Metagenome Family F102879

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102879
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	82 residues
Representative Sequence	LTIRELIAEQRRRLASVNPAERLAAALLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPPKGELTR
Number of Associated Samples	76
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.28 %
% of genes near scaffold ends (potentially truncated)	33.66 %
% of genes from short scaffolds (< 2000 bps)	85.15 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.089 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (13.861 % of family members)
Environment Ontology (ENVO)	Unclassified (22.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.475 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.26% β-sheet: 0.00% Coil/Unstructured: 41.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00239	Resolvase	63.37
PF02146	SIR2	2.97
PF13384	HTH_23	1.98
PF08706	D5_N	0.99
PF13518	HTH_28	0.99
PF14559	TPR_19	0.99
PF13193	AMP-binding_C	0.99
PF00216	Bac_DNA_binding	0.99
PF14534	DUF4440	0.99
PF07693	KAP_NTPase	0.99
PF14329	DUF4386	0.99
PF12161	HsdM_N	0.99
PF13649	Methyltransf_25	0.99
PF00144	Beta-lactamase	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	63.37
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	63.37
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	2.97
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.99
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.99
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.99
COG4928	Predicted P-loop ATPase, KAP-like	General function prediction only [R]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.09 %
Unclassified	root	N/A	8.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.09 %
Unclassified	root	N/A	8.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.09 %
Unclassified	root	N/A	8.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.21 %
Unclassified	root	N/A	8.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.97 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.80 %
Unclassified	root	N/A	8.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.94 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.80 %
Unclassified	root	N/A	8.91 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.80 %
Unclassified	root	N/A	8.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.94 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.80 %
Unclassified	root	N/A	8.91 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.98 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.99 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.99 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.80 %
Unclassified	root	N/A	8.91 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1.98 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.98 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.99 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.99 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004156\|Ga0062589_102384781	Not Available	545	Open in IMG/M
3300004633\|Ga0066395_10934225	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300005181\|Ga0066678_10349610	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005186\|Ga0066676_10261810	All Organisms → cellular organisms → Bacteria → Acidobacteria	1133	Open in IMG/M
3300005332\|Ga0066388_103082288	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300005434\|Ga0070709_10185975	All Organisms → cellular organisms → Bacteria → Acidobacteria	1462	Open in IMG/M
3300005534\|Ga0070735_10000751	All Organisms → cellular organisms → Bacteria	33235	Open in IMG/M
3300005541\|Ga0070733_10340679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	994	Open in IMG/M
3300005557\|Ga0066704_10643644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300005557\|Ga0066704_10961722	Not Available	527	Open in IMG/M
3300005575\|Ga0066702_10405126	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300005587\|Ga0066654_10341440	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300005591\|Ga0070761_10716717	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300005764\|Ga0066903_103422538	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300006800\|Ga0066660_10255107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1374	Open in IMG/M
3300006893\|Ga0073928_10889821	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300007982\|Ga0102924_1039420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2947	Open in IMG/M
3300009547\|Ga0116136_1045793	All Organisms → cellular organisms → Bacteria → Acidobacteria	1250	Open in IMG/M
3300009632\|Ga0116102_1195133	Not Available	545	Open in IMG/M
3300009637\|Ga0116118_1003299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	7431	Open in IMG/M
3300009640\|Ga0116126_1048086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1687	Open in IMG/M
3300010341\|Ga0074045_10470847	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300010361\|Ga0126378_12255215	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300010376\|Ga0126381_100203907	All Organisms → cellular organisms → Bacteria → Acidobacteria	2646	Open in IMG/M
3300010376\|Ga0126381_102090409	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300010376\|Ga0126381_104103715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	566	Open in IMG/M
3300010379\|Ga0136449_102273500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300010379\|Ga0136449_103203354	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300010379\|Ga0136449_103557214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300012209\|Ga0137379_11779502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300014489\|Ga0182018_10134710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1421	Open in IMG/M
3300014495\|Ga0182015_10301407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1048	Open in IMG/M
3300014501\|Ga0182024_10467978	All Organisms → cellular organisms → Bacteria → Acidobacteria	1611	Open in IMG/M
3300017925\|Ga0187856_1004282	All Organisms → cellular organisms → Bacteria	9553	Open in IMG/M
3300017925\|Ga0187856_1080864	All Organisms → cellular organisms → Bacteria → Acidobacteria	1332	Open in IMG/M
3300017925\|Ga0187856_1203380	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300017928\|Ga0187806_1317803	Not Available	552	Open in IMG/M
3300017942\|Ga0187808_10287697	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300017943\|Ga0187819_10326952	Not Available	888	Open in IMG/M
3300017943\|Ga0187819_10669277	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300017943\|Ga0187819_10736292	Not Available	555	Open in IMG/M
3300017946\|Ga0187879_10197981	All Organisms → cellular organisms → Bacteria → Acidobacteria	1127	Open in IMG/M
3300017955\|Ga0187817_10243329	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300017955\|Ga0187817_10894426	Not Available	568	Open in IMG/M
3300017959\|Ga0187779_10224751	All Organisms → cellular organisms → Bacteria → Acidobacteria	1181	Open in IMG/M
3300017970\|Ga0187783_10123980	All Organisms → cellular organisms → Bacteria → Acidobacteria	1904	Open in IMG/M
3300017995\|Ga0187816_10341453	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300017995\|Ga0187816_10423647	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300018001\|Ga0187815_10171973	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300018003\|Ga0187876_1115658	All Organisms → cellular organisms → Bacteria → Acidobacteria	974	Open in IMG/M
3300018006\|Ga0187804_10290119	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300018006\|Ga0187804_10369715	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300018007\|Ga0187805_10575917	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300018008\|Ga0187888_1325539	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300018012\|Ga0187810_10074647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1307	Open in IMG/M
3300018016\|Ga0187880_1029311	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3150	Open in IMG/M
3300018017\|Ga0187872_10133308	Not Available	1206	Open in IMG/M
3300018017\|Ga0187872_10333063	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300018032\|Ga0187788_10125904	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300018033\|Ga0187867_10442424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300018038\|Ga0187855_10343811	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300018044\|Ga0187890_10299730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300018057\|Ga0187858_10135737	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1649	Open in IMG/M
3300018431\|Ga0066655_10097494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1640	Open in IMG/M
3300018468\|Ga0066662_10334694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1293	Open in IMG/M
3300018468\|Ga0066662_11645223	Not Available	670	Open in IMG/M
3300020583\|Ga0210401_10019929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6448	Open in IMG/M
3300021171\|Ga0210405_10286998	All Organisms → cellular organisms → Bacteria → Acidobacteria	1301	Open in IMG/M
3300021171\|Ga0210405_10372449	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300021181\|Ga0210388_10000254	All Organisms → cellular organisms → Bacteria → Acidobacteria	46597	Open in IMG/M
3300021433\|Ga0210391_10361325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1139	Open in IMG/M
3300021433\|Ga0210391_10690143	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300021474\|Ga0210390_10427818	All Organisms → cellular organisms → Bacteria → Acidobacteria	1118	Open in IMG/M
3300021560\|Ga0126371_10563788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300022557\|Ga0212123_10013767	All Organisms → cellular organisms → Bacteria → Acidobacteria	10480	Open in IMG/M
3300022557\|Ga0212123_10106470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2272	Open in IMG/M
3300024295\|Ga0224556_1099344	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300027674\|Ga0209118_1129110	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300027729\|Ga0209248_10076815	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300027767\|Ga0209655_10026306	All Organisms → cellular organisms → Bacteria → Acidobacteria	1951	Open in IMG/M
3300027829\|Ga0209773_10070805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1424	Open in IMG/M
3300027829\|Ga0209773_10179196	All Organisms → cellular organisms → Bacteria → Acidobacteria	885	Open in IMG/M
3300027905\|Ga0209415_10131216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2600	Open in IMG/M
3300027908\|Ga0209006_10215984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1660	Open in IMG/M
3300027986\|Ga0209168_10000685	All Organisms → cellular organisms → Bacteria	30549	Open in IMG/M
3300031708\|Ga0310686_100103955	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300031708\|Ga0310686_104182055	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300031708\|Ga0310686_104737298	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300031708\|Ga0310686_112649449	All Organisms → cellular organisms → Bacteria → Acidobacteria	961	Open in IMG/M
3300032180\|Ga0307471_100835563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1088	Open in IMG/M
3300032261\|Ga0306920_101055971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300032805\|Ga0335078_10930504	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300032805\|Ga0335078_11697054	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300032805\|Ga0335078_12509004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032892\|Ga0335081_10018787	All Organisms → cellular organisms → Bacteria → Acidobacteria	11176	Open in IMG/M
3300032892\|Ga0335081_10740905	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300032895\|Ga0335074_10006500	All Organisms → cellular organisms → Bacteria → Acidobacteria	16220	Open in IMG/M
3300032895\|Ga0335074_11625478	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300033134\|Ga0335073_11021529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	853	Open in IMG/M
3300033158\|Ga0335077_10303743	All Organisms → cellular organisms → Bacteria → Acidobacteria	1746	Open in IMG/M
3300034195\|Ga0370501_0135470	All Organisms → cellular organisms → Bacteria → Acidobacteria	847	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.39%
Aquatic	Environmental → Aquatic	38.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.40%
Freshwater	Environmental → Aquatic → Freshwater	34.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.96%
Peat	Environmental → Terrestrial → Peat	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	34.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.83%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	13.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	13.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.97%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062589_1023847811	3300004156	Soil	YYLARKLSLTIRELMEEQRRRVRSSNPAERLAAALLFPAELSRRLRLLSDSQLGELLEDEVCSCLNLLAPESTICVAAADRLRSPFRTDNYRD*
Ga0066395_109342251	3300004633	Tropical Forest Soil	GLTIREIIAEQRRRLRSANPAERLAGALLIPRLLRERLNDLGDPLIGQLLEDEVWSNLNLLAPESTICLVAADRLRRPTRPEHYRQWRRPSQ*
Ga0066678_103496101	3300005181	Soil	LRSPNPAERLAVALLIPTQLREHLYELGDWQIAELLEDEVWSNLNLLAPESTICLVAADRLRRPARTDYYR*
Ga0066676_102618102	3300005186	Soil	LNLQEIIAEQRRRLCSSNPAERLAAALLIPNLLRERLKELDDDQLGQLLEDEVWSYLNLLAPESTICLVAADRLRSPFRSDNDQD*
Ga0066388_1030822882	3300005332	Tropical Forest Soil	LTIREIIAEQRLRSRSANPAERLAAALLIPRLLRERLNDLGDPLIGQLLEDEVWSNLNLLAPESTICLVAADRLRSPTRPERYRHWRRRSR*
Ga0070709_101859752	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LTFREIIAEHRGRLRSANLAERLAAALLIPNLLRERLNELRDHQLGQLLEDEAWSYLNLLAPESTICLVAADRLRSPFRTDNYRD*
Ga0070735_1000075127	3300005534	Surface Soil	MEEQRRRVRSSNPAERLAAALLFPAELSRCLRLLSDSQLGQLLEDEVWSCLNLLAPESTICLAAADRLRSPFRTDNYRD*
Ga0070733_103406792	3300005541	Surface Soil	LTIQEIIAEQRRRLACGNPAERLAAALLIPNLLRERLNEFGDRQLGQLLEDEVWPCLNLLAPESTICLVAGDRLRSPFRTERNRE*
Ga0066704_106436442	3300005557	Soil	LRSPNPAERLAVALLIPSVLREHLHQLSDEDIAELLDDEVWSNLSLLAPESTICLVAADRLR
Ga0066704_109617222	3300005557	Soil	LDIQEIIAEQRRRLCSPNPVERLAAALLIPNLLRERLKELDDDQLGQLLEDEVWSYLNLLAPESTICLVAADRLRSPFRTDNYRD*
Ga0066702_104051262	3300005575	Soil	LNLQEIIAEQRRHLCSSNPAERLAAALLIPNLLRERLKELDDHQLGQLLEDEVWSYLNLLAPESTICLVVADRLRSPFRTDNTEHRRSNR*
Ga0066654_103414402	3300005587	Soil	LNLQEIIAEQRRRLCSSNPAERLAAALLIPNLLRERLNELGDHQLGQLLEDEVWSYLNLLAPESTICLVAADRLRSPFRSDNDQD*
Ga0070761_107167172	3300005591	Soil	MRSSNPAERLAAALLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI*
Ga0066903_1034225381	3300005764	Tropical Forest Soil	LTIREIIAEQRRRLRSANPAERLAAALLIPRLLRERLNDFGDPLIGQLLGDEVWSNLNLLAPESTICLVAADRLRRPTRPEHYRQWRRPSQ*
Ga0066660_102551071	3300006800	Soil	LNLQEIIAEQRRRLCSSNPAERLAAALLIPNLLRERLKELDDHQLGQLLEDEVWSYLNLLAPESTICLVAA
Ga0073928_108898212	3300006893	Iron-Sulfur Acid Spring	AAALLIPSVLAKRLRLLRDPQLAQLLEGEVWSRMNLLAPESTICLAAADRLRRHVSRHPTPNESEGGI*
Ga0102924_10394203	3300007982	Iron-Sulfur Acid Spring	LTIREIIAEQRRRLGSTNPVERLAAALLIPNLLRERLHELGDWQIAELLEDEVWSKLNLLAPESTICLVAANRLRRPARTEYVR*
Ga0116136_10457932	3300009547	Peatland	MRSSNPAERLAAALLIPGVLAQRLRELSDFNLGQLLDREVCSNLSLFAPEATICLAAVDRLRGHVSRPHKPNESEGGI*
Ga0116102_11951332	3300009632	Peatland	LTIRELITEQRRRLASVNPAERLAAALLIPGVLTERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELTR*
Ga0116118_10032992	3300009637	Peatland	LTIRELITEQRRRLASVNPAERLAAALLIPGVLTERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI*
Ga0116126_10480861	3300009640	Peatland	ERLAAALLIPGVLTERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI*
Ga0074045_104708471	3300010341	Bog Forest Soil	MRSSNPAERLAAALLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELSE*
Ga0126378_122552152	3300010361	Tropical Forest Soil	TPRGESGLTIREIIAEQRRRLRSANPAERLAGALLIPRLLRERLNDFGDPLIGQLLEDEVWSNLNLLAPESTICLVAADRLRRPTRPEHYRQWRRPSQ*
Ga0126381_1002039074	3300010376	Tropical Forest Soil	LTIREIIAEQRRRLRSANPAERLAGALLIPRLLRERLNDFGDPLIGQLLEDEVWSNLNLLAPESTICLVAADRLRRPTRPEHYRQWRRPSQ*
Ga0126381_1020904091	3300010376	Tropical Forest Soil	LTIRELIEEQRRRIRSNNPAERLAAALLIPAELSRRLRVLSDLQLGQLLEDEVWSYLNLLAPEATICLVAADR
Ga0126381_1041037151	3300010376	Tropical Forest Soil	LTILELIEEQRRRIRSGNPAERLAATLLIPAELSRRLRVLSDFQLGQLLEDQVWSYLNLLAPEATICLVAADRLRADIEVTNADH
Ga0136449_1022735002	3300010379	Peatlands Soil	MQSSNPAERLAAALLIPGVLAQRLRDLSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTCRP
Ga0136449_1032033542	3300010379	Peatlands Soil	MRSSNPAERLAAALLIPGVLAKRLCELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI*
Ga0136449_1035572142	3300010379	Peatlands Soil	LTIREIIAEQRRRLASTNPVERLAAALLIPNLLRERLNELRNHELGQLLEDEVWSYLNLLAPESTICLVAADRLRRH
Ga0137379_117795021	3300012209	Vadose Zone Soil	LTIREIIAEQRRRLCSANPAERLAAALLIPNLLRERLNELGDWQIAELLEDDVWSNLNLLSPEATICLVAADRLRRRPIRNGYYR*
Ga0182018_101347101	3300014489	Palsa	VTIREIIAEQRRRLGSSNPVERFAAALLIPGVLAKRLRLLGDPRLAQLLEEEVWSRMNLLAPESTICLAAVDRLRGHVNRQHKPNESEGGI*
Ga0182015_103014073	3300014495	Palsa	VTIREIIAEQRRRLGSSNPVERFAAALLIPGVLAKRLRLLGDPQLAQLLEDEVWSRMNLLAPESTICLAAVDRLRRHANRQP*
Ga0182024_104679782	3300014501	Permafrost	VGESLTIQELIEEQRRRLRSANPAERLAAVLLIPSVLAKRLRLLRDPQLAQLLEDEVWSRMNLLAPESTICLAAVDRLRGHVNRQHKPNESDGGI*
Ga0187856_10042823	3300017925	Peatland	LTIRELITEQRRRLASVNPAERLAAALLIPGVLTERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0187856_10808641	3300017925	Peatland	MRSTIPAERLAAALLIPGVLARRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELTR
Ga0187856_12033802	3300017925	Peatland	VTIRELIAEQRRRLSSANPAERLAAVLLIPSVLAKRLRLLRDPQLGQLLEDEVWSRMNLLAPESTICLAAADRLRGHVNHQHKPNESDGGI
Ga0187806_13178032	3300017928	Freshwater Sediment	MRSTIPAERFAAALLIPGVLAERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELSR
Ga0187808_102876971	3300017942	Freshwater Sediment	MQSSNPAERLAAALLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRRLNRPTKGELSR
Ga0187819_103269522	3300017943	Freshwater Sediment	LTILELIAEQRRRMRSSNPAERFAAALLIPGVLAERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLR
Ga0187819_106692771	3300017943	Freshwater Sediment	MRSTIPAERLAAALLIPAELSRRLRLLSNLEIGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0187819_107362921	3300017943	Freshwater Sediment	MEEQRRRLRSANPAERLAAALLIPGALAKRLRLLRDYQIGQLLEDEVWSRLNLLAPESTVCLLAIERLRQTSRPRRFLRHKHSQRVLPHEGEHLL
Ga0187879_101979813	3300017946	Peatland	VTIQQLIEEQRRRLRSANPAERLAAALLIPGVLAKRLRLLSDPQLAQLLEDEVWSRMNLLAPESTICLAAVGRLRRHANRQP
Ga0187817_102433292	3300017955	Freshwater Sediment	LTILELIAEQRRRLTSVNPAERLAAALLIPGVLAQRLRELSDFNLGQLLDREVCSNLSLFAPEFTVCMEAADRLRQTSRPTKGELT
Ga0187817_108944261	3300017955	Freshwater Sediment	MRSTIPAERFAAALLIPGVLAERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRRLNRPTKGEL
Ga0187779_102247512	3300017959	Tropical Peatland	LTIQEIIAEQHRRLTSANPAERLAAALLIPNLLRERLNELGDHQLGQLLEDEVWSYLNLLAPESTICLVAADRLRSPFRSDKN
Ga0187783_101239803	3300017970	Tropical Peatland	MRSSNPAERLAAALLIPGVLAQRLRELSDFNLGRLLEDEVWSNLNLLAPESTICLVAADRLRNQPRPKTDGD
Ga0187816_103414532	3300017995	Freshwater Sediment	EQRRRMQSSNPAERLAAALLIPGVLAERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELTR
Ga0187816_104236471	3300017995	Freshwater Sediment	ERLAAALLIPGVLTERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0187815_101719732	3300018001	Freshwater Sediment	LTIRELIADQRRRMRSSNPAERLAAALLIPRVLAERLHDLSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELTR
Ga0187876_11156582	3300018003	Peatland	LTIRELIAEQRRRMRSTIPAERLAAALLIPGVLARRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELTR
Ga0187804_102901192	3300018006	Freshwater Sediment	QYWGVRLTILELIAEQRRRMRSSNPAERLAAVLLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0187804_103697152	3300018006	Freshwater Sediment	MRSTIPAERFAAALLIPGVLAERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRRLNRPTKGELTR
Ga0187805_105759172	3300018007	Freshwater Sediment	WSVRLTILELIAEQRRRMRSTIPAERFAAALLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0187888_13255392	3300018008	Peatland	LTILELIAEQRRRMRSTIPAERFAAALLIPGVLAERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAADRLRQTSRPTKGELTR
Ga0187810_100746471	3300018012	Freshwater Sediment	MRSSNPAERLAAALLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELTR
Ga0187880_10293112	3300018016	Peatland	MRSSNAAERLAAALLIPGVLARRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELTR
Ga0187872_101333082	3300018017	Peatland	MRSSNPAERLAAALLIPGVLAQRLRELSDFNLGQLLDREVCSNLSLFAPEATICLAAVDRLRGHVSRPHKPNESEGGI
Ga0187872_103330632	3300018017	Peatland	LTILELIAEQRRRMRSTIPAERLAAALLIPGVLARRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELTR
Ga0187788_101259042	3300018032	Tropical Peatland	MQEQRRRVCSRNPVERLAAALLIPAELSRRLNELGDHQLGQVLEDEVWSYLSLLAPESTVCLVAADRLRNRTEERSTESGRSDR
Ga0187867_104424242	3300018033	Peatland	LCSANPAERLAAVLLIPSVLAKRLRLLRDPQLAQLLEDEVWSRMNLLAPESTICLAAADRLRGHVNRQHKPNESDGGI
Ga0187855_103438112	3300018038	Peatland	VLLIPSVLAKRLRLLRDPQLAQLLEDEVWSRMNLLAPESTICLAAADRLRGHVNRQHKPNESDGGI
Ga0187890_102997303	3300018044	Peatland	LRSANPAERLAAALLIPGVLAKRLRLLSDPQLAQLLEDEVWSRMNLLAPESTICLAAVGRLRRHANRQ
Ga0187858_101357374	3300018057	Peatland	LAAALLIPGVLTERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0066655_100974943	3300018431	Grasslands Soil	LDIQEIIAEQRRRLCSPNPVERLAAALLIPNLLRERLKELDDDQLGQLLEDEVWSYLNLLAPESTICLVAADRLRSPFRTDNDQD
Ga0066662_103346942	3300018468	Grasslands Soil	LDIQEIIAEQRRRLCSPNPVERLAAALLIPNLLRERLKELDDHQLGQLLEDEVWSYLNLLAPESTICLVVADRLRSPFRTDNTEHRRSNR
Ga0066662_116452232	3300018468	Grasslands Soil	LTIQEIIAEQRRRLCSANPAERLAAALLIPNLLRERLNELSDHQLGQLLEDEVWSYLNLLAPESTVCLVAADRLRSPFRTDNYRD
Ga0210401_100199292	3300020583	Soil	MTIREIIAEQRRHLRSANPAERLAAALLIPNLLRERLNELGDPQIGQLLEDEVWSNLKLLSPESTICLVAADRLRRLARIENCR
Ga0210405_102869983	3300021171	Soil	RLGSANPAERLAAALLIPNLLRERLNELDDRQIGQLLEDEVWSNLNLLAPESTICLVAADRLRRHANRQP
Ga0210405_103724491	3300021171	Soil	LTILELIEEQRRRVRSVNPAERLAAALLIPAELSRRLRVLSDFQLGQLLEDDVWSYLNLLAPESTICLVAAD
Ga0210388_1000025438	3300021181	Soil	LTIRELIAEQRRRLSSVNPAERLAAALLIPSVLAKRLRELSDFDLGQLLEDEVWSNLNLLTPESTICLAAVDRLRRHVSRPHKPNESEGGI
Ga0210391_103613252	3300021433	Soil	LTIRELIEEQRRRVNSANPAERLAAALLIPGELTKGLRYLHDFEIAQLLEDEVWSNLNLAAPEATVCMEAVD
Ga0210391_106901431	3300021433	Soil	LAAAAQICLYQYWGVRLTILELIAEQRRRMQSSNPAQRLAAALLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRGHVSRPHRPSESKGGI
Ga0210390_104278182	3300021474	Soil	VTIREIIAEQRRRLGSANPAERLAAALLIPNLLRERLNELDDRQIGQLLEDEVWSNLNLLAPESTICLVAADRLRRHANRQP
Ga0126371_105637883	3300021560	Tropical Forest Soil	LTIREIIAEQRRRLRSANPAERLAAALLIPRLLRERLNDLGDPLIGQLLEDEVWSNLNLLAPESTICLVAADRLRRPTRPEHYRQWRRPSQ
Ga0212123_100137674	3300022557	Iron-Sulfur Acid Spring	MRSSNPAERLAAALLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0212123_101064704	3300022557	Iron-Sulfur Acid Spring	LTIREIIAEQRRRLGSTNPVERLAAALLIPNLLRERLHELGDWQIAELLEDEVWSKLNLLAPESTICLVAANRLRRPARTEYVR
Ga0224556_10993441	3300024295	Soil	LTIRELIAEQRRRLTSVNPAERLAAALLIPGVLAKRLCELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVIRPHKPNESEGGI
Ga0209118_11291102	3300027674	Forest Soil	VGDELSSRELIAEQRRRLRSDNPAERLAAALVIPAVLARQLRGLPDTQLAQLLEDEVWSNLNLFAPESTICLVAADRLRRRVNRQPKLNESEGEI
Ga0209248_100768152	3300027729	Bog Forest Soil	LTIRELIAEQRRRMRSINPAERLAAAILIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHSPNESEGGI
Ga0209655_100263062	3300027767	Bog Forest Soil	MRSINPAERLAAAILIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0209773_100708051	3300027829	Bog Forest Soil	LAAALLIPSVLAKRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0209773_101791961	3300027829	Bog Forest Soil	MRSINPAERLAAAILIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHSPNESEGGI
Ga0209415_101312162	3300027905	Peatlands Soil	MRSSNPAERLAAALLIPGVLTERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0209006_102159842	3300027908	Forest Soil	VRGKGLTIRELVTEQRRRLCSADPAERLAAALLMPNLLRERLKELDDWEMAQLLEEEVWSNLKLLAPESTICLVAADRLRRPSRIEYCLN
Ga0209168_1000068526	3300027986	Surface Soil	MEEQRRRVRSSNPAERLAAALLFPAELSRCLRLLSDSQLGQLLEDEVWSCLNLLAPESTICLAAADRLRSPFRTDNYRD
Ga0310686_1001039552	3300031708	Soil	IAEQRRRLASTNPVERLAAALLIPNLLRERLNELRNHELGQLLEDEVWSYLNLLAPESTICLVAADRLSRRVNRKEPNESKGGI
Ga0310686_1041820552	3300031708	Soil	LTIRELIAEQRRRLTSVNPAERLAAALLIPGVLAQRLCELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVIRPHKPNESEGGI
Ga0310686_1047372982	3300031708	Soil	LTIRELIAEQRRRLASVNPAERLAAALLIPSVLAERLRDLSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0310686_1126494491	3300031708	Soil	IWELIEEQRRRLTSVNPAERLAAALLIPGVLAKRLRELSDFNLGQLLEDEVWSNLNLLGPESTICLVAADRLRQTSRPTKGELTR
Ga0307471_1008355633	3300032180	Hardwood Forest Soil	LTIQQIIEEQRRRLTSANPAERIAAALLIPNLLRERLNELGDHELGQLLEDEVWSYLNLLAPESTICLVAADRLRSPRTNKHRE
Ga0306920_1010559713	3300032261	Soil	MGGSRHRPIQRQIQELIEEQRRRLRSSNRAERLAAALLLPAFLARRLRRLDDCQLGQLLEDEVFSNLDLLAPEATICLVAAD
Ga0335078_109305042	3300032805	Soil	LTILELIAEQRRRMQSSNPAERLAAGLLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0335078_116970542	3300032805	Soil	LTIRELIAEQRRRLASVNPAERLAAALLIPGVLAQRLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPPKGELTR
Ga0335078_125090042	3300032805	Soil	MGAALTIQELIEEQRRRLHSANPTECLAAAVLIPGVLAERLRELTDFNLGQLLEDEVWSNLNLLAPESTVCLAAADRLRRPARNRNHR
Ga0335081_1001878712	3300032892	Soil	MRSSNPAERFAAALLIPGVLAERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLSAVDRLRGHVSRPHKPNESEGGI
Ga0335081_107409052	3300032892	Soil	LTILELIAEQRRRIQSTIPAERLAAALLIPAELSRRLRLLSNLEIGQLLEDEVWSNLNLLAPESTICLVAADRLRQISRPTKGELSR
Ga0335074_1000650022	3300032895	Soil	LTILELIAEQRRRTRSSNPAERFAAALLIPGVLAERLRDLSDFNLGQLLEDEVWSNLNLLAPESTICLAAVDRLRGHVSRPHKPNESEGGI
Ga0335074_116254781	3300032895	Soil	NPAERLAAALLIPGVLTERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELPR
Ga0335073_110215292	3300033134	Soil	LTIRELIAEERRRMQSSNPAERLAAALLIPGVLTERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLVAADRLRQTSRPTKGELPR
Ga0335077_103037434	3300033158	Soil	LLIPGVLAERLRELSDFNLGQLLEDEVWSNLNLLAPESTICLSAVDRLRGHVSRPHKPNESEGGI
Ga0370501_0135470_591_845	3300034195	Untreated Peat Soil	RRRLRSDNPAERLAAALLIPNLLRERLNALPDRRIGQLLEQEVWSRMNLVAPEATVCLAAADRLRSHTNCSTQAERIPRRTPRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102879

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences