951	3300015351	Miscanthus Phyllosphere	DFLEAGRPDEDPSVRPLFETLQGPWGTRRGTYSSYTSTNPEETPGNTMEIGDLLVAEATVSSFLVFTTIGGTTREGIGSTKLRPNSYKKE*
Ga0182161_11793172	3300015351	Miscanthus Phyllosphere	EAGRPDEDPSVHPLFETLRGPRGTRRGTYSSYTSTNLEETPGNAVEIGDLLAAEALASLSPVFATAGRTSRGIGSTKLRPNSYKKE*
Ga0182159_10683312	3300015355	Miscanthus Phyllosphere	MLATTRVPGRVLGLRDFLEAGRPDEDPSVRPLFGTLCGPWGTRRGTFSSYTSTNPEEILGSAVENGNLLVAVAPASFSPVFATAGRTSRGIGSTKLHPNSNEKE*
Ga0182159_13015571	3300015355	Miscanthus Phyllosphere	KQRDSEDKICSPRSMLATTGVPGRELGLRDFLEAGRPDEDPSVHPLFGTLRGPRGTRRGTYSSYTSTNPEETLGSAVEIGNLLVAEAPASFSLVFATAGRTSRGIGSIKLHPNSYKKE*
Ga0182145_11356221	3300015361	Miscanthus Phyllosphere	ATTRVPRRVLGLQDFLEAGRPNEDPSIRPLFETLRGPRGTRRGTYSSYTSTNPKETPGNAMEIGDLLVAEATASSFLVFATTGGTAREGIGATKLRPSSYEKE*
Ga0182203_11469292	3300017404	Miscanthus Phyllosphere	LEVGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSINPEETPGSAVENGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE
Ga0182220_10331682	3300017407	Miscanthus Phyllosphere	MLATTGVPRGVLGLRDFLEAGRLDEDPSIRPLFETLRGPQGTRRGTYSSYTSTNPEETPGNTMKIGNLLVAEALASFSPVFATAGRTSRGIGSTKLRPNSYEKE
Ga0182220_10907611	3300017407	Miscanthus Phyllosphere	LLGSRPDEDPSVRPLFGTLRGPWGTRRGTYSSYTSTNPEETPGSAVEIGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE
Ga0182204_10327763	3300017409	Miscanthus Phyllosphere	MLATTGVPRRVLGLRDFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEVTLGSAVEDGDLLVAEVPASLSPVSATAG
Ga0182204_11148931	3300017409	Miscanthus Phyllosphere	RVLGLRGFLETGRPDEDPSVRPLFGTLHGPRGTRRVTYSSYTSTNPEETLGSTVENGNLLVAEAPASFSLVFATAGRTSRGIGSTKLRPNSYEKE
Ga0182222_10512411	3300017413	Miscanthus Phyllosphere	DFLEAGCPDEDPSVRPLFVTLRGPWGTRRGTYSSYTSTNPKETPRNAVEIGDLLVAEATASSFLVFATTGGIAREGIGSTKLRPNSYEKE
Ga0182230_11075271	3300017417	Miscanthus Phyllosphere	VPERALGLRGFLETGRLDEDPSVHPLFGTLQGPRGTRRGTYSSYTSTNPEETPGSAMEVGDLLVAEVPASLSTVSATAGRTSRGIGSTKFCPSSYEKG
Ga0182191_11344921	3300017438	Miscanthus Phyllosphere	DFLEAGRPDEDPSICPLFETLRGPRGTRRGTYSSYTSTNLEETPGNAVEIGDLLVAEARASSFPVFATTGGTTREGIESTKLRPNSYKKE
Ga0182221_10987031	3300017442	Miscanthus Phyllosphere	MLATTGVPERLLGLRDFLETGRPDEDPSVRPLFETLRRPRGTRRGTYSSYTSTNLEETPGNAVEIGDLLVAEATVSSFLVFATTGGTAREGIGSTKLRPNSYKKE
Ga0182193_10598742	3300017443	Miscanthus Phyllosphere	MLATTGVPGRVLGLRDFLEAGRPDEDPFVRPLFGTLRGPRGTGRGTYSSYTSTNPEETPGNTMVIWNLLVIEDPARFSPVLTMAGRTSRGI
Ga0182229_10989362	3300017682	Miscanthus Phyllosphere	GRLDEDPSIHPLFETLRGPRGTRRGTYSSYTSTNLEETPGNVVEIGDLLVAEAMTSSFLVFATTGGTTREGIRSTKLRPNSYEKE
Ga0182218_10760751	3300017683	Miscanthus Phyllosphere	RGFLETGRPDVDPSVRPLFGTLRGLRGTRQGTYSSYTSTNPEETPGNAVEIGDLLVAEATVSSFLVFATTGGTAREGIGSTKLRPNSYEKE
Ga0182218_10893592	3300017683	Miscanthus Phyllosphere	MLATTGVPEGLLGLRDFLETGRPDEDPSVRPLFGTLRGPRGTRRGIYSSYTSTNPEETPGSAVEVGNLLVTEVLASLSPVSAMVGRTSRGIGSTKFRPSSYKKRIK
Ga0182218_11379102	3300017683	Miscanthus Phyllosphere	MLATTGVPEGVLGLRGFLEAGKPDEDPSIRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGRAVKVRDLLIAEVPARRSPGSAMTGGTTREGTRSTKLRPNSYKKE
Ga0207691_112602571	3300025940	Miscanthus Rhizosphere	MLATTGVPRRVLGLRDFLEAGRPDEEPSVRPLFETLRGPWGTRRGTYSSYTSTNPEETPGSAVEVGDLLVAEVLASLSPVSATAGRTSRGIGSTKFRPSSYEKG
Ga0207689_105261522	3300025942	Miscanthus Rhizosphere	MLATTGVPKGLLGLRDFLETGRPDEDPSVRPLFGTLRGPRGTRRGTYSSYTSTNPEETPGSAVEVGNLLVTEVPASLSPVSTMAGRTSRGIGSTKFRPSSYEKG
Ga0207648_105543492	3300026089	Miscanthus Rhizosphere	MLATTGVPRGVLGLRDFLEAGRPDEDPSVRPLFETLRGPWGTRRGTYSSYTSTNLEETPGSAVEIGNLLVAEAPASFSPVFATAGRTSRGIGSTKLRPNSYEKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102685

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences