Metagenome Family F102765

Basic Information
Family ID	F102765
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	99 residues
Representative Sequence	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Number of Associated Samples	83
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.20 %
% of genes near scaffold ends (potentially truncated)	27.72 %
% of genes from short scaffolds (< 2000 bps)	78.22 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (56.436 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.654 % of family members)
Environment Ontology (ENVO)	Unclassified (35.644 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.604 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 66.34% β-sheet: 0.00% Coil/Unstructured: 33.66%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01264	Chorismate_synt	54.46
PF01202	SKI	30.69
PF01761	DHQ_synthase	3.96
PF01220	DHquinase_II	2.97
PF02036	SCP2	0.99
PF05960	DUF885	0.99
PF03551	PadR	0.99
PF02018	CBM_4_9	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0082	Chorismate synthase	Amino acid transport and metabolism [E]	54.46
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	2.97
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.99
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.99
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.99
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.98 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003373\|JGI25407J50210_10010324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2375	Open in IMG/M
3300005338\|Ga0068868_100962258	Not Available	779	Open in IMG/M
3300005347\|Ga0070668_100098153	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300005457\|Ga0070662_100017084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4884	Open in IMG/M
3300005563\|Ga0068855_100587567	Not Available	1202	Open in IMG/M
3300005719\|Ga0068861_100024414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4372	Open in IMG/M
3300006844\|Ga0075428_101214640	Not Available	794	Open in IMG/M
3300006847\|Ga0075431_101116672	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300009093\|Ga0105240_11112712	Not Available	840	Open in IMG/M
3300009098\|Ga0105245_10964232	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300009100\|Ga0075418_11351902	Not Available	772	Open in IMG/M
3300009100\|Ga0075418_12037987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300009147\|Ga0114129_10545187	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300009147\|Ga0114129_11214381	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300009156\|Ga0111538_12623588	Not Available	632	Open in IMG/M
3300009789\|Ga0126307_10303860	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300009789\|Ga0126307_10308617	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300009789\|Ga0126307_10406943	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300009840\|Ga0126313_10092621	Not Available	2209	Open in IMG/M
3300009840\|Ga0126313_11330377	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300010036\|Ga0126305_10192805	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300010037\|Ga0126304_10198755	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300010037\|Ga0126304_10635879	Not Available	720	Open in IMG/M
3300010038\|Ga0126315_10505446	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300010040\|Ga0126308_10269025	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300010041\|Ga0126312_10185737	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300010042\|Ga0126314_10531772	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300010166\|Ga0126306_10381192	Not Available	1100	Open in IMG/M
3300010166\|Ga0126306_10443326	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300014487\|Ga0182000_10615041	Not Available	526	Open in IMG/M
3300017792\|Ga0163161_10066327	All Organisms → cellular organisms → Bacteria	2635	Open in IMG/M
3300018027\|Ga0184605_10106619	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300018051\|Ga0184620_10010913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2064	Open in IMG/M
3300018054\|Ga0184621_10301322	Not Available	565	Open in IMG/M
3300018067\|Ga0184611_1236998	Not Available	648	Open in IMG/M
3300018072\|Ga0184635_10165740	Not Available	882	Open in IMG/M
3300018074\|Ga0184640_10117199	Not Available	1170	Open in IMG/M
3300018076\|Ga0184609_10020577	All Organisms → cellular organisms → Bacteria	2609	Open in IMG/M
3300018081\|Ga0184625_10009874	All Organisms → cellular organisms → Bacteria	4377	Open in IMG/M
3300018422\|Ga0190265_10483153	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300018465\|Ga0190269_10633650	Not Available	731	Open in IMG/M
3300018465\|Ga0190269_10783985	Not Available	683	Open in IMG/M
3300018466\|Ga0190268_10080167	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300018466\|Ga0190268_10364320	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300018466\|Ga0190268_11472412	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300018469\|Ga0190270_10521892	Not Available	1138	Open in IMG/M
3300018476\|Ga0190274_10219837	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300018476\|Ga0190274_11232678	Not Available	833	Open in IMG/M
3300019767\|Ga0190267_10289163	Not Available	841	Open in IMG/M
3300019869\|Ga0193705_1004728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2982	Open in IMG/M
3300019884\|Ga0193741_1014659	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300021078\|Ga0210381_10017940	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300021510\|Ga0222621_1032874	Not Available	1069	Open in IMG/M
3300022694\|Ga0222623_10015221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2837	Open in IMG/M
3300022756\|Ga0222622_10032360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2802	Open in IMG/M
3300022756\|Ga0222622_10099957	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300025933\|Ga0207706_10006575	All Organisms → cellular organisms → Bacteria	10766	Open in IMG/M
3300025949\|Ga0207667_10988231	Not Available	829	Open in IMG/M
3300025972\|Ga0207668_10498449	Not Available	1047	Open in IMG/M
3300026118\|Ga0207675_100014696	All Organisms → cellular organisms → Bacteria	7301	Open in IMG/M
3300028578\|Ga0272482_10039670	Not Available	1226	Open in IMG/M
3300028587\|Ga0247828_10040816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1959	Open in IMG/M
3300028597\|Ga0247820_10917792	Not Available	621	Open in IMG/M
3300028704\|Ga0307321_1038844	Not Available	882	Open in IMG/M
3300028715\|Ga0307313_10010250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2374	Open in IMG/M
3300028716\|Ga0307311_10096269	Not Available	824	Open in IMG/M
3300028717\|Ga0307298_10123694	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300028719\|Ga0307301_10197714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300028722\|Ga0307319_10151095	Not Available	753	Open in IMG/M
3300028722\|Ga0307319_10304335	Not Available	527	Open in IMG/M
3300028744\|Ga0307318_10124870	Not Available	877	Open in IMG/M
3300028744\|Ga0307318_10291302	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300028771\|Ga0307320_10201236	Not Available	778	Open in IMG/M
3300028771\|Ga0307320_10237349	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300028771\|Ga0307320_10417061	Not Available	539	Open in IMG/M
3300028791\|Ga0307290_10024120	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300028793\|Ga0307299_10082904	Not Available	1192	Open in IMG/M
3300028796\|Ga0307287_10250024	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300028796\|Ga0307287_10358568	Not Available	549	Open in IMG/M
3300028807\|Ga0307305_10402096	Not Available	619	Open in IMG/M
3300028809\|Ga0247824_10132633	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300028814\|Ga0307302_10207147	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300028872\|Ga0307314_10050829	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300028880\|Ga0307300_10218105	Not Available	623	Open in IMG/M
3300028881\|Ga0307277_10078163	Not Available	1381	Open in IMG/M
3300028885\|Ga0307304_10113043	Not Available	1098	Open in IMG/M
3300031548\|Ga0307408_100193285	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300031548\|Ga0307408_100289986	Not Available	1366	Open in IMG/M
3300031731\|Ga0307405_10013420	Not Available	4369	Open in IMG/M
3300031824\|Ga0307413_10260502	Not Available	1292	Open in IMG/M
3300031852\|Ga0307410_10126114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1874	Open in IMG/M
3300031901\|Ga0307406_10190634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1500	Open in IMG/M
3300031911\|Ga0307412_10100575	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300032002\|Ga0307416_100097684	All Organisms → cellular organisms → Bacteria	2544	Open in IMG/M
3300032004\|Ga0307414_11055222	Not Available	749	Open in IMG/M
3300032005\|Ga0307411_10055271	All Organisms → cellular organisms → Bacteria	2611	Open in IMG/M
3300032080\|Ga0326721_10025446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2345	Open in IMG/M
3300032180\|Ga0307471_100926260	Not Available	1039	Open in IMG/M
3300034176\|Ga0364931_0042733	Not Available	1359	Open in IMG/M
3300034354\|Ga0364943_0368008	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300034417\|Ga0364941_024480	Not Available	1250	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.30%
Host-Associated	Host-Associated	29.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.43%
Plants	Host-Associated → Plants	29.70%
Aquatic	Environmental → Aquatic	12.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.77%
Sediment	Environmental → Aquatic → Sediment	11.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.94%
Floodplain	Environmental → Terrestrial → Floodplain	2.97%
Freshwater	Environmental → Aquatic → Freshwater	0.99%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.97%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.99%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.99%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	34.65%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	13.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	9.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25407J50210_100103242	3300003373	Tabebuia Heterophylla Rhizosphere	MRRFLLLVFVVCAGASAAFSLWPRQLGGYLALFGQHTSVNSGVAVTVVAALTLLLVTLRVRLWRSERDLARLRHGLTHPMVPAAPVYPTAPVYPAYPVSSWGPRPLR*
Ga0068868_1009622581	3300005338	Miscanthus Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPLR*
Ga0070668_1000981533	3300005347	Switchgrass Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALARPAAPADPVYPVSPVSSWGSRPVR*
Ga0070662_1000170846	3300005457	Corn Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR*
Ga0068855_1005875672	3300005563	Corn Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPLR*
Ga0068861_1000244142	3300005719	Switchgrass Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPVR*
Ga0075428_1012146403	3300006844	Populus Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR*
Ga0075431_1011166722	3300006847	Populus Rhizosphere	MRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR*
Ga0105240_111127122	3300009093	Corn Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALGQPAAPADLVYPVSPVSSWGSRPVR*
Ga0105245_109642322	3300009098	Miscanthus Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPRR*
Ga0075418_113519021	3300009100	Populus Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVTLRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR*
Ga0075418_120379871	3300009100	Populus Rhizosphere	MGRSDSTPEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYP
Ga0114129_105451871	3300009147	Populus Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVTLRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWRSRPLR*
Ga0114129_112143812	3300009147	Populus Rhizosphere	MGRSDSTPEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR*
Ga0111538_126235881	3300009156	Populus Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWRSR
Ga0126307_103038602	3300009789	Serpentine Soil	MRRFLLVVFGGCVAAAAAFALLPGQVAGYLALFERHARVNSGLAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGSRPAR*
Ga0126307_103086172	3300009789	Serpentine Soil	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLGLFERHTQVNSGVAVTVLAVLTLALVALRVRLRRSERDLARRRRGLAQPAAPAFPVYPVSPVSSWGSRPVR*
Ga0126307_104069432	3300009789	Serpentine Soil	MRRFLLLVFGSCAAAAAAFSLWPAQLGGFFALFGQHTRVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPVR*
Ga0126313_100926213	3300009840	Serpentine Soil	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAFPVYPVSPVSSWGSRPVR*
Ga0126313_113303771	3300009840	Serpentine Soil	MRRFLLVVFGGCVAAAAAFALLPGQVAGYLVLFERHARVNSGLAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGS
Ga0126305_101928052	3300010036	Serpentine Soil	MRRFLLVVFGGCVAAAAAFALLPGQVAGYLALFERHARVNSGVAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGSRPAR*
Ga0126304_101987552	3300010037	Serpentine Soil	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLGLFERHTQVNSGVAVTVLAVLTLALVALRVRLRRSERDLARMRRGLAQPAAPAFPVYPVSPVSSWGSRPVR*
Ga0126304_106358792	3300010037	Serpentine Soil	CAAAAAAFALLPGQVAGYLALFERHARVNSGVAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPVYPADPVSSWGSRPAR*
Ga0126315_105054462	3300010038	Serpentine Soil	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLGLFERHTQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVYPVSPVSSWGSRPVR*
Ga0126308_102690252	3300010040	Serpentine Soil	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVYPVSPVSSWGSRPVR*
Ga0126312_101857373	3300010041	Serpentine Soil	MRRFLLVVFGGCVAAAAAFALLPGQVAGYLVLFERHARVNSGLAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGSRPAR*
Ga0126314_105317722	3300010042	Serpentine Soil	MRRLLLVVFGGCVAAAAAFALLPGQVAGYLALFERHARVNSGLAVTVLAVAILALVALRVRLWRSERELARVRRGLAQPVYPFYPAGPVSSWGSRPAR*
Ga0126306_103811922	3300010166	Serpentine Soil	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLGLFERHTQVNSGVAVTVLAVLTLALVALRVRLRRSDRDLARRRRGLAQPAAPAYPGYPVSPVSSWGARPVR*
Ga0126306_104433262	3300010166	Serpentine Soil	MRRFLLVVFGGCAAASAAFALLPGQAAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERELARMRRGLAQPVYPVYPADPVSSWGSRPAR*
Ga0182000_106150411	3300014487	Soil	LLLVFGSCAAAATALALWPGQLGGYLALFSQHTRVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPVR*
Ga0163161_100663271	3300017792	Switchgrass Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPAD
Ga0184605_101066192	3300018027	Groundwater Sediment	MRRFLLLVFLSGAAASAALALMPRQLAGYLALFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSSWGSRPVR
Ga0184620_100109133	3300018051	Groundwater Sediment	MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPVYPVYPVSSWGSRPVR
Ga0184621_103013222	3300018054	Groundwater Sediment	CAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0184611_12369981	3300018067	Groundwater Sediment	MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRALAQPAAPVYPVYPVSSWGSRPVR
Ga0184635_101657402	3300018072	Groundwater Sediment	MRRFLLLGFLSCAAASAAFALLPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPVYPVYPVSSWGSRPVR
Ga0184640_101171991	3300018074	Groundwater Sediment	LMPSQLAGYLALFEQHTLVNSGVAVTVLAVVTLALVALRARLWRSERALARLRRALAQPAAPADPLYPVSPVSSWGSRPVR
Ga0184609_100205773	3300018076	Groundwater Sediment	MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRPVR
Ga0184625_100098745	3300018081	Groundwater Sediment	MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSSWGSRPVR
Ga0190265_104831532	3300018422	Soil	MRRFLLLVFGSCAAAAAAFSLWPAQLGGFFALFGQHTLVNSGLAVTVLAALTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPVR
Ga0190269_106336502	3300018465	Soil	MRRFLLVVFGGCAAAWAAFALLPGQAAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERELARMRRGLAQPVYPVYPADPVSSWGSRPAR
Ga0190269_107839852	3300018465	Soil	MRRFLLLVFGVCVAASAAFALLPRQLAGYLSLFEQHTRVNSGVAVTVLAVLTLTLVALRARLWRAERDLVRLRRDLAQPAPPAYPVYPAYPAGPVSSWGARPLR
Ga0190268_100801671	3300018466	Soil	MRRFLLLVFVSCTAASVAFSLSPRQLDGYLALFERRTVVNSGVAVTVLALLTLALVALRVRLWRSQRELARARRGLVAAQPAALPYPSSAWGPRPVR
Ga0190268_103643202	3300018466	Soil	MRRFLLVVFGGCAAAWAAFALLPGQVAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVYPVSPVSSWGSRPAR
Ga0190268_114724122	3300018466	Soil	MRRFLLLVFVSCTAAPVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLTLLTLALVALRIRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR
Ga0190270_105218922	3300018469	Soil	MRRFLLLVFVSCAAASVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR
Ga0190274_102198373	3300018476	Soil	MRRFLLLVFVSCAAASVAFSLWPRQLDGYLALFERRTVVNSGVAVTVLALLTLALVALRVRLWRSQRELARARHGLVAAQPAALPYPSSAWGPRPVR
Ga0190274_112326782	3300018476	Soil	LVFVSCTAAPVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLAVVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR
Ga0190267_102891632	3300019767	Soil	MRRFLLLVFGSCAAAAAAFSLWPRQLGGFFALFGQHTRVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPVR
Ga0193705_10047284	3300019869	Soil	MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0193741_10146593	3300019884	Soil	MRRFLLLVFGSCAAAAAAFSLWPAQLGGFFALFGQHTLVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRLAQPPVPTYPAYPAYPVSPVSSWGSRPVR
Ga0210381_100179401	3300021078	Groundwater Sediment	MRRFLLLVFLSCAAASAVFAVMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPVYPVY
Ga0222621_10328741	3300021510	Groundwater Sediment	AAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0222623_100152211	3300022694	Groundwater Sediment	RFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSSWGSRPVR
Ga0222622_100323601	3300022756	Groundwater Sediment	MRRFLLLVFLSCAAASAVFAVMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPAGPVYPVSPVSSWGSRPVR
Ga0222622_100999572	3300022756	Groundwater Sediment	MRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRPFR
Ga0207706_1000657512	3300025933	Corn Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYSVSPGSSWGSRPAR
Ga0207667_109882312	3300025949	Corn Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPLR
Ga0207668_104984491	3300025972	Switchgrass Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADLVYPVSPVSSWGSRPL
Ga0207675_1000146965	3300026118	Switchgrass Rhizosphere	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR
Ga0272482_100396701	3300028578	Soil	MRRFLLLVFGSCAAAAAAFSLWPAQLGGFFALFGQHTLVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPTYPAYPAYPVSPVSSWGSRPV
Ga0247828_100408161	3300028587	Soil	MRRFLPPVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR
Ga0247820_109177921	3300028597	Soil	LLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR
Ga0307321_10388441	3300028704	Soil	GGQLMRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRPFR
Ga0307313_100102501	3300028715	Soil	FLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0307311_100962691	3300028716	Soil	MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSP
Ga0307298_101236942	3300028717	Soil	MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSSWGSRPVR
Ga0307301_101977142	3300028719	Soil	MRRFLLLVFLSCAAASAVFAVMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSSWGSRPVR
Ga0307319_101510952	3300028722	Soil	MRRFLLVVFGGCAAASAAFALLPGQAAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERELARMRRGLAQPVYPVYPADPVSSWGSRPAR
Ga0307319_103043352	3300028722	Soil	MRRFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSPVSSWG
Ga0307318_101248701	3300028744	Soil	MRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSSWGSRPVR
Ga0307318_102913021	3300028744	Soil	MRRFLLLVFLSGAAASAALALMPRQLAGYLALFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSS
Ga0307320_102012362	3300028771	Soil	MRRFLLLVFLSCAAASTVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0307320_102373492	3300028771	Soil	MRRFLLVVFGGCAAASAAFALLPGQAAGYLALFEQHARVNSGVAVTVLAVAILALVALRVRLWRSERELARMRRGLAQPVYPLYPADPVSSWGSRPAR
Ga0307320_104170611	3300028771	Soil	MRRFLLLVFLSGAAASAALALMPRQLAGYLALFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPTFPAYPVSPVSSWGSRPAR
Ga0307290_100241203	3300028791	Soil	MRRFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0307299_100829041	3300028793	Soil	MRRFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR
Ga0307287_102500242	3300028796	Soil	MRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVSSWGSRPVR
Ga0307287_103585681	3300028796	Soil	VFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0307305_104020961	3300028807	Soil	MRRFLLLVFLSCAAASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0247824_101326332	3300028809	Soil	MRRFLLLVFLSCATASAAFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPAR
Ga0307302_102071472	3300028814	Soil	MRRFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPLYPVSPVSSWGSRPVR
Ga0307314_100508292	3300028872	Soil	MRRFLLLVFLSCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0307300_102181052	3300028880	Soil	MRRFLLLVFLSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRP
Ga0307277_100781631	3300028881	Soil	RFLLLVFLFCAAASAVFALMPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVSPVSSWGSRPVR
Ga0307304_101130431	3300028885	Soil	MRRFLLLVFGSCAAASAALALMPGQLAGYLVLFERHTQVNSGVAVTVLAVVTLALVALRVRLWRSERDLARLRRGLAQPAAPAYPAYPVAPVSSWGSRPFR
Ga0307408_1001932853	3300031548	Rhizosphere	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPAYPPYPVSPVSSWGSRPAR
Ga0307408_1002899861	3300031548	Rhizosphere	MRRFLLLVFVVCAGASAAFSLWPRQLGGYLALFGQHTSVNSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPV
Ga0307405_100134203	3300031731	Rhizosphere	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVYPVSPVSSWGSRPVR
Ga0307413_102605022	3300031824	Rhizosphere	MRRFLLLVFVVCAGASAAFSLWPRQLGGYLALFGQHTSVNSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPVYPAYPASSWGPRPLR
Ga0307410_101261142	3300031852	Rhizosphere	MRRFLLLVFVVCAGASAAFSLWPRQLGGGYLALFGQHTSVDSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPV
Ga0307406_101906342	3300031901	Rhizosphere	MRRFLLLVFVVCAGASAAFSLWPRQLGGYLALFGQHTSVNSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPVYPAYPVSSWGPRPLR
Ga0307412_101005752	3300031911	Rhizosphere	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVYPVSPVSSWGSRPAR
Ga0307416_1000976844	3300032002	Rhizosphere	MRRFLLLVFVVCAGASAAFSLWPRQLGGGYLALFGQHTSVDSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPVYPAYPASSWGPRP
Ga0307414_110552222	3300032004	Rhizosphere	LVFVVCAGASAAFSLWPRQLGGGYLALFGQHTSVDSGVAVTVVAVLTLLLGALRVRLWRSERDLARLRRGLTQPMAPVYPAYPVSSWGPRPLR
Ga0307411_100552712	3300032005	Rhizosphere	MRRFLLLVFLSCAAAAAAVALMPRQLAGYLALFERHMQVNSGVAVTVLAVLTLALVALRVRLWRSERDLARMRRGLAQPAAPAYPVSPVSSWGSRPVR
Ga0326721_100254461	3300032080	Soil	MRRFLLLVFGSCAAAAAAFSLWPRQLGGFVALFGQHTRVNSGVAVTVLATLTLLLVALRVRLWRSERDLARMRRGLAQPPVPVYPAYPVSPVSSWGSRPVR
Ga0307471_1009262602	3300032180	Hardwood Forest Soil	MRRFLLLVFLSCAAASAAFALLPSQLAGYLALFERHTLVNSGVAVTVLAVVTLALVALRARLWRSERDLARLRRALAQPAAPADPVYPVS
Ga0364931_0042733_859_1188	3300034176	Sediment	MGRSDSTPEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRIMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR
Ga0364943_0368008_87_416	3300034354	Sediment	MGRSDSTPEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR
Ga0364941_024480_29_358	3300034417	Sediment	MGRSDSTAEGEQMRRFLLLVFVSCTAATVAFSLWPRQLDGYLALFERRTMVNSGVAVTVLALLTLALVALRVRLWRSQRELARARQGLVAVQPAALPYPSSAWGPRPVR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102765

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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