Metagenome / Metatranscriptome Family F102779

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102779
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	62 residues
Representative Sequence	MKMVRFSGIKFATGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVHFQTAGIDTVSGHR
Number of Associated Samples	87
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	26.73 %
% of genes near scaffold ends (potentially truncated)	28.71 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.396 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.733 % of family members)
Environment Ontology (ENVO)	Unclassified (24.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.624 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.03% β-sheet: 26.23% Coil/Unstructured: 55.74%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13565	HTH_32	2.97
PF14690	zf-ISL3	1.98
PF04392	ABC_sub_bind	1.98
PF03050	DDE_Tnp_IS66	1.98
PF12759	HTH_Tnp_IS1	1.98
PF13359	DDE_Tnp_4	0.99
PF08546	ApbA_C	0.99
PF10546	P63C	0.99
PF14319	Zn_Tnp_IS91	0.99
PF16277	DUF4926	0.99
PF00011	HSP20	0.99
PF01609	DDE_Tnp_1	0.99
PF02371	Transposase_20	0.99
PF01471	PG_binding_1	0.99
PF00296	Bac_luciferase	0.99
PF09350	DJC28_CD	0.99
PF13751	DDE_Tnp_1_6	0.99
PF13823	ADH_N_assoc	0.99
PF07311	Dodecin	0.99
PF13365	Trypsin_2	0.99
PF05685	Uma2	0.99
PF01230	HIT	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.98
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.98
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.99
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.99
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.99
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.99
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.99
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.99
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.99
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.99
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.99
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.99
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
All Organisms	root	All Organisms	39.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
cellular organisms	root	All Organisms → cellular organisms	39.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.97 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	2.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.98 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	2.97 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.98 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.99 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.99 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	2.97 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.99 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.99 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.99 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.99 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.99 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.99 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.99 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.99 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.99 %
unclassified Planctomycetia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia	0.99 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.99 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %
Planctomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium	0.99 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.99 %
Candidatus Yanofskybacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria	0.99 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.99 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Candidatus Yanofskybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_46_23	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria → Candidatus Yanofskybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_46_23	0.99 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.99 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.99 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %
Planctomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium	0.99 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.99 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
unclassified Aquisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera	0.99 %
Candidatus Yanofskybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_46_23	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria → Candidatus Yanofskybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_46_23	0.99 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.99 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %
Planctomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium	0.99 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.99 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.40 %
Aquisphaera sp. JC669	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	0.99 %
Candidatus Yanofskybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_46_23	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria → Candidatus Yanofskybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_46_23	0.99 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.99 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.99 %
Planctomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium	0.99 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.99 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.99 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.99 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005187\|Ga0066675_10374145	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium	1047	Open in IMG/M
3300005332\|Ga0066388_101042460	Not Available	1376	Open in IMG/M
3300005332\|Ga0066388_103334752	Not Available	820	Open in IMG/M
3300005446\|Ga0066686_10995695	Not Available	545	Open in IMG/M
3300005471\|Ga0070698_101584907	Not Available	607	Open in IMG/M
3300005556\|Ga0066707_10758593	Not Available	603	Open in IMG/M
3300005576\|Ga0066708_10908955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300005713\|Ga0066905_101577832	Not Available	600	Open in IMG/M
3300005764\|Ga0066903_105065117	Not Available	698	Open in IMG/M
3300006844\|Ga0075428_100133495	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300006853\|Ga0075420_101164215	Not Available	663	Open in IMG/M
3300006969\|Ga0075419_11468010	Not Available	511	Open in IMG/M
3300007255\|Ga0099791_10174438	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300007258\|Ga0099793_10222914	Not Available	907	Open in IMG/M
3300007265\|Ga0099794_10268931	Not Available	880	Open in IMG/M
3300009012\|Ga0066710_102327324	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Yanofskybacteria → Candidatus Yanofskybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_46_23	778	Open in IMG/M
3300009089\|Ga0099828_10857685	Not Available	812	Open in IMG/M
3300009090\|Ga0099827_10136399	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300009090\|Ga0099827_10151688	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300009090\|Ga0099827_11067854	Not Available	701	Open in IMG/M
3300009147\|Ga0114129_10761590	Not Available	1238	Open in IMG/M
3300009162\|Ga0075423_12578069	Not Available	555	Open in IMG/M
3300009691\|Ga0114944_1114940	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	1036	Open in IMG/M
3300009691\|Ga0114944_1516429	Not Available	509	Open in IMG/M
3300009792\|Ga0126374_10247052	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300009807\|Ga0105061_1085918	Not Available	532	Open in IMG/M
3300009822\|Ga0105066_1142633	Not Available	547	Open in IMG/M
3300010043\|Ga0126380_12191311	Not Available	511	Open in IMG/M
3300010047\|Ga0126382_10738935	Not Available	831	Open in IMG/M
3300010132\|Ga0127455_1020707	Not Available	1160	Open in IMG/M
3300010333\|Ga0134080_10066207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1443	Open in IMG/M
3300010336\|Ga0134071_10363028	Not Available	733	Open in IMG/M
3300010360\|Ga0126372_11497879	Not Available	710	Open in IMG/M
3300010362\|Ga0126377_12605572	Not Available	581	Open in IMG/M
3300010398\|Ga0126383_12891131	Not Available	561	Open in IMG/M
3300012096\|Ga0137389_11728476	Not Available	522	Open in IMG/M
3300012205\|Ga0137362_10077896	All Organisms → cellular organisms → Bacteria	2758	Open in IMG/M
3300012205\|Ga0137362_10219833	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300012206\|Ga0137380_10090011	All Organisms → cellular organisms → Bacteria	2804	Open in IMG/M
3300012206\|Ga0137380_10242648	Not Available	1625	Open in IMG/M
3300012207\|Ga0137381_11410495	Not Available	589	Open in IMG/M
3300012209\|Ga0137379_10169637	Not Available	2094	Open in IMG/M
3300012350\|Ga0137372_10310930	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1218	Open in IMG/M
3300012351\|Ga0137386_11083040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	566	Open in IMG/M
3300012359\|Ga0137385_10130051	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300012359\|Ga0137385_10181023	Not Available	1846	Open in IMG/M
3300012359\|Ga0137385_10370738	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300012359\|Ga0137385_11615115	Not Available	512	Open in IMG/M
3300012917\|Ga0137395_11021716	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012925\|Ga0137419_11688389	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	540	Open in IMG/M
3300012948\|Ga0126375_10986623	Not Available	684	Open in IMG/M
3300012971\|Ga0126369_10060553	All Organisms → cellular organisms → Bacteria	3278	Open in IMG/M
3300012972\|Ga0134077_10338143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300012977\|Ga0134087_10160376	Not Available	985	Open in IMG/M
3300015241\|Ga0137418_10452513	Not Available	1037	Open in IMG/M
3300015359\|Ga0134085_10056722	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300015371\|Ga0132258_12168063	Not Available	1396	Open in IMG/M
3300015373\|Ga0132257_101876746	Not Available	771	Open in IMG/M
3300016319\|Ga0182033_10994853	Not Available	746	Open in IMG/M
3300016319\|Ga0182033_11606885	Not Available	588	Open in IMG/M
3300016341\|Ga0182035_11350006	Not Available	639	Open in IMG/M
3300016357\|Ga0182032_11772837	Not Available	539	Open in IMG/M
3300016387\|Ga0182040_11426338	Not Available	587	Open in IMG/M
3300016404\|Ga0182037_10395451	Not Available	1137	Open in IMG/M
3300016422\|Ga0182039_12070195	Not Available	524	Open in IMG/M
3300017654\|Ga0134069_1135879	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300018028\|Ga0184608_10107091	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300018063\|Ga0184637_10063455	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300018067\|Ga0184611_1331640	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300018076\|Ga0184609_10365923	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	672	Open in IMG/M
3300018431\|Ga0066655_11003573	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300018468\|Ga0066662_11340380	Not Available	736	Open in IMG/M
3300019257\|Ga0180115_1189443	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300020084\|Ga0194110_10345003	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300020197\|Ga0194128_10401352	Not Available	652	Open in IMG/M
3300022195\|Ga0222625_1708678	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300022563\|Ga0212128_10048999	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300022563\|Ga0212128_10847933	Not Available	541	Open in IMG/M
3300025324\|Ga0209640_10312594	Not Available	1311	Open in IMG/M
3300025910\|Ga0207684_10167828	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300026313\|Ga0209761_1295756	Not Available	567	Open in IMG/M
3300027056\|Ga0209879_1072417	Not Available	545	Open in IMG/M
3300027163\|Ga0209878_1015140	Not Available	1059	Open in IMG/M
3300027655\|Ga0209388_1104491	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300027873\|Ga0209814_10389103	Not Available	612	Open in IMG/M
3300027874\|Ga0209465_10588784	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300027882\|Ga0209590_10124686	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300027882\|Ga0209590_10227498	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300027882\|Ga0209590_10700678	Not Available	648	Open in IMG/M
3300027909\|Ga0209382_10261149	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300030830\|Ga0308205_1009191	Not Available	980	Open in IMG/M
3300031081\|Ga0308185_1049292	Not Available	540	Open in IMG/M
3300031421\|Ga0308194_10326995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300031573\|Ga0310915_11045484	Not Available	569	Open in IMG/M
3300031573\|Ga0310915_11244860	Not Available	514	Open in IMG/M
3300031770\|Ga0318521_11005284	Not Available	511	Open in IMG/M
3300031912\|Ga0306921_11093285	Not Available	894	Open in IMG/M
3300032059\|Ga0318533_11308861	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300032091\|Ga0318577_10344105	Not Available	713	Open in IMG/M
3300032180\|Ga0307471_101678600	Not Available	790	Open in IMG/M
3300034681\|Ga0370546_019879	Not Available	882	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.09%
Host-Associated	Host-Associated	8.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.21%
Aquatic	Environmental → Aquatic	11.88%
Plants	Host-Associated → Plants	8.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.93%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.96%
Sediment	Environmental → Aquatic → Sediment	3.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.33%
Loam	Environmental → Terrestrial → Soil → Loam	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.96%
Sand	Environmental → Terrestrial → Soil → Sand	3.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Lake	Environmental → Aquatic → Freshwater → Lake	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.95%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.95%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	3.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066675_103741452	3300005187	Soil	MGKMKMVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSGHR*
Ga0066388_1010424603	3300005332	Tropical Forest Soil	MWLISSIKFAVCLAEETRNPLPSHEIRRKRTKRKIFFLDAKKKIAHFQIAAIDAFSGHR*
Ga0066388_1033347522	3300005332	Tropical Forest Soil	MKLVRFSGIKFAAGLAYETLNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIASIDTVSGHR*
Ga0066686_109956951	3300005446	Soil	MKMVRFSGIKFATGLAYETHNPPPPHEIRRKRIRRQIFSMDAKKKIVHFHTAGINTVSGHR*
Ga0070698_1015849072	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKMVRFSGIKFAVGLAYETHNPLPSHEIRRKRIRKQIFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0066707_107585932	3300005556	Soil	MGKMKIVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSGHR*
Ga0066708_109089552	3300005576	Soil	MVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSGHR*
Ga0066905_1015778322	3300005713	Tropical Forest Soil	MKMWHFSGTKFAAGLAEETCNPLPLHEIQRKRTRRQNFSLDAKKKITHFQTADINTVSGRR*
Ga0066903_1050651172	3300005764	Tropical Forest Soil	MGKMKMVRFSGIKFAAGLAYETLNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIAGFDAVSGHC*
Ga0075428_1001334954	3300006844	Populus Rhizosphere	MKMVRFSGIKFAVGLTYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0075420_1011642152	3300006853	Populus Rhizosphere	FSGIKFAVGLTYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0075419_114680101	3300006969	Populus Rhizosphere	KMKMVRFSGIKFAVGLTYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0099791_101744381	3300007255	Vadose Zone Soil	MKMVRFSGIKFATGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKLVHFQTAGIDTVSGHR*
Ga0099793_102229142	3300007258	Vadose Zone Soil	MKMVRFSGIKFATGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVPFQTAGIDTVSGHR*
Ga0099794_102689312	3300007265	Vadose Zone Soil	MKMVRFSGIKFATGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0066710_1023273241	3300009012	Grasslands Soil	MGKMKMVRLSGIKFAMGLAYESHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSG
Ga0099828_108576852	3300009089	Vadose Zone Soil	MKMVRFSGIKFAAGLACETRNPLPSHEIRRKRIRRQIFSTDAKKKTVHFQTADIDTVSGHR*
Ga0099827_101363991	3300009090	Vadose Zone Soil	FAAGLAYETHNPLPSHEIRRKRIGRQIFSTDAKKKIVQFQIVGIDTVSGHR*
Ga0099827_101516882	3300009090	Vadose Zone Soil	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRKQIFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0099827_110678542	3300009090	Vadose Zone Soil	MKVVHFSGIKFAAGLAYETHNPLPSHEIRRKRIGRQIFSTNAKKKIIHFQIAGIDTVSGHR*
Ga0114129_107615902	3300009147	Populus Rhizosphere	MVRFSGIKFAAGLAYEIHNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIAGIDTVSGHR*
Ga0075423_125780691	3300009162	Populus Rhizosphere	MKMVRFSGIKFAVGLTYETHNPLPSHEIRRKRIRRQNFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0114944_11149402	3300009691	Thermal Springs	MKMGHFSGIKFAMGLAYETHNPFPSHEIRSKRIRKHICSTDAKKKIVHFQIAGIDTVSGHR*
Ga0114944_15164292	3300009691	Thermal Springs	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRKQIFSTDAKKKIVHFQTAGIDTVSCHR*
Ga0126374_102470521	3300009792	Tropical Forest Soil	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIAGIDAVLGRR*
Ga0105061_10859182	3300009807	Groundwater Sand	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKTVHFQTAGIDTVSGHR*
Ga0105066_11426331	3300009822	Groundwater Sand	KMKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKTVHFQTAGIDTVSGHR*
Ga0126380_121913111	3300010043	Tropical Forest Soil	MSATAWKRIKTGKMKMVRFSGIKFAAGLAYETHNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIASIDTVSGHR*
Ga0126382_107389351	3300010047	Tropical Forest Soil	MKMVRFSGIKFAAGLAYETLNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIAGIDAVLGRR*
Ga0127455_10207072	3300010132	Grasslands Soil	MGKMKMVRFSGIKFAAGLAYETHNPFPSHEIRRKRIRRQIFSTDAKKTIVHFQTAGIDTVSGRR*
Ga0134080_100662072	3300010333	Grasslands Soil	MGKMKMVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQICSTDAKKKIVRFQTAGIDTVSGHR*
Ga0134071_103630282	3300010336	Grasslands Soil	MGKMKMVRFSGIKFATGLAYETHNPPPPHEIRRKRIRRQIFSMDAKKKIVHFHTAGINTVSGHR*
Ga0126372_114978792	3300010360	Tropical Forest Soil	SATAWKRTKTGKMKMVHFSGIKFAAGLAYETHNPIPSHEIRRTRIRRQIFATDAKKKIVPFQIAGIDTVSGHR*
Ga0126377_126055721	3300010362	Tropical Forest Soil	MKMVRFSSIKFTAGLAYETLNPLPSHEIRRTRIRRQIFSMDAKKKIVHFQIAGIDTVSGHR*
Ga0126383_128911311	3300010398	Tropical Forest Soil	MSATAWKRTKTGKMKLVRFSGIKFAAGLAYETLNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIAGINAVLGRR*
Ga0137389_117284762	3300012096	Vadose Zone Soil	MKMVRFSGIKFATGLAYETHNPLPSHEIRRKRIRRQNFSTDAKKKIVHFQIVGIDTVSGHR*
Ga0137362_100778966	3300012205	Vadose Zone Soil	MKMVRFSGIKFATGLAYETHNPLPSHEIRRKRIRRQNFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0137362_102198332	3300012205	Vadose Zone Soil	MGKMKMVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIAHFQTAGIDTVSGHR*
Ga0137380_100900113	3300012206	Vadose Zone Soil	MKMVRFSGIKFAVSLAYETHNPLPSHEIRRKRIRRQIFSTDAEKKIVHFQTAGIDTVSGHR*
Ga0137380_102426483	3300012206	Vadose Zone Soil	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIGRQIFSTDAKKKIVQFQIVGIDTVSGHR*
Ga0137381_114104952	3300012207	Vadose Zone Soil	VSATAWKCTKTGKVKMARFSGIKFAKGLAYGTHNPLPSHEIRRKRARRQICYTDAKKKIAHFQTAGIHTVSGHR*
Ga0137379_101696375	3300012209	Vadose Zone Soil	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIGRQIFSTDAKKKIVHFQIVGIDTVSGHR*
Ga0137372_103109302	3300012350	Vadose Zone Soil	KCTKMGKMKMVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSGHR*
Ga0137386_110830403	3300012351	Vadose Zone Soil	SATAWKCTKTGKVKMARFSGIKFAKGLAYGTHNPLPSHEIRRKRARRQICYTDAKKKIAHFQTAGIDTVSGHR*
Ga0137385_101300514	3300012359	Vadose Zone Soil	MGKMKMVRFSGIKFAIDIAYETHNTLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSGHR*
Ga0137385_101810231	3300012359	Vadose Zone Soil	MKRVRFSGIKFAAGLAYETHNPLPSHEIRRKRIGRQIFSTDAKKKIVQFQIVGIDTVSGHR*
Ga0137385_103707381	3300012359	Vadose Zone Soil	IKFAVSLAYETHNPLPSHEIRRKRIRRQIFSTDAEKKIVHFQTAGIDTVSGHR*
Ga0137385_116151152	3300012359	Vadose Zone Soil	MGKMKMVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGID
Ga0137395_110217162	3300012917	Vadose Zone Soil	MKMVHFSGIKFAAGLAYETHNPLPSHEIRRKRIGRQIFSTNAKKKIIYFQIAGIDTVSGHR*
Ga0137419_116883892	3300012925	Vadose Zone Soil	GIKFAAGLAYETHNPLPSHEIRRKRIRRQNFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0126375_109866232	3300012948	Tropical Forest Soil	MKMVRFSGTKFAAGLAYETLNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIASIDTVSGHR*
Ga0126369_100605532	3300012971	Tropical Forest Soil	VWKRTKTGKTKMVRFSGIKFAAGLAYETHNPIPSHEIRRTRIRRQIFATDAKKKIVPFQIAGIDTVSGHR*
Ga0134077_103381431	3300012972	Grasslands Soil	MGKMKMVRFSGIKFAMGLAYETHNPLSSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSGHR*
Ga0134087_101603762	3300012977	Grasslands Soil	MGKMKMVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTASGHR*
Ga0137418_104525132	3300015241	Vadose Zone Soil	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRRQNFSTDAKKKIVHFQTAGIDTVSGHR*
Ga0134085_100567222	3300015359	Grasslands Soil	MKMVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSGHR*
Ga0132258_121680631	3300015371	Arabidopsis Rhizosphere	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRRQLFSTDAKKKTVHFQTAGIDTVSGHR*
Ga0132257_1018767462	3300015373	Arabidopsis Rhizosphere	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRRQKFSTDAKKKTVHFQTAGIDTVSGHR*
Ga0182033_109948531	3300016319	Soil	IKTGKMKMVRFSGIKFAAGLAYETLNPLPSHEIRRTWIRRQIFSTDAKKKIVHFQIAGIDAVLGRR
Ga0182033_116068851	3300016319	Soil	MGKMKMVRFSGIKFAAGLAYETLNPLPSHEIRRTRIRRQFFSTDAKKKIVHFQIAGIDAVLGRR
Ga0182035_113500061	3300016341	Soil	MKMVRFSGIKFAAGLADETHNPLLPHEIRRTRIRKQIFSTDAKKKIVHFQIAGIDAVLGR
Ga0182032_117728372	3300016357	Soil	GKMKMVRFSGIKFAAGLAYETHNLLPSHEIRRTRIRRQIFSTDAKKKIVHFQIAGIDAVLGRR
Ga0182040_114263381	3300016387	Soil	KRIKTGKMKMVRFSGIKFAAGLAYETLNPLPSHEIRRTWIRRQIFSMDAKKKIVHFQIAGIDAVLGRR
Ga0182037_103954513	3300016404	Soil	MKMVRFSGIKFAAGLAHETLNLLPSHEIRRTRIRRQIFSMDAKKKIVHFQIAGIDAVLGR
Ga0182039_120701951	3300016422	Soil	MKMVRFSGIKFAAGLAYETHNLLPSHEIRRTRIRRQIFATDAKKKIVPFQIAGIDTVSGH
Ga0134069_11358792	3300017654	Grasslands Soil	MGKMKMVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSGHR
Ga0184608_101070911	3300018028	Groundwater Sediment	MKMVHFSGIKFAAGLAYETHNPLPSHEIRRKRIGRQIFSTNAKKKIIYFQIAGIDTVSGH
Ga0184637_100634552	3300018063	Groundwater Sediment	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIIHFQTAGIDTVSGH
Ga0184611_13316401	3300018067	Groundwater Sediment	MWLFSSIKFAVGLAEETHNPLPSHEIQRKRTKRKIFSLDAKKKIAHFQIAAIDAVSGHR
Ga0184609_103659231	3300018076	Groundwater Sediment	MKMVRFSGIKFATGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKQTVHF
Ga0066655_110035732	3300018431	Grasslands Soil	MVRFSGIKFAMGLAYETHNPLPSHEIRRKRIGRQIFSTDAKKKIVHFQIVGIDTVSGHR
Ga0066662_113403801	3300018468	Grasslands Soil	KTGKMKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIGRQIFSTDAKKKIVQFQIVGIDTVSGHR
Ga0180115_11894432	3300019257	Groundwater Sediment	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIAGIDTVSGH
Ga0194110_103450032	3300020084	Freshwater Lake	MKMWHFSGTKFAAGLAYETQNFLLWHEIRRKRTRMHFFSLDAKKKITHFHTAGLTTVSGR
Ga0194128_104013522	3300020197	Freshwater Lake	MSATAWKCTKTGKMKMWHFSGTKFAAGLAYETQNFLLWHEIRRKRTRMHFFSLDAKKKITHFHTAGLTTVSGRR
Ga0222625_17086782	3300022195	Groundwater Sediment	MKMVHFSGIKFAAGLAYETHNPLPSHETRRKRIGRQIFSTNAKKKIIYFQIAGID
Ga0212128_100489991	3300022563	Thermal Springs	MKMGHFSGIKFAMGLAYETHNPFPSHEIRSKRIRKHICSTDAKKKIVHFQIAGIDTVSGH
Ga0212128_108479332	3300022563	Thermal Springs	MKMVHFSGIKFAMGLAYETHNPFPSHEIRSKRIRKHIFSTDAKKKIVHFQIAGIDTVSGH
Ga0209640_103125942	3300025324	Soil	MKMVHFSGIKFAMGLAYETHNPLPSHEIRRKRIRKQIFSTDAKKKIVHFQIAGIDTDSGH
Ga0207684_101678281	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KMWHFPGIKFAAGLAEETHNPLPSHEIRRKRTRRQNFSLDAKKKITHFHTAGINTVSGHR
Ga0209761_12957561	3300026313	Grasslands Soil	MSATAWKCTKMGKMKMVRFSGIKFAVGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVRFQTAGIDTVSGHR
Ga0209879_10724172	3300027056	Groundwater Sand	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKTVHFQTAGIDTVSGH
Ga0209878_10151402	3300027163	Groundwater Sand	MKMVRFSGIKFAAGLAYETHNPLSSHEIRRTRIRRQIFSTDAKKKIVHFQIAGIDTVSGH
Ga0209388_11044912	3300027655	Vadose Zone Soil	MVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIAHFQTAGIDTVSGHR
Ga0209814_103891031	3300027873	Populus Rhizosphere	MKMVRFSGIKFAAGLAYEIHNPLPSHEIRRTRIRRQIFSTDAKKKIVHFQIAGIDTVSGH
Ga0209465_105887842	3300027874	Tropical Forest Soil	MKMVRFSGIKIAAGLAYEIHNPSPSHEIRRTRIRRQIFSTDAKKKIVHFQIASIDTVLGH
Ga0209590_101246862	3300027882	Vadose Zone Soil	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIRKQIFSTDAKKKIVHFQTAGIDTVSGH
Ga0209590_102274982	3300027882	Vadose Zone Soil	MKMVRFSGIKFAAGLAYETHNPLPSHEIRRKRIGRQIFSTDAKKKIVQFQIVGIDTVSGH
Ga0209590_107006781	3300027882	Vadose Zone Soil	MKVVHFSGIKFAAGLAYETHNPLPSHEIRRKRIGRQIFSTNAKKKIIHFQIAGIDTVSGH
Ga0209382_102611492	3300027909	Populus Rhizosphere	MKMVRFSGIKFAVGLTYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVHFQTAGIDTVSGH
Ga0308205_10091912	3300030830	Soil	MGKMKMVRFSGIKFAMGLAYETHNPLPSHEIRRKRIRRQIFSTDAKKKIVHFQTAGIDTVSGHR
Ga0308185_10492921	3300031081	Soil	KMKMVRFSGIKFATGLAYETHNPLPSHEIRRKRIRRQNFSTDAKKKIVHFQTAGIDTVSGHR
Ga0308194_103269951	3300031421	Soil	MKMVHFSGIKFAMGLASETHNPLPSHEIRRKRIRRQIFSTDAKKKIVHFQTAGIDTVSGH
Ga0310915_110454841	3300031573	Soil	TVWKRTKTGKTKMVRFSGIKFAAGLAYETHNPIPSHEIRRTRIRRQIFATDAKKKIVPFQIAGIDTVSGHR
Ga0310915_112448601	3300031573	Soil	KRIKMGKMKMVRFSGIKFAAGLAYETLNPLPSHEIRRTRIRRQFFSTDAKKKIVHFQIAGIDAVLGRR
Ga0318521_110052842	3300031770	Soil	IFILPILKRIKMGKMKMVRFSGIKFAAGLAYETLNPLPSHEIRRTRIRRQFFSTDAKKKIVHFQIAGIDAVLGRR
Ga0306921_110932851	3300031912	Soil	MKMVRFSGIKFAAGLAYETHNPLPSYEIRRTRIRKQIFSTDAKKKIVHFQIAGIDAVLGR
Ga0318533_113088612	3300032059	Soil	TKTGKMKMVRFSGIKFAAGLADETHNPLLPHEIRRTRIRRQIFSTDAKKKIVPFQIAGIDTVSGHR
Ga0318577_103441051	3300032091	Soil	VSATAWKRTKTGKMKMVRFSGIKFAAGLAYETHNPLPSYEIRRTRIRKQIFSTDAKKKIVHF
Ga0307471_1016786002	3300032180	Hardwood Forest Soil	MKMWHFPGIKFAAGLAEETHNPLPSHEIRRKRTRRQIFSLDAKKKITHFHTAGINTVSGR
Ga0370546_019879_556_741	3300034681	Soil	MKMVHFSGIKFAMGLASETHNPLPSHEIRRKRIRRQNFSTDAKKKIVHFQTAGIDTVSGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102779

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences