Metagenome Family F102919

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102919
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	44 residues
Representative Sequence	NLPGDIWMRGAIVQGSDIRPPLGVEIKIQGKQILAIRSE
Number of Associated Samples	87
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	86.14 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.059 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.683 % of family members)
Environment Ontology (ENVO)	Unclassified (35.644 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 32.84% Coil/Unstructured: 67.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF06127	Mpo1-like	38.61
PF13620	CarboxypepD_reg	9.90
PF04972	BON	4.95
PF01321	Creatinase_N	2.97
PF09329	zf-primase	1.98
PF08501	Shikimate_dh_N	0.99
PF14294	DUF4372	0.99
PF00483	NTP_transferase	0.99
PF00478	IMPDH	0.99
PF00593	TonB_dep_Rec	0.99
PF01527	HTH_Tnp_1	0.99
PF05598	DUF772	0.99
PF01850	PIN	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG4539	2-hydroxy fatty acid dioxygenase MPO1 (alpha-oxidation of fatty acids)	Lipid transport and metabolism [I]	38.61
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	2.97
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.06 %
Unclassified	root	N/A	5.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.06 %
Unclassified	root	N/A	5.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.06 %
Unclassified	root	N/A	5.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.38 %
Unclassified	root	N/A	5.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.97 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	22.77 %
Unclassified	root	N/A	5.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.77 %
Unclassified	root	N/A	5.94 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.77 %
Unclassified	root	N/A	5.94 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	2.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.77 %
Unclassified	root	N/A	5.94 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	2.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.77 %
Unclassified	root	N/A	5.94 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	2.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M102J4Y29	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300003368\|JGI26340J50214_10166990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300004080\|Ga0062385_10053642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1758	Open in IMG/M
3300005537\|Ga0070730_10566560	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300006050\|Ga0075028_100836222	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300006796\|Ga0066665_10674768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300006806\|Ga0079220_10027658	All Organisms → cellular organisms → Bacteria → Acidobacteria	2473	Open in IMG/M
3300009038\|Ga0099829_10734371	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300009631\|Ga0116115_1014756	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300009764\|Ga0116134_1279898	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300010048\|Ga0126373_11523677	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300010048\|Ga0126373_11647300	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300010048\|Ga0126373_12671967	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300010341\|Ga0074045_10688580	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300010343\|Ga0074044_10041151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	3207	Open in IMG/M
3300010361\|Ga0126378_11570921	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300010376\|Ga0126381_101094848	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300010376\|Ga0126381_103394291	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300010379\|Ga0136449_102293205	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300012096\|Ga0137389_10116822	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300012202\|Ga0137363_10533545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300012351\|Ga0137386_10431905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300012361\|Ga0137360_11675084	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300012363\|Ga0137390_10607781	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300012685\|Ga0137397_11252237	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300012925\|Ga0137419_10017165	All Organisms → cellular organisms → Bacteria → Acidobacteria	4127	Open in IMG/M
3300012927\|Ga0137416_11565778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300012971\|Ga0126369_12332367	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300014153\|Ga0181527_1229846	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300014155\|Ga0181524_10284494	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300014165\|Ga0181523_10020116	All Organisms → cellular organisms → Bacteria → Acidobacteria	4449	Open in IMG/M
3300016371\|Ga0182034_11563407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300016404\|Ga0182037_10832504	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300016404\|Ga0182037_11423205	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300016422\|Ga0182039_11456494	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300016445\|Ga0182038_10317327	Not Available	1280	Open in IMG/M
3300016445\|Ga0182038_12026759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300017822\|Ga0187802_10147610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300017934\|Ga0187803_10411404	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300017942\|Ga0187808_10185327	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	923	Open in IMG/M
3300017943\|Ga0187819_10093441	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300017955\|Ga0187817_10115543	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300017972\|Ga0187781_11148819	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300018018\|Ga0187886_1108792	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300018044\|Ga0187890_10423958	Not Available	746	Open in IMG/M
3300018064\|Ga0187773_10041844	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300018085\|Ga0187772_10001632	All Organisms → cellular organisms → Bacteria → Acidobacteria	10764	Open in IMG/M
3300018086\|Ga0187769_10429164	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300020580\|Ga0210403_10182728	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300020580\|Ga0210403_11534932	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300020581\|Ga0210399_10005331	All Organisms → cellular organisms → Bacteria	9998	Open in IMG/M
3300020581\|Ga0210399_10408554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300020581\|Ga0210399_11242361	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300021168\|Ga0210406_11149749	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300021181\|Ga0210388_10384843	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300021405\|Ga0210387_10615715	All Organisms → cellular organisms → Bacteria → Acidobacteria	964	Open in IMG/M
3300021420\|Ga0210394_10212424	All Organisms → cellular organisms → Bacteria → Acidobacteria	1689	Open in IMG/M
3300021420\|Ga0210394_10458329	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300021420\|Ga0210394_11025089	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300021420\|Ga0210394_11175761	Not Available	659	Open in IMG/M
3300021420\|Ga0210394_11862845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300021433\|Ga0210391_10063704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2924	Open in IMG/M
3300021475\|Ga0210392_10244277	All Organisms → cellular organisms → Bacteria → Acidobacteria	1269	Open in IMG/M
3300021477\|Ga0210398_10249496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1447	Open in IMG/M
3300021479\|Ga0210410_10759181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300021560\|Ga0126371_13036842	Not Available	568	Open in IMG/M
3300026377\|Ga0257171_1021395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300026557\|Ga0179587_10435271	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300026909\|Ga0207858_1031222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300026941\|Ga0207741_1032088	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300027042\|Ga0207766_1016024	Not Available	855	Open in IMG/M
3300027063\|Ga0207762_1003046	All Organisms → cellular organisms → Bacteria	3584	Open in IMG/M
3300027698\|Ga0209446_1205161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300027824\|Ga0209040_10177721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1124	Open in IMG/M
3300027846\|Ga0209180_10513397	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300027862\|Ga0209701_10346723	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300031545\|Ga0318541_10295042	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300031561\|Ga0318528_10552978	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031640\|Ga0318555_10608354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300031747\|Ga0318502_10334389	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300031796\|Ga0318576_10461418	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031846\|Ga0318512_10480337	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300031897\|Ga0318520_10860353	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300031912\|Ga0306921_10174059	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300031941\|Ga0310912_10853852	Not Available	702	Open in IMG/M
3300032001\|Ga0306922_11255763	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300032001\|Ga0306922_11383555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300032035\|Ga0310911_10282633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300032044\|Ga0318558_10683948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300032059\|Ga0318533_10342393	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300032065\|Ga0318513_10382230	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300032067\|Ga0318524_10598878	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300032094\|Ga0318540_10583920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300032174\|Ga0307470_10680018	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300032261\|Ga0306920_100938357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300032770\|Ga0335085_10057483	All Organisms → cellular organisms → Bacteria → Acidobacteria	5216	Open in IMG/M
3300032828\|Ga0335080_11056421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	824	Open in IMG/M
3300032828\|Ga0335080_11390997	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300032897\|Ga0335071_10000598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	39622	Open in IMG/M
3300032954\|Ga0335083_10529794	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300032955\|Ga0335076_11119168	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.17%
Aquatic	Environmental → Aquatic	16.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.17%
Freshwater	Environmental → Aquatic → Freshwater	15.84%
Sediment	Environmental → Aquatic → Sediment	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.88%
Loam	Environmental → Terrestrial → Soil → Loam	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_03048280	2189573001	Grass Soil	PGDIWMRGAIVQGSDIRPPLGVEIKIQGKQILAIRSE
JGI26340J50214_101669901	3300003368	Bog Forest Soil	LKTANLPGNIWIRGAIVQGSDIRPPYGIELKIQGKEILGIRSE*
Ga0062385_100536422	3300004080	Bog Forest Soil	VNLPGNIWIRGAIVQGSDVRPPLAVEIQIHDKQILAIRSE*
Ga0070730_105665602	3300005537	Surface Soil	LYDPLKTSNLPGDIWMRGAIVQGSDIRPPFGVEIKVQGKQILAIRSE*
Ga0075028_1008362222	3300006050	Watersheds	SNLPGDIWMRGAIVQGSDIRPPFGVEIQVQGKQILAIRSE*
Ga0066665_106747683	3300006796	Soil	PGGNIFARGGIVQGSDLRPPFGIELRVRGKEIEAIRSE*
Ga0079220_100276581	3300006806	Agricultural Soil	NVFIRGGIVQGSDLRPPLEIEIQIQGKEILAIRSE*
Ga0099829_107343711	3300009038	Vadose Zone Soil	DPLKTANLPGNTWIRGAIVQGSDVRPPLGVEIQIRGKEILATRTE*
Ga0116115_10147563	3300009631	Peatland	PLKTASLLGNIWIRGAIVQGSDIRPPFGVELQIQGKQILAIRSE*
Ga0116134_12798982	3300009764	Peatland	PCSHTLYDPLKTASLLGNIWIRGAIVQGSDIRPPFGVELQIQGKQILAIRSE*
Ga0126373_115236772	3300010048	Tropical Forest Soil	NIWIRGAIVQGSDIRPPLGVEIKIQGKQILAIRSE*
Ga0126373_116473002	3300010048	Tropical Forest Soil	GNIWVRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE*
Ga0126373_126719671	3300010048	Tropical Forest Soil	YDPLKMFNLPGNIWIRGAIVQGSDIRPPLGIEVEFRGNKILALRSE*
Ga0074045_106885801	3300010341	Bog Forest Soil	LPGNIWIRGGIVQGSDIRPPFGVELQIQGKQILAIRSE*
Ga0074044_100411511	3300010343	Bog Forest Soil	IWIRGAIVQGSDVRPPLAVEIQIHDKQILAIRSE*
Ga0126378_115709211	3300010361	Tropical Forest Soil	NVWIRGAIVQGGDIRPPLGIEIKIQGKQILAVRTE*
Ga0126381_1010948481	3300010376	Tropical Forest Soil	YDPLKTANLPGNVWIRGAIVQGGDIRPPLGIEIKIQGKQILAVRTE*
Ga0126381_1033942913	3300010376	Tropical Forest Soil	LSGNIWVRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE*
Ga0136449_1022932051	3300010379	Peatlands Soil	LKTASLPGNTWIRGAIVQGSDIRPPYGIEVKVQGKDILAIRAEQ*
Ga0137389_101168221	3300012096	Vadose Zone Soil	TANLPGNTWIRGAIVQGSDVRPPLGVEIQIRGKEILATRTE*
Ga0137363_105335452	3300012202	Vadose Zone Soil	GDVWMRGGIVQGSDIRPPLGVEIKIQSKQILAMRSE*
Ga0137386_104319051	3300012351	Vadose Zone Soil	PLKMTNLPGNFFVRGGIVQGSDLRPPLGVEIRVRGRNILAIRTE*
Ga0137360_116750841	3300012361	Vadose Zone Soil	DVWMRGGIVQGSDIRPPLGVEIKIQSKQILAMRSE*
Ga0137390_106077811	3300012363	Vadose Zone Soil	HPLVGNPCSRTLYDPLKTSNLPGDIWMRGGIVQGSDIRPPFGVEIKILGKQILAIRSE*
Ga0137397_112522371	3300012685	Vadose Zone Soil	NLPGDIWMRGAIVQGSDIRPPFGVEIKIQGKQILAMRSE*
Ga0137419_100171652	3300012925	Vadose Zone Soil	GNPCSRTLYDPLKTSNLPGDVWMRGGIVQGSDIRPPLGVEIKIQSKQILAMRSE*
Ga0137416_115657782	3300012927	Vadose Zone Soil	DPLKTSNLPGDVWMRGGIVQGSDIRPPLGVEIKIQSKQILAMRSE*
Ga0126369_123323673	3300012971	Tropical Forest Soil	YDPLKTTSLSGNIWVRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE*
Ga0181527_12298461	3300014153	Bog	LRTASLPGSFWVRGAIVQGSDIRPPFGVELQIQGKQILAIRTE*
Ga0181524_102844941	3300014155	Bog	GNIWVRGAIVQGSDIRPPFGVELQIQGKQILAIRTE*
Ga0181523_100201161	3300014165	Bog	CSRTLYDPLKTFSLPGNVWIRGAIVQGSDVRPPLGVEIQIQGKQILAIRSE*
Ga0182034_115634071	3300016371	Soil	PLRTVNLPGNIWIRGAIVQGSDIRPPLGVEIRIQGKEIQAIRSE
Ga0182037_108325041	3300016404	Soil	LYDPLKTANLPGNVWIRGAIVQGGDIRPPLGIEIKIQGKQILAVRTE
Ga0182037_114232051	3300016404	Soil	HPLVGNPCSHTLYDPLKMFNLPGNIWIRGAIVQGSDIRPPLGIEVEVRGNKILALRSE
Ga0182039_114564941	3300016422	Soil	NVCIRRAIVHVVDIRPPLGIEIKIQGKQILAVRTE
Ga0182038_103173273	3300016445	Soil	YDPMKTTNLPGDIWIRGGIVQGSDLRPPFGVEIEIQGKQILAIRSE
Ga0182038_120267592	3300016445	Soil	PLVGNPCTHVLYDPLRTANLPGNTWIRGAIVQGSDIRPPYGIEIKVQGKEVLAIRAEQ
Ga0187802_101476101	3300017822	Freshwater Sediment	NVWIRGAIVQGSDIRPPLGVEIEVRGNKILAIRTE
Ga0187803_104114041	3300017934	Freshwater Sediment	RTLFDPLRTGSLPGNTWVRGAIVQGSEIRPPFGVEIKIQGKQILAIRTE
Ga0187808_101853271	3300017942	Freshwater Sediment	PLKTASLPGNIWVRGAIVQGSDVRPPLGVEIQIHNNQILALRTE
Ga0187819_100934411	3300017943	Freshwater Sediment	TNLPGNIWIRGTIVQGGDIRPPLGVEIEIQDKEILAIRTE
Ga0187817_101155431	3300017955	Freshwater Sediment	THPLVGNPCSRTLYDPLKTVSLPGNIWIRGAIVQGSDVRPTLGVEIKIQGKQILAVRTE
Ga0187781_111488192	3300017972	Tropical Peatland	GNPCSHTLYDPLVTANLPGAGNIWIRGAIVQGSDIRPPLGVEIRVQGKQILAIRTE
Ga0187886_11087921	3300018018	Peatland	PCSRTLYDPLRTGSLPGNIWIRGAIVQGSDIRPPFGVQLQIQGKQILAIRSE
Ga0187890_104239581	3300018044	Peatland	NVLVRGAIVQGSDIRPPFGVELQIQGKQILAIRSE
Ga0187773_100418441	3300018064	Tropical Peatland	LAGNIWVRGAIVQGSDIRPPLGVEIRIEGKQIQAIRSE
Ga0187772_100016327	3300018085	Tropical Peatland	SYPGNVWIRGAIVQGSDVRPPIGVEIKIQGKEILAIRTE
Ga0187769_104291641	3300018086	Tropical Peatland	CSHTLYDPLVTANLPGAGNIWIRGAIVQGSDIRPPLGVEIKVQGKQILAIRTE
Ga0210403_101827282	3300020580	Soil	NLPGDIWMRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE
Ga0210403_115349321	3300020580	Soil	VGNPCSRTLYDPLKTSNLPGDIWMRGAIVQGSDIRPPFGVEIKIQGKQILAMRSE
Ga0210399_100053311	3300020581	Soil	SNLPGDIWMRGGIVQGSDIRPPLGVEIKIQGKQILAIRSE
Ga0210399_104085542	3300020581	Soil	LPGDIWMRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE
Ga0210399_112423611	3300020581	Soil	PLVGNPCSHTLYDPLKTSNLPGDIWMRGGIVQGSDIRPPLGVEIKIQGKQILAIRSE
Ga0210406_111497492	3300021168	Soil	NVWIRGAIVQGSDIRPPYGVEIKVQGKQILAVRSE
Ga0210388_103848432	3300021181	Soil	CTRVLFDPLKTTNLPGNLWIRGAIIQGSDIRPPIGVEIKIQGKDVLATRTE
Ga0210387_106157151	3300021405	Soil	GNPCSRTLYDPLKTSNLPGDIWMRGGIVQGSDIRPPLGVEIKIQGKQILAIRSE
Ga0210394_102124242	3300021420	Soil	ANHPLVGNPCSRTLYDALKTSNLPGDIWMRGGIVQGSDIRPPLGVEIKIQGKQILAIRSE
Ga0210394_104583293	3300021420	Soil	TLYDPLKTANLPGNVWIRGAIVQGSDIRPPYGVEIKVQGKQILAVRSE
Ga0210394_110250891	3300021420	Soil	VGNPCSRTLYDPLKTSNLPGDIWMRGGIVQGSDIRPPLGVEIKIQGKQILAIRSE
Ga0210394_111757612	3300021420	Soil	GNPCSHTLYDPLKTANLPGNVWIRGAIVQGSDIRPPYGVEIKVQGKQILAVRSE
Ga0210394_118628451	3300021420	Soil	LPGNTWIRGAIVQGSDIRPPYGIEIKVQGKEILATRAEQ
Ga0210391_100637041	3300021433	Soil	PGNLWIRGAIIQGSDIRPPIGVEIQIQGKNVLATRTE
Ga0210392_102442771	3300021475	Soil	SNLPGDVWMRGAIVQGSDIRPPFGVEIRIQNKQILAIRSE
Ga0210398_102494961	3300021477	Soil	KTSNLPGDIWMRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE
Ga0210410_107591811	3300021479	Soil	NLPGDIWMRGAIVQGSDIRPPLGVEIKIQGKQILAIRSE
Ga0126371_130368421	3300021560	Tropical Forest Soil	TLYDPLKTANLPGNVWIRGAIVQGGDIRPPLGIEIKIQGKQILAVRTE
Ga0257171_10213951	3300026377	Soil	LPGDVWMRGAIVQGSDIRPPLGVEIKIQGKQILAIRSE
Ga0179587_104352711	3300026557	Vadose Zone Soil	CSRTLYDPLKTSNLPGDVWMRGGIVQGSDIRPPLGVEIKIQSKQILAIRSE
Ga0207858_10312221	3300026909	Tropical Forest Soil	GDIWIRGGIVQGSDLRPPFGVEIEIQGKQILAIRSE
Ga0207741_10320881	3300026941	Tropical Forest Soil	GNPCSRTLYDPMKTANLPGDIWIRGGIVQGSDLRPPFGVEIEIQGKQILAIRSE
Ga0207766_10160242	3300027042	Tropical Forest Soil	NLPGDNWIRGGIVQGSDLRPPFGVEIEIQGKQILAIRSE
Ga0207762_10030461	3300027063	Tropical Forest Soil	TLYDPMKTANLPGDIWIRGGIVQGSDLRPPFGVEIEIQGKQILAIRSE
Ga0209446_12051612	3300027698	Bog Forest Soil	KTANLPGNIWIRGAIVQGSDIRPPYGVELKIQGKEILAIRSE
Ga0209040_101777211	3300027824	Bog Forest Soil	KTANLPGNIWIRGAIVQGSDIRPPYGIELKIQGKEILGIRSE
Ga0209180_105133971	3300027846	Vadose Zone Soil	DPLKTANLPGNTWIRGAIVQGSDVRPPLGVEIQIRGKEILATRTE
Ga0209701_103467232	3300027862	Vadose Zone Soil	TLYDPLKTANLPGNTWIRGAIVQGSDVRPPLGVEIQIRGKEILATRTE
Ga0318541_102950423	3300031545	Soil	GDIWIRGGIVQGSDLRPPFGVEIEIQGKQVLAIRSE
Ga0318528_105529782	3300031561	Soil	SLTGNIWVRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE
Ga0318555_106083541	3300031640	Soil	DFFVRGGIVQGSDLRPPLGVEIRVRGKNILAIRTE
Ga0318502_103343892	3300031747	Soil	KTTSLTGNIWVRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE
Ga0318576_104614183	3300031796	Soil	TTNLPGDIWIRGGIVQGSDLRPPFGVEIEIQGKQILAIRSE
Ga0318512_104803372	3300031846	Soil	TANLPGDIWIRGGIVQGSDLRPPFGVEIEIQGKQILAIRSE
Ga0318520_108603532	3300031897	Soil	LRTSSLPPDNIWIRGAIVQGSDIRPPFGVEIKIQNKQILAMRSE
Ga0306921_101740594	3300031912	Soil	RTLYDPMKTANLPGDIWIRGGIVQGSDLRPPFGVEIEIQGKQILAIRSE
Ga0310912_108538521	3300031941	Soil	GNIWMRGGIVQGSDIRPPFGVEIAIHGQQILAIRSE
Ga0306922_112557631	3300032001	Soil	YDPLKTTSLSGNIWVRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE
Ga0306922_113835551	3300032001	Soil	LYDPLRTSSLPPDNIWIRGAIVQGSDIRPPFGVEIKIQNKQILAMRSE
Ga0310911_102826331	3300032035	Soil	LPGDFFVRGGIVQGSDLRPPLGVEIRVRGKNILAIRTE
Ga0318558_106839482	3300032044	Soil	PGNVWIRGAIVQGGDIRPPLGIEIKIQGKQILAVRTE
Ga0318533_103423933	3300032059	Soil	GNPCSRTLYDPLNTTSLPGNVWVRGGIVQGSDIRPPFGVEIEIQGKQILAIRSE
Ga0318513_103822301	3300032065	Soil	GNPCSRTLYDPLKTTSLSGNIWVRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE
Ga0318524_105988781	3300032067	Soil	RTLYDPLKTTSLTGNIWVRGGIVQGSDIRPPFGVEIKIQGKQILAIRSE
Ga0318540_105839202	3300032094	Soil	TNLPGDFFVRGGIVQGSDLRPPLGVEIRVRGKNILAIRTE
Ga0307470_106800181	3300032174	Hardwood Forest Soil	SRTLYDPLRTSNLPGGVWMRGGIVQGSDIRPPFGVEIKIQSKQILAMRSE
Ga0306920_1009383573	3300032261	Soil	YDPLKTASLPGNTWIRGAIVQGSDIRPPYGVELKVQGKDILAIRAEQ
Ga0335085_100574834	3300032770	Soil	DPLRTTSLPGNVWIRGGIVQGSDIRPPFGVEIRIQGKQILAIRSE
Ga0335080_110564211	3300032828	Soil	HPLVGNPCTHTLYDPLKTANLPGNIWIRGAIVQGSDVRPPLGVEIRVRDKQILAIRTE
Ga0335080_113909972	3300032828	Soil	HTLYDPLKQASLAGNVWVRGAIVQGSDIRPPLGVEIRVQGKQIQAIRSE
Ga0335071_100005981	3300032897	Soil	PLKTTSLPPDGIWIRGAIVQGSDIRPPFGIEIKIQGKQILAIRSE
Ga0335083_105297941	3300032954	Soil	GNPCSRTLYDPLKTTSLPPDNIWIRGAIVQGSDIRPPLGVEIKIQGKQILAIRSE
Ga0335076_111191681	3300032955	Soil	LYDPLKTTSLPPDNIWIRGAIVQGSDIRPPLGVEIKIQGKQILAIRSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102919

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences