Metagenome Family F103000

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103000
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	72 residues
Representative Sequence	MAGGRQPRTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV
Number of Associated Samples	92
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.80 %
% of genes near scaffold ends (potentially truncated)	21.78 %
% of genes from short scaffolds (< 2000 bps)	70.30 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (45.545 % of family members)
Environment Ontology (ENVO)	Unclassified (67.327 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.317 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.44% β-sheet: 0.00% Coil/Unstructured: 41.56%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02685	Glucokinase	41.58
PF04185	Phosphoesterase	29.70
PF02861	Clp_N	0.99
PF09360	zf-CDGSH	0.99
PF12167	Arm-DNA-bind_2	0.99
PF13361	UvrD_C	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0837	Glucokinase	Carbohydrate transport and metabolism [G]	41.58
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	29.70
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.02 %
Viruses	superkingdom	All Organisms → Viruses	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	46.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10075825	All Organisms → Viruses → Predicted Viral	1031	Open in IMG/M
3300002561\|JGI25384J37096_10031880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2055	Open in IMG/M
3300002908\|JGI25382J43887_10022352	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3378	Open in IMG/M
3300005166\|Ga0066674_10003031	All Organisms → cellular organisms → Bacteria	6278	Open in IMG/M
3300005172\|Ga0066683_10569689	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005172\|Ga0066683_10749174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300005174\|Ga0066680_10007999	All Organisms → cellular organisms → Bacteria	5263	Open in IMG/M
3300005175\|Ga0066673_10095961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1584	Open in IMG/M
3300005177\|Ga0066690_10704582	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005178\|Ga0066688_10125247	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300005179\|Ga0066684_10047563	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2441	Open in IMG/M
3300005180\|Ga0066685_10158174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1544	Open in IMG/M
3300005180\|Ga0066685_10977940	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300005181\|Ga0066678_10093818	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300005186\|Ga0066676_10424792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	898	Open in IMG/M
3300005186\|Ga0066676_10617237	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005187\|Ga0066675_10096257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1943	Open in IMG/M
3300005445\|Ga0070708_101166595	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005447\|Ga0066689_10521370	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005447\|Ga0066689_10596714	Not Available	696	Open in IMG/M
3300005536\|Ga0070697_100231619	All Organisms → cellular organisms → Bacteria → Proteobacteria	1576	Open in IMG/M
3300005540\|Ga0066697_10087695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1802	Open in IMG/M
3300005552\|Ga0066701_10058579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2143	Open in IMG/M
3300005553\|Ga0066695_10045477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2596	Open in IMG/M
3300005554\|Ga0066661_10157928	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1390	Open in IMG/M
3300005554\|Ga0066661_10216194	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300005556\|Ga0066707_10581060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300005556\|Ga0066707_10676734	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005559\|Ga0066700_10653467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300005561\|Ga0066699_10726311	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005576\|Ga0066708_10440053	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	837	Open in IMG/M
3300005586\|Ga0066691_10906700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300005587\|Ga0066654_10398577	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	750	Open in IMG/M
3300005598\|Ga0066706_10052722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2758	Open in IMG/M
3300005598\|Ga0066706_10076189	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300006032\|Ga0066696_10039986	All Organisms → cellular organisms → Bacteria → Proteobacteria	2572	Open in IMG/M
3300006791\|Ga0066653_10117751	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1241	Open in IMG/M
3300006796\|Ga0066665_10690794	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006797\|Ga0066659_10070295	All Organisms → cellular organisms → Bacteria	2287	Open in IMG/M
3300007265\|Ga0099794_10040806	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300009012\|Ga0066710_101159343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1196	Open in IMG/M
3300009088\|Ga0099830_11646156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300009137\|Ga0066709_100899537	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300009143\|Ga0099792_11063796	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300010301\|Ga0134070_10015811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2417	Open in IMG/M
3300010304\|Ga0134088_10152499	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300010333\|Ga0134080_10347121	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300010335\|Ga0134063_10056808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1719	Open in IMG/M
3300010336\|Ga0134071_10143502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1158	Open in IMG/M
3300011269\|Ga0137392_11176020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300011270\|Ga0137391_10306811	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300011271\|Ga0137393_11464055	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012096\|Ga0137389_10034691	All Organisms → cellular organisms → Bacteria	3695	Open in IMG/M
3300012198\|Ga0137364_10504785	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300012199\|Ga0137383_10069297	All Organisms → cellular organisms → Bacteria	2540	Open in IMG/M
3300012202\|Ga0137363_10353215	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300012206\|Ga0137380_10350505	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300012207\|Ga0137381_10099035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2470	Open in IMG/M
3300012208\|Ga0137376_10308602	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300012209\|Ga0137379_10533359	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1081	Open in IMG/M
3300012210\|Ga0137378_11862576	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300012351\|Ga0137386_11072463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300012356\|Ga0137371_10168170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1720	Open in IMG/M
3300012356\|Ga0137371_10801591	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300012359\|Ga0137385_10351256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1262	Open in IMG/M
3300012361\|Ga0137360_11713144	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012362\|Ga0137361_11037016	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300012363\|Ga0137390_10012434	All Organisms → cellular organisms → Bacteria	7616	Open in IMG/M
3300012582\|Ga0137358_11014908	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012927\|Ga0137416_10751458	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300012944\|Ga0137410_10439452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1057	Open in IMG/M
3300012976\|Ga0134076_10107568	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300012977\|Ga0134087_10080383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1336	Open in IMG/M
3300014154\|Ga0134075_10153979	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300015264\|Ga0137403_10009412	All Organisms → cellular organisms → Bacteria	10859	Open in IMG/M
3300015358\|Ga0134089_10045301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1591	Open in IMG/M
3300017656\|Ga0134112_10017493	All Organisms → cellular organisms → Bacteria	2434	Open in IMG/M
3300017657\|Ga0134074_1006604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3710	Open in IMG/M
3300018431\|Ga0066655_10666108	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300018433\|Ga0066667_10169346	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1567	Open in IMG/M
3300018482\|Ga0066669_12042410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300019789\|Ga0137408_1182846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2952	Open in IMG/M
3300026297\|Ga0209237_1147360	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300026298\|Ga0209236_1029548	All Organisms → cellular organisms → Bacteria	2946	Open in IMG/M
3300026313\|Ga0209761_1157998	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300026314\|Ga0209268_1012560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3338	Open in IMG/M
3300026324\|Ga0209470_1072451	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300026326\|Ga0209801_1173467	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300026328\|Ga0209802_1044008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2251	Open in IMG/M
3300026329\|Ga0209375_1024731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3364	Open in IMG/M
3300026330\|Ga0209473_1271687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300026332\|Ga0209803_1057240	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300026343\|Ga0209159_1003938	All Organisms → cellular organisms → Bacteria	9770	Open in IMG/M
3300026537\|Ga0209157_1030318	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3139	Open in IMG/M
3300026538\|Ga0209056_10051164	All Organisms → cellular organisms → Bacteria	3697	Open in IMG/M
3300026538\|Ga0209056_10428989	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300026548\|Ga0209161_10191242	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300026550\|Ga0209474_10433008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300027903\|Ga0209488_11018396	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031754\|Ga0307475_10088120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2403	Open in IMG/M
3300032180\|Ga0307471_100057930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3248	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.03%
Loam	Environmental → Terrestrial → Soil → Loam	2.97%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	56.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	45.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_100758252	3300002560	Grasslands Soil	RELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV
JGI25384J37096_100318801	3300002561	Grasslands Soil	MAGGRQPRTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
JGI25382J43887_100223524	3300002908	Grasslands Soil	MAEGRQPRTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
Ga0066674_100030312	3300005166	Soil	VLRELEHSLRNQLWALTMRPDLPVEQVEKLRAELRDRLDTTQKRLADLSLRLRERRGRSGDG*
Ga0066683_105696892	3300005172	Soil	MAGGRQPRTSPTEESVLRELEHSLRNQLWALTMRRDLPVEQIEKLGAELRDRLDTTQKRLADLSRGPRVGRGRPGDV*
Ga0066683_107491742	3300005172	Soil	MAGGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG*
Ga0066680_100079994	3300005174	Soil	VLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
Ga0066673_100959611	3300005175	Soil	MAGGQQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSPGPRGRRGRSGDG*
Ga0066690_107045822	3300005177	Soil	MAGGQQPRTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGDV*
Ga0066688_101252472	3300005178	Soil	MAGGQQPRTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLRAELRDRLDTTQKRLADLSRGP*
Ga0066684_100475632	3300005179	Soil	VLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSPGPRGRRGRSGDG*
Ga0066685_101581742	3300005180	Soil	GRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG*
Ga0066685_109779402	3300005180	Soil	MAEGRQPRTSPTEESVLRELEHSLRNQLWALTMRADLPVDELEKVRGELRDRLATTQKRLADLGRGRRERGGHSGDA*
Ga0066678_100938182	3300005181	Soil	MAEGRQPGTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGDV*
Ga0066676_104247921	3300005186	Soil	MAGGRQPRTGPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRSGDG*
Ga0066676_106172372	3300005186	Soil	MAGGQQPRTSPTEESALRELEHSLRNQLWALTMRPDLPVEQVEKLRAELRDRLDTTQKRLADLSRGP*
Ga0066675_100962571	3300005187	Soil	MAEGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG*
Ga0070708_1011665952	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAGGRQPRTGPTEESVLRELEHSLRNQLWALTMRPDLPVEQAEKLRAELRDRLDTTQKRLADLSRGPRDDRGRSGDV*
Ga0066689_105213702	3300005447	Soil	MAGGRQPSTSPTEESVLRELEHSLRNQLWALTMRADLPVDEVEKVRGELRDRLATTQNRLADLGRGRRERGGRSGDA*
Ga0066689_105967142	3300005447	Soil	MAEGRQPRTSPTEESVLRELEHSLRNQLWALTMRADLPVDELEKVRGELRDRLATTQQRLADLGRGRRERGGHSGDA*
Ga0070697_1002316191	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAEGRQPRTGPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRSGDV*
Ga0066697_100876952	3300005540	Soil	VLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG*
Ga0066701_100585792	3300005552	Soil	MAEGRQPGTSPTEESVLRELEHSLRNQLWALMMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
Ga0066695_100454772	3300005553	Soil	VLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRSGDG*
Ga0066661_101579281	3300005554	Soil	LWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG*
Ga0066661_102161942	3300005554	Soil	TYSLGSMAGGRQPSTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLAALSREPREGGGRPGDV*
Ga0066707_105810602	3300005556	Soil	LRELEHSLRNQLWALTMRADLPLDEVEKVRAELRDRLATTQKRLADLSLAERRGRSGDG*
Ga0066707_106767342	3300005556	Soil	LRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSLGPREGKGRPGDV*
Ga0066700_106534672	3300005559	Soil	MAGGRQPRTGPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG*
Ga0066699_107263112	3300005561	Soil	MAEGRQPGTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDATQKRLADLNRGPREGRGRPGDV*
Ga0066708_104400532	3300005576	Soil	LRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG*
Ga0066691_109067001	3300005586	Soil	MAGGRQPRAGPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
Ga0066654_103985771	3300005587	Soil	VLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLDTTQKRLADLSLGPRERRGRSGDG*
Ga0066706_100527224	3300005598	Soil	VLRELEHSLRNQLWALTMRADLPVDELEKVRGELRDRLATTQQRLADLGRGRRERGGHSGDA*
Ga0066706_100761893	3300005598	Soil	MAEGRQPGTSPTEESVLRELEHTLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGDV*
Ga0066696_100399861	3300006032	Soil	MAEGRQPRTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLRAELRDRLDTTQKRLADLSRGP*
Ga0066653_101177512	3300006791	Soil	PTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRSGDG*
Ga0066665_106907942	3300006796	Soil	MADGRQPRTSPTEEALLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGDV*
Ga0066659_100702953	3300006797	Soil	MAEGRQPGTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
Ga0099794_100408062	3300007265	Vadose Zone Soil	MTGGRTSQTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGDV*
Ga0066710_1011593431	3300009012	Grasslands Soil	MAEGRQPRTSPTEESVLRELEHSLRNQLWALTMRADLPVDELDKVRGELRDRLATTQQRLADLGRGRRERGGHSGDA
Ga0099830_116461562	3300009088	Vadose Zone Soil	MAGGQQPKTRGTEESELRELEHSLRNQLWALTMRPDLPGEQAEKLGAELRDRLDATQKRLADLSRGPREGRGRSGDV*
Ga0066709_1008995372	3300009137	Grasslands Soil	MAEGRQPRTSPTEESVLRELEHSLRNQLWALTMRADLPVDELDKVRGELRDRLATTQQRLADLGRGRRERGGHSGDA*
Ga0099792_110637961	3300009143	Vadose Zone Soil	AVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGGV*
Ga0134070_100158113	3300010301	Grasslands Soil	MAEGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRSGDG*
Ga0134088_101524992	3300010304	Grasslands Soil	MAGGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEQVEKLRAELRDRLDTTQKRLADLSLGERRGRSGDG*
Ga0134080_103471212	3300010333	Grasslands Soil	EESVLRELEHSLRNQLWALTMRRDLPVEQVEKLGAELRDRLDTTQKRLADLSLGPREGKGRPGDV*
Ga0134063_100568081	3300010335	Grasslands Soil	MAGGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLGRGRRERGGHSGDA*
Ga0134071_101435021	3300010336	Grasslands Soil	MASPSRTDEAVLRELEHSLRNQLWALTMRPDLSVEQVEKLRAELRQQLTATQKRLADLDRRPRGGGGPSGDL*
Ga0137392_111760202	3300011269	Vadose Zone Soil	MAGGQQPKTRGTEESELRELEHSLRNQLWALTMRPDLPGEQAEKLGAELRDRLDTTQKRLADLSRGPREGRGRSGDV*
Ga0137391_103068112	3300011270	Vadose Zone Soil	MAGARQPRTGPTEESVLRELEHSLRNQLWALTMRADLPVEQAEKLGAELRDRLDTTQKRLAHLSRGPREGRGRPGDV*
Ga0137393_114640552	3300011271	Vadose Zone Soil	MTGGRTSQTEESVLRELEHSLRNQLWALTMRPDLPVEQAEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGD
Ga0137389_100346915	3300012096	Vadose Zone Soil	MAGPGQPRTGPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRSGDV*
Ga0137364_105047852	3300012198	Vadose Zone Soil	MGEGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRSGDG*
Ga0137383_100692974	3300012199	Vadose Zone Soil	MAEGRQPRTSPTEEAVLRELEHSLRNQLWALTMRADLPLDEVEKVRAELRDRLATTQKRLADLSLAERRGRPGDG*
Ga0137363_103532152	3300012202	Vadose Zone Soil	MAGGRQPSTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
Ga0137380_103505053	3300012206	Vadose Zone Soil	MAEGRQPRTSPTEESVLRELEHSLRNQLWALTMRTDLPVEQVEKVRAELRDRLATTQERLGDLSREPRGRKGRSDDV*
Ga0137381_100990352	3300012207	Vadose Zone Soil	MRPDLPVEEVEKLRAELRDRLATTQKRLADLSLAERGGRSGDG*
Ga0137376_103086022	3300012208	Vadose Zone Soil	MAGGRQPRAGPTEESVLRELEHSLRNQLWALMMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
Ga0137379_105333592	3300012209	Vadose Zone Soil	MAEGRQPTTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLAERRGRSGDG*
Ga0137378_118625761	3300012210	Vadose Zone Soil	MAGGRQPRTGPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKRRAELRDRLATTQKRLADLSLGPRERRGRSGDG*
Ga0137386_110724631	3300012351	Vadose Zone Soil	PTEASVLRELEHSLRNQLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRSGDG*
Ga0137371_101681702	3300012356	Vadose Zone Soil	MAGGRQPRTGPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRLGDG*
Ga0137371_108015912	3300012356	Vadose Zone Soil	MARGRQPRTSPTEESVLRELEHSLRNQLWALTMRRDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGKGRPGDV*
Ga0137385_103512562	3300012359	Vadose Zone Soil	MADGRQPRTSPTEEAVLRELEHSLRNQLWALTMRADLPLDEVEKVRAELRDRLARTQKRLADLSLAER
Ga0137360_117131442	3300012361	Vadose Zone Soil	TEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
Ga0137361_110370162	3300012362	Vadose Zone Soil	VLRELEHSLRNQLWALTMRPDIPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV*
Ga0137390_1001243413	3300012363	Vadose Zone Soil	MAGPRQPRTGPTEESVLRELEHSLRNQLWALTMRADLPVEQAEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGDV*
Ga0137358_110149082	3300012582	Vadose Zone Soil	GRQPRTSPTEESVLRELEHSLRNQLWALTMRADLPVEEVEKLGAGLRDRLATTQKRLADLGR*
Ga0137416_107514582	3300012927	Vadose Zone Soil	MAGARQPRTGPTEESALRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPG
Ga0137410_104394521	3300012944	Vadose Zone Soil	MAEGRQPRTSPTEESVLRELEHSLRNQLWALTMRADLPLDEVEKVRAELRDRLATTQKRLADLSLG*
Ga0134076_101075682	3300012976	Grasslands Soil	LRNQLWALTMRPDLPVEQVEKLRAELRDRLDTTQKRLADLSLGPREGKGRPGDV*
Ga0134087_100803832	3300012977	Grasslands Soil	MAGGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLDTTQKRLADLSRGP*
Ga0134075_101539792	3300014154	Grasslands Soil	YSLGSMAGGRQPRTSPTEESVLRELEHSLRNQLWALTMRRDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPRVGRGRPGDV*
Ga0137403_100094129	3300015264	Vadose Zone Soil	MADGRQPRTSPTEESVLRELEHSLRNQLWALTMRADLPLDEVEKVRAELRDRLATTQKRLADLSRGPRERTGRSGDG*
Ga0134089_100453012	3300015358	Grasslands Soil	VLRELEHSLRNQLWALTMRRDLPVEQVEKLGAELRDRLDTTQKRLADLSLGPREGKGRPGDV*
Ga0134112_100174932	3300017656	Grasslands Soil	MAGGRQPRTSPTEASVLRELEHSLRNQLWALTMRPDLPVEQVEKLRAELRDRLDTTQKRLADLSRGP
Ga0134074_10066044	3300017657	Grasslands Soil	MAGGRQPRTGPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRSGDG
Ga0066655_106661082	3300018431	Grasslands Soil	MAGGQQPRTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLRAELRDRLDTTQKRLADLSRGP
Ga0066667_101693461	3300018433	Grasslands Soil	MAGGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG
Ga0066669_120424101	3300018482	Grasslands Soil	AEGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRGRRGRSGDG
Ga0137408_11828463	3300019789	Vadose Zone Soil	MADGRQPRTSPTEESVLRELEHSLRNQLWALTMRADLPLDEVEKVRAELRDRLATTQKRLADLSRGPRERTGRSGDG
Ga0209237_11473602	3300026297	Grasslands Soil	MAEGRQPRTGPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV
Ga0209236_10295485	3300026298	Grasslands Soil	MAEGRQPGTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV
Ga0209761_11579982	3300026313	Grasslands Soil	MAGGRQPRTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV
Ga0209268_10125602	3300026314	Soil	MAEGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG
Ga0209470_10724511	3300026324	Soil	MAGGRQPRTSPTEESVLRELEHSLRNQLWALTMRRDLPVEQIEKLGAELRDRLDTTQKRLADLSRGPRVGRGRPGDV
Ga0209801_11734672	3300026326	Soil	MAEGRQPGTSPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGDV
Ga0209802_10440083	3300026328	Soil	MAGGRQPRAGPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV
Ga0209375_10247316	3300026329	Soil	EHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRSGDG
Ga0209473_12716871	3300026330	Soil	MAEGRQPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRGRRGRSGDG
Ga0209803_10572402	3300026332	Soil	MAEGRQPGTSPTEESVLRELEHSLRNQLWALMMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGGGRPGDV
Ga0209159_10039384	3300026343	Soil	VLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLRLRERRGRSGDG
Ga0209157_10303183	3300026537	Soil	VLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG
Ga0209056_100511642	3300026538	Soil	MAGGRQPRTGPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG
Ga0209056_104289892	3300026538	Soil	MADGRQPRTSPTEEALLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGDV
Ga0209161_101912422	3300026548	Soil	MAEGRQPRTSPTEESVLRELEHSLRNQLWALTMRADLPVDELEKVRGELRDRLATTQQRLADLGRGRRERGGHSGDA
Ga0209474_104330082	3300026550	Soil	QPRTSPTEESVLRELEHSLRNRLWALTMRPDLPVEEVEKLRAELRDRLATTQKRLADLSLGPRERRGRSGDG
Ga0209488_110183962	3300027903	Vadose Zone Soil	RQPRTGPTEESVLRELEHSLRNQLWALTMRPDLPVEQVEKLGAELRDRLDTTQKRLADLSRGPREGRGRPGGV
Ga0307475_100881206	3300031754	Hardwood Forest Soil	MARGRQPKTRATEESLLREQEHSLRNELFALTMRTDLPVEEVEKLRAELRGRLATTQARLADLSRRARGAGGRSSEV
Ga0307471_1000579303	3300032180	Hardwood Forest Soil	MAGARQPRTGPTEESALRELEHSLRNQLWALTMRPDLPVEQAEKLGAELRNRLDTTQKRLADLSRGPREGRGRPGDV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103000

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences