Metagenome Family F103106

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103106
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	59 residues
Representative Sequence	MSDIKKVIEGLELIETVIPSYKHARRKGLTDDEAETLVNWALEQAIIILEQLIGATDE
Number of Associated Samples	53
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.15 %
% of genes near scaffold ends (potentially truncated)	31.68 %
% of genes from short scaffolds (< 2000 bps)	77.23 %
Associated GOLD sequencing projects	37
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (47.525 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (41.584 % of family members)
Environment Ontology (ENVO)	Unclassified (96.040 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (50.495 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.14% β-sheet: 0.00% Coil/Unstructured: 41.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01555	N6_N4_Mtase	8.91
PF06725	3D	5.94
PF00271	Helicase_C	5.94
PF00145	DNA_methylase	3.96
PF00436	SSB	3.96
PF14359	DUF4406	3.96
PF05014	Nuc_deoxyrib_tr	2.97
PF05869	Dam	2.97
PF01507	PAPS_reduct	2.97
PF09643	YopX	1.98
PF03819	MazG	1.98
PF01695	IstB_IS21	1.98
PF04545	Sigma70_r4	1.98
PF02511	Thy1	0.99
PF13392	HNH_3	0.99
PF00317	Ribonuc_red_lgN	0.99
PF02768	DNA_pol3_beta_3	0.99
PF12323	HTH_OrfB_IS605	0.99
PF02592	Vut_1	0.99
PF02086	MethyltransfD12	0.99
PF14354	Lar_restr_allev	0.99
PF06048	DUF927	0.99
PF02223	Thymidylate_kin	0.99
PF10704	DUF2508	0.99
PF07282	OrfB_Zn_ribbon	0.99
PF16793	RepB_primase	0.99
PF05063	MT-A70	0.99
PF13479	AAA_24	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	8.91
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	8.91
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	8.91
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	3.96
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	3.96
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	3.96
COG3613	Nucleoside 2-deoxyribosyltransferase	Nucleotide transport and metabolism [F]	2.97
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	1.98
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	1.98
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	0.99
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.99
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.99
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.99
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.99
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	0.99
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.99
COG5519	Predicted ATPase domain of Cch-like helicases, DUF927 family	General function prediction only [R]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
cellular organisms	root	All Organisms → cellular organisms	40.59 %
Viruses	superkingdom	All Organisms → Viruses	11.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	33.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	25.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.99 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.99 %
Tissierellia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	16.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
unclassified Clostridia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia	1.98 %
Herelleviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Herelleviridae	0.99 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.99 %
Tissierellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Syntrophomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae	7.92 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	2.97 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1.98 %
Bastillevirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Herelleviridae → Bastillevirinae	0.99 %
Tissierellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Tissierellaceae	0.99 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
unclassified Syntrophomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae	5.94 %
Syntrophomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas	1.98 %
Thermincola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Thermincola	1.98 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1.98 %
Eldridgevirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Herelleviridae → Bastillevirinae → Eldridgevirus	0.99 %
Tepidimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Tissierellaceae → Tepidimicrobium	0.99 %
Pelotomaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Pelotomaculum	0.99 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	5.94 %
Syntrophomonas palmitatica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas palmitatica	1.98 %
Thermincola ferriacetica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Thermincola → Thermincola ferriacetica	1.98 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1.98 %
unclassified Pelotomaculum	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Pelotomaculum → unclassified Pelotomaculum	0.99 %
Tepidimicrobium xylanilyticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Tissierellaceae → Tepidimicrobium → Tepidimicrobium xylanilyticum	0.99 %
Eldridgevirus eldridge	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Herelleviridae → Bastillevirinae → Eldridgevirus → Eldridgevirus eldridge	0.99 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	5.94 %
Syntrophomonas palmitatica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas palmitatica	1.98 %
Thermincola ferriacetica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Thermincola → Thermincola ferriacetica	1.98 %
Clostridia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	1.98 %
Pelotomaculum sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Pelotomaculum → unclassified Pelotomaculum → Pelotomaculum sp.	0.99 %
Tepidimicrobium xylanilyticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Tissierellaceae → Tepidimicrobium → Tepidimicrobium xylanilyticum	0.99 %
Eldridgevirus eldridge	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Herelleviridae → Bastillevirinae → Eldridgevirus → Eldridgevirus eldridge	0.99 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000482\|Lynggard_1013537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1086	Open in IMG/M
3300000510\|Foulum_1012437	All Organisms → Viruses → Predicted Viral	1692	Open in IMG/M
3300002163\|JGI24707J26582_10030501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2300	Open in IMG/M
3300002163\|JGI24707J26582_10036488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas palmitatica	1997	Open in IMG/M
3300002168\|JGI24712J26585_10009036	Not Available	6623	Open in IMG/M
3300002168\|JGI24712J26585_10010931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5790	Open in IMG/M
3300002168\|JGI24712J26585_10088760	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300002170\|JGI24711J26586_10001184	All Organisms → cellular organisms → Bacteria	20302	Open in IMG/M
3300002170\|JGI24711J26586_10008791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas palmitatica	5293	Open in IMG/M
3300002170\|JGI24711J26586_10046367	All Organisms → Viruses → Predicted Viral	1470	Open in IMG/M
3300002173\|JGI24709J26583_10047109	All Organisms → Viruses → Predicted Viral	1766	Open in IMG/M
3300002173\|JGI24709J26583_10062937	Not Available	1384	Open in IMG/M
3300002173\|JGI24709J26583_10183006	Not Available	578	Open in IMG/M
3300002174\|JGI24710J26742_10080221	All Organisms → Viruses → Predicted Viral	1227	Open in IMG/M
3300002174\|JGI24710J26742_10183696	Not Available	613	Open in IMG/M
3300002898\|draft_10112232	Not Available	1871	Open in IMG/M
3300002898\|draft_10257655	Not Available	929	Open in IMG/M
3300002898\|draft_10378452	Not Available	675	Open in IMG/M
3300002898\|draft_10425516	Not Available	612	Open in IMG/M
3300002898\|draft_10455461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	579	Open in IMG/M
3300003667\|LSCM3L_1008320	All Organisms → Viruses → Predicted Viral	2390	Open in IMG/M
3300003667\|LSCM3L_1015816	Not Available	1443	Open in IMG/M
3300003667\|LSCM3L_1024491	Not Available	1025	Open in IMG/M
3300005730\|Ga0076946_109168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1155	Open in IMG/M
3300006674\|Ga0101770_1047296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3443	Open in IMG/M
3300006674\|Ga0101770_1047297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5431	Open in IMG/M
3300006840\|Ga0101790_114577	All Organisms → Viruses → Predicted Viral	1146	Open in IMG/M
3300006840\|Ga0101790_115308	All Organisms → Viruses → Predicted Viral	2126	Open in IMG/M
3300009121\|Ga0118671_1056271	All Organisms → Viruses → Predicted Viral	1102	Open in IMG/M
3300009360\|Ga0118672_1181872	Not Available	501	Open in IMG/M
3300009362\|Ga0118673_1007021	All Organisms → cellular organisms → Bacteria	5139	Open in IMG/M
3300009362\|Ga0118673_1063437	Not Available	1117	Open in IMG/M
3300009607\|Ga0123327_1105378	Not Available	1009	Open in IMG/M
3300009607\|Ga0123327_1137630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	839	Open in IMG/M
3300009642\|Ga0123331_1213505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	577	Open in IMG/M
3300009647\|Ga0123326_1055303	Not Available	1452	Open in IMG/M
3300009647\|Ga0123326_1176165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → unclassified Clostridia → Clostridia bacterium	666	Open in IMG/M
3300009652\|Ga0123330_1339959	Not Available	507	Open in IMG/M
3300009653\|Ga0116169_1197065	Not Available	675	Open in IMG/M
3300009654\|Ga0116167_1131525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	885	Open in IMG/M
3300009657\|Ga0116179_1143226	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300009657\|Ga0116179_1258300	Not Available	573	Open in IMG/M
3300009657\|Ga0116179_1263829	Not Available	565	Open in IMG/M
3300009659\|Ga0123328_1002606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	16128	Open in IMG/M
3300009659\|Ga0123328_1175373	Not Available	826	Open in IMG/M
3300009663\|Ga0116181_1082268	All Organisms → Viruses → Predicted Viral	1337	Open in IMG/M
3300009663\|Ga0116181_1113093	Not Available	1080	Open in IMG/M
3300009668\|Ga0116180_1092040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1317	Open in IMG/M
3300009668\|Ga0116180_1200452	Not Available	778	Open in IMG/M
3300009668\|Ga0116180_1204507	Not Available	768	Open in IMG/M
3300009671\|Ga0123334_1223206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	852	Open in IMG/M
3300009680\|Ga0123335_1359137	Not Available	683	Open in IMG/M
3300009682\|Ga0116172_10344001	Not Available	715	Open in IMG/M
3300009710\|Ga0116192_1024490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2531	Open in IMG/M
3300009710\|Ga0116192_1038156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1876	Open in IMG/M
3300009712\|Ga0116165_1153844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	806	Open in IMG/M
3300009712\|Ga0116165_1235880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Thermincola → Thermincola ferriacetica	604	Open in IMG/M
3300009761\|Ga0116168_1144526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	616	Open in IMG/M
3300010327\|Ga0116246_10077624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1503	Open in IMG/M
3300010327\|Ga0116246_10376516	Not Available	573	Open in IMG/M
3300010338\|Ga0116245_10014011	Not Available	7429	Open in IMG/M
3300010338\|Ga0116245_10098448	Not Available	1743	Open in IMG/M
3300010338\|Ga0116245_10126364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1472	Open in IMG/M
3300010340\|Ga0116250_10066014	Not Available	2520	Open in IMG/M
3300010340\|Ga0116250_10172885	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300010340\|Ga0116250_10191798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1260	Open in IMG/M
3300010340\|Ga0116250_10335242	Not Available	888	Open in IMG/M
3300010340\|Ga0116250_10764738	Not Available	523	Open in IMG/M
3300010348\|Ga0116255_10544337	Not Available	758	Open in IMG/M
3300012949\|Ga0153798_10209414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	694	Open in IMG/M
3300014203\|Ga0172378_11294474	Not Available	513	Open in IMG/M
3300025471\|Ga0209508_1026121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1577	Open in IMG/M
3300025589\|Ga0209409_1063923	Not Available	1020	Open in IMG/M
3300025589\|Ga0209409_1137963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Thermincola → Thermincola ferriacetica	567	Open in IMG/M
3300025597\|Ga0208825_1107432	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300025605\|Ga0209720_1118929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	675	Open in IMG/M
3300025609\|Ga0209608_1004246	Not Available	8168	Open in IMG/M
3300025609\|Ga0209608_1119359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Tissierellaceae → Tepidimicrobium → Tepidimicrobium xylanilyticum	654	Open in IMG/M
3300025618\|Ga0208693_1002324	Not Available	12651	Open in IMG/M
3300025618\|Ga0208693_1021005	Not Available	2795	Open in IMG/M
3300025618\|Ga0208693_1048615	Not Available	1477	Open in IMG/M
3300025631\|Ga0209204_1097826	Not Available	830	Open in IMG/M
3300025657\|Ga0208823_1031181	All Organisms → Viruses → Predicted Viral	2258	Open in IMG/M
3300025657\|Ga0208823_1085157	Not Available	1022	Open in IMG/M
3300025657\|Ga0208823_1166362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	597	Open in IMG/M
3300025683\|Ga0208564_1203655	Not Available	537	Open in IMG/M
3300026194\|Ga0209509_1002499	Not Available	12235	Open in IMG/M
3300026194\|Ga0209509_1012492	Not Available	3226	Open in IMG/M
3300026194\|Ga0209509_1016674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	2538	Open in IMG/M
3300026194\|Ga0209509_1033350	All Organisms → Viruses → Predicted Viral	1482	Open in IMG/M
3300026194\|Ga0209509_1079909	Not Available	789	Open in IMG/M
3300026195\|Ga0209312_1101429	Not Available	737	Open in IMG/M
3300026195\|Ga0209312_1163272	Not Available	516	Open in IMG/M
3300026198\|Ga0209313_1016583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	2278	Open in IMG/M
3300026311\|Ga0209723_1252799	Not Available	610	Open in IMG/M
3300026311\|Ga0209723_1268427	Not Available	583	Open in IMG/M
3300027510\|Ga0209537_1013244	All Organisms → cellular organisms → Bacteria	4607	Open in IMG/M
3300027510\|Ga0209537_1056482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Pelotomaculum → unclassified Pelotomaculum → Pelotomaculum sp.	1159	Open in IMG/M
3300027510\|Ga0209537_1068942	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Herelleviridae → Bastillevirinae → Eldridgevirus → Eldridgevirus eldridge	958	Open in IMG/M
(restricted) 3300028561\|Ga0255343_1182155	Not Available	829	Open in IMG/M
3300033757\|Ga0373404_0137518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	805	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	96.04%
Environmental	Environmental	3.96%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	45.54%
Bioreactor	Engineered → Bioreactor	28.71%
Biotransformation	Engineered → Biotransformation	15.84%
Unclassified	Engineered → Unclassified	4.95%
Aquatic	Environmental → Aquatic	3.96%
Built Environment	Engineered → Built Environment	0.99%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	45.54%
Anaerobic	Engineered → Bioreactor → Anaerobic	22.77%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	15.84%
Unclassified	Engineered → Unclassified → Unclassified	4.95%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	4.95%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Unclassified	Engineered → Bioreactor → Unclassified	0.99%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	45.54%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	22.77%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	15.84%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	4.95%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	4.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.96%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	45.54%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	22.77%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	15.84%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	4.95%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	4.95%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	41.58%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	19.80%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	15.84%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	4.95%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	3.96%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water	2.97%
Food Waste	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Food Waste	2.97%
Anaerobic Digester	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester	1.98%
Anaerobic Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Anaerobic Reactor	1.98%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.99%
Anaerobic Digester Leachate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Leachate	0.99%
Switchgrass Degrading	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading	0.99%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000482	Anaerobic digester microbial communities from Northern Denmark, sample from Lynggard manure	Engineered	Open in IMG/M
3300000510	Anaerobic digester microbial communities from Northern Denmark, sample from Foulum manure	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002174	Biogas fermentation microbial communities from Germany - Plant 2 DNA2	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300003667	Lithgow State Coal Mine Metagenomic Study (LSCM 3 Late (Sample 2))	Environmental	Open in IMG/M
3300005730	Anaerobic microbial community collected from a biogas reactor in Fredrikstad, Norway	Engineered	Open in IMG/M
3300006674	Anaerobic microbial community collected from a biogas reactor in Fredrikstad, Norway. Combined Assembly of Gp0117115, Gp0124038	Engineered	Open in IMG/M
3300006840	Anaerobic bioreactor microbial communities from Canach, Luxembourg	Engineered	Open in IMG/M
3300009121	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.A IDBA	Engineered	Open in IMG/M
3300009360	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.B IBDA	Engineered	Open in IMG/M
3300009362	Syntrophic microbial communities from biogas reactors - R1.C13.But.A IBDA	Engineered	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009642	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA	Engineered	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009652	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA	Engineered	Open in IMG/M
3300009653	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG	Engineered	Open in IMG/M
3300009654	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009659	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA	Engineered	Open in IMG/M
3300009663	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG	Engineered	Open in IMG/M
3300009710	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC113_MetaG	Engineered	Open in IMG/M
3300009712	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG	Engineered	Open in IMG/M
3300009761	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG	Engineered	Open in IMG/M
3300010327	AD_CNMVca	Engineered	Open in IMG/M
3300010338	AD_JPMRca	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010348	AD_HKYLca	Engineered	Open in IMG/M
3300012949	Switchgrass enrichment cultures co-assembly	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300025471	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025589	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025597	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC113_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025605	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025609	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025631	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026194	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026195	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026198	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026311	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028561 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant16	Engineered	Open in IMG/M
3300033757	Leachate microbial community from anaerobic digester in University of Toronto, Ontario, Canada - S62W2 SP	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Lynggard_10135371	3300000482	Anaerobic Digester	MSDIKKVIEGLELIEIVVPSYKHARRKGITDDEAETLVNWALEQAIIILEQLIGATDE*
Foulum_10124371	3300000510	Anaerobic Digester	MSDIKKVIEGLELIETVIPSYKYARRRGLTDDEAETAVDWALEQAIIILEQLIGATEESEGYEQISLKN*
JGI24707J26582_100305014	3300002163	Biogas Fermentantion	MVTKNEALRIKHMIEGLELIETAFPSYKHARRKGMSDDEAETVVNWALEQAIILLEQIMEGKELCL*
JGI24707J26582_100364885	3300002163	Biogas Fermentantion	MYDIKKVIEGLELIETVIPSYKHARHKGITDDEAETVVNWAVEQAIILLEQLLELEQLLEQLIGATDE*
JGI24712J26585_100090364	3300002168	Biogas Fermentantion	MERPPIESIIEGLELIETVIPSYKHARHKGITDDEAETVVNWALEQAIIILEQLRRDMYGRDAK*
JGI24712J26585_1001093111	3300002168	Biogas Fermentantion	MPDIKKVIEGLELIEAVIPSYKHARHKGLTDDEAETLVNQSIEQSIAILETIVARDKQSGTNAKEA*
JGI24712J26585_100887602	3300002168	Biogas Fermentantion	LGGKGLRVMSDIEKIIEGLELIEIVVPSYKHARRKGITDEEAEKLVNQAIEQAINILEQRTIDE*
JGI24711J26586_100011843	3300002170	Biogas Fermentantion	MSDIKKVIEGLELXEIVVPSYKHARRKGITDEEAEXLVNQAIEQAINILEQRTIDE*
JGI24711J26586_100087915	3300002170	Biogas Fermentantion	MYDIKKVIEGLELIETVIPSYKHARHKGITDDEAETVVNWAVEQAIILLEQLLELEXLLEQLIGATDE*
JGI24711J26586_100463673	3300002170	Biogas Fermentantion	MYDIKKVIEGLELIETVVPSYKYARRRGLTDDEAETLVDWALEQAIVLLEQLIGATDD*
JGI24709J26583_100471094	3300002173	Biogas Fermentantion	MDIKKVIEGLELIETVTPSYKHARRRGMTDNEAETVVNWAVEQAIIILEQLIGATDE*
JGI24709J26583_100629372	3300002173	Biogas Fermentantion	MSDIKKVIEGLELIEIVVPSYKHARRKGITDEEAEKLVNQAIEQAINILEQRTIDE*
JGI24709J26583_101830062	3300002173	Biogas Fermentantion	MPDIKKVIEGLELIEAVIPSYKHARHKGLTDDEAETVVNWALEQAIMILEQLRRDMYRR*
JGI24710J26742_100802214	3300002174	Biogas Fermentantion	MDIKKVIEGLELIETVTPSYKHARRRGMTDNEAETVVNWAVEQAIIILEQLIGATDE
JGI24710J26742_101836963	3300002174	Biogas Fermentantion	IKKVIEGLELIEAVIPSYKHARHKGLTDDEAETLVNQSIEQSIAILETIVARDKQSGTNAKEA*
draft_101122323	3300002898	Biogas Fermenter	MPDIKKVIEGLELIEAVIPSYKHARHKGLTDDEAETVVSWALEQALILLEQLRRDMYRR*
draft_102576551	3300002898	Biogas Fermenter	MSDIKKVTEGLELIEIVVPSYKHARRKGLTDDEAETLVNWALEQAIIILEQLIGATDE*
draft_103784522	3300002898	Biogas Fermenter	MSDIKEVIEGLEMIEIVIPSYKHARRKGLTDDEAETMVDLAVEQAIVLLEQLYAGQCNGDGEC*
draft_104255162	3300002898	Biogas Fermenter	MSDIKKVVEGLELIETVVPSYKYARRRGLTDDEAETLVDWALEQAIVLLEQLRRAMYGRDAEWD*
draft_104554612	3300002898	Biogas Fermenter	MYDIKEVIEGLELIEIVIPSYKYARRRGLTDDEAETLVNQSIEQSIAILETIVARDKQSGTNAKKD*
LSCM3L_10083204	3300003667	Coalbed Water	MDIKKVVEGLELIETVTPSYKHARRRDMTDEEAETAVNWALEQAIIILEQLIGATDE*
LSCM3L_10158162	3300003667	Coalbed Water	MSDIKKVIEGLELIETVIPSYKHARHKGITDDEAETVVNWAVEQAIILLEQLIGATDG*
LSCM3L_10244912	3300003667	Coalbed Water	LEGKGLRVMSDIEKIIEGLELIEIVVPSYKHARRKGITDEEAEKLVNQAIEQAINILEQRTIDE*
Ga0076946_1091683	3300005730	Food Waste	MSDIKKVIEGLELIEIVIPSYKHARRKGITDEEAEKLVNQAIEQSIAILETIVARDK*
Ga0101770_10472966	3300006674	Food Waste	LEGKGLRVMSDIEKVIEGLELIEIVVPSYKHARRKGITDEEAEKLVNQAIEQAINILEQRTIDE*
Ga0101770_10472979	3300006674	Food Waste	MSDIEKIIEGLELIEIVVPSYKHARRKGMSDDEAETLVNWALEQAINILEQRTIDE*
Ga0101790_1145771	3300006840	Anaerobic Reactor	LEGKGLRVMSDIEKIIEGLTLIEVAIPSYKYARRKGMTDEEAEELVYQAIEQAINILEQRTIDE
Ga0101790_1153081	3300006840	Anaerobic Reactor	MYDIKKVIEGLELIETVVPSYKYARRRGMTDNEAETLVDWALEQAIVLLEQLIGATEE*
Ga0118671_10562713	3300009121	Anaerobic Wastewater Sludge	MYDIKKVIEGLELIETVTPSYKHARRRGMTDEEAETAVDWALEQAIIILEQLIGATDE*
Ga0118672_11818721	3300009360	Anaerobic Wastewater Sludge	MSDIKEVIEGLELIETVIPSYKHARHKGITDDEAETVVNWAVEQAIILLEQLR
Ga0118673_10070216	3300009362	Anaerobic Wastewater Sludge	MDIKKVIEGLELIETVTPSYKHARRRGMTDNEAETAVNWALEQAIILLEQLIGATDE*
Ga0118673_10634371	3300009362	Anaerobic Wastewater Sludge	MSDIKEVIEGLELIETVIPSYKHARHKGITDDEAETVVNWAVEQAIIL
Ga0123327_11053784	3300009607	Anaerobic Biogas Reactor	MYDIKKVIEGLELIETVTPSYKHARRRGMTDNEAETAVNWALEQAIILLEQLIGATDE*
Ga0123327_11376302	3300009607	Anaerobic Biogas Reactor	MDIKKVIEGLELIETVTPSYKHARRRGMTDEEAETAVDWALEQAIIILEQLIGATDE*
Ga0123331_12135052	3300009642	Anaerobic Biogas Reactor	MSDIKKVIEGLELIEIVIPSYKHARRKGITDEEAEKLVNQAIEQAIIILEQLIGATDE*
Ga0123326_10553032	3300009647	Anaerobic Biogas Reactor	MSDIKKVIEGLELIETVVPSYKHARHKGITDDEAETVVNWAVGQAIILLEQLRRSL*
Ga0123326_11761653	3300009647	Anaerobic Biogas Reactor	LELIETVTPSYKHARRRGMTDEEAETAVDWALEQAIIILEQLIGATDE*
Ga0123330_13399591	3300009652	Anaerobic Biogas Reactor	MDIKKVIEGLELIETVTPSYKHARRKGLTDDEAETVVNWALEQAIILLEQLRRSVFKMRRR*
Ga0116169_11970653	3300009653	Anaerobic Digestor Sludge	MTEIEKIIEGLELIETVIPSYKLARRKGIADDQAEKQVVEALDRAIYLLEQIKKITA*
Ga0116167_11315253	3300009654	Anaerobic Digestor Sludge	MSDIKEVIEGLELIEIVVPSYKHARRKGLTDDEAETVVNWALEQAINILEQRTIDE*
Ga0116179_11432261	3300009657	Anaerobic Digestor Sludge	LSDIKKVVEGLELIEIVIPSYKHARRKGLTDEEAETVVNWAVEQAIILLEQIKEGKELCL
Ga0116179_12583001	3300009657	Anaerobic Digestor Sludge	MSDIEKVIEGLELIEIVVPSYKHARRKGLTDEEAEKLVNQAIEQAIIILEQLIGAMYSKEIMSLE*
Ga0116179_12638292	3300009657	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVIPSYKHARRKGLTDDEAETLVNQAIEQSIAILETIVARDK*
Ga0123328_10026061	3300009659	Anaerobic Biogas Reactor	MSDIKEVIEGLDLIETVIPSYKRARRKGLTDDEAETVVNWALEQAIILLEQLIGAMY
Ga0123328_11753731	3300009659	Anaerobic Biogas Reactor	MSDIKKVVEGLELIEIVIPSYKHARRKGLTDDEAETVVNWALEQAIILLEQ
Ga0116181_10822683	3300009663	Anaerobic Digestor Sludge	MSNDNDIEKIIEGLEMIETAIPSYKYARRRGMTDNEAETLIDWALEQAIIILEQLIGATEE*
Ga0116181_11130932	3300009663	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVIPSYKHARRKGLTDDEAETLVNWALEQAIIILETIVARDKQSGTNA*
Ga0116180_10920401	3300009668	Anaerobic Digestor Sludge	MFDIEKIIEGLELIEIVVPSYKHARRKGLTDEEAETVVNWALEQAIILLEQIKEGKE
Ga0116180_12004523	3300009668	Anaerobic Digestor Sludge	LSDIKKVVEGLELIEIVIPSYKHARRKGSTDEEAEKLVNQAIEQSIAILETIVARDK*
Ga0116180_12045071	3300009668	Anaerobic Digestor Sludge	LSDIKKVVEGLELIEIVVPSYKHARRKGLTDEEAETAVNWAVEQAIILL
Ga0123334_12232061	3300009671	Anaerobic Biogas Reactor	GMSDIKEVIEGLELIETVIPSYKHARHKGITDDEAETVVNLAVEQAIILLEQLIGATDE*
Ga0123335_13591371	3300009680	Anaerobic Biogas Reactor	MERPPIESIIEGLELIETVIPSYKHARHKGITDDEAETVVNWAVEQAIILLEQLRRA
Ga0116172_103440012	3300009682	Anaerobic Digestor Sludge	MSDIKKVIEGLELIETAIPSYKHARRKGITDDEAETVVNWALEQAIVLLEQLRRAMYGRDAK*
Ga0116192_10244904	3300009710	Anaerobic Digestor Sludge	MSDIKKVIEGLELIEIVIPSYKHARRKGITDEEAEKLVNQAIEQAINILEQRTIDE*
Ga0116192_10381562	3300009710	Anaerobic Digestor Sludge	MSDIEKVIEGLELIEIVVPSYKHARRKGITDEEAEKLVNQAIEQSIAILETIVARDK*
Ga0116165_11538443	3300009712	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVVPSYKHARRKGITDEEADAVVSWALEQVIIILEQLRRAMYSKENT
Ga0116165_12358801	3300009712	Anaerobic Digestor Sludge	MSDIKKVIEGLELIETVIPSYKHARRKGLTDDEAETLVNWALEQTIIILEQLITIPCCEDCPC
Ga0116168_11445263	3300009761	Anaerobic Digestor Sludge	MSDIKEVIEGLELIETVIPSYKHARRKGLTDDEAETVVNWAVEQAIILLEQLIGATDE*
Ga0116246_100776243	3300010327	Anaerobic Digestor Sludge	VIEGLELIETVIPSYKHARHKGITNDEAETVVNLAVEQAIILLEQLIGATDE*
Ga0116246_103765161	3300010327	Anaerobic Digestor Sludge	LRNHPAQDGRIGIEKIIEGLELIEIVIPSYKHARRKGLTDDEAETVVNWALEQAIILLEQIKEGKELCL*
Ga0116245_100140112	3300010338	Anaerobic Digestor Sludge	MSNDNDIEKIIEGLELIEIVVPSYKYARRKGMSDDEADAVVDWALKQAIVLLEQLIGATSDE*
Ga0116245_100984482	3300010338	Anaerobic Digestor Sludge	MSDIKEVIEGLELIEIVVPSYKHARRKGLTDDEAETVVSWALEQAINILEQRTIDE*
Ga0116245_101263643	3300010338	Anaerobic Digestor Sludge	MSDIKEVIEGLELIEIVVPSYKHARRKGITDEEAETLVNWALEQAIILLEQIKEGKELCL
Ga0116250_100660146	3300010340	Anaerobic Digestor Sludge	MSDIKKVIEGLELIEIVVPSYKHARRKGLTDDEAETLVNWALEQAINILEQRTIDE*
Ga0116250_101728853	3300010340	Anaerobic Digestor Sludge	LSDIKKVVEGLELIEIVIPSYKHARRKGLTDEEAEKLVNQAIEQSIAILETIVARDK*
Ga0116250_101917983	3300010340	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVIPSYKHARRKGLTDEEAETAVNWAVEQAIILLEQIKEGKE
Ga0116250_103352424	3300010340	Anaerobic Digestor Sludge	MSDIEKVIEGLELIEIVVPSYKHARRKGMTDEEAETLVNWALEQAIILLEQ
Ga0116250_107647382	3300010340	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVVPSYKHARRKGITDEEAEKLVNQAIEQSIAILETIVARDK*
Ga0116255_105443373	3300010348	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVVPSYKHARRKGITDEEAEKLVNQAIEQSIA
Ga0153798_102094142	3300012949	Switchgrass Degrading	MSDIKKVIEGLELIETVIPSYKHARHKGITDDEAETVVNLAVEQAIILLEQLIGATDE*
Ga0172378_112944742	3300014203	Groundwater	MFDIKKVVEGLELIEIVIPSYKHARRKGLTDDEAETLVNQSIEQSIAILETIVARDKQSGTYVNEA*
Ga0209508_10261211	3300025471	Anaerobic Digestor Sludge	DIKEVIEGLELIETVIPSYKHARRKGLTDDEAETVVNWAVEQAIILLEQLIGATDE
Ga0209409_10639232	3300025589	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVVPSYKHARRKGITDEEAEKLVNQAIEQAINILEQRTIDE
Ga0209409_11379631	3300025589	Anaerobic Digestor Sludge	MSDIKKVIEGLELIETVIPSYKHARRKGLTDDEAETLVNWALEQAIIILEQLIGATDE
Ga0208825_11074322	3300025597	Anaerobic Digestor Sludge	MSDIKKVIEGLELIEIVIPSYKHARRKGITDEEAEKLVNQAIEQAINILEQRTIDE
Ga0209720_11189292	3300025605	Anaerobic Digestor Sludge	MSDIKEVIEGLELIEIVVPSYKHARRKGLTDDEAETVVNWALEQAINILEQRTIDE
Ga0209608_10042462	3300025609	Anaerobic Digestor Sludge	LRNHPAQDGRIGIEKIIEGLELIEIVIPSYKHARRKGLTDDEAETVVNWALEQAIILLEQIKEGKELCL
Ga0209608_11193591	3300025609	Anaerobic Digestor Sludge	RCFMTEIEKIIEGLELIETVIPSYKLARRKGLTDDEAETVVNWALEQAINILEQRTIVEGKEVE
Ga0208693_10023246	3300025618	Anaerobic Digestor Sludge	MSDIKKVIEGLELIEIVVPSYKHARRKGLTDDEAETLVNWALEQAINILEQRTIDE
Ga0208693_10210055	3300025618	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVVPSYKHARRKGLTDEEAEKLVNQAIEQAIIILEQLIGAMYSKEIMSLE
Ga0208693_10486152	3300025618	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVIPSYKHARRKGLTDDEAETLVNQAIEQSIAILETIVARDK
Ga0209204_10978261	3300025631	Anaerobic Digestor Sludge	MSNDNDIEKIIEGLELIEIVVPSYKYARRKGMSDDEAETLVNWAVEQAIIILE
Ga0208823_10311811	3300025657	Anaerobic Digestor Sludge	MSDIEKVIEGLELIEIVVPSYKHARRKGLTDEEAEKLVNQAIEQAIIILEQLIGAMYSKEIMSLE
Ga0208823_10851572	3300025657	Anaerobic Digestor Sludge	MSDIEKIIEGLELIEIVVPSYKHARRKGLTDEEAEKLVNQAIEQSIAILETIVARDK
Ga0208823_11663621	3300025657	Anaerobic Digestor Sludge	IECLELIETVTPSYKHARRRGMTDEEAETAVNWAVEQAIILLEQLIGATDE
Ga0208564_12036551	3300025683	Anaerobic Digestor Sludge	QDMYDIKEVIEGLEMIETIIPSYKYARRRGLTDDEAETLVNWALEQAIIILETIVARDKQSGTNAKKD
Ga0209509_100249912	3300026194	Anaerobic Biogas Reactor	MSDIKKVIEGLELIETVVPSYKHARHKGITDDEAETVVNWAVGQAIILLEQLRRSL
Ga0209509_10124929	3300026194	Anaerobic Biogas Reactor	MSDIKEVIEGLDLIETVIPSYKRARRKGLTDDEAETVVNWALEQAIILLEQLIGAMYSKENTTEG
Ga0209509_10166742	3300026194	Anaerobic Biogas Reactor	MYDIKKVIEGLELIETVTPSYKHARRRGMTDNEAETAVNWALEQAIILLEQLIGATDE
Ga0209509_10333502	3300026194	Anaerobic Biogas Reactor	MDIKKVIEGLELIETVTPSYKHARRRGMTDEEAETAVDWALEQAIIILEQLIGATDE
Ga0209509_10799091	3300026194	Anaerobic Biogas Reactor	MSDIKKVVEGLELIEIVIPSYKHARRKGLTDDEAETVVNWALEQAIILLEQLIGAMYSKENTTEG
Ga0209312_11014291	3300026195	Anaerobic Biogas Reactor	MSDIKKVIEGLELIEIVIPSYKHARRKGLTDDEAETLVNQSIEQSIAILETIVARD
Ga0209312_11632721	3300026195	Anaerobic Biogas Reactor	VERPPIESIIEGLELIEAVIPSYKHARRKGLTDDEAETVVNWALEQAIILLEQLIGAMYSKE
Ga0209313_10165836	3300026198	Anaerobic Biogas Reactor	MYDIKKVIEGLELIETVTPSYKHARRRGMTDEEAETAVDWALEQAIIILEQLIGATDE
Ga0209723_12527993	3300026311	Anaerobic Biogas Reactor	MSDIKKVVEGLELIEIVIPSYKHARRKGLTDDEAETVVNWALEQAIILLEQL
Ga0209723_12684272	3300026311	Anaerobic Biogas Reactor	MERPPIESIIEGLELIETVIPSYKHARHKGITDDEAETVVNWAVEQAIILL
Ga0209537_10132448	3300027510	Biogas Fermentantion	MSDIEKIIEGLELIEIVVPSYKHARRKGITDEEAEKLVNQAIEQAIIILEQLIGATDE
Ga0209537_10564823	3300027510	Biogas Fermentantion	MSDIKKVVEGLELIEIVIPSYKYARRKGLTDEEAEELVYQAIEQAINILEQRTIDE
Ga0209537_10689423	3300027510	Biogas Fermentantion	SDIEKVIEGLELIEIVIPSYKHARRKGITDEEAEKLVNQAIEQAINILEQRTIDE
(restricted) Ga0255343_11821552	3300028561	Wastewater	MSDIKKVIEGLELIETVIPSYKHARRKGLTDDEAETVVNLAVEQAIILLEQLIGATDE
Ga0373404_0137518_648_803	3300033757	Anaerobic Digester Leachate	IEGLDLIEIVVPSYKYARRKGLTDDDAEATVNWALKQAIIILEQLIGATDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters