Metagenome Family F103077

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103077
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	65 residues
Representative Sequence	MPSVFSIKQDIIRASQEYYDAISKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINREETR
Number of Associated Samples	63
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.20 %
% of genes near scaffold ends (potentially truncated)	30.69 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (87.129 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean (47.525 % of family members)
Environment Ontology (ENVO)	Unclassified (99.010 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 91.18% β-sheet: 0.00% Coil/Unstructured: 8.82%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF03237	Terminase_6N	4.00
PF13392	HNH_3	2.00

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.13 %
All Organisms	root	All Organisms	12.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.13 %
Viruses	superkingdom	All Organisms → Viruses	8.91 %
cellular organisms	root	All Organisms → cellular organisms	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005398\|Ga0066858_10066344	Not Available	1059	Open in IMG/M
3300005400\|Ga0066867_10235968	Not Available	664	Open in IMG/M
3300005520\|Ga0066864_10077204	Not Available	978	Open in IMG/M
3300005595\|Ga0066833_10159117	Not Available	620	Open in IMG/M
3300006736\|Ga0098033_1030334	Not Available	1642	Open in IMG/M
3300006738\|Ga0098035_1045069	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300006750\|Ga0098058_1108113	Not Available	749	Open in IMG/M
3300006750\|Ga0098058_1167869	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006753\|Ga0098039_1118179	Not Available	910	Open in IMG/M
3300006753\|Ga0098039_1225751	Not Available	632	Open in IMG/M
3300006753\|Ga0098039_1225751	Not Available	632	Open in IMG/M
3300006753\|Ga0098039_1236683	Not Available	615	Open in IMG/M
3300006793\|Ga0098055_1301041	Not Available	599	Open in IMG/M
3300006926\|Ga0098057_1091857	Not Available	740	Open in IMG/M
3300006926\|Ga0098057_1135455	Not Available	601	Open in IMG/M
3300006926\|Ga0098057_1168767	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300006927\|Ga0098034_1055543	All Organisms → Viruses → Predicted Viral	1163	Open in IMG/M
3300006929\|Ga0098036_1014464	Not Available	2525	Open in IMG/M
3300007963\|Ga0110931_1145401	Not Available	712	Open in IMG/M
3300008050\|Ga0098052_1326195	Not Available	577	Open in IMG/M
3300008050\|Ga0098052_1383458	Not Available	524	Open in IMG/M
3300008216\|Ga0114898_1008423	Not Available	4178	Open in IMG/M
3300008216\|Ga0114898_1053504	Not Available	1281	Open in IMG/M
3300008216\|Ga0114898_1054496	Not Available	1267	Open in IMG/M
3300008216\|Ga0114898_1089323	Not Available	932	Open in IMG/M
3300008217\|Ga0114899_1069527	Not Available	1222	Open in IMG/M
3300008217\|Ga0114899_1187715	Not Available	660	Open in IMG/M
3300008218\|Ga0114904_1031558	Not Available	1471	Open in IMG/M
3300008218\|Ga0114904_1061171	Not Available	964	Open in IMG/M
3300008218\|Ga0114904_1148555	Not Available	550	Open in IMG/M
3300008219\|Ga0114905_1115989	Not Available	916	Open in IMG/M
3300008219\|Ga0114905_1245608	Not Available	565	Open in IMG/M
3300008220\|Ga0114910_1191512	Not Available	567	Open in IMG/M
3300009412\|Ga0114903_1090457	Not Available	683	Open in IMG/M
3300009412\|Ga0114903_1117961	Not Available	584	Open in IMG/M
3300009413\|Ga0114902_1051241	Not Available	1196	Open in IMG/M
3300009413\|Ga0114902_1183011	Not Available	515	Open in IMG/M
3300009414\|Ga0114909_1186335	Not Available	533	Open in IMG/M
3300009418\|Ga0114908_1035159	Not Available	1870	Open in IMG/M
3300009418\|Ga0114908_1083755	Not Available	1086	Open in IMG/M
3300009418\|Ga0114908_1144543	Not Available	767	Open in IMG/M
3300009602\|Ga0114900_1188929	Not Available	510	Open in IMG/M
3300009603\|Ga0114911_1051390	Not Available	1278	Open in IMG/M
3300009603\|Ga0114911_1068802	All Organisms → Viruses → Predicted Viral	1069	Open in IMG/M
3300009603\|Ga0114911_1130875	Not Available	714	Open in IMG/M
3300009604\|Ga0114901_1030617	Not Available	1998	Open in IMG/M
3300009605\|Ga0114906_1280847	Not Available	534	Open in IMG/M
3300009620\|Ga0114912_1129043	Not Available	596	Open in IMG/M
3300009620\|Ga0114912_1151573	Not Available	541	Open in IMG/M
3300010151\|Ga0098061_1025055	Not Available	2430	Open in IMG/M
3300010153\|Ga0098059_1091751	Not Available	1208	Open in IMG/M
3300010155\|Ga0098047_10053944	Not Available	1587	Open in IMG/M
3300010155\|Ga0098047_10126587	Not Available	993	Open in IMG/M
3300010155\|Ga0098047_10221337	Not Available	722	Open in IMG/M
3300017702\|Ga0181374_1011176	Not Available	1629	Open in IMG/M
3300017703\|Ga0181367_1018550	All Organisms → Viruses → Predicted Viral	1267	Open in IMG/M
3300017775\|Ga0181432_1024826	Not Available	1574	Open in IMG/M
3300017775\|Ga0181432_1068445	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300017775\|Ga0181432_1217582	Not Available	600	Open in IMG/M
3300017775\|Ga0181432_1293220	Not Available	516	Open in IMG/M
3300021791\|Ga0226832_10090665	Not Available	1105	Open in IMG/M
3300022225\|Ga0187833_10192852	Not Available	1204	Open in IMG/M
3300022227\|Ga0187827_10024562	Not Available	5409	Open in IMG/M
3300025042\|Ga0207889_1027761	Not Available	533	Open in IMG/M
3300025044\|Ga0207891_1036465	Not Available	589	Open in IMG/M
3300025046\|Ga0207902_1010914	Not Available	986	Open in IMG/M
3300025046\|Ga0207902_1016265	Not Available	851	Open in IMG/M
3300025069\|Ga0207887_1032493	Not Available	840	Open in IMG/M
3300025069\|Ga0207887_1067106	Not Available	586	Open in IMG/M
3300025072\|Ga0208920_1010165	All Organisms → Viruses → Predicted Viral	2122	Open in IMG/M
3300025096\|Ga0208011_1033817	All Organisms → Viruses → Predicted Viral	1242	Open in IMG/M
3300025114\|Ga0208433_1074853	Not Available	867	Open in IMG/M
3300025125\|Ga0209644_1118348	Not Available	630	Open in IMG/M
3300025128\|Ga0208919_1033999	Not Available	1829	Open in IMG/M
3300025131\|Ga0209128_1017198	Not Available	3263	Open in IMG/M
3300025241\|Ga0207893_1010991	All Organisms → Viruses → Predicted Viral	1230	Open in IMG/M
3300025248\|Ga0207904_1058633	Not Available	642	Open in IMG/M
3300025251\|Ga0208182_1016131	Not Available	1936	Open in IMG/M
3300025264\|Ga0208029_1044188	Not Available	963	Open in IMG/M
3300025264\|Ga0208029_1098351	Not Available	533	Open in IMG/M
3300025267\|Ga0208179_1052430	Not Available	915	Open in IMG/M
3300025267\|Ga0208179_1054316	Not Available	892	Open in IMG/M
3300025267\|Ga0208179_1098635	Not Available	579	Open in IMG/M
3300025267\|Ga0208179_1118890	Not Available	503	Open in IMG/M
3300025270\|Ga0208813_1054944	Not Available	870	Open in IMG/M
3300025280\|Ga0208449_1002023	All Organisms → cellular organisms → Bacteria	10105	Open in IMG/M
3300025281\|Ga0207881_1044555	Not Available	719	Open in IMG/M
3300025282\|Ga0208030_1063310	Not Available	1012	Open in IMG/M
3300025282\|Ga0208030_1083469	Not Available	834	Open in IMG/M
3300025286\|Ga0208315_1045932	Not Available	1179	Open in IMG/M
3300025286\|Ga0208315_1156722	Not Available	504	Open in IMG/M
3300025293\|Ga0208934_1094974	Not Available	511	Open in IMG/M
3300025300\|Ga0208181_1039226	Not Available	1024	Open in IMG/M
3300025300\|Ga0208181_1061142	Not Available	762	Open in IMG/M
3300025305\|Ga0208684_1065439	Not Available	962	Open in IMG/M
3300025873\|Ga0209757_10118656	Not Available	817	Open in IMG/M
3300032278\|Ga0310345_10380536	All Organisms → Viruses → Predicted Viral	1327	Open in IMG/M
3300032820\|Ga0310342_100093364	Not Available	2756	Open in IMG/M
3300032820\|Ga0310342_100618429	Not Available	1230	Open in IMG/M
3300032820\|Ga0310342_100939647	All Organisms → Viruses → Predicted Viral	1010	Open in IMG/M
3300032820\|Ga0310342_101208199	Not Available	894	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	95.05%
Strait	Environmental → Aquatic → Marine → Strait	3.96%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	95.05%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.96%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.99%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	47.52%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	40.59%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.93%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.96%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005520	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251	Environmental	Open in IMG/M
3300005595	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025042	Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)	Environmental	Open in IMG/M
3300025044	Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)	Environmental	Open in IMG/M
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025241	Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)	Environmental	Open in IMG/M
3300025248	Marine viral communities from the Deep Pacific Ocean - MSP-118 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025270	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025281	Marine viral communities from the Deep Pacific Ocean - MSP-97 (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental	Open in IMG/M
3300025293	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066858_100663444	3300005398	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHKFRHSHKKDYELVEQMIKNINRGETA*
Ga0066867_102359683	3300005400	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHKFRHSHKKDYELVEQMIK
Ga0066864_100772043	3300005520	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINRGETT*
Ga0066833_101591172	3300005595	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINRGKTA*
Ga0098033_10303343	3300006736	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINRGETA*
Ga0098035_10450694	3300006738	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNSIKKFHKFRHSHKKDYELVEQMIKNINRGETA*
Ga0098058_11081131	3300006750	Marine	RMPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNSIKKFHKFRHSHKKDYELVEQMIKNINRGETA*
Ga0098058_11678691	3300006750	Marine	SQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINRGETT*
Ga0098039_11181794	3300006753	Marine	MSNVFSIKQDIIKASQAYYDSISTEDKEKSKENLKKQFKKLHWFRHSHKKDYKYAEKIIRNII*
Ga0098039_12257512	3300006753	Marine	MPSVFSIKQDIIRASQEYYDAISKEDKSKSKEHLQNTIRKFHPFRHSHKKDYELVEQMIKNINREETR*
Ga0098039_12257513	3300006753	Marine	HGRRRMPNVFSIKQDIIRASQEYYDAMSKEDKSRSKEHLQNTIRKFHKFRYSHKKDYKFIEQMIKNINRGEYKWH*
Ga0098039_12366833	3300006753	Marine	MPSVFSIKQDIIKASQEYYDAISTEDKNKSKEHLQNTIKKFHRFRHSHKKDYE
Ga0098055_13010412	3300006793	Marine	VFSIKQDIIRASQEYYDAISTKDKNRSKEHLQNTIKKFHKFRHSHKKDYQFIEQMIKNINREETR*
Ga0098057_10918571	3300006926	Marine	PSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHPFRHSHKKDYELVEQMIKNINRGETA*
Ga0098057_11354551	3300006926	Marine	RRRMPSVFSLKEDIIKESQAYYDAISKKDKEKSKENLQKQFKKFHWFRHSHKKDYENIEKIIRNII*
Ga0098057_11687673	3300006926	Marine	PSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINRGETT*
Ga0098034_10555433	3300006927	Marine	VFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINRGETA*
Ga0098036_10144642	3300006929	Marine	MPSVFSIKQDIIKASQDYYDAVSTEDKDKSKEHLQNTIKKFHKFRYSHKKDYQFIERMIKNINKGESK*
Ga0110931_11454012	3300007963	Marine	VFSIKQDIIKASQDYYDAVSTEDKDKSKEHLQNTIKKFHKFRYSHKKDYQFIERMIKNINKGESK*
Ga0098052_13261952	3300008050	Marine	VFSIKQDIIKASQEYYDAISTEDKNRSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINREETR*
Ga0098052_13834581	3300008050	Marine	VFSIKQDIIKASQNYYDAVSTEDKNRSKEHLQNTIKKFHKFRYSHKKDYEFIERMIKNINRGEYK*
Ga0114898_10084231	3300008216	Deep Ocean	MPSVFSIKQDIIKASQEYYDAISKEDKGKSKEHLQNTIKKFHKFRHSHKKDYQFIEQMIKNINREEIR*
Ga0114898_10535042	3300008216	Deep Ocean	VFSIKQDIIKASQEYYDAISTKDKNRSKEYLQNTIKKFHKFRHSHKKDYQFIEQMIKNINRGETR*
Ga0114898_10544962	3300008216	Deep Ocean	VFSIKQDIIKASQAYYDASPEDRDKSKEYLQNSIKKFHKFRHSHKKDYQFIEQMIKNINKGESK*
Ga0114898_10893231	3300008216	Deep Ocean	DYRRRRMPSVFSIKQDIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHRFRHSHKKDYQFIEQMIKNINREEIR*
Ga0114899_10695273	3300008217	Deep Ocean	VFSIKQDIIKESQAYYDAVSKEDKDKSRENLQKQFKKFHWFRHSHKKDYENIEKIIRNIL
Ga0114899_11877151	3300008217	Deep Ocean	QWHGRRRMPSVFSIKQDIIKASQEYYDAISTKDKSKSKEHLQNTIKKFHRFRHSHKKDYQSIEQMIKNINREEIR*
Ga0114904_10315583	3300008218	Deep Ocean	VFSIKQDIIRASQEYYDAISTKDKNRSKEYLQNTIKKFHKFRHSHKKDYQFIEQMIKNINRGETR*
Ga0114904_10611714	3300008218	Deep Ocean	VFSIKQDIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHRFRHSHKKDYQFIEQMIKNINREEIR*
Ga0114904_11485551	3300008218	Deep Ocean	RRRMPSVFSIKQDIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHPFRHSHKKDYELVEQMIKNINREETR*
Ga0114905_11159894	3300008219	Deep Ocean	VFSIKQDIIKASQEYYDAISTKDKSKSKEHLQNTIKKFHRFRHSHKKDYQSIEQMIKNINREEIR*
Ga0114905_12456082	3300008219	Deep Ocean	VFSIKQDIIRASQEYYDAISKEDKSKSKEHLQNTIKKFHKFRHSHKKDYQFIEQMIKNINREETR*
Ga0114910_11915123	3300008220	Deep Ocean	ASQEYYDAISKEDKNKSKEHLQNTIKKFHRFRHSHKKDYQFIEQMIKNINREEIR*
Ga0114903_10904571	3300009412	Deep Ocean	QDIIKASQAYYDAVSKEDKDKSRENLQKQFKKFHWFRHSHKKDYENIEKIIRNII*
Ga0114903_11179612	3300009412	Deep Ocean	VFSIKQDIIKASQEYYDAISTKDKNRSKEHLQNTIKKFHPFRHSHKKDYELVEQMIKNINREETR*
Ga0114902_10512415	3300009413	Deep Ocean	ASQEYYDAISKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINREETR*
Ga0114902_11830111	3300009413	Deep Ocean	MPSVFSIKQDIIKESQAYYDAVSKEDKDKSRENLQKQFKKFHWFRHSHKKDYENIEKIIRNII*
Ga0114909_11863351	3300009414	Deep Ocean	MPSVFSIKQDIIKASQEYYDAISKEDKNKSKEHLQNTIKKFHPFRHSHKKDYELVEQMIKNINREEIR*
Ga0114908_10351591	3300009418	Deep Ocean	VFSIKQDIIKASQAYYDASPEDRDKSKEYLQNSIKKFHKFRHSHKKDYQFIEQMIKNIN
Ga0114908_10837553	3300009418	Deep Ocean	VFSIKQDIIRASQEYYDAISTKDKNRSKEYLQNTIKKFHKFRHSHKKDYQFIEQMIK
Ga0114908_11445434	3300009418	Deep Ocean	MPSVFSIKQDIIKASQAYYDASPEDKNKSKEYLQNSIKKFHKFRHSHKKDYQFIEQMIKNINKGESK*
Ga0114900_11889292	3300009602	Deep Ocean	VFSIKQDIIKASQAYYDASPEDRDKSKEYLQNSIKKFHKFRHSHKKDYQFIEQMIKNINRGETR*
Ga0114911_10513903	3300009603	Deep Ocean	VFSIKQDIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHRFRHIHKKDYQFIEQMIKNINREEIR*
Ga0114911_10688022	3300009603	Deep Ocean	VFSIKQDIIKASQEYYDAISKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINREETR*
Ga0114911_11308751	3300009603	Deep Ocean	VFSIKQNIIKESQAYYDAVSKEDKDKSRENLQKQFKKFHWFRHRHKKDYENIEKIIRNI
Ga0114901_10306174	3300009604	Deep Ocean	VFSIKQDIIRAGQEYYDAISKEDKNRSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINREETR*
Ga0114906_12808471	3300009605	Deep Ocean	MPSVFSIKQDIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINREETR*
Ga0114912_11290431	3300009620	Deep Ocean	VFSIKQDIIKASQEYYDAISTKDKNRSKEYLQNTIKKFHKFRHSHKKDYQFIEQM
Ga0114912_11515733	3300009620	Deep Ocean	DIIKASQEYYDAISKEDKNKSKEHLQNTIKKFHRFRHSHKKDYQSIEQMIKNINREEIR*
Ga0098061_10250553	3300010151	Marine	VFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNSIKKFHKFRHSHKKDYELVEQMIKNINRGETA*
Ga0098059_10917513	3300010153	Marine	VFSIKQDIIKASQDYYDASPEDKDKSKEYLQNTIKKFHKFRYSHKKDYQFIERMIKNINKGESK*
Ga0098047_100539443	3300010155	Marine	VFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVERMIKNINRGETA*
Ga0098047_101265873	3300010155	Marine	VFSIKQDIIKASQEYYDAISKEDKNRSKEHLQNTIKKFHKFRRSHKKDYQFIEQMIKNINREV*
Ga0098047_102213371	3300010155	Marine	MPSVFSLKEDIIKESQAYYDAISKEDKEKSKENLQKQFKKFHWFRHSHKKDYENIEKIIRNIV*
Ga0181374_10111765	3300017702	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINRGETAXNMESWDTWLK
Ga0181367_10185502	3300017703	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSQKKDYELVEQMIKNINREV
Ga0181432_10248264	3300017775	Seawater	VFSIKQDIIKASQGYYDAISTKDKDKSKEYLQNTIKKFHKFRYSHKKDYKLIEQMIKNINREETT
Ga0181432_10684452	3300017775	Seawater	MPSVFSIKQDIIRASQEYYDAISKEDKNKSKEHLQNTIKKFHPFRNSHKKDYELVEKMIKNINRGETI
Ga0181432_12175822	3300017775	Seawater	MPNVFSIKQDIIRASQEYYDAISKEDKNRSKEHLQNTIKKFHPFRHSHKKDYEFVEQMIKNINRGETT
Ga0181432_12932202	3300017775	Seawater	MPSVFSIKQDIIKASQNYYDAISTEDKNKSKEHLQNTIRKFHKFRYSHKKDYEFIEQMIKNINRGEYK
Ga0226832_100906653	3300021791	Hydrothermal Vent Fluids	MPSVFSIKQDIIKASQAYYDAISTKDKDKSKEYLQNSIKKFHKFRYSHKKDYQFIEQMIKNINRGE
Ga0187833_101928522	3300022225	Seawater	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINRGETT
Ga0187827_100245625	3300022227	Seawater	VFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINRGETA
Ga0207889_10277613	3300025042	Marine	MPNVFSVKQDIIRASQEYYDAISKEDKNRSKEHLQNTIKKFHPFRNSHKKDYELVEQMIKNINREV
Ga0207891_10364652	3300025044	Marine	MPSVFSIKQDIIRASQEYYDAISKEDKNRSKEHLQNTIKKFHPFRHSHKKDYELVEQMIKNINREETR
Ga0207902_10109145	3300025046	Marine	IIKASQAYYDAISTEDKNKSKEYLQNTIKKFHPFRRSHKKDYKFVGKMIKNINREETT
Ga0207902_10162652	3300025046	Marine	VFSVKQDIIRASQEYYDAISKEDKNRSKEHLQNTIKKFHPFRHSHKKDYELVEQMIKNINREETR
Ga0207887_10324934	3300025069	Marine	MPSVFSIKQDIIKASQEYYDAISTEDRNRSKEYLQDTIKKFHKFRHSHKKDYQFIEQMIKNINRGETT
Ga0207887_10671062	3300025069	Marine	PSVFSIKQDIIKESQAYYDAISTKDKEKSKENLQKQFKRFHWFRHSHKKDYENIEKIIRNII
Ga0208920_10101653	3300025072	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHKFRHSHKKDYELVEQMIKNINRGETA
Ga0208011_10338171	3300025096	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQM
Ga0208433_10748533	3300025114	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNSIKKFHKFRHSHKKDYELVEQMIKNINRGETA
Ga0209644_11183481	3300025125	Marine	MPNVFSIKQDIIRASQAYYDAISTEDKSKSKEYLQNTITKFHPFRRSHKKDYKFVEKMIKNINREEIT
Ga0208919_10339992	3300025128	Marine	MPSVFSIKQDIIKASQDYYDAVSTEDKNKSKEHLQNTIRKFHKFRYSHKKDYQFIERMIKNINKGESK
Ga0209128_10171981	3300025131	Marine	MPSVFSIKQDIIRASQEYYDAVSKEDKNKSKEHLQNTIKKFHPFRHSHKKDYELVERMIKNINRGETA
Ga0207893_10109913	3300025241	Deep Ocean	MPNVFSIKQDIIRASQEYYDAISKEDKNRSKEHLQNTIKKFHPFRHSHKKDYELVEQMIKNINREETI
Ga0207904_10586333	3300025248	Deep Ocean	VFSVKQDIIRASQEYYDAISKEDKNRSKEHLQNTIKKFHPFRHSHKKDYELVEQMIKNINREETI
Ga0208182_10161312	3300025251	Deep Ocean	MPSVFSIKQDIIKASQAYYDASPEDRDKSKEYLQNSIKKFHKFRHSHKKDYQFIEQMIKNINKGESK
Ga0208029_10441881	3300025264	Deep Ocean	MPSVFSIKQDIIKASQAYYDASPEDRDKSKEYLQNSIKKFHKFRHSHKKDYQFIEQMIKNINKGESKXNTEN
Ga0208029_10983512	3300025264	Deep Ocean	MPSVFSIKQDIIRASQEYYDAISKEDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINREETR
Ga0208179_10524302	3300025267	Deep Ocean	MPSVFSIKQDIIKASQAYYDASPEDRDKSKEYLQNSIKKFHKFRHSHKKDYQFIEQMIKNINKG
Ga0208179_10543165	3300025267	Deep Ocean	DIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHRFRHSHKKDYQFIEQMIKNINREEIR
Ga0208179_10986351	3300025267	Deep Ocean	MPSVFSIKQDIIKASQEYYDAISTKDKNRSKEYLQNTIKKFHKFRHSHKKDYQFIEQMIKNINRGETR
Ga0208179_11188902	3300025267	Deep Ocean	MPSVFSIKQDIIRAGQEYYDAISKEDKNRSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINREETR
Ga0208813_10549442	3300025270	Deep Ocean	MPSVFSIKQDIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHRFRHSHKKDYELVEQMIKNINREETR
Ga0208449_100202314	3300025280	Deep Ocean	VFSIKDIIRASQEYYDAISTKDKNRSKEYLQNTIKKFHKFRHSHKKDYQFIEQMIKNINKGESK
Ga0207881_10445551	3300025281	Deep Ocean	MPNVFSIKQDIIRASQEYYDAISKEDKNRSKEHLQNTIKKFHPFRNSHKKDYRFVEQMIRNINKEI
Ga0208030_10633102	3300025282	Deep Ocean	MPSVFSIKQDIIKASQAYYDASPEDRDKSKEYLQNSIKKFHKFRHSHKKDYQFIE
Ga0208030_10834692	3300025282	Deep Ocean	VFSIKQDIIKESQAYYDAVSKEDKDKSRENLQKQFKKFHWFRHSHKKDYENIEKIIRNII
Ga0208315_10459322	3300025286	Deep Ocean	VFSIKQDIIKASQEYYDAISTKDKNRSKEYLQNTIKKFHKFRHSHKKDYQFIEQMIKNINRGETR
Ga0208315_11567221	3300025286	Deep Ocean	RRMPSVFSIKQDIIRASQEYYDAISTEDKNRSKEHLQNTIKKFHPFRHSHKKDYELVEQMIKNINREETR
Ga0208934_10949742	3300025293	Deep Ocean	MPSVFSIKQDIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHRFRHSHKKDYQSIEQMIKNINREEIR
Ga0208181_10392264	3300025300	Deep Ocean	MPSVFSIKQDIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHRFRHSHKKDYQFIEQMIKNINREEIR
Ga0208181_10611421	3300025300	Deep Ocean	MPSVFSIKQDIIKASQAYYDASPEDRDKSKEYLQNSIKKFHKFRHSHKKDYQFIEQMIKNINK
Ga0208684_10654394	3300025305	Deep Ocean	MPSVFSIKQDIIKASQEYYDAISTKDKSKSKEHLQNTIKKFHRFRHSHKKDYQFIEQMIKNINREEIR
Ga0209757_101186563	3300025873	Marine	MPSVFSIKQDIIRASQGYYDAISTEDRNRSKKHLQNTIKKFHPFRRSHKKDYKFVEKMIKNINREEIT
Ga0310345_103805362	3300032278	Seawater	MPSVFSIKQDIIKASQNYYDAISTEDKNKSKEHLQNTIKKFHRFRHSHKKDYQFIEQMIKNINREEIR
Ga0310342_1000933642	3300032820	Seawater	VFSIKQDIIKASQEYYDAISKEDKNKSKEHLQNTIKKFHRFRHSHKKDYQFIEQMIKNINREEIR
Ga0310342_1006184291	3300032820	Seawater	MPSVFSIKQDIIKASQAYYDAVSIEDKKKSKETLQKQFKKFHWFRHSHKKDYENIEKIIRNII
Ga0310342_1009396472	3300032820	Seawater	MPSVFSIKQDIIKASQNYYDAISTEDKNKSKEHLQNTIRKFHKFRYSHKKDYEFIERMIKNINKGESK
Ga0310342_1012081992	3300032820	Seawater	MPSVFSIKQDIIKASQEYYDAISTKDKNKSKEHLQNTIKKFHKFRYSHKKDYQFIERMIKNINRGESK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103077

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences