Metagenome / Metatranscriptome Family F102776

Basic Information
Family ID	F102776
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	89 residues
Representative Sequence	VRKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTAEYALFTLVIALANLGYSLAPAGVDGIVNRRHLEAGPALLRRTL
Number of Associated Samples	86
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.98 %
% of genes from short scaffolds (< 2000 bps)	1.98 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Unclassified (98.020 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.723 % of family members)
Environment Ontology (ENVO)	Unclassified (31.683 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (32.673 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.19% β-sheet: 0.00% Coil/Unstructured: 39.81%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13692	Glyco_trans_1_4	31.68
PF00534	Glycos_transf_1	11.88
PF13524	Glyco_trans_1_2	10.89
PF00535	Glycos_transf_2	6.93
PF16901	DAO_C	3.96
PF13440	Polysacc_synt_3	1.98
PF13579	Glyco_trans_4_4	1.98
PF02397	Bac_transf	0.99
PF01266	DAO	0.99
PF01943	Polysacc_synt	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.99

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
All Organisms	root	All Organisms	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
cellular organisms	root	All Organisms → cellular organisms	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.98 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005347\|Ga0070668_102049297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300006904\|Ga0075424_101430047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.27%
Host-Associated	Host-Associated	26.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.38%
Plants	Host-Associated → Plants	26.73%
Aquatic	Environmental → Aquatic	10.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.92%
Sediment	Environmental → Aquatic → Sediment	6.93%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Floodplain	Environmental → Terrestrial → Floodplain	0.99%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.83%
Loam	Environmental → Terrestrial → Soil → Loam	7.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Sand	Environmental → Terrestrial → Soil → Sand	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.99%
Ice	Environmental → Aquatic → Freshwater → Ice	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.99%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.95%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.99%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.99%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.99%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.96%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.98%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.98%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.99%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.99%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.99%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.99%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300005904	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026029	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_112716102	3300000953	Soil	VRRLAQLWRSPTLRTALVYAGSGLGFSGANLILARVLSTDAYALFTLAIALINLAFALGPLGLDGVVNR
JGI10216J12902_1042106742	3300000956	Soil	MVVYALSGVGFAGSNLILARVLPTDQYALFTLVIALGNLGYALAPAGLDGVVNRRHLEAGPRLLAHA
Ga0063356_1003958603	3300004463	Arabidopsis Thaliana Rhizosphere	VNRLWHSPTLRSVAVYGAAGAGFAGANLILARVLPEHEYAVVTLVVALLNIGFFIAPAGLDGVVNRMHLEAGPRLLRRLLPPALATAVLFAAIGAGAYHTTP
Ga0063356_1035586091	3300004463	Arabidopsis Thaliana Rhizosphere	VRRLAQLWRSPTLRTALVYAGSGLGFSGANLILARVLSTDAYALFTLAIALINLAFALGPLGLDGVVNRRHLEAGPRLLQRTLQAS
Ga0063356_1053582772	3300004463	Arabidopsis Thaliana Rhizosphere	VKKLWHSPTLRSVVIYGASGLGFAGANLILARVLPATEYGLFTLVVALVNLSFALAPLGVDGIVNRRQLEAGPRLLQRTLTAAVLVSTAFVIIAEVGYQLSLPLLL
Ga0062595_1003999032	3300004479	Soil	VKGLWYSPTLRSMVVYGASGVGFSGANLILARVLPTEPYALFTLVIALGNLGYSLAPAGLDGVVNRRHLDAGPSLLRLVLRTS
Ga0062591_1013847622	3300004643	Soil	VKGLWYSPTLRSMVVYGASGVGFSGANLILARVLPTEPYALFTLVIALGNLGYSLAPAGLDGVVNRRHLDAGPSLLRLVLRTSTL
Ga0065715_105419641	3300005293	Miscanthus Rhizosphere	VNRLWRSPTLRSVVVYGASGAGFAGANLILARALPTAEYAIFTLVVALVNLGYAAGPAGLDFLVTRRGLPAGPLLLRR
Ga0070668_1020492971	3300005347	Switchgrass Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTGEYALFTLVIALANLGYSLAPAGVDGIVNRRQLEAGPALLRRTLTAAIPRGLIFVVVAELAYQMSPLMLLVLFVSTVAG
Ga0070700_1005208021	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VRTLWRSATLRSAAVLGISGVGFAVANLVLARALPTEEYAVLTLVVALVNVGYPMAAAGVDGMVNRRRLEAGPRLLRRLMQASIPVALA
Ga0070699_1001082511	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VNRLWRSPTLRSVVVYGASGAGFAGANLILARALPTAEYAIFTLVVALVNLGYAAGPAGLDFLVTRRGLPAGPLLLR
Ga0070679_1017765971	3300005530	Corn Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTGEYALFTLVVALANLGYSLAPAGVDGIVNRRQLEAGPALLRRTLTAAIPLGLIFVVVAELAYQMSPLMLLVLFV
Ga0070695_1014463041	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTAEYALFTLVIALANLGYSLAPAGVDGIVNRRQLEAGPALLRRTLTAAIPVG
Ga0070696_1002836192	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKQLWHSPTLRTVVVYGTSGLGFAGANLVLARFLPTAEYAIFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPRLLRRTLGASLLVGVPFVIVAQLGYD
Ga0070704_1018294121	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTAEYALFTLVIALANLGYSLAPAGVDGIVNRRQLEAGPALLRRTLTAAIPVGLIFVVVAELAYQMSPLMLLVLFV
Ga0068861_1007530102	3300005719	Switchgrass Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTGEYALFTLVVALANLGYSLAPAGVDGIVNRRQLEAGPALLRRTLTAAIPLGLIFVVVAELAYQMS
Ga0075287_10198352	3300005873	Rice Paddy Soil	LKRLWHSPTLRSMAVYGASGAGFAGANLVLARALPTEPYALFTLVIALGNLGYSMAPAGLDGVVNRRHLDAGPALLRGVLRTSILVGLAFAAIGLVAY
Ga0075278_10778731	3300005893	Rice Paddy Soil	VRKLWNNATLRTVLIYAVSGLGFTGANLVLARLLPTAEYAVFTLVIALVNLGYSLAPAGVDGIVNRRHLEAGPALLGRTLTATVAVGFLFMLVAELAYR
Ga0075280_101246832	3300005904	Rice Paddy Soil	VKRLWKSPTLRSIVVYGTAGAGFAGANLILARVLPKEEYALFTLVLAIGNLGYSLAPTGVDGIVNRRHLAAGPQLLWRVILAAGTVALIFTAIGLLGY
Ga0075417_103731501	3300006049	Populus Rhizosphere	VRTLWRSATLRSAAVLGISGVGFAVANLVLARALPTEEYAVLTLVVALVNVGYPMAAAGVDGVVNRRRLEAGPRLLRRLM
Ga0075428_1002133083	3300006844	Populus Rhizosphere	VRTLWRSATLRSAAVLGISGVGFAVANLVLARALPTEEYAVLTLVVALVNVGYPMAAAGVDGMVNRRRLEAGPRLLRRLMQASIPVALAFAAIGLAG
Ga0075421_1002593621	3300006845	Populus Rhizosphere	VRRLWRSPTLRSVAALGFSGVGFVVANLMLARSLATTEYALFTLVIALVNLGYPLAPAGVDGVVNRFPVEAGPRLLRRTLWTIVPAGLLFAA
Ga0075433_116797002	3300006852	Populus Rhizosphere	VRVLWQSPTVRSMVVYALSGVGFAGSNLILARALPTEQYALFTLVIALGNLGYALAPAGLDGLVTRRHLE
Ga0075434_1015746642	3300006871	Populus Rhizosphere	VNRLWRSPTLRSVVVYGASGAGFAGANLILARALPTAEYAIFTLVVALVNLGYAAGPAGLDFLVTRRGLPAGPLLLRRVLTAATIVALIFV
Ga0075424_1014300471	3300006904	Populus Rhizosphere	VKKLWYSPTLRSALVYGASGLGFAGANLILARVLPTGEYGLFTLVIALVNLSFALAPLGVDGMVNRRHMDAGPRLLRRTLLAGLIVGAAFVVIAEVAYDMSIPLVLVVFV
Ga0075419_112427681	3300006969	Populus Rhizosphere	VKKLWYSPTLRSVVVYGASGLGFAGANLSLARVLPTAEYGLFTLVIALINLSFALAPAGVDGMVNRHRLDAGPRLLRRTLEAGLIVGVGFVLIAEIGY
Ga0105091_102531491	3300009146	Freshwater Sediment	VYGAAGAGFAGANLILARVLPQAEYAVLTLVVALVNVGFAMAPLGVDGIVNRRHLEAGPRLLRKVLVATTLTAVTFTGIGMALYDV
Ga0105072_11261881	3300009818	Groundwater Sand	VRRLWRSPTIRSVAVLGLSGVGFAVANLVLARVLPTAEYALLTLVVALVNVGYPLAPAGVDGVVNRLPLEAGPRLLRRMLRTIVPAALLFAAIGLAG
Ga0126309_109367931	3300010039	Serpentine Soil	VKAKLKKLWYSPTLRSAFVYGAAGLGFSGANLILSRVLPTEEYAIFTLAIALINLAFALAPLGIDGIVNRRQLDAGPALLRRT
Ga0126308_103137341	3300010040	Serpentine Soil	VRKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTAEYALFTLVIALANLGYSLAPAGVDGIVNRRHLEAGPALLRRTL
Ga0126308_106605151	3300010040	Serpentine Soil	VNKLQKLWHSPTLRSAVVYGASGLGFSGANLILARVLATEDYALFTLVIAIINLAFALAPAGLDGIVNRRHLDAGPRLL
Ga0126312_101187591	3300010041	Serpentine Soil	VVYGASGLGFAGANLILARVLPTEEYGLFTLVIALVNLSFALAPLGVDGMVNRRHMDAGP
Ga0126306_112786001	3300010166	Serpentine Soil	VKVLWQSAMLRTVAIYTASGLGFAGANLVLARVLPASEYGLFTLVIALVNVGFSLATLGLDGVVNRRHVEAGPELLR
Ga0136616_105294951	3300012679	Polar Desert Sand	MRLWRSPTLRTAVVYGAGGVGFTGANLILARVLPATEYGLLTLVVALVNLGYSLAPMGVDGVVNRRHLEAGPQLLRRVLLYSFLVALGFA
Ga0157309_101349252	3300012895	Soil	VKKLWYSPTLRSVVIYGASGLGFTGANLVLARLLPTAEYALFTLVIALANLGYSLAPAGVDGIVNRRQL
Ga0137416_122154482	3300012927	Vadose Zone Soil	VKSLWRSPTLRSVLVYGASGLGFAGANLILARFLPTTEYALFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPKLLGR
Ga0162652_1000799151	3300012941	Soil	VRKLWYSPTLRSAVVYGASGLGFAGANLRLARVLPTGEYALFTLVIALVNLSFALAPLGVDGVVNRRRMDAGPHLLKRTLAAALAVG
Ga0164300_103658572	3300012951	Soil	VKKLWYSPTLRSVVIYGASGLGFAGANLILARVLPATEYGLFTLVVALTNLSFALAPLGVDGIVNRRQLEAGPRLLKRTLTAAALVSTAFVIIAEVGYQL
Ga0164302_111929752	3300012961	Soil	VKKLWYSPTLRSVVIYGASGLGFAGANLILARVLPATEYGLFTLVVALTNLSFALAPLGVDGIVNRRQLEAGPRLLKRTLTAAA
Ga0164304_100139621	3300012986	Soil	VYGAAGLGFSGANLIMAQVLPTAEYGVFTLVIALSNLGSTLAPAGVDGIVQRRSLDAGPELLRRTMAASVAVGVVFTIVAGLAYSITLPMVAIVLTSTIA
Ga0164304_118709491	3300012986	Soil	VRRLEKLWYSPTLRTVLVYGVAGLGFSGSNLILARVLPTAEYAVFTLVVALSNLAYSLAPAGVDGIVNRRQLDMGPQVLRRTLYPAVLVGLAFVAIAA
Ga0157373_110421821	3300013100	Corn Rhizosphere	VKSLWRSPTLRSVVIYGASGLGFAGANLILARVLPTAEYALFTLVIALVNLSYPLAPAGMDGIVNRRHLEAGPNVLKRVLVAGL
Ga0157371_114046152	3300013102	Corn Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTAEYALFTLVIALANLGYSLAPAGVDGIVNRRQLDAGPAL
Ga0075313_10391481	3300014267	Natural And Restored Wetlands	VRTLWRSTTLRSAAVLGLSGVGFAVANLVLARALPTEEYAVVTLVLALVNVGYPMAAAGVDGVVNRRRLEAGPRLLRRLMQASIPVALA
Ga0184605_103340521	3300018027	Groundwater Sediment	MRQLWHSPTLRTVVVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALISLGYSLAPAGVDGIVNRRHLDAGPTLLRRTLGASLLVGVAFVIAAQLGYRLSAPMV
Ga0184605_104632121	3300018027	Groundwater Sediment	VKRLWYSPTLRSMVVYGAAGAGFAGANLILARVLPPVEYGIFTLVTALANLSFSLAPVGLDGIVLRRHIVAGPRLLSRLLLVTTL
Ga0184619_102563012	3300018061	Groundwater Sediment	MRQLWHSPTLRTVVVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPTLLRRTLGASLLVGV
Ga0184637_103496761	3300018063	Groundwater Sediment	VRSLWYSPTLRSVVIYGASGLGFAGANLVLARVLPTAEYALFTLFIALANLSFALAPIGVYGVVQRRHLEAG
Ga0184618_103315632	3300018071	Groundwater Sediment	MRELWRSQTLRTVVVYGTSGLGFAGANLVLARFLPTAEYAVFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPTLLRRTLGASL
Ga0184632_104769782	3300018075	Groundwater Sediment	VTSLWHSPTLRSVVIYGASGLGFAGANLILARVLPTTEYALFTLVIALVNLSFALAPGGVDGMVNRRHLEAGPSLL
Ga0184633_102852612	3300018077	Groundwater Sediment	VRRLWHSPTLRSVVIYGASGLGFAGANLILARVLPTAEYALFTLVIALVNLSFALAPGGVDGMVNRRHLEAGPSVLKRTLGAG
Ga0190265_117432802	3300018422	Soil	VRRLRLSPTIRSAGVYGAAGAGFAAANLILARVLPPAEYALFTLVVALVNVGYALAPAGIDGIVNRRHLEAGPQLLRRVLLVTTA
Ga0190265_122851211	3300018422	Soil	VKKLLLSPTIRSAAVYGAAGAGFALANLILARVLPPAEYALVTLVIALVNVGYALAPAGIDGMVNRQPLEAGPRLLRQVVWATTTTAL
Ga0190274_100111966	3300018476	Soil	VRTLWRSATLRSAAVLGISGVGFAVANLVLARALPTEEYAVLTLVVALVNVGYPMAAAGVDGMVNRRRLEAGPRLLRRLM
Ga0190264_104697971	3300019377	Soil	VRRLWGSPTLRSVAVLGFSGLGFAVANLVLARVLPTEQYALFTLVVALINVGYPLAPAGADGMVNRRALEAGPRLLRRILRPIAPVALV
Ga0193748_10088892	3300019865	Soil	MRQLLRSPTLRTVVVYGTSGLGFAGANLVLARFLPTAEYAVFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPRLLRRTLGASLLVGVAFVIAARLGYDI
Ga0193707_11453661	3300019881	Soil	VAELLSERVRIMRQLWRSPTLRTVAVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALISLGYSLAPAGVDGIVNRRHLDAGPALLRR
Ga0196959_100830422	3300021184	Soil	VRRLWRSATLRSVAVLGLSGVGFAFANLVLARALPTEEYALLTLVVALVNVGYPLAAAGVDGVVNRRQLEAGPRLFRRLLHALVPV
Ga0209342_109356922	3300025326	Soil	MRSLWYSPTLRSGLVYAAAGLGFAGANLILARVLPTSEYGLFTLVIALVNLSSALAPAGIDGMVNRRHLEAGPSLFRRTAMAGAIVGVVFVA
Ga0207706_116316221	3300025933	Corn Rhizosphere	VKSFWRSPTLRSVLVYGASGLGFAGANLILARFLPTTEYALFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPRLLRRTLA
Ga0207661_104219552	3300025944	Corn Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLILARVLPATEYGLFTLVVALTNLSFALAPLGVDGIVNRRQLEAGPRLLKRTLTAAALVSTAFVIIAEVGYQVSLPL
Ga0207640_100860821	3300025981	Corn Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTAEYALFTLVIALANLGYSLAPAGVDGIVNRRQLEAGPALLRRTL
Ga0207640_110705321	3300025981	Corn Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTAEYALFTLVIALANLGYSLAPAGVDGIVNRRQLEAGP
Ga0208002_10046212	3300026029	Natural And Restored Wetlands	VRTLWRSTTLRSAAVLGLSGVGFAVANLVLARALPTEEYAVVTLVLALVNVGYPMAAAGVDGVVNRRRLEAGPRLLRRLMQASIPVALAFLLARDP
Ga0209999_10695311	3300027543	Arabidopsis Thaliana Rhizosphere	VKKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTGEYALFTLVIALANLGYSLAPAGVDGIVNRRQLEAGPALLRRTLTAAIPLGLIFVVVAELAYQMSPL
Ga0209819_101568852	3300027722	Freshwater Sediment	VKRLWRSPTLRSAGVYGAAGAGFAGANLILARVLPQAEYAVLTLVVALVNVGFAMAPLGVDGIVNRRHLEAGPRLLRKVLVATTLTAVTFTSIGVAFYDVSA
Ga0209261_100966592	3300027735	Wetland Sediment	VKRLWLSPTLRSVAVYGASGAGFAGANLILARVLSPDEYAMVTLVVALLNIGFYIAPAGLDGVVNRLHLEAGPRLL
Ga0247818_106434652	3300028589	Soil	VRTLWRSATLRSAAVLGISGVGFAVANLVLARALPTEEYAVLTLVVALVNVGYPMAAAGVDGMVNRRRLEAGPRLLR
Ga0247822_113671041	3300028592	Soil	VKKLWYSPTLRSVVIYGASGLGFAGANLILARVLPATEYGLFTLVVALTNLSFALAPLGVDGIVNRRQLEAGPRLLKRTLTAAALVSTAFV
Ga0307309_100052933	3300028714	Soil	VAELLSERVRIMRQLWRSPTLRTVAVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALISLGYSLAPAGVDGIVNRRHLDAGPALLRRTLGASLLVGVAFVIAARLGYRLS
Ga0307313_101161852	3300028715	Soil	VAELLSERVRIMRQLWRSPTLRTVAVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALISLGYSLAPAGVDGIVNRRHLDAGPALLRRTLGASLLVGV
Ga0307313_102153762	3300028715	Soil	MRQLWHSPTLRTVVVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPRLLRRTLSASLLVGVAFVIAAQL
Ga0307301_101650851	3300028719	Soil	VAELLSERVRIMRQLWRSPTLRTVAVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALISLGYSLAPAGVDGIVNRRHLDAGPALLRRTLGASLLVGVAFVIAA
Ga0307320_102443631	3300028771	Soil	VTSLWHSPTLRSVVIYGSSGLGFAGANLILARVLPTTEYALFTLVIALVNLSFALAPGGVDGMVNRRQLEAGPSLLKRTLGAGLVTGLIFLL
Ga0307282_104223641	3300028784	Soil	MRQLWRSPTLRTVVVYGTSGLGFAGANLVLARFLPTAEYAVFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPRLLRRTLGASLLVGVAFVIAARLGYDISPAMVLILFVSTVA
Ga0307296_100742601	3300028819	Soil	VAELLSERVRIMRQLWRSPTLRTVAVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALISLGYSLAPAGVDGIVNRRHLDAGPALLRRTLGASLLVGVAFVIAARLGYRLSAPMVLILF
Ga0307310_100197651	3300028824	Soil	MVYGLSGLGFSGANLVLARVLPTAEYGLFTLIIALVNLGYALAPVGVDGIVQRRHLDAGPRLLWRTLTASFLVGGIL
Ga0307310_101395752	3300028824	Soil	VRQLWRSPTLRTVVVYGASGLGFAGANLLLARFLPTAEYAVFTLVIALISLGYALAPAGVDGIVNRRHLDAGPALLRRTLGASLLVGVAFV
Ga0307310_106551541	3300028824	Soil	VKRLWYSPTLRSMVVYGAAGAGFAGANLILARVLSEVEYGLFTLVTALVNLACSLGPVGLDGLVLRRQLVAGPRLLSRVLLVTTLVGLAFA
Ga0307312_102897361	3300028828	Soil	MVYGLSGLGFSGANLVLARVLPTAEYGLFTLIIALVNLGYALAPVGVDGIVQRRHLDAGPRLLWRTLTASFLV
Ga0307312_103899412	3300028828	Soil	VTSLWHSPTLRSVVIYGASGLGFAGANLILARVLPTTEYALFTLVIALVNLSFALAPGGVDGMVNRRHLE
Ga0307312_105452612	3300028828	Soil	MRQLWHSPTLRTVVVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPRLLRRTLSASLLVGVAFVIAA
Ga0307289_101096992	3300028875	Soil	VAELLSERVRIMRQLWRSPTLRTVAVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALISLGYSLAPAGVDGIVNRRHLDAGPALLRRT
Ga0299907_100729623	3300030006	Soil	VRKVFLSPTIRTAVVYGSAGAGFALANLILARVLPPAQYALVTLVIALVNVGYALAPAGIDGMVNRQGLEAGPRLLRQVLWATTATGLAFALIGRLAYD
Ga0308189_101197311	3300031058	Soil	VAELLSERVRIMRQLWRSPTLRTVAVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALISLGYSLAPAGVDGIVNRRHLDAGPTLLRRTLGASLLVGVAFVIAAQL
Ga0308199_10031201	3300031094	Soil	VAELLSERVRIMRQLWRSPTLRTVAVYGASGVGFAGANLLLARFLPTAEYAVFTLVIALISLGYSLAPAGVDGIVNRRHLDAGPALLRRTL
Ga0307413_110982082	3300031824	Rhizosphere	VRKLWYNPTLRSVVIYAASGLGFAGANLLLARLLPTAEYAVFTLVIALANLGYSLAPAGVDGIVNRRHLEAGPALLRRTL
Ga0310900_114037682	3300031908	Soil	VRTLWRSATLRSAAVLGISGVGFAVANLVLARALPTEEYAVLTLVVALVNVGYPMAAAGVDGMVNRRRLEAGPRLLRRLMQASIPVALAFAAIGLAGYE
Ga0307412_113364112	3300031911	Rhizosphere	MLRTVAIYTASGLGFAGANLILARVLPAVEYGLFTLVIALVNLGFSLATLGLDGVVNRRHLEAGPDLL
Ga0307409_1000850991	3300031995	Rhizosphere	VKKLWYSPTLRSVFVYGVSGLGFAGANLMLARLLPTTEYALFTLVLALANLGYSLAPAGVDGIVNRRLLDAGPRLLRRTLFASLPVGVI
Ga0307409_1016572371	3300031995	Rhizosphere	VRKLWYSPTLRSVVIYGASGLGFAGANLVLARLLPTAEYALFTLVIALANLGYSLAPAGVDGIVNRRHLEAGPALLRRT
Ga0308176_109761612	3300031996	Soil	VKGLWYSPTLRSMVVYGASGVGFSGANLILARVLPTEPYALFTLVIALGNLGYSLAPAGLDGVVNRRHLDAGPSLLRLV
Ga0307416_1002788891	3300032002	Rhizosphere	MLRTVAIYTASGLGFAGANLILARVLPAVEYGLFTLVIALVNLGFSLATLGLDGVVNRRHLEAG
Ga0307416_1008274092	3300032002	Rhizosphere	MLRTVAIYTASGFGFAGANLILARVLPAVEYGLFTLVIALVNVGFSLATLGLDGVVNRRHLEAGPELLRRSAGAALIVG
Ga0307416_1011700401	3300032002	Rhizosphere	VKRLWRSATLRSVAVLGLSGVGFAVANLLLARALPTEEYAVLTLVVALVNVGYPLAAAGLDGVVNRRRLEAGPRLFRRLLQA
Ga0307411_108590782	3300032005	Rhizosphere	MLRTVAIYTASGLGFAGANLILARVLPAVEYGLFTLVIALVNLGFSVATLGLDGVVNRRQLAAGHKLLRRSVGAALIVGLG
Ga0307471_1038267181	3300032180	Hardwood Forest Soil	MKQLWHSPTLRTVVVYGTSGLGFAGANLVLARFLPTAEYAIFTLVIALANLGYSLAPAGVDGIVNRRHLDAGPRLLRRTLGASLLVGVPFVIVAQLGYDISAKMAL
Ga0310896_105461112	3300032211	Soil	VKKLWYSPTLRSVVIYGASGLGFAGANLILARVLPATEYGLFTLVVALTNLSFALAPLGVDGIVNRRQLEAGPRLLKRTLTAAALVSTAFVIIAEVGYQ
Ga0214471_114859391	3300033417	Soil	VRRLWRSPTLRSVAALGLSGVGFAVANLMLARALTTTEYALFTLVVALVNVGYPLAPAGVDGVVNRLPLEAGPRLLRRMLR
Ga0316624_119319361	3300033486	Soil	VKGLWQSPTLRSAVVYALSGIGFAGANLILARVLPTEQYAIFTLLIALINLGYSLAPMGIDGVVNRHRLEAGPALLRSALRPAVAIGLIFAA
Ga0364946_140266_2_295	3300033815	Sediment	VRRLWLSPTIRSAAVYAAAGAGFAAANLILARVLPPVEYALVTLVVALVNVGFALAPAGIDGIVNRRDLEAGPRLLRRVMFATTATGLVFALVGALAY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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